Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2021.665858

https://doi.org/10.3389/fmicb.2021.665858

Multi-Omics Approach Reveals the Potential Core Vaccine Targets for the Emerging Foodborne Pathogen Campylobacter jejuni

Cited by: 6
Author(s): Hai‐Yan Cao, Hanxiao Xu, Ning Cai, Xiang Li, Ren Qiu-fang, Tiantian Zhang, Yusen Zhang, Rui Gao
Published: over 3 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: micropan
Microbial Pan-Genome Analysis
Papers that mentioned: 19
pypi: heatmap
Module to create heatmaps
Papers that mentioned: 285
pypi: pyani
pyani provides a package and script for calculation of genome-scale average nucleotide identity.
Papers that mentioned: 120