cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/ani11040938

Assessment of the Behavioural Response of Korean Water Deer (Hydropotes inermis argyropus) to Different Fence Heights
Cited by: 3
Author(s): Hee-Bok Park, Donggul Woo, Tae Young Choi, Sungwon Hong
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-98637-x

TYROBP, TLR4 and ITGAM regulated macrophages polarization and immune checkpoints expression in osteosarcoma
Cited by: 19
Author(s): Tuo Liang, Jiarui Chen, Guoyong Xu, Zide Zhang, Jiang Xue, Huilan Zeng, Jie Jiang, Tianyou Chen, Zhaojie Qin, Hao Li, Zhen Ye, Yunfeng Nie, Chong Liu, Xinli Zhan
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0247026

How does COVID-19 affect electoral participation? evidence from the French municipal elections
Cited by: 34
Author(s): Abdul Noury, François Audigier, Olivier Gergaud, Alexandre Garel
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2020.596303

Thymoproteasome-Expressing Mesenchymal Stromal Cells Confer Protective Anti-Tumor Immunity via Cross-Priming of Endogenous Dendritic Cells
Cited by: 8
Author(s): Jean-Pierre Bikorimana, Nehmé El-Hachem, Abed El-Hakim El-Kadiry, Jamilah Abusarah, Natasha Salame, Riam Shammaa, Moutih Rafei
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0171368

A global review of past land use, climate, and active vs. passive restoration effects on forest recovery
Cited by: 249
Author(s): Paula Meli, Karen D. Holl, José María Rey Benayas, Holly P. Jones, Peter Tom Jones, Daniel Montoya, David Moreno-Mateos
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0251961

Myosin 1C isoform A is a novel candidate diagnostic marker for prostate cancer
Cited by: 2
Author(s): Aleena A. Saidova, Daria Potashnikova, Anna Tvorogova, Oxana Paklina, Е. И. Велиев, Grigoriy V. Knyshinsky, Galiya Setdikova, Д. Л. Ротин, Ivan V. Maly, Wilma A. Hofmann, Ivan A. Vorobjev
Software Mentions: 3
Published: over 5 years ago

10.3390/ani9100745

Can Responsible Ownership Practices Influence Hunting Behavior of Owned Cats?: Results from a Survey of Cat Owners in Chile
Cited by: 12
Author(s): Sebastián Escobar, Raúl Alegría-Morán, Javiera Calderón-Amor, Tamara Tadich
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0055895

A Microarray Platform-Independent Classification Tool for Cell of Origin Class Allows Comparative Analysis of Gene Expression in Diffuse Large B-cell Lymphoma
Cited by: 61
Author(s): Matthew A. Care, Sharon Barrans, Lisa Worrillow, Andrew Jack, David R. Westhead, Reuben Tooze
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0169753

Bacterial Communities Associated with Houseflies (Musca domestica L.) Sampled within and between Farms
Cited by: 65
Author(s): Simon Bahrndorff, Nadieh de Jonge, Henrik Skovgård, Jeppe Lund Nielsen
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-021-98119-0

The importance of environmental microbes for Drosophila melanogaster during seasonal macronutrient variability
Cited by: 4
Author(s): Lucy Rebecca Davies, Volker Loeschcke, Mads Fristrup Schou, Andreas Schramm, Torsten Nygård Kristensen
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0250423

Millet-based supplement restored gut microbial diversity of acute malnourished pigs
Cited by: 3
Author(s): Xuejing Li, Yan Hui, Bingfeng Leng, Jinhan Ren, Yanni Song, Lianqiang Che, Xi Peng, Baojia Huang, Songling Liu, Lin Li, Dennis Sandris Nielsen, Yong Li, Xiaoshuang Dai, Shancen Zhao
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-97890-4

Probiotics maintain the gut microbiome homeostasis during Indian Antarctic expedition by ship
Cited by: 6
Author(s): Ashish Kumar Srivastava, Vishwajeet Rohil, Brij Bhushan, Malleswara Rao Eslavath, Harshita Gupta, Sunirmal Chanda, Bhuvnesh Kumar, Rajeev K. Varshney, Lilly Ganju
Software Mentions: 3
Published: almost 5 years ago

10.1155/2020/4673250

Changes in Gut Microorganism in Patients with Positive Immune Antibody-Associated Recurrent Abortion
Cited by: 4
Author(s): Min Jin, Dong Li, Rui Ji, Wen Liu, Xiaofei Xu, Xin Feng
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-021-97871-7

Deep mutational scanning of the plasminogen activator inhibitor-1 functional landscape
Cited by: 7
Author(s): Zachary M. Huttinger, Laura M. Haynes, Andrew Yee, Colin A. Kretz, Matthew L. Holding, David Siemieniak, Daniel A. Lawrence, David Ginsburg
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0096727

Comprehensive Evaluation and Optimization of Amplicon Library Preparation Methods for High-Throughput Antibody Sequencing
Cited by: 53
Author(s): Ulrike Menzel, Victor Greiff, Tarik A. Khan, Ulrike Haessler, Ina Hellmann, Simon Friedensohn, Skylar C. Cook, Mark Pogson, Sai T. Reddy
Software Mentions: 3
Published: over 12 years ago

10.1155/2021/2545459

Identification of Differentially Expressed circRNAs, miRNAs, and Genes in Patients Associated with Cartilaginous Endplate Degeneration
Cited by: 0
Author(s): Haiwei Xu, Yongjin Li, Jianhua Li, Zhenxin Huo, Guowang Li, Lilong Du, Lijun Tian, Bei Xu
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-018-37749-3

The effect of interventions on the transmission and spread of HIV in South Africa: a phylodynamic analysis
Cited by: 8
Author(s): Eduan Wilkinson, Dennis Maletich Junqueira, Richard Lessells, Susan Engelbrecht, Gert van Zyl, Túlio de Oliveira, Marco Salemi
Software Mentions: 3
Published: over 7 years ago

10.1155/2020/2064582

ID1 As a Prognostic Biomarker and Promising Drug Target Plays a Pivotal Role in Deterioration of Clear Cell Renal Cell Carcinoma
Cited by: 1
Author(s): Xiangmin Qiu, Yue Gu, Yilu Ni, Qianyin Li
Software Mentions: 3
Published: almost 6 years ago

10.1155/2018/1972606

Integrated Analysis of MicroRNA (miRNA) and mRNA Profiles Reveals Reduced Correlation between MicroRNA and Target Gene in Cancer
Cited by: 19
Author(s): Xingsong Li, Xiaokang Yu, Yuting He, Yuhuan Meng, Jinsheng Liang, Lizhen Huang, Hongli Du, Xueping Wang, Wanli Liu
Software Mentions: 3
Published: over 7 years ago

10.1155/2020/1817094

Identification of Crucial lncRNAs, miRNAs, mRNAs, and Potential Therapeutic Compounds for Polycystic Ovary Syndrome by Bioinformatics Analysis
Cited by: 9
Author(s): Zhi Zeng, Xiao Lin, Tingting Xia, Wenxiu Liu, Xingui Tian, Manchao Li
Software Mentions: 3
Published: almost 6 years ago

10.7554/eLife.61073

Plasma proteomic biomarker signature of age predicts health and life span
Cited by: 63
Author(s): Toshiko Tanaka, Nathan Basisty, Giovanna Fantoni, Julián Candia, Ann Zenobia Moore, Angélique Biancotto, Birgit Schilling, Stefania Bandinelli, Luigi Ferrucci
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0201852

A ‘Comprehensive Visual Rating Scale’ for predicting progression to dementia in patients with mild cognitive impairment
Cited by: 9
Author(s): Jae-Won Jang, Jeong Hoon Park, Seongheon Kim, Young Ho Park, Jung Min Pyun, Jae Sung Lim, Young‐Ho Kim, Young Chul Youn, SangYun Kim, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 3
Published: about 8 years ago

10.1155/2021/6633563

Shared Molecular Mechanisms between Alzheimer’s Disease and Periodontitis Revealed by Transcriptomic Analysis
Cited by: 10
Author(s): Jieqi Jin, Mengkai Guang, Anthony Chukwunonso Ogbuehi, Simin Li, Kai Zhang, Yihong Ma, Aneesha Acharya, Bihan Guo, Zongwu Peng, Xiangqiong Liu, Yupei Deng, Ziyu Fang, Xiongjie Zhu, Shiting Hua, Cong Liu, Rainer Haak, Dirk Ziebolz, Gerhard Schmalz, Lei Liu, Baohua Xu, Xiaofeng Huang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0257394

How COVID-19 kick-started online learning in medical education—The DigiMed study
Cited by: 57
Author(s): Fabian Stoehr, Lukáš Müller, Adrian P. Brady, Antoni Trilla, Aline Mähringer‐Kunz, Felix Hähn, Christoph Düber, N. Becker, Marcus‐Alexander Wörns, Julius Chapiro, Jan B. Hinrichs, Deniz Akata, Stephan Ellmann, Merel Huisman, David Koff, S Brinkmann, Fabian Bamberg, Oscar Zimmermann, N. Traikova, Jens U. Marquardt, De‐Hua Chang, Fabian Rengier, Timo Alexander Auer, Tilman Emrich, Felix Muehler, Heinz Schmidberger, Bettina Baeßler, Daniel Pinto dos Santos, Roman Kloeckner
Software Mentions: 3
Published: almost 5 years ago

10.3390/ani11051198

Does Traditional Feeding of Outdoor Guard Dogs Provide a Food Resource for Wild Mammals and Birds?
Cited by: 2
Author(s): Róża Andrzejczak, Łukasz Dylewski, Leszek Jerzak, Branislav Peťko, Łukasz Myczko
Software Mentions: 3
Published: over 5 years ago

10.3390/ani7120096

Should the Contribution of One Additional Lame Cow Depend on How Many Other Cows on the Farm Are Lame?
Cited by: 11
Author(s): Peter Sandøe, Björn Forkman, Franziska Hakansson, S.N. Andreasen, Rikke Nøhr, Matt Denwood, Thomas Bøker Lund
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0258019

Wave-wise comparative genomic study for revealing the complete scenario and dynamic nature of COVID-19 pandemic in Bangladesh
Cited by: 12
Author(s): Ishtiaque Ahammad, Mohammad Uzzal Hossain, Ashikur Rahman, Zeshan Mahmud Chowdhury, Arittra Bhattacharjee, Keshob Chandra Das, Chaman Ara Keya, Md. Salimullah
Software Mentions: 3
Published: almost 5 years ago

10.3389/fphar.2018.00151

Quality Variation of Goji (Fruits of Lycium spp.) in China: A Comparative Morphological and Metabolomic Analysis
Cited by: 48
Author(s): Ruyu Yao, Michael Heinrich, Yuanfeng Zou, Eike Reich, Xiaolei Zhang, Yu Chen, Caroline S. Weckerle
Software Mentions: 3
Published: over 8 years ago

10.1186/s12859-018-2133-2

TIA: algorithms for development of identity-linked SNP islands for analysis by massively parallel DNA sequencing
Cited by: 1
Author(s): Michele Farris, Andrew R. Scott, Pamela A. Texter, Marta Bartlett, Patricia Coleman, David J. Masters
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0215332

Azospirillum brasilense promotes increases in growth and nitrogen use efficiency of maize genotypes
Cited by: 101
Author(s): Douglas Mariani Zeffa, Luiz Júnior Perini, Mayara Barbosa Silva, Nicholas Vieira de Sousa, Carlos Alberto Scapim, André Luíz Martinez de Oliveira, Antônio Teixeira do Amaral Júnior, Leandro Simões Azeredo Gonçalves
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-021-97408-y

Real-time quantitation of thyroidal radioiodine uptake in thyroid disease with monitoring by a collar detection device
Cited by: 2
Author(s): Prasanna Santhanam, Lilja B. Solnes, Tanmay Nath, Jean-Paul Roussin, Daniel C. Gray, Eric Frey, George Sgouros, Paul W. Ladenson
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0241119

Chytridiomycosis-induced mortality in a threatened anuran
Cited by: 9
Author(s): Andrea J. Adams, Allan P. Pessier, Peggy Cranston, Robert L. Grasso
Software Mentions: 3
Published: almost 6 years ago

10.3389/fphar.2021.691200

Comparative Efficacy and Acceptability of Anti-inflammatory Agents on Major Depressive Disorder: A Network Meta-Analysis
Cited by: 20
Author(s): Xiaoyi Hang, Yijie Zhang, Jingjing Li, Zhenzhen Li, Yi Zhang, Xuanhao Ye, Qisheng Tang, Wenjun Sun
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-021-97862-8

Regional heterogeneity in coral species richness and hue reveals novel global predictors of reef fish intra-family diversity
Cited by: 2
Author(s): Kieran Cox, Mackenzie B. Woods, T. E. Reimchen
Software Mentions: 3
Published: almost 5 years ago

10.3390/nu13020426

Composition of Dietary Fatty Acids and Health Risks in Japanese Youths
Cited by: 1
Author(s): Masayuki Okuda, Aya Fujiwara, Satoshi Sasaki
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-021-97128-3

The critical role of natural history museums in advancing eDNA for biodiversity studies: a case study with Amazonian fishes
Cited by: 11
Author(s): Carlos David de Santana, Lynne R. Parenti, Casey B. Dillman, Jonathan A. Coddington, Douglas Aviz Bastos, Carole C. Baldwin, Jansen Zuanon, Gislene Torrente‐Vilara, Raphaël Covain, Naércio A. Menezes, Aléssio Datovo, Tetsuya Sadõ, Masaki Miya
Software Mentions: 3
Published: almost 5 years ago

10.1186/1742-6405-8-26

HIV-1 mutational pathways under multidrug therapy
Cited by: 13
Author(s): Glenn Lawyer, André Altmann, Alexander Thielen, Maurizio Zazzi, Anders Sönnerborg, Thomas Lengauer
Software Mentions: 3
Published: over 15 years ago

10.1155/2018/6515670

Microbiota Composition in Upper Respiratory Tracts of Healthy Children in Shenzhen, China, Differed with Respiratory Sites and Ages
Cited by: 23
Author(s): Heping Wang, Wenkui Dai, Xin Feng, Qian Zhou, Hongmei Wang, Yonghong Yang, Shuai Cheng Li, Yuejie Zheng
Software Mentions: 3
Published: about 8 years ago

10.1038/s41598-019-39445-2

Transcriptomics of cardiac biopsies reveals differences in patients with or without diagnostic parameters for heart failure with preserved ejection fraction
Cited by: 32
Author(s): Sarbashis Das, Christoffer Frisk, Maria Eriksson, Anna Walentinsson, Matthias Corbascio, Camilla Hage, Chanchal Kumar, Michaela Asp, Joakim Lundeberg, Eva Maret, Hans Persson, Cecilia Linde, Bengt Persson
Software Mentions: 3
Published: over 7 years ago

10.1155/2018/1097018

Complex Analyses of Short Inverted Repeats in All Sequenced Chloroplast DNAs
Cited by: 20
Author(s): Václav Brázda, Jiří Lýsek, Martin Bartas, Miroslav Fojta
Software Mentions: 3
Published: about 8 years ago

10.3389/fimmu.2021.599512

Profiles of Immune Cell Infiltration in Carotid Artery Atherosclerosis Based on Gene Expression Data
Cited by: 11
Author(s): Long Wang, Beibei Gao, Mingyue Wu, Wei Yuan, Ping Liang, Jinyu Huang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0219706

Two tales: Worldwide distribution of Central Asian (CAS) versus ancestral East-African Indian (EAI) lineages of Mycobacterium tuberculosis underlines a remarkable cleavage for phylogeographical, epidemiological and demographical characteristics
Cited by: 23
Author(s): David Couvin, Yann Reynaud, Nalin Rastogi
Software Mentions: 3
Published: about 7 years ago

10.3389/fimmu.2019.01177

Differential Pathogenic Th17 Profile in Mesenteric Lymph Nodes of Crohn's Disease and Ulcerative Colitis Patients
Cited by: 34
Author(s): Marwa Bsat, Laurence Chapuy, Manuel Rubio, Ramsès Wassef, Carole Richard, Frank Schwenter, Rasmy Loungnarath, Geneviève Soucy, Heena Mehta, Marika Sarfati
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0245524

CKMT1B is a potential prognostic biomarker and associated with immune infiltration in Lower-grade glioma
Cited by: 8
Author(s): Huadi Shi, Yiyun Song, Zeqing Song, Ching‐Wen Huang
Software Mentions: 3
Published: over 5 years ago

10.1155/2020/2340124

Novel Discoveries Targeting Pathogenic Gut Microbes and New Therapies in Pancreatic Cancer: Does Pathogenic E. coli Infection Cause Pancreatic Cancer Progression Modulated by TUBB/Rho/ROCK Signaling Pathway? A Bioinformatic Analysis
Cited by: 7
Author(s): Wenhao Luo, Zhe Cao, Jiangdong Qiu, Yueze Liu, Lianfang Zheng, Taiping Zhang
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0207985

Disruption of the microbiota affects physiological and evolutionary aspects of insecticide resistance in the German cockroach, an important urban pest
Cited by: 40
Author(s): Jose E. Pietri, Connor R. Tiffany, Dangsheng Liang
Software Mentions: 3
Published: over 7 years ago

10.1155/2020/8925420

Integrated Analysis of Hub Genes and miRNAs in Dilated Cardiomyopathy
Cited by: 11
Author(s): Kai Huang, Shuyan Wen, Junhui Huang, Fangrui Wang, Liewen Pang, Yiqing Wang, Xiaotian Sun
Software Mentions: 3
Published: almost 6 years ago

10.7554/eLife.57000

Subcellular sorting of neuregulins controls the assembly of excitatory-inhibitory cortical circuits
Cited by: 18
Author(s): David Exposito-Alonso, Catarina Osório, C. Bernard, Sandra Pascual-García, Isabel del Pino, Òscar Marín, Beatriz Rico
Software Mentions: 3
Published: over 5 years ago

10.1186/1471-2415-13-40

Tear fluid proteomics multimarkers for diabetic retinopathy screening
Cited by: 46
Author(s): Zsuzsa Török, Tünde Pető, Éva Csősz, Edit Tukacs, Ágnes Molnár, Zsuzsanna Maros-Szabó, András Berta, József Tőzsér, András Hajdú, Valéria Nagy, Bálint Domokos, Adrienne Csutak
Software Mentions: 3
Published: about 13 years ago

10.1371/journal.pone.0101777

Rapid Phenotypic and Genomic Change in Response to Therapeutic Pressure in Prostate Cancer Inferred by High Content Analysis of Single Circulating Tumor Cells
Cited by: 123
Author(s): Angel E. Dago, Asya Stepansky, Anders Carlsson, Madelyn Luttgen, Jude Kendall, Timour Baslan, Anand Kolatkar, Michael Wigler, Kelly Bethel, Mitchell E. Gross, James Hicks, Peter Kühn
Software Mentions: 3
Published: about 12 years ago

10.1186/s12883-018-1149-6

Comorbidity of migraine with ADHD in adults
Cited by: 24
Author(s): Thomas Folkmann Hansen, Louise K. Hoeffding, Lisette J. A. Kogelman, Thilde Marie Haspang, Henrik Ullum, Erik Sørensen, Christian Erikstrup, Ole Birger Pedersen, Kaspar René Nielsen, Henrik Hjalgrim, Helene M. Paarup, Thomas Werge, Kristoffer Sølvsten Burgdorf
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0042737

Climate and Weather Impact Timing of Emergence of Bats
Cited by: 58
Author(s): Winifred F. Frick, Phillip M. Stepanian, Jeffrey F. Kelly, Kenneth W. Howard, Charles M. Kuster, Thomas Kunz, Phillip B. Chilson
Software Mentions: 3
Published: about 14 years ago

10.1038/s41598-021-96844-0

Transcriptional overlap links DNA hypomethylation with DNA hypermethylation at adjacent promoters in cancer
Cited by: 9
Author(s): Jean S. Fain, Axelle Loriot, Anna Diacofotaki, Aurélie Van Tongelen, Charles De Smet
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0198554

Descriptions of self-treatment for the middle-aged and elderly in Shanxi, China
Cited by: 9
Author(s): Rui Wang, Chenjin Ma, Kun Jiang, Ming Li, Shuangge Ma
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0244252

Divergence of photosynthetic strategies amongst marine diatoms
Cited by: 16
Author(s): Nerissa L. Fisher, Douglas A. Campbell, David Hughes, Unnikrishnan Kuzhiumparambil, Kimberly H. Halsey, Peter J. Ralph, David J. Suggett
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0209535

How to build a fruit: Transcriptomics of a novel fruit type in the Brassiceae
Cited by: 4
Author(s): Shane Carey, Kerrin Mendler, Jocelyn C. Hall
Software Mentions: 3
Published: about 7 years ago

10.1186/s12882-020-01828-3

The association between serum chloride levels and chronic kidney disease progression: a cohort study
Cited by: 13
Author(s): Minesh Khatri, Joshua P. Zitovsky, Dale Lee, Kamal Nayyar, Melissa Fazzari, Candace D. Grant
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0211981

A non-linear mixed effect model for innate immune response: In vivo kinetics of endotoxin and its induction of the cytokines tumor necrosis factor alpha and interleukin-6
Cited by: 15
Author(s): Anders Thorsted, Salim Bouchène, Eva Tano, Markus Castegren, Miklós Lipcsey, Jan Sjölin, Mats O. Karlsson, Lena E. Friberg, Elisabet I. Nielsen
Software Mentions: 3
Published: over 7 years ago

10.3389/fimmu.2020.618685

Distinct Features and Functions of Systemic and Mucosal Humoral Immunity Among SARS-CoV-2 Convalescent Individuals
Cited by: 75
Author(s): Savannah E. Butler, Andrew R. Crowley, Harini Natarajan, Shiwei Xu, Joshua A. Weiner, Carly A. Bobak, Daniel Mattox, Jiwon Lee, Wendy Wieland-Alter, Ruth I. Connor, Peter F. Wright, Margaret E. Ackerman
Software Mentions: 3
Published: over 5 years ago

10.1186/s12891-017-1791-y

Co-expression of 1α-hydroxylase and vitamin D receptor in human articular chondrocytes
Cited by: 10
Author(s): Ann Kristin Hansen, Yngve Figenschau, Inigo Zubiaurre-Martinez
Software Mentions: 3
Published: almost 9 years ago

10.1038/s41598-021-96577-0

Occurrence of Mycoplasma spp. in wild birds: phylogenetic analysis and potential factors affecting distribution
Cited by: 5
Author(s): Anna Sawicka, Olimpia Kursa, Łukasz Bednarz, Grzegorz Tomczyk
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0149975

Host Plant Use by the Invasive Halyomorpha halys (Stål) on Woody Ornamental Trees and Shrubs
Cited by: 75
Author(s): Erik J. Bergmann, P. Dilip Venugopal, Holly M. Martinson, Michael J. Raupp, Paula M. Shrewsbury
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0251891

Testing of four-sample pools offers resource optimization without compromising diagnostic performance of real time reverse transcriptase-PCR assay for COVID-19
Cited by: 5
Author(s): Anirudh Singh, Ram Kumar Nema, Ankur Joshi, Prem Shankar, Sudheer Gupta, Abhishek Yadav, Shashwati Nema, Bijina J. Mathew, Arti Shrivas, Chitra Patankar, Arun Raghuwanshi, Ritu Pandey, Ranu Tripathi, Kudsia Ansari, Kuldeep Singh, Jogender Yadav, Debasis Biswas, Sarman Singh
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-40564-z

Decline of transmissible gastroenteritis virus and its complex evolutionary relationship with porcine respiratory coronavirus in the United States
Cited by: 38
Author(s): Fangzhou Chen, Todd P. Knutson, Stephanie Rossow, Linda J. Saif, Douglas Marthaler
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0239718

The Lichtenberg Keilmesser - it’s all about the angle
Cited by: 19
Author(s): Marcel Weiß
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0235448

Prevalence of depressive symptoms among nurses in China: A systematic review and meta-analysis
Cited by: 31
Author(s): Nanzhen Xie, Qin Yan, Taiwu Wang, Ying Zeng, Xia Deng, Li Guan
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0053656

Methyl Fluoride Affects Methanogenesis Rather than Community Composition of Methanogenic Archaea in a Rice Field Soil
Cited by: 16
Author(s): Anne Daebeler, Martina Gansen, Peter Frenzel
Software Mentions: 3
Published: over 13 years ago

10.1186/s12866-019-1548-x

Comparative diversity of microbiomes and Resistomes in beef feedlots, downstream environments and urban sewage influent
Cited by: 24
Author(s): Rahat Zaheer, Steven M. Lakin, Rodrigo Ortega Polo, Shaun R. Cook, Francis J. Larney, Paul S. Morley, Calvin W. Booker, Sherry J. Hannon, Gary Van Domselaar, Ron Read, Tim A. McAllister
Software Mentions: 3
Published: almost 7 years ago

10.1080/07853890.2021.1908588

Multi-omics reveals novel prognostic implication of SRC protein expression in bladder cancer and its correlation with immunotherapy response
Cited by: 9
Author(s): Wenhao Xu, Aihetaimujiang Anwaier, Chao Ma, Wangrui Liu, Xi Tian, Maierdan Palihati, Xiaoxin Hu, Yuanyuan Qu, Ye Zhang, Dingwei Ye
Software Mentions: 3
Published: over 5 years ago

10.3389/fmed.2021.693188

Synbiotic Therapy Prevents Nosocomial Infection in Critically Ill Adult Patients: A Systematic Review and Network Meta-Analysis of Randomized Controlled Trials Based on a Bayesian Framework
Cited by: 8
Author(s): Cong Liu, Ling Liu, Zhiwei Gao, Junwei Zhang, Hui Chen, Shaolei Ma, Airan Liu, Min Mo, Changde Wu, Dongyu Chen, Songqiao Liu, Jianfeng Xie, Yingzi Huang, Haibo Qiu, Yi Yang
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0163482

Using a Control to Better Understand Phyllosphere Microbiota
Cited by: 44
Author(s): Andrea Ottesen, S. Gorham, Elizabeth Reed, Michael J. Newell, Padmini Ramachandran, Travis Canida, Marc W. Allard, Peter W. Evans, Eric W. Brown, James R. White
Software Mentions: 3
Published: almost 10 years ago

10.1038/s41598-021-96249-z

Identities, concentrations, and sources of pesticide exposure in pollen collected by managed bees during blueberry pollination
Cited by: 21
Author(s): Kelsey K. Graham, Meghan O. Milbrath, Yajun Zhang, Annuet Soehnlen, Nicolas Baert, Scott H. McArt, Rufus Isaacs
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0232995

76-year decline and recovery of aspen mediated by contrasting fire regimes: Long-unburned, infrequent and frequent mixed-severity wildfire
Cited by: 2
Author(s): Cerena J. Brewen, John‐Pascal Berrill, Martin W. Ritchie, Kevin Boston, Christa M. Dagley, Bobette E. Jones, Michelle Coppoletta, Coye L. Burnett
Software Mentions: 3
Published: over 5 years ago

10.3389/fmed.2021.667525

FABP5, a Novel Immune-Related mRNA Prognostic Marker and a Target of Immunotherapy for Multiple Myeloma
Cited by: 7
Author(s): Haipeng Jia, Xiaofen Zhang, Xinxin Liu, Ruifang Qiao, Yan Liu, Sulong Lv, Hongbo Zhu, Jie Wang, Qiuhong Kong, Hong Zhang, Zhirong Zhang
Software Mentions: 3
Published: about 5 years ago

10.7554/eLife.54928

A broad mutational target explains a fast rate of phenotypic evolution
Cited by: 11
Author(s): Fabrice Besnard, João Picão-Osório, Clément Dubois, Marie‐Anne Félix
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-021-95909-4

Identification of genes, pathways and transcription factor-miRNA-target gene networks and experimental verification in venous thromboembolism
Cited by: 3
Author(s): Yiming Su, Qiyi Li, Zhiyong Zheng, Xiaomin Wei, Peiyong Hou
Software Mentions: 3
Published: about 5 years ago

10.1186/s12866-021-02139-9

Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing
Cited by: 8
Author(s): Sofie Marie Edslev, Paal Skytt Andersen, Tove Agner, Ditte Marie Lindhardt Saunte, Anna Cäcilia Ingham, Thor Bech Johannesen, Maja‐Lisa Clausen
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0240390

Managing flowering time in Miscanthus and sugarcane to facilitate intra- and intergeneric crosses
Cited by: 9
Author(s): Hongxu Dong, Lindsay V. Clark, Xiaoli Jin, Kossonou Guillaume Anzoua, Л. В. Багмет, Pavel Chebukin, Elena Dzyubenko, N. I. Dzyubenko, Bimal Kumar Ghimire, Kweon Heo, Douglas A. Johnson, Hironori Nagano, Andrey Sabitov, Junhua Peng, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks
Software Mentions: 3
Published: over 5 years ago

10.1186/s12866-021-02197-z

Sewage and sewage-contaminated environments are the most prominent sources to isolate phages against Pseudomonas aeruginosa
Cited by: 14
Author(s): Bahareh Lashtoo Aghaee, Mohammadali Khan Mirzaei, Mohammad Yousef Alikhani, Ali Mojtahedi
Software Mentions: 3
Published: over 5 years ago

10.3389/fmicb.2020.538476

Aeolian Prokaryotic Communities of the Global Dust Belt Over the Red Sea
Cited by: 5
Author(s): Nojood Aalismail, Rubén Díaz‐Rúa, David Kamanda Ngugi, Michael Cusack, Carlos M. Duarte
Software Mentions: 3
Published: almost 6 years ago

10.18632/aging.101985

Prediction of competing endogenous RNA coexpression network as prognostic markers in AML
Cited by: 38
Author(s): Jun Dan Wang, Hongsheng Zhou, Xi Xiang Tu, Yi He, Qi Fa Liu, Quentin Liu, Zi Long
Software Mentions: 3
Published: about 7 years ago

10.3389/fphar.2020.559618

Metabolomics Deciphers Potential Targets of Xuefu Zhuyu Decoction Against Traumatic Brain Injury in Rat
Cited by: 9
Author(s): Teng Li, En Hu, Pengfei Li, Zhaoyu Yang, Yi-Ming Wu, Ruoqi Ding, Xiaofei Zhu, Tao Tang, Yang Wang
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0242685

Exploring the influence of deforestation on dengue fever incidence in the Brazilian Amazonas state
Cited by: 11
Author(s): Alexandra Kalbus, Vanderson de Souza Sampaio, Juliane Boenecke, Ralf Reintjes
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0197400

Prevalence and outcomes of proton pump inhibitor associated hypomagnesemia in chronic kidney disease
Cited by: 10
Author(s): Jane Hughes, Diana Chiu, P A Kalra, Darren Green
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0247495

Change detection of auditory tonal patterns defined by absolute versus relative pitch information. A combined behavioural and EEG study
Cited by: 3
Author(s): Nina Coy, M. K. M. Bader, Erich Schröger, Sabine Grimm
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0140964

Influence of Development and Dietary Phospholipid Content and Composition on Intestinal Transcriptome of Atlantic Salmon (Salmo salar)
Cited by: 30
Author(s): Christian De Santis, John F. Taylor, Laura Martínez-Rubio, Sebastián Boltaña, Douglas R. Tocher
Software Mentions: 3
Published: almost 11 years ago

10.1186/s12866-021-02288-x

Comparison of targeted metagenomics and IS-Pro methods for analysing the lung microbiome
Cited by: 2
Author(s): Tanweer Goolam Mahomed, Rph Peters, Ghj Pretorius, Akhter Goolam Mahomed, Veronica Ueckermann, Marleen M. Kock, M.M. Ehlers
Software Mentions: 3
Published: about 5 years ago

10.1186/s12866-019-1586-4

Improved single-swab sample preparation for recovering bacterial and phage DNA from human skin and wound microbiomes
Cited by: 14
Author(s): Samuel Verbanic, Colin Y. Kim, John M. Deacon, Irene Chen
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0218426

Impact of health service interventions on acute hospital use in community-dwelling persons with dementia: A systematic literature review and meta-analysis
Cited by: 17
Author(s): Claire Godard‐Sebillotte, Mélanie Le Berre, Tibor Schuster, Miguel Trottier, Isabelle Vedel
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-020-73867-7

Repeated sampling facilitates within- and between-subject modeling of the human sperm transcriptome to identify dynamic and stress-responsive sncRNAs
Cited by: 14
Author(s): Christopher P. Morgan, Amol Shetty, Jackie Chan, David Berger, Seth A. Ament, C. Neill Epperson, Tracy L. Bale
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12866-021-02284-1

Comparison of three amplicon sequencing approaches to determine staphylococcal populations on human skin
Cited by: 3
Author(s): Charlotte Marie Ahle, Kristian Stødkilde, Anja Poehlein, Wolfgang R. Streit, Jennifer Hüpeden, Holger Brüggemann
Software Mentions: 3
Published: about 5 years ago

10.18632/aging.202853

Comprehensive analysis of genomic and immunological profiles in Chinese and Western hepatocellular carcinoma populations
Cited by: 4
Author(s): Wei Li, Hong Wu, Xuewen Xu, Zhang Yange
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0201889

Population structure, relatedness and ploidy levels in an apple gene bank revealed through genotyping-by-sequencing
Cited by: 28
Author(s): B. Larsen, Kyle M. Gardner, Carsten Pedersen, Marian Ørgaard, Zoë Migicovsky, Sean Myles, Torben Bo Toldam‐Andersen
Software Mentions: 3
Published: about 8 years ago

10.3389/fmed.2020.00556

Expression Pattern and Prognostic Value of Key Regulators for m6A RNA Modification in Hepatocellular Carcinoma
Cited by: 12
Author(s): Lele Zhang, Yiting Qiao, Jiacheng Huang, Dalong Wan, Lin Zhou, Shigang Lin, Shusen Zheng
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12866-017-1111-6

Temporal dynamics in microbial soil communities at anthrax carcass sites
Cited by: 11
Author(s): Karoline Valseth, Camilla Nesbø, W. Ryan Easterday, Wendy C. Turner, Jaran Strand Olsen, Nils Chr. Stenseth, Thomas Haverkamp
Software Mentions: 3
Published: almost 9 years ago

10.1186/1471-2180-12-220

Increased knowledge of Francisella genus diversity highlights the benefits of optimised DNA-based assays
Cited by: 15
Author(s): Jon Ahlinder, Caroline Öhrman, Kerstin Svensson, Petter Lindgren, Anders Johansson, Mats Forsman, Pär Larsson, Andreas Sjödin
Software Mentions: 3
Published: over 14 years ago

10.18632/aging.202876

Identification of prognostic biomarkers associated with the occurrence of portal vein tumor thrombus in hepatocellular carcinoma
Cited by: 10
Author(s): Tong Lin, Lin Zheng, Peipei Mai, E Zhang, Lisheng Peng
Software Mentions: 3
Published: over 5 years ago

10.7554/eLife.59659

Def6 regulates endogenous type-I interferon responses in osteoblasts and suppresses osteogenesis
Cited by: 9
Author(s): Zhonghao Deng, Courtney Ng, Kenzo Inoue, Ziyu Chen, Yuhan Xia, Xiaoyu Hu, Matthew B. Greenblatt, Alessandra B. Pernis, Baohong Zhao
Software Mentions: 3
Published: over 5 years ago

10.1016/j.nutres.2021.05.005

Metabolomic changes in severe acute malnutrition suggest hepatic oxidative stress: a secondary analysis
Cited by: 5
Author(s): Mariana Parenti, Shannon McClorry, Elizabeth A. Maga, Carolyn M. Slupsky
Software Mentions: 3
Published: about 5 years ago

10.18632/aging.203039

Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways
Cited by: 6
Author(s): Jazmín Calyeca, Yalbi I. Balderas-Martínez, Moisés Selman, Annie Pardo
Software Mentions: 3
Published: over 5 years ago

Projects: cran: ggplot2

Enhanced Analysis

Science Score: 100/100

Bonuses:

Papers Mentioning ggplot2 11,441