cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1242/dmm.047746

Metabolomics and lipidomics in Caenorhabditis elegans using a single-sample preparation
Cited by: 20
Author(s): Marte Molenaars, Bauke V. Schomakers, Hyung L. Elfrink, Arwen W. Gao, Martin A. T. Vervaart, Mia L. Pras‐Raves, Angela C. M. Luyf, Reuben L. Smith, Mark G. Sterken, J.E. Kammenga, Antoine H. C. van Kampen, Georges E. Janssens, Frédéric M. Vaz, Michel van Weeghel, Riekelt H. Houtkooper
Software Mentions: 2
Published: over 5 years ago

10.3389/fonc.2021.692136

A Pan-Cancer Analysis of the Oncogenic Role of Twinfilin Actin Binding Protein 1 in Human Tumors
Cited by: 11
Author(s): Gengwei Huo, Yali Wang, Jinliang Chen, Ying Song, Cuicui Zhang, Hua Guo, Ran Zuo, Fuyi Zhu, Jinfang Cui, Weidong Chen, Wen-Ming Chen, Peng Chen
Software Mentions: 2
Published: about 5 years ago

10.3389/fonc.2020.613869

TSPAN7 Exerts Anti-Tumor Effects in Bladder Cancer Through the PTEN/PI3K/AKT Pathway
Cited by: 21
Author(s): Xi Yu, Shenglan Li, Mingrui Pang, Yang Du, Tao Xu, Tao Bai, Kang Yang, Juncheng Hu, Shaoming Zhu, Lei Wang, Xiuheng Liu
Software Mentions: 2
Published: over 5 years ago

10.3389/fpsyg.2018.02034

A Longitudinal Multilevel Study of the “Social” Genotype and Diversity of the Phenotype
Cited by: 1
Author(s): Elli Oksman, Tom Rosenström, Mirka Hintsanen, Laura Pulkki-Råbäck, Jorma Viikari, Terho Lehtimäki, Olli T. Raitakari, Liisa Keltikangas‐Järvinen
Software Mentions: 2
Published: almost 8 years ago

10.3390/ijms221910666

In Silico Study of the RSH (RelA/SpoT Homologs) Gene Family and Expression Analysis in Response to PGPR Bacteria and Salinity in Brassica napus
Cited by: 8
Author(s): Grażyna B. Dąbrowska, Sena Turkan, Wioleta Tylman-Mojżeszek, Agnieszka Mierek‐Adamska
Software Mentions: 2
Published: almost 5 years ago

10.3389/fpsyg.2019.02245

Positive Psychology Broadens Readers’ Attentional Scope During L2 Reading: Evidence From Eye Movements
Cited by: 7
Author(s): Chi Yui Leung, Hitoshi Mikami, Lisa Yoshikawa
Software Mentions: 2
Published: almost 7 years ago

10.3389/fonc.2021.621432

Glioblastoma Primary Cells Retain the Most Copy Number Alterations That Predict Poor Survival in Glioma Patients
Cited by: 1
Author(s): Chia‐Hua Chen, Yi-Chin Lin, You‐Yu Lin, Chang-Hung Lin, Lin Feng, Ian Yi‐Feng Chang, Kuo‐Chen Wei, Chiung-Yin Huang
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0187128

Differential host mortality explains the effect of high temperature on the prevalence of a marine pathogen
Cited by: 4
Author(s): Timothy J. Sullivan, Joseph E. Neigel
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0247841

Comprehensive in silico analysis and molecular dynamics of the superoxide dismutase 1 (SOD1) variants related to amyotrophic lateral sclerosis
Cited by: 20
Author(s): Gabriel Rodrigues Coutinho Pereira, Bárbara de Azevedo Abrahim Vieira, Joelma Freire De Mesquita
Software Mentions: 2
Published: over 5 years ago

10.3389/fonc.2018.00569

Up-Regulation of hsa-miR-210 Promotes Venous Metastasis and Predicts Poor Prognosis in Hepatocellular Carcinoma
Cited by: 24
Author(s): Jun Jia, Rong Yuan, Chengzhi Luo, Shuo Li, Xiang Jiang, Hong Weng, Hao Chen, Wu-Wen Zhang, Weibin Xie, Xinghuan Wang
Software Mentions: 2
Published: over 7 years ago

10.1155/2021/6682697

Identification of Prognostic and Therapeutic Biomarkers among FAM83 Family Members for Pancreatic Ductal Adenocarcinoma
Cited by: 6
Author(s): Zuyi Ma, Zixuan Zhou, Hongkai Zhuang, Zhenchong Li, Zuguang Ma, Bowen Huang, Chunsheng Liu, Yuanfeng Gong, Yiping Zou, Zehao Zheng, Shanzhou Huang, Chuanzhao Zhang, Baohua Hou
Software Mentions: 2
Published: over 5 years ago

10.3389/fpsyg.2021.675558

Comparison of Different Response Time Outlier Exclusion Methods: A Simulation Study
Cited by: 39
Author(s): Alexander Berger, Markus Kiefer
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-79773-2

Environmental patterns of brown moss- and Sphagnum-associated microbial communities
Cited by: 8
Author(s): Alexander Tøsdal Tveit, Andrea Kiss, Matthias Winkel, Fabian Horn, Tomáš Hájek, Mette M. Svenning, Dirk Wagner, Susanne Liebner
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0238950

Peel-1 negative selection promotes screening-free CRISPR-Cas9 genome editing in Caenorhabditis elegans
Cited by: 4
Author(s): Troy A. McDiarmid, Vinci Au, Donald G. Moerman, Catharine H. Rankin
Software Mentions: 2
Published: almost 6 years ago

10.3389/fonc.2020.569002

Prognostic Value of a Ten-Gene Signature in HNSCC Patients Based on Tumor-Associated Macrophages Expression Profiling
Cited by: 2
Author(s): Zheng Lü, Xiaoli Duan, Hui Li
Software Mentions: 2
Published: almost 6 years ago

10.3389/fonc.2021.628027

LINC00460 Is a Dual Biomarker That Acts as a Predictor for Increased Prognosis in Basal-Like Breast Cancer and Potentially Regulates Immunogenic and Differentiation-Related Genes
Cited by: 9
Author(s): Mireya Cisneros-Villanueva, Lizbett Hidalgo Pérez, Alberto Cedro‐Tanda, Mónica Peña-Luna, Marco Antonio Mancera-Rodríguez, Eduardo Hurtado-Cordova, Irene Rivera-Salgado, Alejandro Martínez-Aguirre, Silvia Jiménez-Morales, Luis Alfaro-Ruiz, Rocío Arellano-Llamas, Alberto Tenorio-Torres, Carlos Alberto Domínguez-Reyes, Felipe Villegas-Carlos, Magdalena Ríos-Romero, Alfredo Hidalgo‐Miranda
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-018-22493-5

A Five-microRNA Signature for Survival Prognosis in Pancreatic Adenocarcinoma based on TCGA Data
Cited by: 37
Author(s): Xiuhui Shi, Li Xu, Hang Zhang, Ruizhi He, Yan Zhao, Min Zhou, Shutao Pan, Chunle Zhao, Yechen Feng, Min Wang, Xiaomao Guo, Renyi Qin
Software Mentions: 2
Published: over 8 years ago

10.3389/fpsyg.2021.664511

State Transition Modeling in Ultimate Frisbee: Adaptation of a Promising Method for Performance Analysis in Invasion Sports
Cited by: 4
Author(s): Hilary Lam, Otto Kolbinger, Martin Lames, Tiago Guedes Russomanno
Software Mentions: 2
Published: about 5 years ago

10.3389/fpsyg.2017.01549

The Dark Triad and the PID-5 Maladaptive Personality Traits: Accuracy, Confidence and Response Bias in Judgments of Veracity
Cited by: 17
Author(s): Benno Gerrit Wissing, Marc‐André Reinhard
Software Mentions: 2
Published: almost 9 years ago

10.3389/fpsyg.2020.00968

Cognitive and Linguistic Predictors of Language Control in Bilingual Children
Cited by: 7
Author(s): Megan Gross, Margarita Kaushanskaya
Software Mentions: 2
Published: over 6 years ago

10.3389/fonc.2020.577443

Salvage Radiation Therapy for Patients With Relapsing Glioblastoma Multiforme and the Role of Slow Fractionation
Cited by: 1
Author(s): I. Frank Ciernik, Yann Gager, C Renner, Sybille Spieker, Nicole Arndt, Karsten Neumann
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.9859

UCN-01 enhances cytotoxicity of irinotecan in colorectal cancer stem-like cells by impairing DNA damage response
Cited by: 16
Author(s): Michele Signore, Mariachiara Buccarelli, Emanuela Pilozzi, Gabriele De Luca, Marianna Cappellari, Maurizio Fanciulli, Frauke Goeman, Elisa Melucci, Mauro Biffoni, Lucia Ricci‐Vitiani
Software Mentions: 2
Published: about 10 years ago

10.3389/fonc.2021.711673

Intra-Tumoral Activation of Endosomal TLR Pathways Reveals a Distinct Role for TLR3 Agonist Dependent Type-1 Interferons in Shaping the Tumor Immune Microenvironment
Cited by: 7
Author(s): Graham D. Thomas, Luca Micci, Wenjing Yang, Joseph A. Katakowski, Cecilia Oderup, Purnima Sundar, Xiao Wang, Kenneth G. Geles, Shobha Potluri, Shahram Salek-Ardakani
Software Mentions: 2
Published: about 5 years ago

10.1152/jn.00375.2020

Isoflurane anesthesia disrupts the cortical metabolome
Cited by: 5
Author(s): Aaron G. Baer, Allen K. Bourdon, Joshua Price, Shawn R. Campagna, Daniel Jacobson, Helen A. Baghdoyan, Ralph Lydic
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-79868-w

Unique behavioural modifications in the web structure of the cave orb spider Meta menardi (Araneae, Tetragnathidae)
Cited by: 5
Author(s): Daniel Simonsen, Thomas Hesselberg
Software Mentions: 2
Published: over 5 years ago

10.3389/fgene.2019.01251

Identification of Key Candidate Genes in Dairy Cow in Response to Escherichia coli Mastitis by Bioinformatical Analysis
Cited by: 13
Author(s): Liabin Li, Xiuli Chen, Zeshi Chen
Software Mentions: 2
Published: over 6 years ago

10.1155/2019/1569049

Expression of La Ribonucleoprotein Domain Family Member 4B (LARP4B) in Liver Cancer and Their Clinical and Prognostic Significance
Cited by: 11
Author(s): Yanqing Li, Yan Jiao, Yang Li, Yanan Liu
Software Mentions: 2
Published: almost 7 years ago

10.3389/fgene.2021.661109

Prediction of BRCA Gene Mutation in Breast Cancer Based on Deep Learning and Histopathology Images
Cited by: 28
Author(s): Xiaoxiao Wang, Chong Zou, Yi Zhang, Xiuqing Li, Chenxi Wang, Ke Fei, Jie Chen, Wei Wang, Dian Wang, Xinyu Xu, Ling Xie, Yifen Zhang
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-26172-3

A correlative and quantitative imaging approach enabling characterization of primary cell-cell communication: Case of human CD4+ T cell-macrophage immunological synapses
Cited by: 2
Author(s): Richard Kasprowicz, Emma Rand, Peter O’Toole, Nathalie Signoret
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2021.659602

Interaction Between the Intestinal Microbial Community and Transcriptome Profile in Common Carp (Cyprinus carpio L.)
Cited by: 8
Author(s): Shengyan Su, Xiaojun Jing, Chengfeng Zhang, Yiran Hou, Zhixun Li, Xiao Yang, Xiaolin Zhou, Pao Xu, Yongkai Tang, Jian Zhu
Software Mentions: 2
Published: about 5 years ago

10.1111/eva.13081

Growing in the city: Urban evolutionary ecology of avian growth rates
Cited by: 27
Author(s): Michela Corsini, Eva Maria Schöll, Irene Di Lecce, Marion Chatelain, Anna Dubiec, Marta Szulkin
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2020.585836

Adaptation to Aquatic and Terrestrial Environments in Chlorella vulgaris (Chlorophyta)
Cited by: 11
Author(s): Siegfried Aigner, Karin Glaser, Erwann Arc, Andreas Holzinger, Michael Schletter, Ulf Karsten, Ilse Kranner
Software Mentions: 2
Published: almost 6 years ago

10.1016/j.prevetmed.2017.12.007

Co-infection with Fasciola hepatica may increase the risk of Escherichia coli O157 shedding in British cattle destined for the food chain
Cited by: 10
Author(s): Alison Howell, Sue C. Tongue, Colin Currie, J. Evans, Diana Williams, Tom N. McNeilly
Software Mentions: 2
Published: over 8 years ago

10.3389/fpsyg.2020.572153

Ahead of the Curve: Responses From Patients in Treatment for Obsessive-Compulsive Disorder to Coronavirus Disease 2019
Cited by: 13
Author(s): Jennie M. Kuckertz, Nathaniel Van Kirk, David Alperovitz, Jacob A. Nota, Martha J. Falkenstein, Meghan Schreck, Jason W. Krompinger
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-018-23502-3

Using spatial mark-recapture for conservation monitoring of grizzly bear populations in Alberta
Cited by: 25
Author(s): John Boulanger, Scott E. Nielsen, Gordon B. Stenhouse
Software Mentions: 2
Published: over 8 years ago

10.1186/s13073-015-0192-9

ENVE: a novel computational framework characterizes copy-number mutational landscapes in colorectal cancers from African American patients
Cited by: 2
Author(s): Vinay Varadan, Salendra Singh, Arman Nosrati, Lakshmeswari Ravi, James Lutterbaugh, Jill S. Barnholtz‐Sloan, Sanford D. Markowitz, Joseph E. Willis, Kishore Guda
Software Mentions: 2
Published: about 11 years ago

10.1186/s12917-019-1988-4

Characterization of functional traits with focus on udder health in heifers with divergent paternally inherited haplotypes on BTA18
Cited by: 11
Author(s): A. Heimes, J. Brodhagen, Rosemarie Weikard, H.M. Hammon, M. Meyerholz, Wolfram Petzl, Holm Zerbe, Susanne Engelmann, Marion Schmicke, Martina Hoedemaker, H. J. Schuberth, Christa Kühn
Software Mentions: 2
Published: about 7 years ago

10.3389/fpsyg.2020.01713

Parents' Stress and Children's Psychological Problems in Families Facing the COVID-19 Outbreak in Italy
Cited by: 557
Author(s): Maria Spinelli, Francesca Lionetti, Massimiliano Pastore, Mirco Fasolo
Software Mentions: 2
Published: about 6 years ago

10.2196/12811

Identifying Attrition Phases in Survey Data: Applicability and Assessment Study
Cited by: 14
Author(s): Camille J. Hochheimer, Roy Sabo, Robert A. Perera, Nitai D. Mukhopadhyay, Alex H. Krist
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2017.01871

Phloroglucinol Degradation in the Rumen Promotes the Capture of Excess Hydrogen Generated from Methanogenesis Inhibition
Cited by: 32
Author(s): Gonzalo Martínez Fernández, Stuart E. Denman, Jane Cheung, Christopher S. McSweeney
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12917-018-1711-x

Aspirin eugenol ester regulates cecal contents metabolomic profile and microbiota in an animal model of hyperlipidemia
Cited by: 19
Author(s): Ning Ma, Xi-Wang Liu, Xiaojun Kong, Shihong Li, Zeng-Hua Jiao, Zhe Qin, Yajun Yang, Jianyong Li
Software Mentions: 2
Published: over 7 years ago

10.3390/genes12081211

Expanding the Search for Sperm Transmission Elements in the Mitochondrial Genomes of Bivalve Mollusks
Cited by: 3
Author(s): Donald T. Stewart, Brent M. Robicheau, Noor Youssef, Manuel A. Garrido-Ramos, Emily Chase, Sophie Breton
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0179763

Urban air quality forecasting based on multi-dimensional collaborative Support Vector Regression (SVR): A case study of Beijing-Tianjin-Shijiazhuang
Cited by: 64
Author(s): Bingchun Liu, Arihant Binaykia, Pei‐Chann Chang, Manoj Kumar Tiwari, Cheng-Chin Tsao
Software Mentions: 2
Published: about 9 years ago

10.1038/s41416-018-0108-8

Mendelian randomisation study of age at menarche and age at menopause and the risk of colorectal cancer
Cited by: 15
Author(s): Sonja Neumeyer, Barbara L. Banbury, Volker Arndt, Sonja I. Berndt, Stéphane Bézieau, Stephanie A. Bien, Daniel D. Buchanan, Katja Butterbach, Bette J. Caan, Peter T. Campbell, Graham Casey, Andrew T. Chan, Stephen J. Chanock, Jiyan Dai, Steven Gallinger, Edward Giovannucci, Graham G. Giles, William M. Grady, Jochen Hampe, Michael Hoffmeister, John L. Hopper, Li Hsu, Mark A. Jenkins, Amit D. Joshi, Susanna C. Larsson, Loı̈c Le Marchand, Annika Lindblom, Vı́ctor Moreno, Mathieu Lemire, Li Li, Yi Lin, Kenneth Offit, Polly A. Newcomb, Paul D.P. Pharaoh, John D. Potter, Lihong Qi, Gad Rennert, Clemens Schafmayer, Robert E. Schoen, Martha L. Slattery, Mingyang Song, Cornelia M. Ulrich, Aung Ko Win, Emily White, Alicja Wolk, Michael O. Woods, Anna H. Wu, Stephen B. Gruber, Hermann Brenner, Ulrike Peters, Jenny Chang‐Claude
Software Mentions: 2
Published: about 8 years ago

10.1093/femsre/fuab018

Ecological and Evolutionary responses to Antibiotic Treatment in the Human Gut Microbiota
Cited by: 17
Author(s): Joseph Hugh Pennycook, Pauline D. Scanlan
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-018-26947-8

Comparing Sanger sequencing and high-throughput metabarcoding for inferring photobiont diversity in lichens
Cited by: 37
Author(s): Fiona Paul, Jürgen Otte, Imke Schmitt, Francesco Dal Grande
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-020-79438-0

Incorporating human mobility data improves forecasts of Dengue fever in Thailand
Cited by: 29
Author(s): Mathew V. Kiang, Mauricio Santillana, Jarvis T. Chen, Jukka‐Pekka Onnela, Nancy Krieger, Kenth Engø‐Monsen, Nattwut Ekapirat, Darin Areechokchai, Preecha Prempree, Richard J. Maude, Caroline O. Buckee
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.00666

A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep
Cited by: 33
Author(s): Saad B. Almasaudi, Abdessamad El Kaoutari, Élodie Drula, Hussein A. Almehdar, Elrashdy M. Redwan, Vincent Lombard, Bernard Henrissat
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2017.01339

Global Biogeographic Analysis of Methanogenic Archaea Identifies Community-Shaping Environmental Factors of Natural Environments
Cited by: 60
Author(s): Wen Xi, Shuai Yang, Fabian Horn, Matthias Winkel, Dirk Wagner, Susanne Liebner
Software Mentions: 2
Published: about 9 years ago

10.3389/fmicb.2019.02413

A Simple and Robust Statistical Method to Define Genetic Relatedness of Samples Related to Outbreaks at the Genomic Scale – Application to Retrospective Salmonella Foodborne Outbreak Investigations
Cited by: 15
Author(s): Nicolas Radomski, Sabrina Cadel-Six, Emeline Cherchame, Arnaud Felten, Pauline Barbet, Federica Di Palma, Ludovic Mallet, Simon Le Hello, François‐Xavier Weill, Laurent Guillier, Michel‐Yves Mistou
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12870-021-03079-2

The characterization of key physiological traits of medicinal cannabis (Cannabis sativa L.) as a tool for precision breeding
Cited by: 15
Author(s): Erez Naim-Feil, Luke W. Pembleton, Laura E. Spooner, Alix L. Malthouse, Amy S. Miner, Melinda Quinn, Renata M. Polotnianka, Rebecca C. Baillie, Germán Spangenberg, Noel O. I. Cogan
Software Mentions: 2
Published: about 5 years ago

10.1590/1678-4685-GMB-2018-0140

Gene pool sharing and genetic bottleneck effects in subpopulations of Eschweilera ovata (Cambess.) Mart. ex Miers (Lecythidaceae) in the Atlantic Forest of southern Bahia, Brazil
Cited by: 3
Author(s): Alesandro Souza Santos, Daniela B. Borges, Caio Vinicius Vivas, Cássio van den Berg, Polliana Silva Rodrigues, Roberto Tarazi, Fernanda Amato Gaiotto
Software Mentions: 2
Published: almost 7 years ago

10.1590/1678-4685-GMB-2018-0235

Genome-wide identification and characterization of R2R3-MYB genes in Medicago truncatula
Cited by: 15
Author(s): Wei Li, Ying Liu, Jianfeng Zhao, Xin Zhen, Changhong Guo, Yongjun Shu
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-020-79831-9

Multi-pronged approach to human mesenchymal stromal cells senescence quantification with a focus on label-free methods
Cited by: 11
Author(s): Weichao Zhai, Jerome Zu Yao Tan, Tobias Russell, Sixun Chen, Dennis McGonagle, May Win Naing, Derrick Yong, Elena Jones
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0203953

Biodiversity of cyanobacteria and other aquatic microorganisms across a freshwater to brackish water gradient determined by shotgun metagenomic sequencing analysis in the San Francisco Estuary, USA
Cited by: 18
Author(s): Tomofumi Kurobe, Peggy W. Lehman, Bruce G. Hammock, Melissa B. Bolotaolo, Sarah Lesmeister, Swee J. Teh
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2021.620424

Organic Electron Donors and Terminal Electron Acceptors Structure Anaerobic Microbial Communities and Interactions in a Permanently Stratified Sulfidic Lake
Cited by: 9
Author(s): Connie A. Rojas, Ana de Santiago Torio, Serry Park, Tanja Bosak, Vanja Klepac‐Ceraj
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0228065

Towards a global understanding of the drivers of marine and terrestrial biodiversity
Cited by: 35
Author(s): Tyler Gagne, Gabriel Reygondeau, Clinton N. Jenkins, Joseph O. Sexton, Steven J. Bograd, Elliott L. Hazen, Kyle S. Van Houtan
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2020.01933

Metagenomic Insights Into the Effects of Rare-Earth Elements Supplementation on Rumen Digestibility and Meat Quality of Beef Cattle
Cited by: 4
Author(s): Long Xu, Wen LuHua, Ge Yu, Gen Wan, Mingren Qu, Fuguang Xue
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12711-016-0200-6

Comparing the transcriptomes of embryos from domesticated and wild Atlantic salmon (Salmo salar L.) stocks and examining factors that influence heritability of gene expression
Cited by: 18
Author(s): Beatrix Bicskei, John B. Taggart, Kevin A. Glover, James E. Bron
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-018-27566-z

Biomimetic post-capillary venule expansions for leukocyte adhesion studies
Cited by: 9
Author(s): Bryan L. Benson, Lucy Li, Jay Myers, Rodney Dixon Dorand, Umut A. Gürkan, Alex Y. Huang, Richard M. Ransohoff
Software Mentions: 2
Published: about 8 years ago

10.3389/fgene.2020.551220

Analysis of the Spectrum of ACE2 Variation Suggests a Possible Influence of Rare and Common Variants on Susceptibility to COVID-19 and Severity of Outcome
Cited by: 27
Author(s): Anton E. Shikov, Yury A. Barbitoff, Andrey S. Glotov, Maria M. Danilova, Ziravard N. Tonyan, Yulia A. Nasykhova, А. А. Михайлова, Olesya N. Bespalova, Roman S. Kalinin, Azizahon M. Mirzorustamova, I. Yu. Kogan, Vladislav S Baranov, Alexander N. Chernov, Dragana M. Pavlovich, Sergey V. Azarenko, Mikhail A. Fedyakov, Victoria V. Tsay, Yuri A. Eismont, О. В. Романова, Dmitry N. Hobotnikov, Dmitry A. Vologzhanin, С. В. Мосенко, Tatiana A. Ponomareva, Yana A. Talts, Anna U. Anisenkova, Д Г Лисовец, Andrey М. Sarana, Stanislav P. Urazov, Sergey G. Scherbak, Oleg S. Glotov
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-018-26768-9

RETRACTED ARTICLE: The Na/K-ATPase Oxidant Amplification Loop Regulates Aging
Cited by: 28
Author(s): Komal Sodhi, Alexandra Nichols, Amrita Mallick, Rebecca L. Klug, Jiang Liu, Xiaoliang Wang, Krithika Srikanthan, Perrine Goguet-Rubio, Athar Nawab, Rebecca Pratt, Megan N. Lilly, Juan Sanabria, Zijian Xie, Nader G. Abraham, Joseph I. Shapiro
Software Mentions: 2
Published: about 8 years ago

10.1186/s12917-019-2006-6

Metabolic derangements and reduced survival of bile-extracted Asiatic black bears (Ursus thibetanus)
Cited by: 9
Author(s): Monica Kaho Herkules Bando, O. Lynne Nelson, Clark Kogan, Rance K. Sellon, Michelle M. Wiest, Heather Bacon, Mandala Hunter-Ishikawa, Wendy Leadbeater, Koji Yamazaki, Yipeng Jin, Takeshi Komatsu, David McGeachy
Software Mentions: 2
Published: about 7 years ago

10.1186/1752-0509-9-S3-S5

A knowledge base for Vitis vinifera functional analysis
Cited by: 13
Author(s): Alfredo Pulvirenti, Rosalba Giugno, Rosario Distefano, Giuseppe Pigola, Misael Mongiovì, Girolamo Giudice, Vera Vendramin, Alfio Lombardo, Federica Cattonaro, Alfredo Ferro
Software Mentions: 2
Published: over 11 years ago

10.1186/s12711-021-00613-6

Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe
Cited by: 12
Author(s): Christin Schmidtmann, Anna Amanda Schönherz, Bernt Guldbrandtsen, Jovana Marjanovic, M.P.L. Calus, Dirk Hinrichs, Georg Thaller
Software Mentions: 2
Published: over 5 years ago

10.1534/genetics.116.196964

A Bibliometric History of the JournalGENETICS
Cited by: 5
Author(s): Natalie Telis, Benjamin V. Lehmann, Marcus W. Feldman, Jonathan K. Pritchard
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-018-28048-y

Butyrate produced by gut commensal bacteria activates TGF-beta1 expression through the transcription factor SP1 in human intestinal epithelial cells
Cited by: 124
Author(s): Camille Martin-Gallausiaux, Fabienne Béguet-Crespel, Ludovica Marinelli, Alexandre Jamet, Florence Ledue, Hervé M. Blottière, Nicolas Lapaque
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-28091-9

Differential preservation of endogenous human and microbial DNA in dental calculus and dentin
Cited by: 86
Author(s): Allison E. Mann, Susanna Sabin, Kirsten A. Ziesemer, Åshild J. Vågene‬, Hannes Schroeder, Andrew T. Ozga, Krithivasan Sankaranarayanan, Courtney A. Hofman, James A. Fellows Yates, Domingo C. Salazar‐García, Bruno Fröhlich, Mark Aldenderfer, Menno L. P. Hoogland, Christopher Read, George R. Milner, Anne C. Stone, Cecil M. Lewis, Johannes Krause, Corinne L. Hofman, Kirsten I. Bos, Christina Warinner
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0221226

Structural and biochemical studies of an NB-ARC domain from a plant NLR immune receptor
Cited by: 39
Author(s): John F. C. Steele, Richard K. Hughes, Mark J. Banfield
Software Mentions: 2
Published: almost 7 years ago

10.1534/genetics.120.303378

Systematic Humanization of the Yeast Cytoskeleton Discerns Functionally Replaceable from Divergent Human Genes
Cited by: 12
Author(s): Riddhiman K. Garge, Jon M Laurent, Aashiq H. Kachroo, Edward M. Marcotte
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-021-81257-w

Analysis of global human gut metagenomes shows that metabolic resilience potential for short-chain fatty acid production is strongly influenced by lifestyle
Cited by: 10
Author(s): David P. Jacobson, Tanvi P. Honap, Andrew T. Ozga, Nicolas Méda, Thérèse Kagoné, Hélène Carabin, Paul Spicer, Raúl Y. Tito, Alexandra J. Obregón-Tito, Luis Marín Reyes, Luzmila Troncoso-Corzo, Emilio Guija-Poma, Krithivasan Sankaranarayanan, Cecil M. Lewis
Software Mentions: 2
Published: over 5 years ago

10.1186/gb-2010-11-10-r102

An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation
Cited by: 39
Author(s): Gregory P Harhay, Timothy P. L. Smith, L. J. Alexander, Christian Haudenschild, J. W. Keele, Lakshmi K. Matukumalli, Steven G. Schroeder, Curtis P. Van Tassell, Cathy Gresham, Susan M. Bridges, Shane C. Burgess, Tad S. Sonstegard
Software Mentions: 2
Published: almost 16 years ago

10.20892/j.issn.2095-3941.2019.0353

Neutrophil extracellular traps mediate the crosstalk between glioma progression and the tumor microenvironment via the HMGB1/RAGE/IL-8 axis
Cited by: 120
Author(s): Caijun Zha, Xiangqi Meng, Lulu Li, Shan Mi, Qian Da, Ziwei Li, Pengfei Wu, Shaoshan Hu, Shijun Zhao, Jinquan Cai
Software Mentions: 2
Published: over 6 years ago

10.1093/femsec/fiaa021

Methanogenic response to long-term permafrost thaw is determined by paleoenvironment
Cited by: 22
Author(s): Stine Holm, Josefine Walz, Fabian Horn, Shuai Yang, Mikhail N. Grigoriev, Dirk Wagner, Christian Knoblauch, Susanne Liebner
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2020.01335

Breast-Milk Microbiota Linked to Celiac Disease Development in Children: A Pilot Study From the PreventCD Cohort
Cited by: 22
Author(s): Alfonso Benı́tez-Páez, Marta Olivares, Hania Szajewska, Małgorzata Pieścik-Lech, Isabel Polanco, Gemma Castillejo, M. Del Carmen Nunez, Carmen Ribes-Koninckx, Ilma Rita Korponay-Szabó, Sibylle Koletzko, C. Meijer, M. Luisa Mearin, Yolanda Sanz
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.ppat.1009368

The allelic rice immune receptor Pikh confers extended resistance to strains of the blast fungus through a single polymorphism in the effector binding interface
Cited by: 32
Author(s): Juan Carlos De la Concepcion, Josephine HR Maidment, Apinya Longya, Gui Xiao, Marina Franceschetti, Mark J. Banfield
Software Mentions: 2
Published: over 5 years ago

10.1002/psp4.12505

Prediction of Clinical Transporter‐Mediated Drug–Drug Interactions via Comeasurement of Pitavastatin and Eltrombopag in Human Hepatocyte Models
Cited by: 1
Author(s): Simon J. Carter, Bhavik Chouhan, Pradeep Sharma, Michael J. Chappell
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2020.572017

Impact of Terrestrial Input on Deep-Sea Benthic Archaeal Community Structure in South China Sea Sediments
Cited by: 4
Author(s): Dengxun Lai, Brian P. Hedlund, Wei Xie, Jingjing Liu, Tommy J. Phelps, Chuanlun Zhang, Peng Wang
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13059-014-0469-0

Global loss of DNA methylation uncovers intronic enhancers in genes showing expression changes
Cited by: 137
Author(s): Adam Blattler, Lijing Yao, Heather Witt, Yu Guo, Charles M. Nicolet, Benjamin P. Berman, Peggy J. Farnham
Software Mentions: 2
Published: almost 12 years ago

10.3758/s13423-016-1124-4

Fixation durations in scene viewing: Modeling the effects of local image features, oculomotor parameters, and task
Cited by: 64
Author(s): Antje Nuthmann
Software Mentions: 2
Published: about 10 years ago

10.3389/fgene.2021.724734

Organelle Genome Variation in the Red Algal Genus Ahnfeltia (Florideophyceae)
Cited by: 0
Author(s): Ho-Cheol Kim, Ji Hyun Yang, Danilo E. Bustamante, Martha S. Calderón, Andrés Mansilla, Christine A. Maggs, Gayle I. Hansen, Hwan Su Yoon
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0115574

Stochastic Fluctuations and Distributed Control of Gene Expression Impact Cellular Memory
Cited by: 34
Author(s): Guillaume Corre, Daniel Stockholm, Ophélie Arnaud, Gaël Kaneko, J. Viñuelas, Yuriko Yamagata, Thi My Anh Neildez-Nguyen, Jean-Jacques Kupiec, Guillaume Beslon, Olivier Gandrillon, Andràs Páldi
Software Mentions: 2
Published: over 11 years ago

10.3389/fmicb.2019.01105

Longitudinal Gut Bacterial Colonization and Its Influencing Factors of Low Birth Weight Infants During the First 3 Months of Life
Cited by: 17
Author(s): Cheng Chi, Yong Xue, Na Lv, Yanan Hao, Ruixia Liu, Yanxin Wang, Xin Ding, Hu Zeng, Geng Li, Qun Shen, Xiaosong Hu, Lijun Chen, Tiemin Jiang, Jianxin Zhao, Nicholas Buys, Jing Sun, Chenghong Yin, Baoli Zhu
Software Mentions: 2
Published: over 7 years ago

10.2196/26646

Future Medical Artificial Intelligence Application Requirements and Expectations of Physicians in German University Hospitals: Web-Based Survey
Cited by: 35
Author(s): Oliver Maaßen, Sebastian Fritsch, Julia Palm, Saskia Deffge, J. Kunze, Gernot Marx, Morris Riedel, Andreas Schuppert, Johannes Bickenbach
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-018-27657-x

Zebrafish mutants and TEAD reporters reveal essential functions for Yap and Taz in posterior cardinal vein development
Cited by: 37
Author(s): Matteo Astone, Jason Kuan Han Lai, Sirio Dupont, Didier Y. R. Stainier, Francesco Argenton, Andrea Vettori
Software Mentions: 2
Published: about 8 years ago

10.3390/diagnostics8030055

A Preliminary Study of Contrast-Enhanced Ultrasound (CEUS) and Cytokine Expression Analysis (CEA) as Early Predictors for the Outcome of Tibial Non-Union Therapy
Cited by: 7
Author(s): Patrick Haubruck, Raban Arved Heller, Michael C. Tanner, Volker Daniel, Gerhard Schmidmaier, Farhoud Bolourchi, Arash Moghaddam, Christian Fischer
Software Mentions: 2
Published: almost 8 years ago

10.2196/jmir.6533

Supervised Machine Learning Algorithms Can Classify Open-Text Feedback of Doctor Performance With Human-Level Accuracy
Cited by: 41
Author(s): Chris Gibbons, Suzanne H Richards, José M Valderas, John Campbell
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2019.02081

Metatranscriptomic Analyses of Diel Metabolic Functions During a Microcystis Bloom in Western Lake Erie (United States)
Cited by: 18
Author(s): Emily J. Davenport, Michelle Neudeck, Paul G. Matson, George S. Bullerjahn, Timothy W. Davis, Steven W. Wilhelm, Maddie K. Denney, Lauren E. Krausfeldt, Joshua M. A. Stough, Kevin A. Meyer, Gregory J. Dick, Thomas H. Johengen, Erika Lindquist, Susannah G. Tringe, R. Michael L. McKay
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13059-016-0879-2

Epigenomic analysis detects aberrant super-enhancer DNA methylation in human cancer
Cited by: 174
Author(s): Holger Heyn, Enrique Vidal, Humberto J. Ferreira, Miguel Vizoso, Sergi Sayols, Antonio Gómez, Sebastian Morán, Raquel Boqué-Sastre, Sònia Guil, Anna Martínez-Cardús, Charles Y. Lin, Romina Royo, José Vicente Sánchez-Mut, Ramón Martínez, Marta Gut, David Torrents, Modesto Orozco, Richard A. Young, Manel Esteller
Software Mentions: 2
Published: over 10 years ago

10.3389/fmicb.2018.03091

Combination of Clostridium butyricum and Corn Bran Optimized Intestinal Microbial Fermentation Using a Weaned Pig Model
Cited by: 19
Author(s): Jie Zhang, Sun Jian, Xiyue Chen, Cunxi Nie, Jinbiao Zhao, Wanyi Guan, Li-Hui Lei, Ting He, Yiqiang Chen, Lee J Johnston, Jinshan Zhao
Software Mentions: 2
Published: over 7 years ago

10.1096/fj.201901618RR

The RNA‐binding protein ILF3 binds to transposable element sequences in SINEUP lncRNAs
Cited by: 20
Author(s): Francesca Fasolo, Laura Patrucco, Massimiliano Volpe, Carlotta Bon, Clelia Peano, Flavio Mignone, Piero Carninci, Francesca Persichetti, Claudio Santoro, S. Zucchelli, Daniele Sblattero, Remo Sanges, Diego Cotella, Stefano Gustincich
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0237274

Population reduction by hunting helps control human–wildlife conflicts for a species that is a conservation success story
Cited by: 11
Author(s): David L. Garshelis, Karen V. Noyce, Véronique St‐Louis
Software Mentions: 2
Published: about 6 years ago

10.1186/s13059-016-1130-x

Insights into the design and interpretation of iCLIP experiments
Cited by: 70
Author(s): Nejc Haberman, Ina Huppertz, Jan Attig, Julian König, Zhen Wang, Christian Hauer, Matthias W. Hentze, Andreas E. Kulozik, Hervé Le Hir, Tomaž Curk, Christopher R. Sibley, Kathi Zarnack, Jernej Ule
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2021.628746

Tundra Type Drives Distinct Trajectories of Functional and Taxonomic Composition of Arctic Fungal Communities in Response to Climate Change – Results From Long-Term Experimental Summer Warming and Increased Snow Depth
Cited by: 8
Author(s): József Geml, Luis Morgado, Tatiana A. Semenova‐Nelsen
Software Mentions: 2
Published: over 5 years ago

10.1523/JNEUROSCI.1279-19.2019

Higher CSF Tau Levels Are Related to Hippocampal Hyperactivity and Object Mnemonic Discrimination in Older Adults
Cited by: 59
Author(s): David Berron, Arturo Cárdenas-Blanco, Daniel Bittner, Coraline D. Metzger, Annika Spottke, Michael T. Heneka, Klaus Fließbach, Anja Schneider, Stefan J. Teipel, Michael Wagner, Oliver Speck, Frank Jessen, Emrah Düzel
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2017.02369

Variations of the Organic Matter Composition in the Sea Surface Microlayer: A Comparison between Open Ocean, Coastal, and Upwelling Sites Off the Peruvian Coast
Cited by: 28
Author(s): Birthe Zäncker, Astrid Bracher, Rüdiger Röttgers, Anja Engel
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2015.01239

Modeling the synergistic antibacterial effects of honey characteristics of different botanical origins from the Sahara Desert of Algeria
Cited by: 23
Author(s): Hadda Laallam, Larbi Boughediri, Samia Bissati, Taha Menasria, Mohamed S. Mouzaoui, Soumia Hadjadj, Rokia Hammoudi, Haroun Chenchouni
Software Mentions: 2
Published: almost 11 years ago

10.3389/fmicb.2021.621069

Zooming Into the Microbiota of Home-Made and Industrial Kefir Produced in Greece Using Classical Microbiological and Amplicon-Based Metagenomics Analyses
Cited by: 29
Author(s): Μαρία Κάζου, Andriana Grafakou, Effie Tsakalidou, Marina Georgalaki
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2020.565267

Relationship Between the Fatty Acid Profiles and Gut Bacterial Communities of the Chinese Mitten Crab (Eriocheir sinensis) From Ecologically Different Habitats
Cited by: 11
Author(s): Shengyan Su, Brian Pelekelo Munganga, Fukuan Du, Jie Yu, Jianlin Li, Fan Yu, Meiyao Wang, Xinjin He, Xinyuan Li, Raouf Bouzoualegh, Pao Xu, Yongkai Tang
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0251368

SARS-CoV-2: Possible recombination and emergence of potentially more virulent strains
Cited by: 50
Author(s): Dania Haddad, Sumi Elsa John, Anwar Mohammad, Maha M. Hammad, Prashantha Hebbar, Arshad Channanath, Rasheeba Nizam, Sarah Al-Qabandi, Ashraf Al Madhoun, Abdullah Alshukry, Hamad Ali, Thangavel Alphonse Thanaraj, Fahd Al-Mulla
Software Mentions: 2
Published: about 5 years ago

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