Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: ggfortify
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggfortify
Data Visualization Tools for Statistical Analysis Results
21 versions
Latest release: over 1 year ago
32 dependent packages
32,888 downloads last month
Papers Mentioning ggfortify 132
10.1371/journal.pone.0254136
Cytomegalovirus infection in malignant pleural mesotheliomaCited by: 2
Author(s): De Von Hunter-Schlichting, Karl T. Kelsey, Ryan T. Demmer, Manish R. Patel, Raphael Bueno, Brock C. Christensen, Naomi Fujioka, Deepa Kolarseri, Heather H. Nelson
Software Mentions: 3
Published: over 3 years ago
10.1038/s42003-021-02131-z
Linking genome size variation to population phenotypic variation within the rotifer, Brachionus asplanchnoidisCited by: 9
Author(s): Claus‐Peter Stelzer, Maria Pichler, Anita Hatheuer
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0221706
The potential of VKORC1 polymorphisms in Mustelidae for evolving anticoagulant resistance through selection along the food chainCited by: 2
Author(s): Matthias Stöck, Florian Reisch, Morten Elmeros, Doreen Gabriel, Werner Kloas, Eva Kreuz, Pia Lassen, Alexandra Esther
Software Mentions: 3
Published: about 5 years ago
10.3389/fpls.2018.00229
QTL-By-Environment Interaction in the Response of Maize Root and Shoot Traits to Different Water RegimesCited by: 29
Author(s): Pengcheng Li, Yingying Zhang, Yin Su, Pengfei Zhu, Ting Pan, Yongsheng Xu, Jieyu Wang, Dejun Hao, Huiying Fang, Chenwu Xu, Zefeng Yang
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-020-75990-x
Plasmopara viticola infection affects mineral elements allocation and distribution in Vitis vinifera leavesCited by: 17
Author(s): Stefano Cesco, Anna Tolotti, Stefano Nadalini, Stefano Rizzi, Fabio Valentinuzzi, Tanja Mimmo, Carlo Porfido, Ignazio Allegretta, O. Giovannini, Michele Perazzolli, G. Cipriáni, Roberto Terzano, I. Pertot, Youry Pii
Software Mentions: 2
Published: about 4 years ago
10.3897/BDJ.4.e10059
Dung beetle (Coleoptera: Scarabaeoidea) assemblages in the western Italian Alps: benchmark data for land use monitoringCited by: 2
Author(s): Claudia Tocco, Martin H. Villet
Software Mentions: 2
Published: almost 8 years ago
10.3389/fimmu.2021.713697
CD38 Deficiency Ameliorates Chronic Graft-Versus-Host Disease Murine Lupus via a B-Cell-Dependent MechanismCited by: 1
Author(s): África Martínez-Blanco, Marilú Domínguez-Pantoja, Maria Botía-Sánchez, Sonia Pérez-Cabrera, Nerea Bello-Iglesias, Paula Carrillo-Rodríguez, Natividad Martín‐Morales, Antonio Lario-Simón, María M. Pérez-Sánchez-Cañete, Laura Montosa-Hidalgo, Salvador Guerrero-Fernández, Victoria M. Longobardo-Polanco, Sandra Redondo‐Sánchez, Alberto Cornet-Gómez, María Torres-Sáez, Ana Fernández-Ibáñez, Laura Carmen Terrón-Camero, Eduardo Andrés-León, Francisco O’Valle, Ramón Merino, Mercedes Zubiaur, Jaime Sancho
Software Mentions: 2
Published: about 3 years ago
10.2807/1560-7917.ES.2021.26.13.2001782
Prior infection by seasonal coronaviruses, as assessed by serology, does not prevent SARS-CoV-2 infection and disease in children, France, April to June 2020Cited by: 28
Author(s): Isabelle Sermet‐Gaudelus, Sarah Temmam, Christéle Huon, Sylvie Behillil, Vincent Gajdos, Thomas Bigot, Thibaut Lurier, Delphine Chrétien, Marija Backović, Agnès Delaunay‐Moisan, Flora Donati, Mélanie Albert, Elsa Foucaud, Bettina Mesplées, G. Benoist, Albert Faye, Marc Duval-Arnould, Célia Crétolle, Marina Charbit, Mélodie Aubart, Johanne Auriau, Mathie Lorrot, Dulanjalee Kariyawasam, L. Fertitta, Gilles Orliaguet, Bénédicte Pigneur, Brigitte Bader‐Meunier, C. Briand, Vincent Enouf, Julie Toubiana, Tiffany Guilleminot, Sylvie van der Werf, Marianne Leruez‐Ville, Marc Éloit
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms19072079
The Transcriptomic Landscape of Gastric Cancer: Insights into Epstein-Barr Virus Infected and Microsatellite Unstable TumorsCited by: 24
Author(s): Irene Gullo, Joana Carvalho, Diana Martins, Diana Lemos, Ana Rita Monteiro, Marta Ferreira, Kakoli Das, Patrick Tan, Carla Oliveíra, Fátima Carneiro, Patrícia Oliveira
Software Mentions: 2
Published: over 6 years ago
10.1002/ajb2.1676
Resolving species boundaries in a recent radiation with the Angiosperms353 probe set: the <i>Lomatium packardiae/L. anomalum</i> clade of the <i>L. triternatum</i> (Apiaceae) complexCited by: 10
Author(s): Michael V. Ottenlips, Donald H. Mansfield, Sven Buerki, Mary Ann Feist, Stephen R. Downie, Steven Dodsworth, Félix Forest, Gregory M. Plunkett, James F. Smith
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-018-23655-1
Integrated transcriptomes throughout swine oestrous cycle reveal dynamic changes in reproductive tissues interacting networksCited by: 24
Author(s): Junmo Kim, Jong-Eun Park, Inkyu Yoo, Jisoo Han, Namshin Kim, Won-Jun Lim, Eun Seok Cho, Bong-Hwan Choi, Suna Choi, Tae-Hun Kim, M.F.W. te Pas, Hakhyun Ka, Kyung-Tai Lee
Software Mentions: 2
Published: over 6 years ago
10.12688/f1000research.6055.3
A double blinded, placebo-controlled pilot study to examine reduction of CD34+/CD117+/CD133+ lymphoma progenitor cells and duration of remission induced by neoadjuvant valspodar in dogs with large B-cell lymphomaCited by: 0
Author(s): Daisuke Ito, Michael O. Childress, Nicola J. Mason, Amber Winter, Timothy O’Brien, Michael Henson, Antonella Borgatti, Mitzi Lewellen, Erika Krick, Janet Stewart, Sarah Lahrman, Bartek Rajwa, Milcah C. Scott, Davis Seelig, Joseph S. Koopmeiners, Stephan Ruetz, Jaime F. Modiano
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-020-66704-4
Acyl homoserine lactone-mediated quorum sensing in the oral cavity: a paradigm revisitedCited by: 25
Author(s): Andrea Muras, Paz Otero-Casal, Vanessa Blanc, Ana Otero
Software Mentions: 2
Published: over 4 years ago
10.3390/molecules26092825
Quality Evaluation of Light- and Dark-Colored Hungarian Honeys, Focusing on Botanical Origin, Antioxidant Capacity and Mineral ContentCited by: 19
Author(s): Alexandra Bodó, Lilla Radványi, Tamás Kőszegi, Rita Csepregi, Dávid U. Nagy, Ágnes Farkas, Marianna Kocsis
Software Mentions: 2
Published: over 3 years ago
10.3389/fpls.2020.596000
Nutraceutical Profiles of Two Hydroponically Grown Sweet Basil Cultivars as Affected by the Composition of the Nutrient Solution and the Inoculation With Azospirillum brasilenseCited by: 16
Author(s): Šimun Kolega, Begoña Miras-Moreno, Valentina Buffagni, Luigi Lucini, Fabio Valentinuzzi, Mauro Maver, Tanja Mimmo, Marco Trevisan, Youry Pii, Stefano Cesco
Software Mentions: 2
Published: about 4 years ago
10.3389/fonc.2019.00788
Identification of Eight Small Nucleolar RNAs as Survival Biomarkers and Their Clinical Significance in Gastric CancerCited by: 14
Author(s): Xu ning Wang, Maolin Xu, Yaohua Yan, Yanshen Kuang, Li P, Wei Zheng, Hongyi Liu, Baoqing Jia
Software Mentions: 2
Published: about 5 years ago
10.3897/phytokeys.176.63378
Notes on Allium section Rhizirideum (Amaryllidaceae) in South Korea and northeastern China: with a new species from Ulleungdo IslandCited by: 7
Author(s): Ju Eun Jang, Jong-Soo Park, Ji-Young Jung, Dong-Kap Kim, Sungyu Yang, Hyeok Jae Choi
Software Mentions: 2
Published: over 3 years ago
10.3390/plants9060694
Transcriptome Comparison of Defense Responses in the Rice Variety ‘Jao Hom Nin’ Regarding Two Blast Resistant Genes, Pish and PikCited by: 4
Author(s): Athipat Ngernmuen, Worrawit Suktrakul, Sureeporn Kate-Ngam, Chatchawan Jantasuriyarat
Software Mentions: 2
Published: over 4 years ago
10.1002/ece3.5688
Wildfire‐induced short‐term changes in a small mammal community increase prevalence of a zoonotic pathogen?Cited by: 10
Author(s): Frauke Ecke, Seyed Alireza Nematollahi Mahani, Magnus Evander, Birger Hörnfeldt, Hussein Khalil
Software Mentions: 2
Published: about 5 years ago
10.1186/s12870-020-02806-5
Comparative proteomic analysis reveals that the Heterosis of two maize hybrids is related to enhancement of stress response and photosynthesis respectivelyCited by: 11
Author(s): Daoping Wang, Yongying Mu, Hu Xiu, Bo Ma, Zhen Wang, Li Zhu, Jianlong Xu, Changling Huang, Yinghong Pan
Software Mentions: 2
Published: almost 4 years ago
10.3390/ijms20246339
Metabolomic Profile of Oviductal Extracellular Vesicles across the Estrous Cycle in CattleCited by: 28
Author(s): Julie Gatien, Pascal Mermillod, Guillaume Tsikis, Ophélie Bernardi, Sarah Janati Idrissi, Rustem Uzbekov, Daniel Le Bourhis, Pascal Salvetti, Carmen Almiñana, Marie Saint‐Dizier
Software Mentions: 2
Published: almost 5 years ago
10.18632/aging.101927
HPV shapes tumor transcriptome by globally modifying the pool of RNA binding protein-binding motifCited by: 13
Author(s): Yingcheng Wu, Hao Chen, Yuyan Chen, Lei Qu, Erhao Zhang, Zhou Wang, Yuanyuan Wu, Riyun Yang, Renfang Mao, Cuihua Lu, Yihui Fan
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-020-78914-x
Influences of drying temperature and storage conditions for preserving the quality of maize postharvest on laboratory and field scalesCited by: 29
Author(s): Paulo Carteri Coradi, Vanessa Maldaner, Éverton Lutz, Paulo Vinícius da Silva Daí, Paulo Eduardo Teodoro
Software Mentions: 1
Published: almost 4 years ago
10.3389/fmicb.2018.01360
Defining the Species Micromonospora saelicesensis and Micromonospora noduli Under the Framework of GenomicsCited by: 20
Author(s): Raúl Riesco, Lorena Carro, Brenda Román‐Ponce, Carlos Prieto, Jochen Blom, Hans‐Peter Klenk, Philippe Normand, Martha E. Trujillo
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-021-89279-0
DNA methylation landscape of 16 canine somatic tissues by methylation-sensitive restriction enzyme-based next generation sequencingCited by: 4
Author(s): Jumpei Yamazaki, Yuki Matsumoto, Jaroslav Jelı́nek, Teita Ishizaki, Shingo Maeda, Kei Watanabe, Genki Ishihara, Junya Yamagishi, Mitsuyoshi Takiguchi
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0241787
Adaptation of technological packaging for conservation of soybean seeds in storage units as an alternative to modified atmospheresCited by: 11
Author(s): Paulo Carteri Coradi, Claudir Lari Padia, Lanes Beatriz Acosta Jaques, Guilherme Abreu Coelho de Souza, Roney Eloy Lima, Amanda Müller, Paulo Eduardo Teodoro, Jonatas Ibagé Steinhaus, Letícia de Oliveira Carneiro
Software Mentions: 1
Published: about 4 years ago
10.3390/ijms20194910
Comparative Genome Analyses Reveal the Genomic Traits and Host Plant Adaptations of Flavobacterium akiainvivens IK-1TCited by: 0
Author(s): Xuehua Wan
Software Mentions: 1
Published: about 5 years ago
10.1186/s42523-020-00025-9
Metagenomic analysis suggests broad metabolic potential in extracellular symbionts of the bivalve Thyasira cf. gouldiCited by: 3
Author(s): Bonita McCuaig, Lourdes Peña‐Castillo, Suzanne C. Dufour
Software Mentions: 1
Published: over 4 years ago
10.3389/fmicb.2019.00309
Whole Genome Sequencing of Mycobacterium tuberculosis Clinical Isolates From India Reveals Genetic Heterogeneity and Region-Specific Variations That Might Affect Drug SusceptibilityCited by: 36
Author(s): Jayshree Advani, Renu Verma, Oishi Chatterjee, Praveen K. Pachouri, Prashant Upadhyay, R. K. Brojen Singh, Jitendra Singh Yadav, Farah Naaz, Raju Ravikumar, Shashidhar Buggi, Mrutyunjay Suar, Umesh Gupta, Akhilesh Pandey, D. S. Chauhan, Srikanth Tripathy, Harsha Gowda, T. S. Keshava Prasad
Software Mentions: 1
Published: over 5 years ago
10.1038/srep32643
Secreted primary human malignant mesothelioma exosome signature reflects oncogenic cargoCited by: 85
Author(s): David W. Greening, Hong Ji, Maoshan Chen, Bruce Robinson, Ian M. Dick, Jenette Creaney, Richard J. Simpson
Software Mentions: 1
Published: about 8 years ago
10.1111/cns.13214
Metabolomics analysis reveals perturbations of cerebrocortical metabolic pathways in the Pah enu2 mouse model of phenylketonuriaCited by: 2
Author(s): Ling Lu, Zheng-Xiang Xia, Jialin Guo, Lizu Xiao, Yongjun Zhang
Software Mentions: 1
Published: about 5 years ago