cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0250665

Application of machine learning and genetic optimization algorithms for modeling and optimizing soybean yield using its component traits
Cited by: 28
Author(s): Mohsen Yoosefzadeh-Najafabadi, Dan Tulpan, Milad Eskandari
Software Mentions: 4
Published: over 5 years ago

10.3390/nu11061425

Mixed Spices at Culinary Doses Have Prebiotic Effects in Healthy Adults: A Pilot Study
Cited by: 24
Author(s): Qing-Yi Lu, Anna Rasmussen, Jieping Yang, Ru-Po Lee, Jianjun Huang, Paul Shao, Catherine L. Carpenter, Irene Gilbuena, Gail Thames, Susanne M. Henning, David Heber, Zhaoping Li
Software Mentions: 4
Published: about 7 years ago

10.3389/fneur.2020.582767

Added Prognostic Value of Hemorrhagic Transformation Quantification in Patients With Acute Ischemic Stroke
Cited by: 8
Author(s): Katinka R. van Kranendonk, Kilian M. Treurniet, Anna M. M. Boers, Olvert A. Berkhemer, Jonathan M. Coutinho, Hester F. Lingsma, Wim H. van Zwam, Aad van der Lugt, Robert J. van Oostenbrugge, Diederik W.J. Dippel, Yvo B.W.E.M. Roos, Henk A. Marquering, Charles B. L. M. Majoie, Clean Registry Investigators
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0222486

Are dialects socially learned in marmoset monkeys? Evidence from translocation experiments
Cited by: 20
Author(s): Yvonne Zürcher, Erik P. Willems, Judith M. Burkart
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0229442

Diel, daily, and spatial variation of coral reef seawater microbial communities
Cited by: 21
Author(s): Laura Weber, Amy Apprill
Software Mentions: 4
Published: over 6 years ago

10.3390/nu12072098

Selenium Deficiency Is Associated with Mortality Risk from COVID-19
Cited by: 257
Author(s): Arash Moghaddam, Raban Arved Heller, Qian Sun, Julian Seelig, Asan Cherkezov, Linda Seibert, Julian Hackler, Petra Seemann, Joachim Diegmann, Maximilian Pilz, Manuel Bachmann, Waldemar B. Minich, Lutz Schomburg
Software Mentions: 4
Published: about 6 years ago

10.1107/S2052252517008557

Experimental phase determination with selenomethionine or mercury-derivatization in serial femtosecond crystallography
Cited by: 22
Author(s): Keitaro Yamashita, N. Kuwabara, Takanori Nakane, Taichi Murai, Eiichi Mizohata, Michihiro Sugahara, Dongqing Pan, Tetsuya Masuda, Mamoru Suzuki, Tomomi Satō, Atsushi Kodan, Tomohiro Yamaguchi, Eriko Nango, Tomoyuki Tanaka, Kensuke Tono, Yasumasa Joti, Takashi Kameshima, Takaki Hatsui, Makina Yabashi, Hiroshi Manya, Tamao Endo, Ryuichi Kato, Toshiya Senda, Hiroaki Katô, So Iwata, Hideo Ago, Masaki Yamamoto, Fumiaki Yumoto, Toru Nakatsu
Software Mentions: 4
Published: about 9 years ago

10.1186/s13020-020-00377-z

Comparison of volatile compounds in different parts of fresh Amomum villosum Lour. from different geographical areas using cryogenic grinding combined HS–SPME–GC–MS
Cited by: 14
Author(s): Lingxiao Chen, Yunfeng Lai, Wei‐Xiong Zhang, Jing Cai, Hao Quan Hu, Ying Wang, Jing Zhao, Shaoping Li
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12885-019-5863-2

Long term outcome after 48 Gy stereotactic ablative body radiotherapy for peripheral stage I non-small cell lung cancer
Cited by: 4
Author(s): Emilie Dubaere, M. Goffaux, Marie Wanet, Benoît Bihin, Céline Gheldof, A S Demoulin, A. Bolly, F. Bustin, Fabrice Duplaquet, P. E. Baugnée, M. Gustin, Vincent Hers, F. Maisin, Éric Marchand, Sebahat Ocak, Lionel Pirard, Oswald Vancutsem, Evelyne Van Neck, G Vandermoten, L. Zaharia, Vincent Remouchamps
Software Mentions: 4
Published: about 7 years ago

10.3389/fneur.2019.00450

Cross-Sectional and Longitudinal MRI Brain Scans Reveal Accelerated Brain Aging in Multiple Sclerosis
Cited by: 61
Author(s): Einar August Høgestøl, Tobias Kaufmann, Gro Owren Nygaard, Mona K. Beyer, Piotr Sowa, Jan Egil Nordvik, Knut-Kristian Kolskår, Geneviève Richard, Ole A. Andreassen, Hanne F. Harbo, Lars T. Westlye
Software Mentions: 4
Published: over 7 years ago

10.3389/fimmu.2021.685742

Antibiotic Intervention Affects Maternal Immunity During Gestation in Mice
Cited by: 6
Author(s): Marilen Benner, Alejandro Lopez-Rincon, Suzan Thijssen, Johan Garssen, Gerben Ferwerda, Irma Joosten, Renate G. van der Molen, Astrid Hogenkamp
Software Mentions: 4
Published: almost 5 years ago

10.1016/j.appet.2018.10.021

Impact of proximity of healthier versus less healthy foods on intake: A lab-based experiment
Cited by: 10
Author(s): Jennifer A. Hunter, Gareth J Hollands, Mark Pilling, Theresa Marteau
Software Mentions: 4
Published: over 7 years ago

10.1128/AEM.02470-17

Influence of Pig Farming on the Human Nasal Microbiota: Key Role of Airborne Microbial Communities
Cited by: 59
Author(s): Julia G. Kraemer, Alban Ramette, Suzanne Aebi, Anne Oppliger, Markus Hilty
Software Mentions: 4
Published: over 8 years ago

10.1186/s12885-021-07930-5

The construction and validation of an RNA binding protein-related prognostic model for bladder cancer
Cited by: 17
Author(s): Fengxia Chen, Qingqing Wang, Youwen Zhou
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0237775

Diet type influences the gut microbiome and nutrient assimilation of Genetically Improved Farmed Tilapia (Oreochromis niloticus)
Cited by: 30
Author(s): Lara Parata, Debashish Mazumder, Jesmond Sammut, Suhelen Egan
Software Mentions: 4
Published: about 6 years ago

10.3390/ijerph18073742

Do Rural Second Homes Shape Commensal Microbiota of Urban Dwellers? A Pilot Study among Urban Elderly in Finland
Cited by: 4
Author(s): Mika Saarenpää, Marja I. Roslund, Riikka Puhakka, Mira Grönroos, Nan Hui, Noora Nurminen, Olli H. Laitinen, Heikki Hyöty, Ondřej Cinek, Aki Sinkkonen
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0188640

Epidemiological and genetic characteristics of EV71 in hand, foot, and mouth disease in Guangxi, southern China, from 2010 to 2015
Cited by: 27
Author(s): Minmei Chen, Yu‐Min Ju, Zhiping Xie, Zhou Kai-jiao, Yi Tan, Mo JianJun
Software Mentions: 4
Published: over 8 years ago

10.3389/fneur.2021.576382

Potential Molecular Mechanism of TNF Superfamily-Related Genes in Glioblastoma Multiforme Based on Transcriptome and Epigenome
Cited by: 6
Author(s): Hui Xie, Ce Yuan, Jinjiang Li, Zhaoyang Li, Wei-Cheng Lu
Software Mentions: 4
Published: over 5 years ago

10.1186/s12885-021-08478-0

Ferroptosis-related gene signature predicts the prognosis in Oral squamous cell carcinoma patients
Cited by: 18
Author(s): Hongyu Li, Xiliu Zhang, Yi Chen, Yi He, Xun Chen, Wei Zhao, Dongsheng Yu
Software Mentions: 4
Published: about 5 years ago

10.1186/s12885-020-07058-y

Immune landscape of human prostate cancer: immune evasion mechanisms and biomarkers for personalized immunotherapy
Cited by: 25
Author(s): Mayassa J. Bou‐Dargham, Linlin Sha, Qing‐Xiang Amy Sang, Jinfeng Zhang
Software Mentions: 4
Published: about 6 years ago

10.1186/s13046-019-1228-6

Extracellular lipid loading augments hypoxic paracrine signaling and promotes glioma angiogenesis and macrophage infiltration
Cited by: 18
Author(s): Svenja Offer, Julien A. Menard, Julio Enríquez Pérez, Kelin Gonçalves de Oliveira, Vineesh Indira Chandran, Martin Johansson, Anna Bång-Rudenstam, Peter Siesjö, Anna Ebbesson, Ingrid Hedenfalk, Pia C. Sundgren, Anna Darabi, Mattias Belting
Software Mentions: 4
Published: about 7 years ago

10.3389/fmicb.2020.554105

Diverse Bacterial Communities From Qaidam Basin of the Qinghai–Tibet Plateau: Insights Into Variations in Bacterial Diversity Across Different Regions
Cited by: 6
Author(s): Wei Zhang, Ali Bahadur, Gaosen Zhang, Binglin Zhang, Xiukun Wu, Tuo Chen, Guangxiu Lu
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12915-020-00927-9

Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp
Cited by: 29
Author(s): Sarah Farhat, Phuong Thi Le, Ehsan Kayal, Benjamin Noël, Estelle Bigeard, Matthieu Le Corre, Florian Maumus, Isabelle Florent, Adriana Alberti, Jean‐Marc Aury, Tristan Barbeyron, Ruibo Cai, Corinne Da Silva, Benjamin Istace, Karine Labadie, Dominique Marie, Jonathan Mercier, Tsinda Rukwavu, Jeremy Szymczak, Thierry Tonon, Catharina Alves‐de‐Souza, Pierre Rouzé, Yves Van de Peer, Patrick Wincker, Stéphane Rombauts, Betina M. Porcel, Laure Guillou
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0187079

Immune related gene expression in worker honey bee (Apis mellifera carnica) pupae exposed to neonicotinoid thiamethoxam and Varroa mites (Varroa destructor)
Cited by: 36
Author(s): Tanja Tesovnik, Ivanka Cizelj, Minja Zorc, Manuela Čitar, Janko Božič, Gordana Glavan, Mojca Narat
Software Mentions: 4
Published: almost 9 years ago

10.3389/fmicb.2021.620002

AMRmap: An Interactive Web Platform for Analysis of Antimicrobial Resistance Surveillance Data in Russia
Cited by: 24
Author(s): Alexey Yu. Kuzmenkov, Ivan V. Trushin, Alina G. Vinogradova, Andrey A. Avramenko, М В Сухорукова, Surbhi Malhotra-Kumar, А В Дехнич, Mikhail V. Edelstein, Roman Kozlov
Software Mentions: 4
Published: over 5 years ago

10.3389/fneur.2021.682535

New-Onset Postoperative Seizures in Patients With Diffuse Gliomas: A Risk Assessment Analysis
Cited by: 3
Author(s): Lianwang Li, Guanzhang Li, Fang Sun, Kenan Zhang, Ruoyu Huang, Yinyan Wang, Chuanbao Zhang, Yiming Li, Wei Zhang, Zhong Zhang, Jin Wei Qiang, Dabiao Zhou, Xing Fan, Tao Jiang
Software Mentions: 4
Published: about 5 years ago

10.1186/s13046-019-1403-9

IFN-gamma-induced PD-L1 expression in melanoma depends on p53 expression
Cited by: 93
Author(s): Alexander Thiem, Sonja Hesbacher, Hermann Kneitz, Teresa di Primio, Markus V. Heppt, Heike M. Hermanns, Matthias Goebeler, Svenja Meierjohann, Roland Houben, David Schrama
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12915-021-01153-7

Skin-penetrating nematodes exhibit life-stage-specific interactions with host-associated and environmental bacteria
Cited by: 4
Author(s): Ivan N Chavez, Taylor M Brown, Adrien Assié, Astra S. Bryant, Buck S. Samuel, Elissa A. Hallem
Software Mentions: 4
Published: almost 5 years ago

10.3389/fneur.2020.00331

Evidence of a Recessively Inherited CCN3 Mutation as a Rare Cause of Early-Onset Parkinsonism
Cited by: 1
Author(s): Steven Bentley, Suliman Khan, Marco Öchsner, Susitha Premarathne, Zain Aslam, Javed Fowdar, Jamila Iqbal, Muhammad Naeem, Christopher Love, Stephen A. Wood, George D. Mellick, Alex M. Sykes
Software Mentions: 4
Published: over 6 years ago

10.18632/aging.202765

Pan-cancer analysis identifies ITIH1 as a novel prognostic indicator for hepatocellular carcinoma
Cited by: 7
Author(s): Q Q Chang, Ting Mao, Tao Yan, Tao Dong, Xuan-xuan Tang, Ge Gao, Zi‐jun Xu
Software Mentions: 4
Published: over 5 years ago

10.1186/s12915-021-01104-2

A novel plant-fungal association reveals fundamental sRNA and gene expression reprogramming at the onset of symbiosis
Cited by: 7
Author(s): Ena Šečić, Silvia Zanini, Daniel Wibberg, Lukas Jelonek, Tobias Busche, Jörn Kalinowski, Sabrine Nasfi, Jennifer Thielmann, Jafargholi Imani, Jens Steinbrenner, Karl‐Heinz Kogel
Software Mentions: 4
Published: about 5 years ago

10.3389/fimmu.2021.679458

Comparative Proteomic Analysis Reveals Varying Impact on Immune Responses in Phorbol 12-Myristate-13-Acetate-Mediated THP-1 Monocyte-to-Macrophage Differentiation
Cited by: 21
Author(s): Sneha M. Pinto, Hera Kim, Yashwanth Subbannayya, Miriam S. Giambelluca, Korbinian Bösl, Liv Ryan, Animesh Sharma, Richard K. Kandasamy
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0199664

The presence of genetic risk variants within PTPN2 and PTPN22 is associated with intestinal microbiota alterations in Swiss IBD cohort patients
Cited by: 32
Author(s): Bahtiyar Yılmaz, Marianne R. Spalinger, Luc Biedermann, Yannick Franc, Nicolas Fournier, Jean‐Benoît Rossel, Pascal Juillerat, Gerhard Rogler, Andrew J. Macpherson, Michael Scharl
Software Mentions: 4
Published: about 8 years ago

10.1186/s12915-020-00860-x

Spatial and temporal modulation of enterotoxigenic E. coli H10407 pathogenesis and interplay with microbiota in human gut models
Cited by: 15
Author(s): Charlène Roussel, Kim De Paepe, Wessam Galia, Jana De Bodt, Sandrine Chalancon, Françoise Leriche, Nathalie Ballet, Sylvain Denis, Monique Alric, Tom Van de Wiele, Stéphanie Blanquet‐Diot
Software Mentions: 4
Published: almost 6 years ago

10.1128/AEM.02673-20

The Effects of Soil Depth on the Structure of Microbial Communities in Agricultural Soils in Iowa (United States)
Cited by: 53
Author(s): Jingjie Hao, Yen Ning Chai, Lucas Dantas Lopes, Raziel A. Ordóñez, Emily E. Wright, Sotirios Archontoulis, Daniel P. Schachtman
Software Mentions: 4
Published: over 5 years ago

10.1186/s13046-021-02092-5

Activin-A impedes the establishment of CD4+ T cell exhaustion and enhances anti-tumor immunity in the lung
Cited by: 5
Author(s): Ioannis Morianos, Aikaterini Tsitsopoulou, Konstantinos Potaris, Dimitrios Valakos, Ourania Fari, Giannis Vatsellas, Clementine Bostantzoglou, Andreas Photiades, Mina Gaga, Georgina Xanthou, Maria Semitekolou
Software Mentions: 4
Published: almost 5 years ago

10.1186/s13046-021-02122-2

Mutant NPM1-regulated lncRNA HOTAIRM1 promotes leukemia cell autophagy and proliferation by targeting EGR1 and ULK3
Cited by: 19
Author(s): Yipei Jing, Xueke Jiang, Lei Li, Meixi Peng, Jun Ren, Qiaoling Xiao, Tao Yao, Yonghong Tao, Junpeng Huang, Lu Wang, Yuting Tang, Zailin Yang, Yang Zhou, Ling Zhang
Software Mentions: 4
Published: almost 5 years ago

10.1084/jem.20170412

A multidimensional blood stimulation assay reveals immune alterations underlying systemic juvenile idiopathic arthritis
Cited by: 43
Author(s): Alma-Martina Cepika, Romain Banchereau, Élodie Segura, Marina Ohouo, Brandi L. Cantarel, Kristina Goller, V. Ashley Cantrell, Emily Ruchaud, Elizabeth Gatewood, Phuong Nguyen, Jin Gu, Esperanza Anguiano, Sandra Zurawski, Jeanine Baisch, Marilynn Punaro, Nicole Baldwin, Gerlinde Obermoser, Karolina Palucka, Jacques Banchereau, Sebastián Amigorena, Virginia Pascual
Software Mentions: 4
Published: almost 9 years ago

10.1084/jem.20190430

An anti-CRF antibody suppresses the HPA axis and reverses stress-induced phenotypes
Cited by: 7
Author(s): Hunter S. Futch, Karen N. McFarland, Brenda D. Moore, M. Zino Kuhn, Benoit I. Giasson, Thomas B. Ladd, Karen A. Scott, Melanie R. Shapiro, Rachel L. Nosacka, Marshall S. Goodwin, Yong Ran, Pedro Cruz, Doojin Ryu, Cara L. Croft, Yona Levites, Christopher Janus, Paramita Chakrabarty, Andrew R. Judge, Todd M. Brusko, Annette D. de Kloet, Eric G. Krause, Todd E. Golde
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0159392

Towards a Collaborative Research: A Case Study on Linking Science to Farmers’ Perceptions and Knowledge on Arabica Coffee Pests and Diseases and Its Management
Cited by: 30
Author(s): Theresa Liebig, Laurence Jassogne, Eric Rahn, Peter Läderach, Hans‐Michael Poehling, Patrick Kucel, Piet J.A. van Asten, Jacques Avelino
Software Mentions: 4
Published: about 10 years ago

10.1038/s41420-021-00462-8

NR5A2 transcriptional activation by BRD4 promotes pancreatic cancer progression by upregulating GDF15
Cited by: 10
Author(s): Feng Guo, Yingke Zhou, Hui Guo, Dianyun Ren, Xin Jin, Heshui Wu
Software Mentions: 4
Published: over 5 years ago

10.1128/AEM.02177-20

Identification of Natural Mutations Responsible for Altered Infection Phenotypes of Salmonella enterica Clinical Isolates by Using Cell Line Infection Screens
Cited by: 5
Author(s): Rafał Kolenda, Michał Burdukiewicz, Marcjanna Wimonć, Adrianna Aleksandrowicz, Aamir Ali, István Szabó, Karsten Tedin, Josefin Bartholdson Scott, Derek Pickard, Peter Schierack
Software Mentions: 4
Published: over 5 years ago

10.1038/s41420-021-00473-5

The role of ferroptosis in breast cancer patients: a comprehensive analysis
Cited by: 54
Author(s): Zeng-Hong Wu, Yun Tang, Hong Yu, Huadong Li
Software Mentions: 4
Published: over 5 years ago

10.1186/s12859-021-04180-x

Profile hidden Markov model sequence analysis can help remove putative pseudogenes from DNA barcoding and metabarcoding datasets
Cited by: 15
Author(s): Teresita M. Porter, Mehrdad Hajibabaei
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2019.00348

Mycobiome Diversity in Traditionally Prepared Starters for Alcoholic Beverages in India by High-Throughput Sequencing Method
Cited by: 21
Author(s): Shankar Prasad Sha, Mangesh V. Suryavanshi, Jyoti Prakash Tamang
Software Mentions: 4
Published: over 7 years ago

10.1186/s12859-021-04120-9

FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences
Cited by: 15
Author(s): Sagnik Banerjee, Priyanka Bhandary, Margaret R. Woodhouse, Taner Z. Sen, Roger P. Wise, Carson M. Andorf
Software Mentions: 4
Published: over 5 years ago

10.12688/f1000research.27284.2

What are the long-term symptoms and complications of COVID-19: a protocol for a living systematic review
Cited by: 3
Author(s): Melina Michelen, Hung-Yuan Cheng, Lakshmi Manoharan, Natalie Elkheir, Andrew Dagens, Claire Hastie, Margaret O’Hara, Jake Suett, Dania Dahmash, Paulina Bugaeva, Ishmeala Rigby, Daniel Munblit, Eli Harriss, Amanda Burls, Carol Foote, Janet T. Scott, Gail Carson, Piero Olliaro, Louise Sigfrid, Charitini Stavropoulou
Software Mentions: 4
Published: almost 5 years ago

10.12688/f1000research.4510.2

Cytoscape tools for the web age: D3.js and Cytoscape.js exporters
Cited by: 38
Author(s): Keiichiro Ono, Barry Demchak, Trey Ideker
Software Mentions: 4
Published: almost 12 years ago

10.1371/journal.pone.0217600

Exploration of antibiotic resistance risks in a veterinary teaching hospital with Oxford Nanopore long read sequencing
Cited by: 15
Author(s): Kanishka Indiwari Kamathewatta, Rhys N. Bushell, Neil D. Young, Mark Stevenson, Helen Billman‐Jacobe, Glenn F. Browning, Marc S. Marenda
Software Mentions: 4
Published: about 7 years ago

10.12688/f1000research.15789.2

TRGAted: A web tool for survival analysis using protein data in the Cancer Genome Atlas.
Cited by: 18
Author(s): Nicholas Borcherding, Nicholas L. Bormann, Andrew P. Voigt, Weizhou Zhang
Software Mentions: 4
Published: almost 8 years ago

10.1002/2211-5463.13130

CCR7 and its related molecules may be potential biomarkers of pulmonary arterial hypertension
Cited by: 5
Author(s): Mengsi Cai, Xiuchun Li, Haoru Dong, Ying Wang, Xiaoying Huang
Software Mentions: 4
Published: over 5 years ago

10.12688/f1000research.10016.1

Environmental volunteer well-being: Managers’ perception and actual well-being of volunteers
Cited by: 9
Author(s): Gitte Kragh, Richard Stafford, Susanna Curtin, Anita Díaz
Software Mentions: 4
Published: almost 10 years ago

10.3389/fimmu.2019.00555

Preferential Infiltration of Unique Vγ9Jγ2-Vδ2 T Cells Into Glioblastoma Multiforme
Cited by: 21
Author(s): Mijeong Lee, Chanho Park, Jeongmin Woo, Jin-Ho Kim, Inseong Kho, Do‐Hyun Nam, Woong-Yang Park, Yeonsoo Kim, Doo‐Sik Kong, Hye Won Lee, Tae Jin Kim
Software Mentions: 4
Published: over 7 years ago

10.1093/femsec/fiab049

Factors influencing the biodiversity of three microbial groups within and among islands of the Baltic Sea
Cited by: 5
Author(s): Anette Teittinen, Leena Virta, Mingjia Li, Jianjun Wang
Software Mentions: 4
Published: over 5 years ago

10.12688/f1000research.6925.1

GOsummaries: an R Package for Visual Functional Annotation of Experimental Data
Cited by: 71
Author(s): Raivo Kolde, Jaak Vilo
Software Mentions: 4
Published: about 11 years ago

10.1371/journal.pone.0186118

Finding the signal in the noise: Could social media be utilized for early hospital notification of multiple casualty events?
Cited by: 10
Author(s): Rachael A. Callcut, Sara Moore, Glenn K. Wakam, Alan Hubbard, Mitchell J. Cohen
Software Mentions: 4
Published: almost 9 years ago

10.1038/s12276-021-00627-6

Gut microbiota restoration through fecal microbiota transplantation: a new atopic dermatitis therapy
Cited by: 36
Author(s): Jong-Hwa Kim, Ki‐Young Kim, Wonyong Kim
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0179581

Bioinformatic training needs at a health sciences campus
Cited by: 8
Author(s): Jeffrey C. Oliver
Software Mentions: 4
Published: about 9 years ago

10.1093/femsec/fix126

Community structure of rare methanogenic archaea: insight from a single functional group
Cited by: 15
Author(s): Shuai Yang, Matthias Winkel, Dirk Wagner, Susanne Liebner
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0234050

Characterizing the microbiome of ectoparasitic louse flies feeding on migratory raptors
Cited by: 4
Author(s): Rebecca A. McCabe, Joseph P. Receveur, Jennifer L. Houtz, Kayli L. Thomas, M. Eric Benbow, Jennifer L. Pechal, John R. Wallace
Software Mentions: 4
Published: about 6 years ago

10.1186/s40164-020-00181-3

The global, regional, and national burden of kidney cancer and attributable risk factor analysis from 1990 to 2017
Cited by: 23
Author(s): Xia Bai, Ming Yi, Bing Dong, Xinhua Zheng, Kongming Wu
Software Mentions: 4
Published: almost 6 years ago

10.3390/ijerph16111919

Effects of Small Gaps on the Relationship Among Soil Properties, Topography, and Plant Species in Subtropical Rhododendron Secondary Forest, Southwest China
Cited by: 7
Author(s): Fenghua Tang, Wenxuan Quan, Chaochan Li, Xianfei Huang, Xianliang Wu, Qiaoan Yang, Yannan Pan, Tayan Xu, Chenyu Qian, Yunbing Gu
Software Mentions: 4
Published: about 7 years ago

10.3390/cancers13051079

EphB6 Regulates TFEB-Lysosomal Pathway and Survival of Disseminated Indolent Breast Cancer Cells
Cited by: 10
Author(s): Manuela Zangrossi, Patrizia Romani, Probir Chakravarty, Colin D.H. Ratcliffe, Steven Hooper, Martina Dori, Mattia Forcato, Silvio Bicciato, Sirio Dupont, Erik Sahai, Marco Montagner
Software Mentions: 4
Published: over 5 years ago

10.1007/s10493-018-0320-5

Life-history consequences of bidirectional selection for male morph in a male-dimorphic bulb mite
Cited by: 4
Author(s): Tom P. G. Van den Beuken, Isabel M. Smallegange
Software Mentions: 4
Published: almost 8 years ago

10.3390/foods10081826

Bacterial Community of Grana Padano PDO Cheese and Generical Hard Cheeses: DNA Metabarcoding and DNA Metafingerprinting Analysis to Assess Similarities and Differences
Cited by: 6
Author(s): Miriam Zago, Lia Rossetti, Tommaso Bardelli, Domenico Carminati, Nelson Espinoza N., Giorgio Giraffa
Software Mentions: 4
Published: about 5 years ago

10.1111/evo.13865

Altitude and life‐history shape the evolution ofHeliconiuswings
Cited by: 25
Author(s): Gabriela Montejo‐Kovacevich, Jennifer E. Smith, Joana I. Meier, Caroline Bacquet, Eva Whiltshire-Romero, Nicola J. Nadeau, Chris D. Jiggins
Software Mentions: 4
Published: almost 7 years ago

10.1002/evl3.243

Larger cells have relatively smaller nuclei across the Tree of Life
Cited by: 11
Author(s): Martino E. Malerba, Dustin J. Marshall
Software Mentions: 4
Published: about 5 years ago

10.3389/fcell.2020.00688

The Construction and Analysis of ceRNA Network and Patterns of Immune Infiltration in Colon Adenocarcinoma Metastasis
Cited by: 30
Author(s): Zhengyan Chang, Runzhi Huang, Wanting Fu, Jiehan Li, Guo Ji, Jinglei Huang, Weijun Shi, Huabin Yin, Weifeng Wang, Tong Meng, Zongqiang Huang, Qing Wei, Huanlong Qin
Software Mentions: 4
Published: about 6 years ago

10.3389/fimmu.2018.01829

Human Bone Marrow-Resident Natural Killer Cells Have a Unique Transcriptional Profile and Resemble Resident Memory CD8+ T Cells
Cited by: 28
Author(s): Janine Melsen, Gertjan Lugthart, Carly Vervat, Szymon M. Kiełbasa, Sander A.J. van der Zeeuw, Henk P.J. Buermans, Monique M. van Ostaijen-ten Dam, Arjan C. Lankester, Marco W. Schilham
Software Mentions: 4
Published: about 8 years ago

10.1111/eva.12825

Signatures of adaptive divergence among populations of an avian species of conservation concern
Cited by: 10
Author(s): Shawna J. Zimmerman, Cameron L. Aldridge, Kevin P. Oh, Robert S. Cornman, Sara J. Oyler‐McCance
Software Mentions: 4
Published: about 7 years ago

10.1111/eva.13049

Using genetic relatedness to understand heterogeneous distributions of urban rat‐associated pathogens
Cited by: 9
Author(s): Kaylee A. Byers, Tom R Booker, Matthew Combs, Chelsea G. Himsworth, Jason Munshi‐South, David M. Patrick, Michael C. Whitlock
Software Mentions: 4
Published: about 6 years ago

10.3389/fmolb.2021.708127

Glucotoxicity Activation of IL6 and IL11 and Subsequent Induction of Fibrosis May Be Involved in the Pathogenesis of Islet Dysfunction
Cited by: 6
Author(s): Laiwei Lu, Lili Zhuang, Xiaodong Shen, Liyong Yang
Software Mentions: 4
Published: about 5 years ago

10.1111/eva.13234

Association of putatively adaptive genetic variation with climatic variables differs between a parasite and its host
Cited by: 5
Author(s): Sheree J. Walters, Todd Robinson, Margaret Byrne, Grant Wardell‐Johnson, Paul Nevill
Software Mentions: 4
Published: over 5 years ago

10.1111/eva.12407

Single nucleotide polymorphisms to discriminate different classes of hybrid between wild Atlantic salmon and aquaculture escapees
Cited by: 27
Author(s): Victoria L. Pritchard, Jaakko Erkinaro, Matthew Kent, Eero Niemelä, Panu Orell, Sigbjørn Lien, Craig R. Primmer
Software Mentions: 4
Published: about 10 years ago

10.1038/s41419-020-2289-3

Oncogene-dependent function of BRG1 in hepatocarcinogenesis
Cited by: 21
Author(s): Pan Wang, Xinhua Song, Dan Cao, Kairong Cui, Jingxiao Wang, Kirsten Utpatel, Runze Shang, Haichuan Wang, Li Che, Matthias Evert, Keji Zhao, Diego F. Calvisi, Xin Chen
Software Mentions: 4
Published: over 6 years ago

10.1111/eva.12894

Mate choice, reproductive success and inbreeding in white rhinoceros: New insights for conservation management
Cited by: 13
Author(s): Petra Kretzschmar, Hailie Auld, Peter T. Boag, Udo Gansloßer, C. Scott, Peter J. Van Coeverden de Groot, Alexandre Courtiol
Software Mentions: 4
Published: over 6 years ago

10.1128/AEM.01003-19

Genomic and Seasonal Variations among Aquatic Phages Infecting the Baltic Sea Gammaproteobacterium Rheinheimera sp. Strain BAL341
Cited by: 20
Author(s): Emelie Nilsson, K. Li, Jimmy Fridlund, Sigitas Šulčius, Carina Bunse, Christofer M. G. Karlsson, Markus V. Lindh, Daniel Lundin, Jarone Pinhassi, Karin Holmfeldt
Software Mentions: 4
Published: almost 7 years ago

10.3390/ijerph16132334

Validation of a Short-Form Version of the Danish Need for Recovery Scale against the Full Scale
Cited by: 7
Author(s): Matthew L Stevens, Patrick Crowley, Anne Helene Garde, Ole Steen Mortensen, Clas‐Håkan Nygård, Andreas Holtermann
Software Mentions: 4
Published: about 7 years ago

10.1371/journal.pone.0248759

Impact of elevated air temperature and drought on pollen characteristics of major agricultural grass species
Cited by: 6
Author(s): Stephan Jung, Nicole Estrella, Michael W. Pfaffl, Stephan Hartmann, Franziska Ewald, Annette Menzel
Software Mentions: 4
Published: over 5 years ago

10.1111/eva.12796

Adaptive variation for growth and resistance to a novel pathogen along climatic gradients in a foundation tree
Cited by: 21
Author(s): Collin W. Ahrens, Richard Mazanec, T. Paap, Katinka X. Ruthrof, Anthea Challis, G.E.St.J. Hardy, Margaret Byrne, David T. Tissue, Paul D. Rymer
Software Mentions: 4
Published: over 7 years ago

10.3389/fmolb.2021.671309

Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
Cited by: 21
Author(s): Shaheerah Khan, Atimukta Jha, Amaresh C. Panda, Anshuman Dixit
Software Mentions: 4
Published: over 5 years ago

10.3389/fcell.2021.666376

MCM4 Is a Novel Biomarker Associated With Genomic Instability, BRCAness Phenotype, and Therapeutic Potentials in Soft-Tissue Sarcoma
Cited by: 2
Author(s): Qi Liu, Qiyuan Bao, Yanguang Xu, Yucheng Fu, Zhijian Jin, Jun Wang, Weibin Zhang, Yuhui Shen
Software Mentions: 4
Published: about 5 years ago

10.3389/fcimb.2017.00317

Global Epidemiology of Dengue Outbreaks in 1990–2015: A Systematic Review and Meta-Analysis
Cited by: 220
Author(s): Congcong Guo, Zixing Zhou, Zihao Wen, Yumei Liu, Chengli Zeng, Di Xiao, Minglin Ou, Yuge Han, Shiqi Huang, Dandan Liu, Xiaohong Ye, Xiaoqian Zou, Jing Wu, Huanyu Wang, Eddy Y. Zeng, Chunxia Jing, Guang Yang
Software Mentions: 4
Published: about 9 years ago

10.3390/ijerph18042019

Body Composition, Training Volume/Pattern and Injury Status of Slovenian Adolescent Female High-Performance Gymnasts
Cited by: 4
Author(s): Boštjan Jakše, Barbara Jakše, Ivan Čuk, Dorica Šajber
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.4837

The integrative effects of behavior and morphology on amphibian movement
Cited by: 10
Author(s): Evan M. Bredeweg, Anita T. Morzillo, Lindsey L. Thurman, Tiffany S. Garcia
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2019.00715

Response of Lactobacillus plantarum WCFS1 to the Gram-Negative Pathogen-Associated Quorum Sensing Molecule N-3-Oxododecanoyl Homoserine Lactone
Cited by: 16
Author(s): Joseph R. Spangler, Scott N. Dean, Dagmar H. Leary, Scott A. Walper
Software Mentions: 4
Published: over 7 years ago

10.3389/fimmu.2021.691725

Severe COVID-19 Recovery Is Associated with Timely Acquisition of a Myeloid Cell Immune-Regulatory Phenotype
Cited by: 29
Author(s): A.C. Trombetta, Guilherme B. Farias, André M. C. Gomes, Ana Godinho‐Santos, Pedro Rosmaninho, Carolina M. Conceição, Joel Laia, Diana Santos, Afonso R. M. Almeida, Catarina Mota, Andréia Gomes, María Luisa Madueño Serrano, Marc Veldhoen, Ana E. Sousa, S. Fernandes
Software Mentions: 4
Published: about 5 years ago

10.3389/fcimb.2020.00485

Gut Microbiota-Metabolome Changes in Children With Diarrhea by Diarrheagenic E. coli
Cited by: 16
Author(s): Pablo Gallardo, Mariana Izquierdo, Roberto Vidal, Francisco Soto, Juan C. Ossa, Mauricio J. Farfán
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12859-019-3201-y

Manhattan++: displaying genome-wide association summary statistics with multiple annotation layers
Cited by: 4
Author(s): Christopher Grace, Martin Farrall, Hugh Watkins, Anuj Goel
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.2794

Synergistic effects of floral phytochemicals against a bumble bee parasite
Cited by: 46
Author(s): Evan C. Palmer‐Young, Ben M. Sadd, Rebecca E. Irwin, Lynn S. Adler
Software Mentions: 4
Published: over 9 years ago

10.3390/ijerph17010256

Salivary Microbiome and Cigarette Smoking: A First of Its Kind Investigation in Jordan
Cited by: 32
Author(s): Walid Al-Zyoud, Rima Hajjo, Ahmed Abu-Siniyeh, Sarah Hajjaj
Software Mentions: 4
Published: over 6 years ago

10.1128/AEM.01346-19

Violet-Blue Light Arrays at 405 Nanometers Exert Enhanced Antimicrobial Activity for Photodisinfection of Monomicrobial Nosocomial Biofilms
Cited by: 11
Author(s): Fenella D. Halstead, Mohammed Hadis, Neil F. Marley, Kristian Brock, Michael Milward, Paul R. Cooper, Beryl Oppenheim, William M. Palin
Software Mentions: 4
Published: almost 7 years ago

10.1002/ece3.6989

Effects of maternal genotypic identity and genetic diversity of the red mangrove Rhizophora mangle on associated soil bacterial communities: A field‐based experiment
Cited by: 9
Author(s): Hayley Craig, John Paul Kennedy, Donna J. Devlin, Richard D. Bardgett, Jennifer K. Rowntree
Software Mentions: 4
Published: almost 6 years ago

10.3389/fcimb.2020.00086

Methodological Insight Into Mosquito Microbiome Studies
Cited by: 12
Author(s): Sonia M. Rodríguez‐Ruano, Eliška Juhaňáková, Jakub Vávra, Eva Nováková
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2017.02379

Responses of Microbial Community Composition to Temperature Gradient and Carbon Steel Corrosion in Production Water of Petroleum Reservoir
Cited by: 35
Author(s): Xiaoxiao Li, Tao Yang, Serge Maurice Mbadinga, Jinfeng Liu, Shi‐Zhong Yang, Ji‐Dong Gu, Bo‐Zhong Mu
Software Mentions: 4
Published: over 8 years ago

10.3389/fimmu.2020.01982

Human Regulatory Dendritic Cells Develop From Monocytes in Response to Signals From Regulatory and Helper T Cells
Cited by: 10
Author(s): Xiangyue Zhang, Pingping Zheng, Tyler R. Prestwood, Hong Zhang, Yaron Carmi, Lorna Tolentino, Nancy Wu, Okmi Choi, Daniel A. Winer, Samuel Strober, Eun‐Suk Kang, Michael N. Alonso, Edgar G. Engleman
Software Mentions: 4
Published: about 6 years ago

10.1128/AEM.00415-18

Shewanella oneidensis MR-1 Utilizes both Sodium- and Proton-Pumping NADH Dehydrogenases during Aerobic Growth
Cited by: 20
Author(s): Kody L. Duhl, Nicholas M. Tefft, Michaela A. TerAvest
Software Mentions: 4
Published: about 8 years ago

10.1371/journal.pone.0221694

Capability for arsenic mobilization in groundwater is distributed across broad phylogenetic lineages
Cited by: 15
Author(s): Robert Danczak, Michael D. Johnston, Chris Kenah, Michael T. Slattery, Michael J. Wilkins
Software Mentions: 4
Published: almost 7 years ago

10.3389/fimmu.2019.01253

Signal Integration of IFN-I and IFN-II With TLR4 Involves Sequential Recruitment of STAT1-Complexes and NFκB to Enhance Pro-inflammatory Transcription
Cited by: 32
Author(s): Anna Piaszyk-Borychowska, Lajos Széles, Attila Csermely, Hsüch‐Ching Chiang, Joanna Wesoły, Chien‐Kuo Lee, László Nagy, Hans A.R. Bluyssen
Software Mentions: 4
Published: about 7 years ago

10.3390/ijerph17031111

Short-Term Associations of Fine Particulate Matter and Synoptic Weather Types with Cardiovascular Mortality: An Ecological Time-Series Study in Shanghai, China
Cited by: 11
Author(s): Tian Qing, Mei Li, Scott Montgomery, Bo Fang, Chunfang Wang, Tian Xia, Yang Cao
Software Mentions: 4
Published: over 6 years ago

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