cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1155/2016/8367534

Guitar: An R/Bioconductor Package for Gene Annotation Guided Transcriptomic Analysis of RNA-Related Genomic Features
Cited by: 75
Author(s): Xiaodong Cui, Zhen Wei, Lin Zhang, Hui Liu, Lei Sun, Shao Wu Zhang, Yufei Huang, Jia Meng
Software Mentions: 2
Published: over 10 years ago

10.7717/peerj.8160

Rediscovery of Osteocephalus vilarsi (Anura: Hylidae): an overlooked but widespread Amazonian spiny-backed treefrog
Cited by: 9
Author(s): Miquéias Ferrão, Jiří Moravec, Leandro João Carneiro de Lima Moraes, Vinícius T. de Carvalho, Marcelo Gordo, Albertina P. Lima
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-020-63252-9

GC-MS metabolomics reveals metabolic differences of the farmed Mandarin fish Siniperca chuatsi in recirculating ponds aquaculture system and pond
Cited by: 12
Author(s): Mingsong Xiao, Kelin Qian, Yuliang Wang, Fangyin Bao
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-63218-x

Larval Geoduck (Panopea generosa) Proteomic Response to Ciliates
Cited by: 5
Author(s): Emma Timmins‐Schiffman, José Ignacio Navarro Guzmán, Rhonda Elliott Thompson, Brent Vadopalas, Benoït Eudeline, Steven B. Roberts
Software Mentions: 2
Published: about 6 years ago

10.7717/peerj.8923

Dynamic changes in intestinal microbiota in young forest musk deer during weaning
Cited by: 6
Author(s): Yimeng Li, Minghui Shi, Tianxiang Zhang, Xin Hu, Baofeng Zhang, Sheng‐Quan Xu, Jianhong Ding, Defu Hu, Shuqiang Liu
Software Mentions: 2
Published: about 6 years ago

10.1155/2020/2159460

Potential Molecular Mechanism of the NPPB Gene in Postischemic Heart Failure with and without T2DM
Cited by: 1
Author(s): Yao-Zong Guan, Rui-Xing Yin, Guo-Xiong Deng, Peng-Fei Zheng, Chunxiao Liu, Bi-Liu Wei
Software Mentions: 2
Published: almost 6 years ago

10.1155/2020/6135060

Identification of 6 Hub Proteins and Protein Risk Signature of Colorectal Cancer
Cited by: 3
Author(s): Taohua Yue, Cheng Liu, Jing Zhu, Zhihao Huang, Shuqin Guo, Yuyang Zhang, Hao Xu, Yucun Liu, Pengyuan Wang, Shanwen Chen
Software Mentions: 2
Published: over 5 years ago

10.1155/2019/6706354

Integrative Analysis Reveals Comprehensive Altered Metabolic Genes Linking with Tumor Epigenetics Modification in Pan-Cancer
Cited by: 6
Author(s): Yahui Shi, Jinjia Wei, Zixi Chen, Yuhong Yuan, Xingsong Li, Yanyu Zhang, Yuhuan Meng, Yumin Hu, Hongli Du
Software Mentions: 2
Published: over 6 years ago

10.1155/2020/3650935

Sex Difference of Ribosome in Stroke-Induced Peripheral Immunosuppression by Integrated Bioinformatics Analysis
Cited by: 8
Author(s): Jianqin Xie, Lu Yapeng, Hongli Sun, Lina Gao, Peipei Song, Zhijun Feng, Chongge You
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-62873-4

Basilar artery dolichosis is associated with a poor 90-day outcome in acute isolated pontine infarction
Cited by: 6
Author(s): Shugang Cao, Xiaoxing Ni, Qian Wu, J. He, Ping Cui, Tingting Ge, Yuancheng Li, Jian Wang, X U Wen'an, Mingwu Xia
Software Mentions: 2
Published: about 6 years ago

10.1038/s41437-021-00416-x

The recombination landscape and multiple QTL mapping in a Solanum tuberosum cv. ‘Atlantic’-derived F1 population
Cited by: 7
Author(s): Guilherme da Silva Pereira, Marcelo Mollinari, Mitchell J. Schumann, M. E. Clough, Zhao‐Bang Zeng, G. Craig Yencho
Software Mentions: 2
Published: over 5 years ago

10.7717/peerj.494

RIM-DB: a taxonomic framework for community structure analysis of methanogenic archaea from the rumen and other intestinal environments
Cited by: 125
Author(s): Henning Seedorf, Sandra Kittelmann, Gemma Henderson, Peter H. Janssen
Software Mentions: 2
Published: almost 12 years ago

10.1371/journal.pone.0238950

Peel-1 negative selection promotes screening-free CRISPR-Cas9 genome editing in Caenorhabditis elegans
Cited by: 4
Author(s): Troy A. McDiarmid, Vinci Au, Donald G. Moerman, Catharine H. Rankin
Software Mentions: 2
Published: over 5 years ago

10.1172/jci.insight.139032

Pathogenic, glycolytic PD-1+ B cells accumulate in the hypoxic RA joint
Cited by: 36
Author(s): Achilleas Floudas, Nuno Neto, Viviana Marzaioli, Kieran Murray, Barry Moran, Michael G. Monaghan, Candice Low, Ronan Mullan, Navin Rao, Vinod Krishna, Sunil Nagpal, Douglas J. Veale, Ursula Fearon
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-63993-7

Decline of the boreal willow grouse (Lagopus lagopus) has been accelerated by more frequent snow-free springs
Cited by: 15
Author(s): Markus Melin, Lauri Mehtätalo, Pekka Helle, Katja Ikonen, Tuula Packalen
Software Mentions: 2
Published: about 6 years ago

10.1186/s12917-019-1993-7

Comparison of gut microbiota diversity between wild and captive bharals (Pseudois nayaur)
Cited by: 26
Author(s): Xiaowei Chi, Hongmei Gao, Guosheng Wu, Wen Qin, Pengfei Song, Lei Wang, Jiarui Chen, Zhenyuan Cai, Tongzuo Zhang
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-020-63190-6

Influence of oil, dispersant, and pressure on microbial communities from the Gulf of Mexico
Cited by: 12
Author(s): Nuttapol Noirungsee, Steffen Hackbusch, Juan Viamonte, Paul Bubenheim, Andreas Liese, Rudolf Müller
Software Mentions: 2
Published: about 6 years ago

10.7717/peerj.2910

The wild tomato speciesSolanum chilenseshows variation in pathogen resistance between geographically distinct populations
Cited by: 21
Author(s): Remco Stam, Daniela Scheikl, Aurélien Tellier
Software Mentions: 2
Published: over 9 years ago

10.1128/AAC.00209-18

Heavy Metal Susceptibility of Escherichia coli Isolated from Urine Samples from Sweden, Germany, and Spain
Cited by: 25
Author(s): Stefan Sütterlin, Carlos J. Téllez-Castillo, Leticia Anselem, Huan Yin, James E. Bray, Martin C. J. Maiden
Software Mentions: 2
Published: about 8 years ago

10.1186/s12917-019-1988-4

Characterization of functional traits with focus on udder health in heifers with divergent paternally inherited haplotypes on BTA18
Cited by: 11
Author(s): A. Heimes, J. Brodhagen, Rosemarie Weikard, H.M. Hammon, M. Meyerholz, Wolfram Petzl, Holm Zerbe, Susanne Engelmann, Marion Schmicke, Martina Hoedemaker, H. J. Schuberth, Christa Kühn
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-020-64470-x

Additive Genetic Behavior of Stem Solidness in Wheat (Triticum aestivum L.)
Cited by: 7
Author(s): Naresh Kumar Bainsla, R. K. Yadav, Gyanendra Pratap Singh, Ram Kumar Sharma
Software Mentions: 2
Published: about 6 years ago

10.1186/s12917-018-1711-x

Aspirin eugenol ester regulates cecal contents metabolomic profile and microbiota in an animal model of hyperlipidemia
Cited by: 19
Author(s): Ning Ma, Xi-Wang Liu, Xiaojun Kong, Shihong Li, Zeng-Hua Jiao, Zhe Qin, Yajun Yang, Jianyong Li
Software Mentions: 2
Published: over 7 years ago

10.1002/ajb2.1676

Resolving species boundaries in a recent radiation with the Angiosperms353 probe set: the Lomatium packardiae/L. anomalum clade of the L. triternatum (Apiaceae) complex
Cited by: 10
Author(s): Michael V. Ottenlips, Donald H. Mansfield, Sven Buerki, Mary Ann Feist, Stephen R. Downie, Steven Dodsworth, Félix Forest, Gregory M. Plunkett, James F. Smith
Software Mentions: 2
Published: about 5 years ago

10.1186/s12917-019-2006-6

Metabolic derangements and reduced survival of bile-extracted Asiatic black bears (Ursus thibetanus)
Cited by: 9
Author(s): Monica Kaho Herkules Bando, O. Lynne Nelson, Clark Kogan, Rance K. Sellon, Michelle M. Wiest, Heather Bacon, Mandala Hunter-Ishikawa, Wendy Leadbeater, Koji Yamazaki, Yipeng Jin, Takeshi Komatsu, David McGeachy
Software Mentions: 2
Published: almost 7 years ago

10.1186/1752-0509-9-S3-S5

A knowledge base for Vitis vinifera functional analysis
Cited by: 13
Author(s): Alfredo Pulvirenti, Rosalba Giugno, Rosario Distefano, Giuseppe Pigola, Misael Mongiovì, Girolamo Giudice, Vera Vendramin, Alfio Lombardo, Federica Cattonaro, Alfredo Ferro
Software Mentions: 2
Published: over 11 years ago

10.7717/peerj.8176

Systematic evaluation of the gut microbiome of swamp eel (Monopterus albus) by 16S rRNA gene sequencing
Cited by: 6
Author(s): Xuan Chen, Shouguo Fang, Lili Wei, Qiuyan Zhong
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0166147

SLC7A5 Functions as a Downstream Target Modulated by CRKL in Metastasis Process of Gastric Cancer SGC-7901 Cells
Cited by: 13
Author(s): Junqing Wang, Xiaochun Fei, Wenjun Wu, Xuehua Chen, Liping Su, Zhenggang Zhu, Yunyun Zhou
Software Mentions: 2
Published: over 9 years ago

10.3390/ijms22147596

Integration of Transcriptome and Metabolome Reveals the Genes and Metabolites Involved in Bifidobacterium bifidum Biofilm Formation
Cited by: 15
Author(s): Zongmin Liu, Lingzhi Li, Zhifeng Fang, Yuan‐Kun Lee, Jianxin Zhao, Hao Zhang, Wei Chen, Haitao Li, Wenwei Liu
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-65272-x

Histone H3K27M Mutation Overrides Histological Grading in Pediatric Gliomas
Cited by: 38
Author(s): Amal Mosaab, Moatasem El‐Ayadi, Eman Khorshed, Nada Amer, Amal Refaat, Mohamed El-Beltagy, Zeinab Hassan, Sameh H. Soror, Mohamed S. Zaghloul, Shahenda El‐Naggar
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-65253-0

Microbiota in vitro modulated with polyphenols shows decreased colonization resistance against Clostridioides difficile but can neutralize cytotoxicity
Cited by: 11
Author(s): Aleksander Mahnič, Jennifer M. Auchtung, Nataša Poklar Ulrih, Robert A. Britton, Maja Rupnik
Software Mentions: 2
Published: about 6 years ago

10.1172/jci.insight.146707

Hedgehog-induced PD-L1 on tumor-associated macrophages is critical for suppression of tumor-infiltrating CD8+ T cell function
Cited by: 42
Author(s): Amy J. Petty, Rui Dai, Rosa Lapalombella, Robert A. Baiocchi, Don M. Benson, Zihai Li, Xin Huang, Yiping Yang
Software Mentions: 2
Published: over 5 years ago

10.1186/s13104-017-2824-1

Low toxicity and favorable clinical and quality of life impact after non-myeloablative autologous hematopoietic stem cell transplant in Crohn’s disease
Cited by: 18
Author(s): Milton Artur Ruiz, Roberto Luiz Kaiser, Luiz Gustavo de Quadros, Lílian Piron-Ruiz, Tatiana Peña-Arciniegas, Mikaell Alexandre Gouvêa Faria, Rubens Camargo Siqueira, Flavio Fontes Pirozzi, Fernanda Soubhia Liedtke Kaiser, Richard K. Burt
Software Mentions: 2
Published: over 8 years ago

10.1186/s13104-021-05463-5

Effects of short-term methionine and cysteine restriction and enrichment with polyunsaturated fatty acids on oral glucose tolerance, plasma amino acids, fatty acids, lactate and pyruvate: results from a pilot study
Cited by: 8
Author(s): Trond E. Olsen, Bente Øvrebø, Cheryl Turner, Nasser E. Bastani, Helga Refsum, Kathrine J. Vinknes
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0233945

The transcriptome of Listeria monocytogenes during co-cultivation with cheese rind bacteria suggests adaptation by induction of ethanolamine and 1,2-propanediol catabolism pathway genes
Cited by: 14
Author(s): Justin M. Anast, Stephan Schmitz‐Esser
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-65215-6

Lipid Mediator Profiles Predict Response to Therapy with an Oral Frankincense Extract in Relapsing-Remitting Multiple Sclerosis
Cited by: 3
Author(s): Klarissa Hanja Stürner, Oliver Werz, Andreas Koeberle, Markus Otto, Ole Pleß, Frank Leypoldt, Friedemann Paul, Christoph Heesen
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0252273

Multivariate visualization of the global COVID-19 pandemic: A comparison of 161 countries
Cited by: 11
Author(s): Jane Kimm Lii Teh, D.A. Bradley, Jack Bee Chook, Kee Huong Lai, Woo Teck Ang, Kok Lay Teo, Suat‐Cheng Peh
Software Mentions: 2
Published: about 5 years ago

10.3390/pathogens10091117

Screening of Dietary Ingredients against the Honey Bee Parasite Nosema ceranae
Cited by: 13
Author(s): Chiara Braglia, Daniele Alberoni, Martín Pablo Porrini, Melisa Paula Garrido, Loredana Baffoni, Diana Di Gioia
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-66016-7

miR-379 links glucocorticoid treatment with mitochondrial response in Duchenne muscular dystrophy
Cited by: 14
Author(s): M. Sanson, Ai Vu Hong, Emmanuelle Massouridès, Nathalie Bourg, Laurence Suel, Fatima Amor, Guillaume Corre, Paule Bénit, I. Barthélémy, Stéphane Blot, Anne Bigot, Christian Pinset, Pierre Rustin, Laurent Servais, Thomas Voït, Isabelle Richard, David Israeli
Software Mentions: 2
Published: about 6 years ago

10.3390/pathogens10091183

Nanopore-Based Surveillance of Zoonotic Bacterial Pathogens in Farm-Dwelling Peridomestic Rodents
Cited by: 7
Author(s): Nusrat Jahan, Laramie L. Lindsey, Evan J. Kipp, Adam Reinschmidt, Brad Heins, Amy M. Runck, Peter A. Larsen
Software Mentions: 2
Published: almost 5 years ago

10.1186/1756-0500-7-440

Evolutionary and sequence-based relationships in bacterial AdoMet-dependent non-coding RNA methyltransferases
Cited by: 13
Author(s): Jeanneth Mosquera-Rendón, Sonia Cárdenas-Brito, Juan D Pineda, Mauricio Corredor, Alfonso Benı́tez-Páez
Software Mentions: 2
Published: almost 12 years ago

10.1172/jci.insight.149217

A map of metabolic phenotypes in patients with myalgic encephalomyelitis/chronic fatigue syndrome
Cited by: 15
Author(s): Fredrik Hoel, August Hoel, Ina Katrine Nitschke Pettersen, Ingrid Gurvin Rekeland, Kristin Risa, Kine Alme, Kari Sørland, Alexander Fosså, Katarina Lien, Ingrid Herder, Hanne Thürmer, Merethe Otelie Eide Gotaas, Christoph Schäfer, Rolf K. Berge, Kristian Sommerfelt, Hans-Peter Marti, Olav Dahl, Olav Mella, Øystein Fluge, Karl Johan Tronstad
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-66151-1

Oculomotor behavior tracks the effect of ideological priming on deception
Cited by: 10
Author(s): Michael Schepisi, Giuseppina Porciello, Salvatore Maria Aglioti, Maria Serena Panasiti
Software Mentions: 2
Published: about 6 years ago

10.1186/s13104-021-05657-x

Time-course transcriptome analysis of host cell response to poxvirus infection using a dual long-read sequencing approach
Cited by: 4
Author(s): Zoltán Maróti, Dóra Tombácz, István Prazsák, Norbert Moldován, Zsolt Csabai, Gábor Torma, Zsolt Balázs, Tibor Kalmár, Béla Dénes, M Snyder, Zsolt Boldogkői
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0196440

The ecology of the Drosophila-yeast mutualism in wineries
Cited by: 32
Author(s): Allison S. Quan, Michael B. Eisen
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-020-66607-4

Taxonomic and Functional Differences in Cervical Microbiome Associated with Cervical Cancer Development
Cited by: 31
Author(s): Charles Nkufi Tango, Seung‐Woo Seo, Minji Kwon, Dong-Ock Lee, Ha Kyun Chang, Mi Kyung Kim
Software Mentions: 2
Published: about 6 years ago

10.3390/ijms22157847

Cytokine-Laden Extracellular Vesicles Predict Patient Prognosis after Cerebrovascular Accident
Cited by: 3
Author(s): Anthony Fringuello, Philip D. Tatman, Tadeusz H. Wroblewski, John A. Thompson, Xiaoli Yu, Kevin O. Lillehei, Robert G. Kowalski, Michael W. Graner
Software Mentions: 2
Published: almost 5 years ago

10.3390/pathogens9110888

Genomic Features and Evolution of the Parapoxvirus during the Past Two Decades
Cited by: 4
Author(s): Xiaoting Yao, Ming Pang, Tianxing Wang, Xi Chen, Xidian Tang, Jianjun Chang, Dekun Chen, Wentao Ma
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-66713-3

Epstein-Barr virus reactivation in sepsis due to community-acquired pneumonia is associated with increased morbidity and an immunosuppressed host transcriptomic endotype
Cited by: 12
Author(s): Cyndi Goh, Katie L Burnham, Azim Ansari, Mariateresa de Cesare, Tanya Golubchik, Paula Hutton, Lauren Overend, Emma E Davenport, C. J. Hinds, Rory Bowden, Julian C. Knight
Software Mentions: 2
Published: about 6 years ago

10.1186/s13104-018-3534-z

Modes of mechanical ventilation vary between hospitals and intensive care units within a university healthcare system: a retrospective observational study
Cited by: 14
Author(s): Craig S. Jabaley, Robert F. Groff, Milad Sharifpour, Jayashree Raikhelkar, James M. Blum
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-020-66704-4

Acyl homoserine lactone-mediated quorum sensing in the oral cavity: a paradigm revisited
Cited by: 25
Author(s): Andrea Muras, Paz Otero-Casal, Vanessa Blanc, Ana Otero
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-66290-5

Dimethylsulfoniopropionate concentration in coral reef invertebrates varies according to species assemblages
Cited by: 14
Author(s): Isis Guibert, Flavien Bourdreux, Isabelle Bonnard, Xavier Pochon, Vaimiti Dubousquet, Phila Raharivelomanana, Véronique Berteaux‐Lecellier, Gaël Lecellier
Software Mentions: 2
Published: about 6 years ago

10.1186/s12889-020-09401-1

Bayesian spatial analysis of socio-demographic factors influencing pregnancy termination and its residual geographic variation among ever-married women of reproductive age in Bangladesh
Cited by: 1
Author(s): Rifat Zahan, Cindy Feng
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-66919-5

Identification and age-dependence of pteridines in bed bugs (Cimex lectularius) and bat bugs (C. pipistrelli) using liquid chromatography-tandem mass spectrometry
Cited by: 5
Author(s): Jana Křemenová, Ondřej Balvín, Oliver Otti, Michal Pavonič, Klaus Reinhardt, Zdeněk Šimek, Tomáš Bartonička
Software Mentions: 2
Published: almost 6 years ago

10.1172/jci.insight.140364

Lenvatinib halts aortic aneurysm growth by restoring smooth muscle cell contractility
Cited by: 11
Author(s): Albert Busch, Jessica Pauli, Greg Winski, Sonja Bleichert, Ekaterina Chernogubova, Susanne Metschl, Hanna Winter, Matthias Trenner, Armin Wiegering, Christoph Otto, Johannes Fischer, Judith Reiser, Julia Werner, Joy Roy, Christine Brostjan, Christoph Knappich, Hans‐Henning Eckstein, Valentina Paloschi, Lars Maegdefessel
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12889-021-10764-2

Revisiting the continuum of resistance model in the digital age: a comparison of early and delayed respondents to the Norwegian counties public health survey
Cited by: 4
Author(s): Benjamin Clarsen, Jens Christoffer Skogen, Thomas Sevenius Nilsen, Leif Edvard Aarö
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0153631

The Complete Female- and Male-Transmitted Mitochondrial Genome of Meretrix lamarckii
Cited by: 36
Author(s): Stefano Bettinazzi, Federico Plazzi, Marco Passamonti
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0186901

Adaptation to dislodgement risk on wave-swept rocky shores in the snail Littorina saxatilis
Cited by: 32
Author(s): Guénolé Le Pennec, Roger K. Butlin, Per R. Jonsson, Ann I. Larsson, Jessica Lindborg, Erik Bergström, Anja M. Westram, Kerstin Johannesson
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-020-73706-9

MicroRNA dynamics during hibernation of the Australian central bearded dragon (Pogona vitticeps)
Cited by: 3
Author(s): Alexander Capraro, Denis O’Meally, Shafagh A. Waters, Hardip R. Patel, Arthur Georges, Paul D. Waters
Software Mentions: 2
Published: over 5 years ago

10.3390/pathogens9060421

Quantification of the Animal Tuberculosis Multi-Host Community Offers Insights for Control
Cited by: 29
Author(s): Nuno Santos, Céline Richomme, Telmo Nunes, Joaquı́n Vicente, Paulo C. Alves, José de la Fuente, Margarida Correia-Neves, Maria‐Laura Boschiroli, Richard J. Delahay, Christian Gortázar
Software Mentions: 2
Published: about 6 years ago

10.1186/s13195-021-00881-w

Visuospatial alpha and gamma oscillations scale with the severity of cognitive dysfunction in patients on the Alzheimer’s disease spectrum
Cited by: 11
Author(s): Alex I. Wiesman, Daniel L. Murman, Pamela E. May, Mikki Schantell, Sara L. Wolfson, Craig M. Johnson, Tony W. Wilson
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12889-019-7018-4

Urban-rural-specific trend in prevalence of general and central obesity, and association with hypertension in Chinese adults, aged 18–65 years
Cited by: 41
Author(s): Chi Shen, Zhongliang Zhou, Sha Lai, Xingxing Tao, Dantong Zhao, Wanyue Dong, Dan Li, Lan X, Jianmin Gao
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0172132

Salient object changes influence overt attentional prioritization and object-based targeting in natural scenes
Cited by: 10
Author(s): Nicola Anderson, Mieke Donk
Software Mentions: 2
Published: over 9 years ago

10.1002/advs.201902295

Developmentally Engineered Callus Organoid Bioassemblies Exhibit Predictive In Vivo Long Bone Healing
Cited by: 86
Author(s): Gabriella Nilsson Hall, Luís Mendes, Charikleia Gklava, Liesbet Geris, Frank P. Luyten, Ioannis Papantoniou
Software Mentions: 2
Published: over 6 years ago

10.1186/s12889-018-6121-2

Simple and rationale-providing SMS reminders to promote accelerometer use: a within-trial randomised trial comparing persuasive messages
Cited by: 3
Author(s): Matti Toivo Juhani Heino, Keegan Knittle, Ari Haukkala, Tommi Vasankari, Nelli Hankonen
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0070405

The Conservation and Management of Tunas and Their Relatives: Setting Life History Research Priorities
Cited by: 30
Author(s): Maria José Juan‐Jordá, Iago Mosqueira, Juan Freire, Nicholas K. Dulvy
Software Mentions: 2
Published: almost 13 years ago

10.1038/s41598-020-75591-8

Variation of rhizosphere bacterial community diversity in the desert ephemeral plant Ferula sinkiangensis across environmental gradients
Cited by: 3
Author(s): Tao Zhang, Zhongke Wang, Xinhua Lv, Hanli Dang, Zhuang Li
Software Mentions: 2
Published: over 5 years ago

10.1186/s40359-021-00534-5

Predictive factors of quality of life among medical students: results from a multicentric study
Cited by: 14
Author(s): Antonia Celene Miguel, Patrícia Zen Tempski, Renata Kobayasi, Fernanda Brenneisen Mayer, Mílton A. Martins
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-75437-3

The Fuchs corneal dystrophy-associated CTG repeat expansion in the TCF4 gene affects transcription from its alternative promoters
Cited by: 9
Author(s): Alex Sirp, K. Costa Morais Leite, Jürgen Tuvikene, Kaja Nurm, Mari Sepp, Tõnis Timmusk
Software Mentions: 2
Published: over 5 years ago

10.1186/s12888-015-0559-x

Skating on thin ice: pragmatic prescribing for medication refractory schizophrenia
Cited by: 14
Author(s): Derek K. Tracy, Dan W. Joyce, S. Sarkar, Maria Jesus Mateos Fernandez, Sukhwinder S. Shergill
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12967-021-03043-6

Transcriptomic analysis of tumor tissues and organoids reveals the crucial genes regulating the proliferation of lung adenocarcinoma
Cited by: 15
Author(s): Xiao Ma, Sheng Yang, Hesheng Jiang, Yujie Wang, Zhen Xiang
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-020-75759-2

Proteomics reveals the preliminary physiological states of the spotted seal (Phoca largha) pups
Cited by: 5
Author(s): Jing Tian, Jing Du, Jingfeng Han, Xiangbo Bao, Xinran Song, Zengkui Lu
Software Mentions: 2
Published: over 5 years ago

10.1016/j.jaci.2017.08.044

Biallelic interferon regulatory factor 8 mutation: A complex immunodeficiency syndrome with dendritic cell deficiency, monocytopenia, and immune dysregulation
Cited by: 56
Author(s): Venetia Bigley, Sheetal Maisuria, Urszula Cytlak, Laura Jardine, Matthew A. Care, Kile Green, Merry Gunawan, Paul Milne, Rachel Dickinson, Sarah Wiscombe, David Parry, Rainer Döffinger, Arian Laurence, Claudia Fonseca, Oda Stoevesandt, Andrew R. Gennery, Andrew J. Cant, Reuben Tooze, A. John Simpson, Sophie Hambleton, Sinisa Savic, Gina M. Doody, Matthew Collin
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-020-75990-x

Plasmopara viticola infection affects mineral elements allocation and distribution in Vitis vinifera leaves
Cited by: 17
Author(s): Stefano Cesco, Anna Tolotti, Stefano Nadalini, Stefano Rizzi, Fabio Valentinuzzi, Tanja Mimmo, Carlo Porfido, Ignazio Allegretta, O. Giovannini, Michele Perazzolli, G. Cipriáni, Roberto Terzano, I. Pertot, Youry Pii
Software Mentions: 2
Published: over 5 years ago

10.1016/j.algal.2019.101446

Improving electrocoagulation floatation for harvesting microalgae
Cited by: 35
Author(s): Andrew Landels, Tracey A. Beacham, Claire Evans, Giorgia Carnovale, Sofia Raikova, Isobel S. Cole, Paul Goddard, Christopher J. Chuck, Michael J. Allen
Software Mentions: 2
Published: about 7 years ago

10.3389/fpls.2020.562001

Functional Allium fistulosum Centromeres Comprise Arrays of a Long Satellite Repeat, Insertions of Retrotransposons and Chloroplast DNA
Cited by: 5
Author(s): Ilya Kirov, Sergey Odintsov, Murad Omarov, Sofya Gvaramiya, Pavel Merkulov, Maxim Dudnikov, Aleksey Ermolaev, Katrijn Van Laere, A. A. Soloviev, Ludmila Khrustaleva
Software Mentions: 2
Published: over 5 years ago

10.1093/g3journal/jkaa035

Insights from the reanalysis of high-throughput chemical genomics data for Escherichia coli K-12
Cited by: 1
Author(s): Peter I-Fan Wu, Curtis Ross, Deborah A. Siegele, James C. Hu
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-76085-3

Phenotype prediction and characterization of 25 pharmacogenes in Thais from whole genome sequencing for clinical implementation
Cited by: 11
Author(s): John Mauleekoonphairoj, Montri Chamnanphon, Apichai Khongphatthanayothin, Boosamas Sutjaporn, Pharawee Wandee, Yong Poovorawan, Koonlawee Nademanee, Monnat Pongpanich, Pajaree Chariyavilaskul
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-76019-z

On the correlation between material-induced cell shape and phenotypical response of human mesenchymal stem cells
Cited by: 16
Author(s): Aliaksei Vasilevich, Steven Vermeulen, Marloes M. J. Kamphuis, Nadia Roumans, Said Eroumé, Dennie G. A. J. Hebels, Jeroen van de Peppel, Rika Reihs, Nick R. M. Beijer, Aurélie Carlier, Anne E. Carpenter, Shantanu Singh, Jan de Boer
Software Mentions: 2
Published: over 5 years ago

10.1245/s10434-021-09720-6

Impact of Smoking Status on Perioperative Morbidity, Mortality, and Long-Term Survival Following Transthoracic Esophagectomy for Esophageal Cancer
Cited by: 9
Author(s): Sivesh K Kamarajah, A Madhavan, Jakub Chmelo, M Navidi, Shajahan Wahed, A Immanuel, Nick Hayes, SM Griffin, Alexander W Phillips
Software Mentions: 2
Published: over 5 years ago

10.1245/s10434-020-09399-1

Chyle Leak Following Radical En Bloc Esophagectomy with Two-Field Nodal Dissection: Predisposing Factors, Management, and Outcomes
Cited by: 7
Author(s): Pamela Milito, Jakub Chmelo, Lorna Dunn, Sivesh K Kamarajah, A Madhavan, Shajahan Wahed, A Immanuel, S. M. Griffin, Alexander W Phillips
Software Mentions: 2
Published: over 5 years ago

10.1007/s40520-020-01683-0

What does hand motor function tell us about our aging brain in association with WMH?
Cited by: 8
Author(s): Misbah Riaz, Torgil Vangberg, Olena Vasylenko, Susana A. Castro-Chavira, Marta Maria Gorecka, Knut Waterloo, Claudia Rodríguez‐Aranda
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12888-021-03166-6

Factors related to age at depression onset: the role of SLC6A4 methylation, sex, exposure to stressful life events and personality in a sample of inpatients suffering from major depression
Cited by: 13
Author(s): Simon Sanwald, Katharina Widenhorn-Müller, Carlos Schönfeldt‐Lecuona, Christian Montag, Markus Kiefer
Software Mentions: 2
Published: about 5 years ago

10.3390/pathogens9110941

Molecular Typing of Neisseria gonorrhoeae Clinical Isolates in Russia, 2018–2019: A Link Between penA Alleles and NG-MAST Types
Cited by: 7
Author(s): Ilya Kandinov, Ekaterina Dementieva, Dmitry Kravtsov, А. В. Честков, А. А. Кубанов, В С Соломка, D. G. Deryabin, Dmitry Gryadunov, Boris Shaskolskiy
Software Mentions: 2
Published: over 5 years ago

10.1007/s13361-015-1269-9

High Resolution Mass Spectrometry of Polyfluorinated Polyether-Based Formulation
Cited by: 36
Author(s): Ian Ken D. Dimzon, Xenia Trier, Tobias Frömel, Rick Helmus, Thomas P. Knepper, P. de Voogt
Software Mentions: 2
Published: over 10 years ago

10.1245/s10434-020-08358-0

Significance of Neoadjuvant Downstaging in Carcinoma of Esophagus and Gastroesophageal Junction
Cited by: 11
Author(s): Sivesh K. Kamarajah, M Navidi, Shajahan Wahed, A Immanuel, Nick Hayes, S. M. Griffin, Alexander W Phillips
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0127455

Pyrosequencing Characterization of the Microbiota from Atlantic Intertidal Marine Sponges Reveals High Microbial Diversity and the Lack of Co-Occurrence Patterns
Cited by: 29
Author(s): Anoop Alex, Agostinho Antunes
Software Mentions: 2
Published: about 11 years ago

10.1186/s12967-018-1728-8

Prediction and prognostic significance of BCAR3 expression in patients with multiple myeloma
Cited by: 10
Author(s): Weilong Zhang, Yuansheng Lin, Xiaoni Liu, Xue He, Ye Zhang, Wei Fu, Zuozhen Yang, Ping Yang, Jing Wang, Kai Hu, Xiuru Zhang, Weiyou Liu, Xiaoliang Yuan, Hongmei Jing
Software Mentions: 2
Published: over 7 years ago

10.3390/pathogens9120982

Proteomic Profiling of the Liver, Hepatic Lymph Nodes, and Spleen of Buffaloes Infected with Fasciola gigantica
Cited by: 6
Author(s): Rui-Si Hu, Fu-Kai Zhang, Hany M. Elsheikha, Qiao-Ni Ma, Muhammad Ehsan, Quan Zhao, Xingquan Zhu
Software Mentions: 2
Published: over 5 years ago

10.1111/acel.12992

Early‐onset aging and mitochondrial defects associated with loss of histone acetyltransferase 1 (Hat1)
Cited by: 21
Author(s): Prabakaran Nagarajan, Paula A. Agudelo Garcia, Chitra C. Iyer, Liudmila V. Popova, W. David Arnold, Mark R. Parthun
Software Mentions: 2
Published: almost 7 years ago

10.3390/pathogens9020075

Enniatin Production Influences Fusarium avenaceum Virulence on Potato Tubers, but not on Durum Wheat or Peas
Cited by: 19
Author(s): Anas Eranthodi, Danielle Schneiderman, Linda J. Harris, Thomas E. Witte, Amanda Sproule, Anne Hermans, David P. Overy, Syama Chatterton, Jiajun Liu, Tao Li, Dianevys González-Peña Fundora, Wensheng Zhao, Nora A. Foroud
Software Mentions: 2
Published: over 6 years ago

10.1186/s12884-021-03809-2

Epidemiological trends of maternal hypertensive disorders of pregnancy at the global, regional, and national levels: a population‐based study
Cited by: 95
Author(s): Wei Wang, Xin Xie, Yuan Tan, Yanyan Wang, Fei Zhao, Zhangjian Zhou, Hao Zhang
Software Mentions: 2
Published: about 5 years ago

10.1245/s10434-020-09200-3

Evolution of Esophagectomy for Cancer Over 30 Years: Changes in Presentation, Management and Outcomes
Cited by: 23
Author(s): S. M. Griffin, Rhiannon Jones, Sivesh K Kamarajah, M Navidi, Shajahan Wahed, A Immanuel, Nick Hayes, Alexander W Phillips
Software Mentions: 2
Published: over 5 years ago

10.1016/j.jmb.2019.12.029

Diverse Antibody Responses to Conserved Structural Motifs in Plasmodium falciparum Circumsporozoite Protein
Cited by: 24
Author(s): Tossapol Pholcharee, David Oyen, Jonathan L. Torres, Yevel Flores-García, Martin Gm, González-Páez Ge, Daniel Emerling, Wayne Volkmuth, Emily Locke, King Cr, Fidel Zavala, A.B. Ward, Wilson Ia
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0234385

Ancestral mitogenome capture of the Southeast Asian banded linsang
Cited by: 9
Author(s): Johanna L. A. Paijmans, Axel Barlow, Kirstin Henneberger, Joerns Fickel, Michael Hofreiter, Daniel W. Foerster
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0234778

Photodepletion with 2-Se-Cl prevents lethal graft-versus-host disease while preserving antitumor immunity
Cited by: 1
Author(s): Jason M. Grayson, Mildred D. Perez, Rebecca Blevins, Benjamin N. Coe, Michael R. Detty, Zachariah A. McIver
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-020-76822-8

Grazing pressure-induced shift in planktonic bacterial communities with the dominance of acIII-A1 actinobacterial lineage in soda pans
Cited by: 11
Author(s): Attila Szabó, Kristóf Korponai, Boglárka Somogyi, Balázs Vajna, Lajos Vörös, Zsófia Horváth, Emil Boros, Nóra Szabó-Tugyi, Károly Màrialigeti, Tamás Felföldi
Software Mentions: 2
Published: over 5 years ago

10.1186/s12870-020-02416-1

Genetic diversity in developmental responses to light spectral quality in barley (Hordeum vulgare L.)
Cited by: 4
Author(s): Ana Belén Monteagudo, Tibor Kiss, Marianna Mayer, Ana M. Casas, Ernesto Igartua, Ildikó Karsaï
Software Mentions: 2
Published: about 6 years ago

10.1186/s40104-020-0427-5

Dynamic alterations in early intestinal development, microbiota and metabolome induced by in ovo feeding of L-arginine in a layer chick model
Cited by: 24
Author(s): Dong Dai, Shu‐geng Wu, Haijun Zhang, Guang‐hai Qi, Jing Wang
Software Mentions: 2
Published: over 6 years ago

10.1245/s10434-020-08199-x

Anastomotic Leak Does Not Impact on Long-Term Outcomes in Esophageal Cancer Patients
Cited by: 21
Author(s): Sivesh K. Kamarajah, M Navidi, Shajahan Wahed, A Immanuel, Nick Hayes, SM Griffin, A W Phillips
Software Mentions: 2
Published: over 6 years ago

10.1186/s12870-019-2214-z

Comparative transcriptomic and metabolic analysis of wild and domesticated wheat genotypes reveals differences in chemical and physical defense responses against aphids
Cited by: 34
Author(s): Zhaniya S Batyrshina, Beery Yaakov, R. Shavit, Anuradha Singh, Vered Tzin
Software Mentions: 2
Published: over 6 years ago

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