cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3390/v13081540

Multi-Tissue Transcriptomic-Informed In Silico Investigation of Drugs for the Treatment of Dengue Fever Disease
Cited by: 1
Author(s): Beatríz Sierra, Ana C. Magalhães, Daniel Lemos Soares, Bruno Cavadas, Ana B. Pérez, Mayling Álvarez, Eglys Aguirre, Claudia Bracho, Luı́sa Pereira, María G. Guzmán
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pntd.0009397

Global patterns of aegyptism without arbovirus
Cited by: 10
Author(s): Mark F. Olson, José G. Juárez, Moritz U. G. Kraemer, Jane P. Messina, Gabriel L. Hamer
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0252508

Network pharmacology and molecular docking study on the mechanism of colorectal cancer treatment using Xiao-Chai-Hu-Tang
Cited by: 23
Author(s): Jingyun Jin, Bin Chen, Xiangyang Zhan, Zhiyi Zhou, Hui Liu, Yun Dong
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0238764

A comparative study of the gut microbiome in Egyptian patients with Type I and Type II diabetes
Cited by: 24
Author(s): Sahar Radwan, Darby Gilfillan, Bridget Eklund, Hend M. Radwan, Nagwan Galal El Menofy, Justin Lee, Marylee Kapuscinski, Zaid Abdo
Software Mentions: 5
Published: almost 6 years ago

10.1016/j.wroa.2019.100033

Organic substrate diffusibility governs microbial community composition, nutrient removal performance and kinetics of granulation of aerobic granular sludge
Cited by: 74
Author(s): Manuel Layer, Aline Sondra Adler, Eva Reynaert, Antonio Hernández, Marco Pagni, Eberhard Morgenroth, Christof Holliger, Nicolas Derlon
Software Mentions: 5
Published: about 7 years ago

10.1002/2015WR017519

Water sources and mixing in riparian wetlands revealed by tracers and geospatial analysis
Cited by: 36
Author(s): J. S. Lessels, Doerthe Tetzlaff, Christian Birkel, Jonathan Dick, Chris Soulsby
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0153160

SWATH2stats: An R/Bioconductor Package to Process and Convert Quantitative SWATH-MS Proteomics Data for Downstream Analysis Tools
Cited by: 39
Author(s): Peter Blattmann, Moritz Heusel, Ruedi Aebersold
Software Mentions: 5
Published: over 10 years ago

10.3390/pharmaceutics13020264

Evaluation of Current Amikacin Dosing Recommendations and Development of an Interactive Nomogram: The Role of Albumin
Cited by: 3
Author(s): Jonás Samuel Pérez-Blanco, Elena Fernández, María Victoria Martínez Calvo, José M. Lanao, Ana Martín-Suárez
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0051292

Characterisation and Validation of Insertions and Deletions in 173 Patient Exomes
Cited by: 9
Author(s): Francesco Lescai, Silvia Bonfiglio, Chiara Bacchelli, Estelle Chanudet, Aoife Waters, Sanjay M. Sisodiya, Dalia Kasperavičiūtė, Julie Williams, Denise Harold, John Hardy, Robert Kleta, Sebahattin Çırak, Richard Williams, John C. Achermann, John Anderson, David P. Kelsell, Tom Vulliamy, Henry Houlden, Nicholas W. Wood, Una Marie Sheerin, Gian Paolo Tonini, Donna S. Mackay, Khalid Hussain, Jane C. Sowden, Veronica A. Kinsler, Justyna Osinska, Tony Brooks, Mike Hubank, Philip L. Beales, Elia Stupka
Software Mentions: 5
Published: over 13 years ago

10.1371/journal.pone.0216758

An integrated insight into the response of bacterial communities to anthropogenic contaminants in a river: A case study of the Wonderfonteinspruit catchment area, South Africa
Cited by: 20
Author(s): Karen Jordaan, A. Comeau, Damase P. Khasa, Cornelius Carlos Bezuidenhout
Software Mentions: 5
Published: over 7 years ago

10.7554/eLife.58659

A human ESC-based screen identifies a role for the translated lncRNA LINC00261 in pancreatic endocrine differentiation
Cited by: 22
Author(s): Bjoern Gaertner, Sebastiaan van Heesch, Valentin Schneider-Lunitz, Jana Felicitas Schulz, Franziska Witte, Susanne Blachut, Steven Nguyen, Richard L. Wong, Ileana Matta, Norbert Hübner
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pone.0239480

Horizontal and vertical movements of starry smooth-hound Mustelus asterias in the northeast Atlantic
Cited by: 4
Author(s): Christopher A. Griffiths, Serena Wright, Joana F. Silva, Jim R. Ellis, David Righton, Sophy R. McCully Phillips
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0241231

A taxonomic and molecular survey of the pteridophytes of the Nectandra Cloud Forest Reserve, Costa Rica
Cited by: 7
Author(s): Joel H. Nitta, Atsushi Ebihara, Alan Р. Smith
Software Mentions: 5
Published: almost 6 years ago

10.12688/f1000research.55027.1

rmcorrShiny: A web and standalone application for repeated measures correlation
Cited by: 14
Author(s): Laura R. Marusich, Jonathan Z. Bakdash
Software Mentions: 5
Published: about 5 years ago

10.12688/wellcomeopenres.16374.2

MendelianRandomization v0.5.0: updates to an R package for performing Mendelian randomization analyses using summarized data
Cited by: 55
Author(s): Jim R. Broadbent, Christopher N. Foley, Andrew J. Grant, Amy M. Mason, James R Staley, Stephen Burgess
Software Mentions: 5
Published: over 5 years ago

10.12688/wellcomeopenres.16075.2

A reproducible picture of open access health facility data in Africa and R tools to support improvement
Cited by: 4
Author(s): Andy South, Ahmadou Dicko, Mark Herringer, Peter M. Macharia, Joseph Maina, Emelda A. Okiro, Robert W. Snow, Van der Walt Anelda
Software Mentions: 5
Published: over 5 years ago

10.1111/tpj.14202

Gene networks orchestrated by Me<scp>GI</scp>: a single‐factor mechanism underlying sex determination in persimmon
Cited by: 43
Author(s): Ho Wen Yang, Takashi Akagi, Taiji Kawakatsu, Ryutaro Tao
Software Mentions: 5
Published: over 7 years ago

10.1111/evo.13754

The comparative biogeography of Philippine geckos challenges predictions from a paradigm of climate‐driven vicariant diversification across an island archipelago
Cited by: 20
Author(s): Jamie R. Oaks, Cameron D. Siler, Rafe M. Brown
Software Mentions: 5
Published: over 7 years ago

10.1186/s12957-019-1600-1

Laparoscopic versus open gastrectomy for locally advanced gastric cancer: a systematic review and meta-analysis of randomized controlled studies
Cited by: 63
Author(s): Katharina Beyer, Ann-Kathrin Baukloh, Carsten Kamphues, Hendrik Seeliger, Claus–Dieter Heidecke, Martin E. Kreis, Maciej Patrzyk
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0236426

Cost-effectiveness of real-world administration of chemotherapy and add-on Viscum album L. therapy compared to chemotherapy in the treatment of stage IV NSCLC patients
Cited by: 3
Author(s): Anja Thronicke, Thomas Reinhold, Philipp von Trott, Christian Grah, Burkhard Matthes, Harald Matthes, Friedemann Schad
Software Mentions: 5
Published: about 6 years ago

10.1002/evl3.218

Regional differences in rapid evolution during severe drought
Cited by: 18
Author(s): Daniel N. Anstett, Haley A. Branch, Amy L. Angert
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0239485

Does behavioral thermal tolerance predict distribution pattern and habitat use in two sympatric Neotropical frogs?
Cited by: 9
Author(s): Juan C. Díaz‐Ricaurte, Filipe C. Serrano, Estefany Carolíne Guevara-Molina, Cybele de Oliveira Araújo, Marcio Roberto Martins
Software Mentions: 5
Published: almost 6 years ago

10.7717/peerj.7075

Visual complexity modelling based on image features fusion of multiple kernels
Cited by: 14
Author(s): Carlos Fernández-Lozano, Adrián Carballal, Penousal Machado, Andréa Cynthia Santos, Juan Romero
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0257564

Tree species identity and composition shape the epiphytic lichen community of structurally simple boreal forests over vast areas
Cited by: 7
Author(s): Julian Klein, Matthew Low, Göran Thor, Jörgen Sjögren, Eva Lindberg, Sönke Eggers
Software Mentions: 5
Published: almost 5 years ago

10.1111/eva.12766

Population structure, genetic connectivity, and adaptation in the Olympia oyster ( Ostrea lurida ) along the west coast of North America
Cited by: 35
Author(s): Katherine Silliman
Software Mentions: 5
Published: over 7 years ago

10.1111/eva.12960

Genomic insights into historical population dynamics, local adaptation, and climate change vulnerability of the East Asian Tertiary relict Euptelea (Eupteleaceae)
Cited by: 12
Author(s): Yanan Cao, Shanshan Zhu, Jun Chen, Hans Peter Comes, Ian Wang, Luyao Chen, Shota Sakaguchi, Ying‐Xiong Qiu
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-020-77289-3

Evaluation of the upper airway microbiome and immune response with nasal epithelial lining fluid absorption and nasal washes
Cited by: 4
Author(s): Meghan H. Shilts, Christian Rosas‐Salazar, Christian Edward Cyril Lynch, Andrey Tovchigrechko, Helen H. Boone, Patty Russell, Alexandra Connolly, Kaitlin Costello, Megan D McCollum, Annie Mai, Derek Wiggins, Seesandra V. Rajagopala, Shibu Yooseph, R. Stokes Peebles, Tina V. Hartert, Suman Das
Software Mentions: 5
Published: almost 6 years ago

10.1001/jamanetworkopen.2021.27002

Racial and Ethnic Differences in Cannabis Use Following Legalization in US States With Medical Cannabis Laws
Cited by: 40
Author(s): Sílvia S. Martins, Luís Segura, Natalie S. Levy, Pia M. Mauro, Christine Mauro, Morgan M. Philbin, Deborah S. Hasin
Software Mentions: 5
Published: almost 5 years ago

10.1371/journal.pone.0222937

Forecasting the impact of population ageing on tuberculosis incidence
Cited by: 16
Author(s): Chu-Chang Ku, Peter J Dodd
Software Mentions: 5
Published: almost 7 years ago

10.1371/journal.pone.0201664

Call and be counted! Can we reliably estimate the number of callers in the indri's (Indri indri) song?
Cited by: 17
Author(s): Valeria Torti, Daria Valente, Chiara De Gregorio, Carlo Comazzi, Longondraza Miaretsoa, Jonah Ratsimbazafy, Cristina Giacoma, Marco Gamba
Software Mentions: 5
Published: about 8 years ago

10.1038/s41598-018-25021-7

Quantitative comparison of different iron forms in the temporal cortex of Alzheimer patients and control subjects
Cited by: 39
Author(s): Marjolein Bulk, Louise van der Weerd, Wico Breimer, Н. А. Лебедев, Andrew Webb, Jelle J. Goeman, Roberta J. Ward, Martina Huber, Tjerk H. Oosterkamp, Lucia Bossoni
Software Mentions: 5
Published: over 8 years ago

10.1002/ece3.6657

Alternative reproductive tactics are associated with sperm performance in invasive round goby from two different salinity environments
Cited by: 6
Author(s): León Green, Jan Niemax, Jens‐Peter Herrmann, Axel Temming, Charlotta Kvarnemo
Software Mentions: 5
Published: almost 6 years ago

10.1186/s40425-019-0512-5

Complex inter-relationship of body mass index, gender and serum creatinine on survival: exploring the obesity paradox in melanoma patients treated with checkpoint inhibition
Cited by: 100
Author(s): Girish S. Naik, Sushrut S. Waikar, Alistair E. W. Johnson, Elizabeth I. Buchbinder, Rizwan Haq, F. Stephen Hodi, Jonathan D. Schoenfeld, Patrick A. Ott
Software Mentions: 5
Published: over 7 years ago

10.3389/fmicb.2017.00526

Mosquito Microbiome Dynamics, a Background for Prevalence and Seasonality of West Nile Virus
Cited by: 83
Author(s): Eva Nováková, Douglas C. Woodhams, Sonia M. Rodríguez‐Ruano, Robert M. Brucker, Jonathan W. Leff, Amin Maharaj, Amir Almasi‐Hashiani, Rob Knight, James A. Scott
Software Mentions: 5
Published: over 9 years ago

10.1038/s41598-021-92206-y

Seroprevalence of SARS-CoV-2 antibodies in Saint Petersburg, Russia: a population-based study
Cited by: 15
Author(s): Антон Барчук, Dmitriy Skougarevskiy, Kirill Titaev, Daniil Shirokov, Yulia Raskina, Anastasia Novkunkskaya, Petr Talantov, А. А. Исаев, Ekaterina Pomerantseva, Svetlana Zhikrivetskaya, Lubov Barabanova, Vadim Volkov
Software Mentions: 5
Published: about 5 years ago

10.1002/ece3.5887

Phenotypic plasticity, but not adaptive tracking, underlies seasonal variation in post‐cold hardening freeze tolerance ofDrosophila melanogaster
Cited by: 9
Author(s): Helen M. Stone, Priscilla A. Erickson, Alan O. Bergland
Software Mentions: 5
Published: over 6 years ago

10.1038/s41597-021-00896-w

Generation of a mouse SWATH-MS spectral library to quantify 10148 proteins involved in cell reprogramming
Cited by: 4
Author(s): Uxue Ulanga, Matthew R. Russell, Stefano Patassini, Julie Brazzatti, Ciaren Graham, Anthony D. Whetton, R.L. Graham
Software Mentions: 5
Published: over 5 years ago

10.3389/fgene.2019.01333

A Novel Prognostic Index Based on Alternative Splicing in Papillary Renal Cell Carcinoma
Cited by: 2
Author(s): Zhipeng Wu, Jinhui Liu, Rui Sun, Dongming Chen, Kai Wang, Changchun Cao, Xianlin Xu
Software Mentions: 5
Published: over 6 years ago

10.1016/j.celrep.2018.04.047

Influenza Virus Mounts a Two-Pronged Attack on Host RNA Polymerase II Transcription
Cited by: 68
Author(s): David L.V. Bauer, Michael Tellier, Maira Martínez-Alonso, Takayuki Nojima, Nick J. Proudfoot, Shona Murphy, Ervin Fodor
Software Mentions: 5
Published: over 8 years ago

10.3389/fmicb.2019.02066

Use of RNA and DNA to Identify Mechanisms of Bacterial Community Homogenization
Cited by: 16
Author(s): Kyle Meyer, Ian A. B. Petersen, Elie Tobi, Lisa Körte, Brendan J. M. Bohannan
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-020-76769-w

GIANT: galaxy-based tool for interactive analysis of transcriptomic data
Cited by: 8
Author(s): Jimmy Vandel, Céline Gheeraert, Bart Staels, Jérôme Eeckhoute, Philippe Lefèbvre, Julie Dubois-Chevalier
Software Mentions: 5
Published: almost 6 years ago

10.3389/fmicb.2019.01519

Tree Species Shape Soil Bacterial Community Structure and Function in Temperate Deciduous Forests
Cited by: 57
Author(s): Amélie Dukunde, Dominik Schneider, M. Schmidt, Edzo Veldkamp, Rolf Daniel
Software Mentions: 5
Published: about 7 years ago

10.1007/s00442-021-04977-w

Bank vole alarm pheromone chemistry and effects in the field
Cited by: 1
Author(s): Thorbjörn Sievert, Hannu Ylönen, James D. Blande, Amélie Saunier, Dave van der Hulst, Olga Ylönen, Marko Haapakoski
Software Mentions: 5
Published: about 5 years ago

10.1111/cpr.13117

Prognostic and predictive role of a metabolic rate‐limiting enzyme signature in hepatocellular carcinoma
Cited by: 9
Author(s): Zhangding Wang, Yao Fu, Anliang Xia, Chen Chen, Jiamu Qu, Guifang Xu, Xiaoping Zou, Qiang Wang, Shouyu Wang
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-017-10576-8

Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes
Cited by: 91
Author(s): Alan M. Tonin, José F. Gonçalves, Paulino Bambi, Sheyla Regina Marques Couceiro, Lorrane A. M. Feitoza, Lucas Eugênio Fontana, Neusa Hamada, Luiz Ubiratan Hepp, Vânia G. Lezan-Kowalczuk, Gustavo Figueiredo Marques Leite, Aurea Luiza Lemes-Silva, Leonardo Kleba Lisboa, Rafael Chaves Loureiro, Renato Tavares Martins, Adriana O. Medeiros, Paula B. Morais, Yara Moretto, Patrícia C. A. Oliveria, Evelyn B. Pereira, Lidiane P. Ferreira, Javier Jiménez Pérez, Maurício Mello Petrucio, Deusiano Florêncio dos Reis, Renan de Souza Rezende, Nádia Roque, Luiz E. P. Santos, Ana Emília Siegloch, Gabriela Tonello, Luz Boyero
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-020-76978-3

Bio-fertilizer and rotten straw amendments alter the rhizosphere bacterial community and increase oat productivity in a saline–alkaline environment
Cited by: 20
Author(s): Peina Lu, Luke D. Bainard, Bin Ma, Jinghui Liu
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-021-91425-7

Establishment and assessment of an amplicon sequencing method targeting the 16S-ITS-23S rRNA operon for analysis of the equine gut microbiome
Cited by: 17
Author(s): Yuta Kinoshita, Hidekazu Niwa, Eri Uchida‐Fujii, Toshio Nukada
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2017.01120

The Arbuscular Mycorrhizal Fungus Funneliformis mosseae Alters Bacterial Communities in Subtropical Forest Soils during Litter Decomposition
Cited by: 31
Author(s): Heng Gui, Witoon Purahong, Kevin D. Hyde, Jianchu Xu, Peter E. Mortimer
Software Mentions: 5
Published: about 9 years ago

10.3389/fmicb.2018.00973

A Novel Strategy for Detecting Recent Horizontal Gene Transfer and Its Application to Rhizobium Strains
Cited by: 15
Author(s): Xiangchen Li, Wenjun Tong, Lina Wang, Siddiq Ur Rahman, Gehong Wei, Shiheng Tao
Software Mentions: 5
Published: over 8 years ago

10.3389/fcell.2021.648806

Construction of a Prognostic Immune-Related LncRNA Risk Model for Lung Adenocarcinoma
Cited by: 16
Author(s): Yue Li, Ruoyi Shen, Anqi Wang, Jian Zhao, Jieqi Zhou, Weijie Zhang, Ruochen Zhang, Jianjie Zhu, Zeyi Liu, Jian-An Huang
Software Mentions: 5
Published: over 5 years ago

10.1242/jeb.242158

Effects of early-life conditions on innate immune function in adult zebra finches
Cited by: 2
Author(s): Merijn M. G. Driessen, Maaike A. Versteegh, Yoran H. Gerritsma, B. Irene Tieleman, Ido Pen, Simon Verhulst
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2020.01212

Diverse Microbial Composition of Sourdoughs From Different Origins
Cited by: 50
Author(s): Andrea Comasio, Marko Verce, Simon Van Kerrebroeck, Luc De Vuyst
Software Mentions: 5
Published: about 6 years ago

10.1016/j.isci.2021.103092

The gut microbiota instructs the hepatic endothelial cell transcriptome
Cited by: 11
Author(s): Henning Formes, Joana P. Bernardes, Amrit Mann, Franziska Bayer, Giulia Pontarollo, Klytaimnistra Kiouptsi, Katrin Schäfer, Sebastian Attig, Teodora Nikolova, Thomas G. Hofmann, Jörn M. Schattenberg, Hristo Todorov, Susanne Gerber, Philip Rosenstiel, Tobias Bopp, Felix Sommer, Carsten Reinhardt
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41598-018-22734-7

Transcriptional landscape of human endogenous retroviruses (HERVs) and other repetitive elements in psoriatic skin
Cited by: 11
Author(s): Freddy Lättekivi, Sulev Kõks, Maris Keermann, Ene Reimann, Ele Prans, Kristi Abram, Helgi Silm, Gea Kõks, Külli Kingo
Software Mentions: 5
Published: over 8 years ago

10.3389/fmicb.2018.02077

Revisiting the Taxonomy of the Genus Arcobacter: Getting Order From the Chaos
Cited by: 237
Author(s): Alba Pérez-Cataluña, Nuria Salas-Massó, Ana L. Diéguez, Sabela Balboa, Alberto Lema, Jesús L. Romalde, María José Figueras
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pntd.0007910

Dispersal patterns of Trypanosoma cruzi in Arequipa, Peru
Cited by: 4
Author(s): Alexander S. F. Berry, Renzo Salazar-Sánchez, Ricardo Castillo-Neyra, Katty Borrini-Mayorí, Claudia Arevalo-Nieto, Claudia Chipana-Ramos, Melina Vargas-Maquera, Jenny Ancca-Juárez, César Náquira-Velarde, Michael Z. Levy, Dustin Brisson
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-018-22125-y

Gut microbial composition in patients with psoriasis
Cited by: 130
Author(s): Francisco M. Codoñer, A. Ramírez-Boscá, Eric Climent, Miguel A Carrión-Gutiérrez, Mariano Guerrero, Jose Manuel Pérez-Orquín, José Horga de la Parte, Salvador Genovés, Daniel Ramón, Vicente Navarro-López, Empar Chenoll
Software Mentions: 5
Published: over 8 years ago

10.1111/jeb.13402

Costs of weaponry: Unarmed males sire more offspring than armed males in a male-dimorphic mite
Cited by: 10
Author(s): Tom P. G. Van den Beuken, Chris C. Duinmeijer, Isabel M. Smallegange
Software Mentions: 5
Published: over 7 years ago

10.1016/j.jcmgh.2021.06.004

Impaired Luminal Control of Intestinal Macrophage Maturation in Patients With Ulcerative Colitis During Remission
Cited by: 7
Author(s): Lujain Maasfeh, Anetta Härtlová, Stefan Isaksson, Johanna Sundin, Georgios Mavroudis, Otto Savolainen, Hans Strid, Lena Öhman, Maria K. Magnusson
Software Mentions: 5
Published: over 5 years ago

10.3390/ijms221910297

Circular RNAs Repertoire and Expression Profile during Brassica rapa Pollen Development
Cited by: 10
Author(s): Saeid Babaei, Mohan B. Singh, Prem L. Bhalla
Software Mentions: 5
Published: almost 5 years ago

10.3389/fmicb.2021.569020

Distribution of Hydrogen-Producing Bacteria in Tibetan Hot Springs, China
Cited by: 3
Author(s): Li Ma, Geng Wu, Jian Yang, Liuqin Huang, Dorji Phurbu, Wenjun Li, Hongchen Jiang
Software Mentions: 5
Published: about 5 years ago

10.3390/insects12070584

Intrasexual Vibrational Behavior of Philaenus spumarius in Semi-Field Conditions
Cited by: 5
Author(s): Imane Akassou, Sabina Avosani, Valentina Zaffaroni Caorsi, Vincenzo Verrastro, Marco Ciolli, Valerio Mazzoni
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2021.665858

Multi-Omics Approach Reveals the Potential Core Vaccine Targets for the Emerging Foodborne Pathogen Campylobacter jejuni
Cited by: 6
Author(s): Hai‐Yan Cao, Hanxiao Xu, Ning Cai, Xiang Li, Ren Qiu-fang, Tiantian Zhang, Yusen Zhang, Rui Gao
Software Mentions: 5
Published: about 5 years ago

10.3389/fvets.2020.563140

Real-Time Standard Analysis of Disease Investigation (SADI)—A Toolbox Approach to Inform Disease Outbreak Response
Cited by: 0
Author(s): Paul Bingham, Masako Wada, Mary van Andel, Andrew McFadden, R.L. Sanson, Mark Stevenson
Software Mentions: 5
Published: almost 6 years ago

10.3389/fsurg.2021.665115

Identification and Validation of a Prognostic 5-Protein Signature for Biochemical Recurrence Following Radical Prostatectomy for Prostate Cancer
Cited by: 1
Author(s): Daojun Lv, Zanfeng Cao, Wenjie Li, Haige Zheng, Xiangkun Wu, Yongda Liu, Danan Gu, Guohua Zeng
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-018-19939-1

Acute effects of air pollution on respiratory disease mortalities and outpatients in Southeastern China
Cited by: 46
Author(s): Zhe Mo, Qiang Fu, Lifang Zhang, Danni Lyu, Guangming Mao, Lizhi Wu, Pingwei Xu, Zhifang Wang, Xuejiao Pan, Zhijian Chen, Xiaofeng Wang, Xiaoming Lou
Software Mentions: 5
Published: over 8 years ago

10.3389/fvets.2020.558409

Socially vs. Privately Optimal Control of Livestock Diseases: A Case for Integration of Epidemiology and Economics
Cited by: 5
Author(s): Ângelo Mendes, Daniel T. Haydon, Emma McIntosh, Nick Hanley, Jo E.B. Halliday
Software Mentions: 5
Published: almost 6 years ago

10.3389/fgene.2020.00863

N6-Methyladenosine RNA Methylation Regulators Have Clinical Prognostic Values in Hepatocellular Carcinoma
Cited by: 4
Author(s): Wei Liu, Cuiqing Zhong, Deguan Lv, Mengjie Tang, Feng Xie
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-017-15629-6

Innate Cell-Mediated Cytotoxic Activity of European Sea Bass Leucocytes Against Nodavirus-Infected Cells: A Functional and RNA-seq Study
Cited by: 30
Author(s): Elena Chaves-Pozo, Yulema Valero, Anna Esteve‐Codina, Jèssica Gómez-Garrido, Marc Dabad, Tyler Alioto, José Meseguer, M. Ángeles Esteban, Alberto Cuesta
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-020-74602-y

A trophic latitudinal gradient revealed in anchovy and sardine from the Western Mediterranean Sea using a multi-proxy approach
Cited by: 21
Author(s): Eneko Bachiller, Marta Albo-Puigserver, Joan Giménez, María Grazia Pennino, Neus Marí‐Mena, Antonio Esteban, Elena Lloret-Lloret, Angélique Jadaud, Belén Carro, José María Bellido, Marta Coll
Software Mentions: 5
Published: almost 6 years ago

10.3389/fmicb.2021.653880

Interactions Between Tsetse Endosymbionts and Glossina pallidipes Salivary Gland Hypertrophy Virus in Glossina Hosts
Cited by: 4
Author(s): Güler Demirbaş-Uzel, Antonios A. Augustinos, Vangelis Doudoumis, Andrew G. Parker, George Tsiamis, Kostas Bourtzis, Adly M. M. Abd-Alla
Software Mentions: 5
Published: over 5 years ago

10.1016/j.cmet.2018.07.005

A Role for p53 in the Adaptation to Glutamine Starvation through the Expression of SLC1A3
Cited by: 144
Author(s): Mylène Tajan, A. Höck, Julianna Blagih, Neil Robertson, Christiaan F. Labuschagne, Flore Kruiswijk, Timothy J. Humpton, Peter D. Adams, Karen H. Vousden
Software Mentions: 5
Published: almost 8 years ago

10.3389/fmicb.2021.661410

Short-Term Effect in Soil Microbial Community of Two Strategies of Recovering Degraded Area in Brazilian Savanna: A Pilot Case Study
Cited by: 1
Author(s): Priscila Jane Romano Gonçalves Selari, Luiz Ricardo Olchanheski, Almir José Ferreira, Tiago do Prado Paim, Guido Calgaro, Flávio Lopes Claudio, Estênio Moreira Alves, Darliane de Castro Santos, Welington Luiz Araújo, Fabiano Guimarães Silva
Software Mentions: 5
Published: about 5 years ago

10.1523/JNEUROSCI.0827-19.2019

Mammillothalamic Disconnection Alters Hippocampocortical Oscillatory Activity and Microstructure: Implications for Diencephalic Amnesia
Cited by: 34
Author(s): Christopher M. Dillingham, Michal M. Milczarek, James C. Perry, Bethany E. Frost, Greg D. Parker, Yaniv Assaf, Frank Sengpiel, Shane M. O’Mara, Seralynne Denise Vann
Software Mentions: 5
Published: about 7 years ago

10.3389/fmicb.2021.703693

Identification of an Intestinal Microbiota Signature Associated With the Severity of Necrotic Enteritis
Cited by: 14
Author(s): Qing Yang, Jing Liu, Xiaofan Wang, Kelsy Robinson, Melanie A. Whitmore, Sydney Stewart, Jiangchao Zhao, Guolong Zhang
Software Mentions: 5
Published: about 5 years ago

10.2196/26494

Patient Monitoring Alarms of an Intensive Care Unit: Observational Study with DIY Instructions (Preprint)
Cited by: 13
Author(s): Akira-Sebastian Poncette, Maximilian Markus Wunderlich, Claudia Spies, Patrick Heeren, Gerald Vorderwülbecke, Eduardo Salgado, Marc Kastrup, Markus A. Feufel, Felix Balzer
Software Mentions: 5
Published: over 5 years ago

10.3389/fmicb.2019.01486

Soil Salinity and pH Drive Soil Bacterial Community Composition and Diversity Along a Lateritic Slope in the Avon River Critical Zone Observatory, Western Australia
Cited by: 39
Author(s): Flora Jane Mary O'Brien, Maya Almaraz, Melissa A. Foster, A. F. Hill, David P. Huber, Elizabeth King, Harry Langford, Mary-Anne Lowe, Bede S. Mickan, Valerie S. Miller, Oliver Moore, Falko Mathes, Deirdre Gleeson, Matthias Leopold
Software Mentions: 5
Published: about 7 years ago

10.3389/fgene.2020.595361

Identification of Hub Prognosis-Associated Oxidative Stress Genes in Pancreatic Cancer Using Integrated Bioinformatics Analysis
Cited by: 8
Author(s): Xin Qiu, Qin-Han Hou, Qiuyue Shi, Haixing Jiang, Shanyu Qin
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0080822

Bacterial Endosymbiosis in a Chordate Host: Long-Term Co-Evolution and Conservation of Secondary Metabolism
Cited by: 50
Author(s): Jason C. Kwan, Eric W. Schmidt
Software Mentions: 5
Published: over 12 years ago

10.3389/fmicb.2019.01665

Spatial Environmental Heterogeneity Determines Young Biofilm Assemblages on Microplastics in Baltic Sea Mesocosms
Cited by: 97
Author(s): Katharina Kesy, Sonja Oberbeckmann, Bernd Kreikemeyer, Matthias Labrenz
Software Mentions: 5
Published: about 7 years ago

10.3389/fmicb.2021.690251

Low Global Diversity of Candidatus Microthrix, a Troublesome Filamentous Organism in Full-Scale WWTPs
Cited by: 16
Author(s): Marta Nierychlo, Caitlin M. Singleton, Francesca Petriglieri, Lisette Thomsen, Jette Fischer Petersen, Miriam Peces, Zivile Kondrotaite, Morten Simonsen Dueholm, Per Halkjær Nielsen
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2020.00052

sraX: A Novel Comprehensive Resistome Analysis Tool
Cited by: 14
Author(s): Leonardo G. Panunzi
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-021-90489-9

Auxiliary rapid identification of pathogenic and antagonistic microorganisms associated with Coptis chinensis root rot by high-throughput sequencing
Cited by: 7
Author(s): Hailang Liao, Ling Huang, Na Li, Wenjia Ke, Yiqing Xiang, Yuntong Ma
Software Mentions: 5
Published: over 5 years ago

10.3389/fmicb.2021.662144

Whole Resistome Analysis in Campylobacter jejuni and C. coli Genomes Available in Public Repositories
Cited by: 16
Author(s): José F. Cobo‐Díaz, Paloma González Del Río, Avelino Álvarez‐Ordóñez
Software Mentions: 5
Published: about 5 years ago

10.3389/fgene.2020.602542

Integrated Analysis of lncRNA-Mediated ceRNA Network Reveals a Prognostic Signature for Hepatocellular Carcinoma
Cited by: 7
Author(s): Jian-Rong Sun, Chen-Fan Kong, Kunmin Xiao, Jia-Lu Yang, Xiang-Ke Qu, Jinghui Sun
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0156550

Faunal Communities Are Invariant to Fragmentation in Experimental Seagrass Landscapes
Cited by: 31
Author(s): Jonathan S. Lefcheck, Scott R. Marion, Alfonso V. Lombana, Robert J. Orth
Software Mentions: 5
Published: about 10 years ago

10.1093/jxb/eraa289

Measuring Rubisco activity: challenges and opportunities of NADH-linked microtiter plate-based and 14C-based assays
Cited by: 11
Author(s): Cristina Rodrigues Gabriel Sales, Anabela Bernardes da Silva, Elizabete Carmo‐Silva
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pone.0230284

Lake-depth related pattern of genetic and morphological diatom diversity in boreal Lake Bolshoe Toko, Eastern Siberia
Cited by: 15
Author(s): Kathleen R. Stoof‐Leichsenring, Katharina Dulias, Boris K. Biskaborn, Ludmila A Pestryakova, Ulrike Herzschuh
Software Mentions: 5
Published: over 6 years ago

10.3390/insects12030219

Ant Diversity and Community Composition in Alpine Tree Line Ecotones
Cited by: 4
Author(s): Elia Guariento, Konrad Fiedler
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.ppat.1004940

Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin
Cited by: 41
Author(s): Austin G. Meyer, Claus O. Wilke
Software Mentions: 5
Published: over 11 years ago

10.3389/fmicb.2019.02587

Complementary DNA/RNA-Based Profiling: Characterization of Corrosive Microbial Communities and Their Functional Profiles in an Oil Production Facility
Cited by: 15
Author(s): Silvia J. Salgar-Chaparro, Laura L. Machuca
Software Mentions: 5
Published: almost 7 years ago

10.3390/insects12010072

Comparison of New Kairomone-Based Lures for Cydia pomonella (Lepidoptera: Tortricidae) in Italy and USA
Cited by: 10
Author(s): Michele Preti, A. L. Knight, Riccardo Favaro, Esteban Basoalto, Marco Tasin, Sergio Angeli
Software Mentions: 5
Published: over 5 years ago

10.3390/jcm10173888

A Machine Learning Predictive Model for Post-Ureteroscopy Urosepsis Needing Intensive Care Unit Admission: A Case–Control YAU Endourology Study from Nine European Centres
Cited by: 16
Author(s): Amelia Pietropaolo, Robert Geraghty, Rajan Veeratterapillay, Alistair Rogers, Panagiotis Kallidonis, Luca Villa, Luca Boeri, Emanuele Montanari, Gökhan Atış, Esteban Emiliani, Tarık Emre Şener, Feras Al Jaafari, John Fitzpatrick, Matthew B.K. Shaw, Chris Harding, Bhaskar K. Somani
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2020.01943

Commonalities and Differences in the Transcriptional Response of the Model Fungus Saccharomyces cerevisiae to Different Commercial Graphene Oxide Materials
Cited by: 4
Author(s): Felix Laguna-Teno, María Suárez-Diez, Juan Antonio Tamayo-Ramos
Software Mentions: 5
Published: about 6 years ago

10.3389/fonc.2019.01083

LCTL Is a Prognostic Biomarker and Correlates With Stromal and Immune Infiltration in Gliomas
Cited by: 12
Author(s): Jun Su, Qianquan Ma, Wenyong Long, Hailin Tang, Changwu Wu, Mei Luo, Xiangyu Wang, Kai Xiao, Li Yang, Qian Xiao, Chi Zhang, Haoyu Li, Qing Liu
Software Mentions: 5
Published: almost 7 years ago

10.1016/j.isci.2021.103021

Salmonella enterica from a soldier from the 1652 siege of Barcelona (Spain) supports historical transatlantic epidemic contacts
Cited by: 2
Author(s): Toni de-Dios, Pablo Carrión, Ïñigo Olalde, Laia Llovera Nadal, Esther Lizano, Dídac Pàmies, Tomàs Marqués-Bonet, François Balloux, Lucy van Dorp, Carles Lalueza‐Fox
Software Mentions: 5
Published: almost 5 years ago

10.3390/insects11110811

Search for Alternative Control Strategies of Drosophila suzukii (Diptera: Drosophilidae): Laboratory Assays Using Volatile Natural Plant Compounds
Cited by: 7
Author(s): Astrid Eben, Frank Sporer, Heidrun Vogt, Bernhard Wetterauer, Michael Wink
Software Mentions: 5
Published: almost 6 years ago

10.3390/insects11110783

Colony-Level Effects of Amygdalin on Honeybees and Their Microbes
Cited by: 5
Author(s): James P. Tauber, Cansu Özge Tozkar, Ryan S. Schwarz, Dawn Lopez, Rebecca E. Irwin, Lynn S. Adler, Jay D. Evans
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-018-20823-1

Homogenization and impoverishment of taxonomic and functional diversity of ants in Eucalyptus plantations
Cited by: 65
Author(s): Felipe Martello, Francesco de Bello, Maria Santina de Castro Morini, Rogério Rosa da Silva, Débora Rodriges de Souza-Campana, Milton Cézar Ribeiro, Carlos P. Carmona
Software Mentions: 5
Published: over 8 years ago

10.3390/insects11090578

The Microbiome of Neotropical Water Striders and Its Potential Role in Codiversification
Cited by: 12
Author(s): Anakena M. Castillo, Kristin Saltonstall, Carlos F. Arias, Karina Chavarria, Luis A. Ramírez‐Camejo, Luis C. Mejía, Luis F. De León
Software Mentions: 5
Published: almost 6 years ago

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