cran: fitdistrplus | Projects | Ecosyste.ms: Papers

10.1371/journal.pcbi.1006242

Phylogeny-corrected identification of microbial gene families relevant to human gut colonization
Cited by: 29
Author(s): Patrick H. Bradley, Stephen Nayfach, Katherine S. Pollard
Software Mentions: 27
Published: over 6 years ago

10.3390/ijms21228837

Machine Learning Identifies Robust Matrisome Markers and Regulatory Mechanisms in Cancer
Cited by: 6
Author(s): Anni Kääriäinen, Vilma Pesola, Annalena Dittmann, Juho A. J. Kontio, Jarkko Koivunen, Taina Pihlajaniemi, Valerio Izzi
Software Mentions: 18
Published: about 4 years ago

10.1038/s41598-021-87843-2

Bodily ownership and agency sensations in a natural state
Cited by: 1
Author(s): Souta Hidaka, Kyoshiro Sasaki, Toshikazu Kawagoe, Nobuyuki Asai, Wataru Teramoto
Software Mentions: 15
Published: over 3 years ago

10.1038/srep30325

In silico synchronization reveals regulators of nuclear ruptures in lamin A/C deficient model cells
Cited by: 72
Author(s): Joke Robijns, Freya Molenberghs, Tom Sieprath, Tobias Corne, Marlies Verschuuren, Winnok H. De Vos
Software Mentions: 14
Published: over 8 years ago

10.1186/s13059-017-1305-0

Splatter: simulation of single-cell RNA sequencing data
Cited by: 575
Author(s): Luke Zappia, Belinda Phipson, Alicia Oshlack
Software Mentions: 13
Published: over 7 years ago

10.3389/fvets.2019.00406

An Epidemiological and Economic Simulation Model to Evaluate Strategies for the Control of Bovine Virus Diarrhea in Germany
Cited by: 17
Author(s): Jörn Gethmann, Carolina Probst, Jason Bassett, Pascal Blunk, Philipp Hövel, Franz Josef Conraths
Software Mentions: 13
Published: about 5 years ago

10.1371/journal.pgen.1006111

Genetic Drift, Purifying Selection and Vector Genotype Shape Dengue Virus Intra-host Genetic Diversity in Mosquitoes
Cited by: 109
Author(s): Sébastian Lequime, Albin Fontaine, Meriadeg Ar Gouilh, Isabelle Moltini-Conclois, Louis Lambrechts
Software Mentions: 12
Published: over 8 years ago

10.3390/nu13082639

Infants’ First Solid Foods: Impact on Gut Microbiota Development in Two Intercontinental Cohorts
Cited by: 18
Author(s): Chiara-Maria Homann, Connor A J Rossel, Sara Dizzell, Liene Bervoets, Julia Simioni, Jenifer Li, Elizabeth Gunn, Michael G. Surette, Russell J. de Souza, Monique Mommers, Eileen K. Hutton, Katherine M. Morrison, John Penders, Niels van Best, Jennifer C. Stearns
Software Mentions: 12
Published: over 3 years ago

10.1186/s40425-019-0764-0

34th Annual Meeting & Pre-Conference Programs of the Society for Immunotherapy of Cancer (SITC 2019): part 2
Cited by: 28
Author(s):
Software Mentions: 12
Published: about 5 years ago

10.1371/journal.pcbi.1007665

CAncer bioMarker Prediction Pipeline (CAMPP)—A standardized framework for the analysis of quantitative biological data
Cited by: 8
Author(s): Thilde Terkelsen, Anders Krogh, Elena Papaleo
Software Mentions: 11
Published: almost 5 years ago

10.1038/srep43932

Implications of the cattle trade network in Cameroon for regional disease prevention and control
Cited by: 60
Author(s): Paolo Carlo Motta, Thibaud Porphyre, Ian Handel, Saidou M. Hamman, Victor Ngu Ngwa, Vincent N. Tanya, K. L. Morgan, Rob Christley, Barend M. deC. Bronsvoort
Software Mentions: 10
Published: almost 8 years ago

10.1186/s13059-021-02286-2

Giotto: a toolbox for integrative analysis and visualization of spatial expression data
Cited by: 290
Author(s): Ruben Dries, Qi Zhu, Rui Dong, Chee-Huat Linus Eng, Huipeng Li, Kan Liu, Yuntian Fu, Tianxiao Zhao, Arpan Sarkar, Feng Bao, Rani E. George, Nico Pierson, Long Cai, Guo‐Cheng Yuan
Software Mentions: 9
Published: almost 4 years ago

10.3390/ijms22116160

Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis
Cited by: 10
Author(s): Federico Martinez‐Seidel, Olga Beine-Golovchuk, Yin-Chen Hsieh, Kheloud El Eshraky, Michał Górka, Bo-Eng Cheong, Erika Vanessa Jiménez-Posada, Dirk Walther, Aleksandra Skirycz, Ute Roessner, Joachim Kopka, Alexandre Augusto Pereira Firmino
Software Mentions: 9
Published: over 3 years ago

10.1177/1179546820951793

Carotid Plaque Morphology is Similar in Patients with Reduced and Normal Renal Function
Cited by: 1
Author(s): Caroline Heijl, Fredrik Kahn, Andreas Edsfeldt, Christoffer Tengryd, Jan Nilsson, Isabel Gonçalves
Software Mentions: 9
Published: almost 5 years ago

10.3389/fimmu.2019.00413

Transcriptional Profiles of California Sea Lion Peripheral NK and CD+8 T Cells Reflect Ecological Regionalization and Infection by Oncogenic Viruses
Cited by: 4
Author(s): Ignacio Peñín, Mónica Eugenia Figueroa-Cabañas, Fabiola Guerrero-de la Rosa, Luis A. Soto-García, Roberto Álvarez-Martínez, Adriana Flores-Morán, Karina Acevedo‐Whitehouse
Software Mentions: 9
Published: almost 6 years ago

10.1098/rsos.200100

Diet composition and social environment determine food consumption, phenotype and fecundity in an omnivorous insect
Cited by: 20
Author(s): Yeisson Gutiérrez, Marion Fresch, David Ott, Jens Brockmeyer, Christoph Scherber
Software Mentions: 9
Published: over 4 years ago

10.1371/journal.pone.0243070

Temporal changes in bird communities in areas with different histories of fire disturbance in highland grasslands of Brazil
Cited by: 3
Author(s): Eduardo Chiarani, Maurício Bettio, Carla Suertegaray Fontana
Software Mentions: 9
Published: about 4 years ago

10.1186/s12936-020-3133-z

Influence of house characteristics on mosquito distribution and malaria transmission in the city of Yaoundé, Cameroon
Cited by: 10
Author(s): Carmène Sandra Ngadjeu, Patricia Doumbe-Belisse, Abdou Talipouo, Landre Djamouko-Djonkam, Parfait Awono-Ambene, Sévilor Kekeunou, Wilson Toussile, Charles S. Wondji, Christophe Antonio-Nkondjio
Software Mentions: 9
Published: almost 5 years ago

10.1371/journal.pone.0215310

Local and regional drivers of ant communities in forest-grassland ecotones in South Brazil: A taxonomic and phylogenetic approach
Cited by: 16
Author(s): William Dröse, Luciana Regina Podgaiski, Camila Fagundes Dias, Milton de Souza Mendonça
Software Mentions: 9
Published: over 5 years ago

10.1093/cid/ciz060

Global Review of the Age Distribution of Rotavirus Disease in Children Aged <5 Years Before the Introduction of Rotavirus Vaccination
Cited by: 35
Author(s): Mateusz Hasso-Agopsowicz, Chandresh N Ladva, Benjamin A. Lopman, Colin Sanderson, Adam L. Cohen, Jacqueline E. Tate, Ximena Riveros, Ana María Henao-Restrepo, Andrew Clark, Míriam Alkorta, Christina Atchison, Salem Banajeh, Sylvia Becker‐Dreps, Mohammed Benhafid, Nita Bhandari, Ladaporn Bodhidatta, Tessa Braeckman, Josephine Bwogi, Rita de Cássia Compagnoli Carmona, Gustavo Cilla, Ingrid L. Contreras-Roldan, Barbara S. Coulson, Nigel A. Cunliffe, Ron Dagan, N. Givon, Juan Ignacio Degiuseppe, Shaveta Dhiman, Zhang Dian, Jenna Diaz, Shubha Ranjan Dutta, Triveni Krishnan, Byomkesh Manna, Stephanie Fletcher-Lartey, Chuanxi Fu, D. Gendrel, Khalifa Sifaw Ghenghesh, G. Gonzalez Mago, Simona De Grazia, Keith Grimwood, Michelle Groome, Md. Ahshanul Haque, Ulrich Heininger, Eric R. Houpt, Miren Iturriza‐Gómara, Daniel Hungerford, Claudia Jarquín, John P. McCracken, I. L. Contreras, Celia Cordón-Rosales, Petra Kaiser-Labusch, Gagandeep Kang, Sumit Kar, Nicholas M. Kiulia, Karen L. Kotloff, Renat Latipov, Alexandre da Costa Linhares, Mathie Lorrot, Marcelo Gastón Mandile, Christine Mast, M. A. Mathew, F. Matinon-Torres, Jelle Matthijnssens, Z. Mladenova, Marina Monini, Milagrosa Montes, Ainara Arana, Mohammad Motamedifar, Akram Najafi, Tell Nelson, James Nokes, Francine Ntoumi, Kei Numazaki, Ciara E. O’Reilly, Theresa J. Ochoa, Nicola Page, Anne‐Laure Page, Céline Langendorf, Alexander T. Podkolzin, Caroline Quach, Maria Lúcia Rácz, Alexis de Rougemont, Guillermo M. Ruíz-Palacios, Samir K. Saha, Samir K. Saha, Syed Moinuddin Satter, L. Soares, Subijanto Marto Sudarmo, Katsumi Shigemura, Toshihiko Shirakawa, Alpha Fardah Athiyyah, Beckie Nnenna Tagbo, Phillip I. Tarr, Eileen J. Klein, Donna M. Denno, Ann Turner, Ezeonwu Bertilla Uzoma, R. R. Vatosoa, Ernest Apondi Wandera, Mary E. Wikswo, Daniel C. Payne, Huang Yhu-Chering, Tetsushi Yoshikawa, Ken Sugata, Qianqian Yuan, Liang LiYing, Khalequ Zaman, Xiaofang Zhou, S. X. Zhang, Wei Xu, Fatima Serhan, Tomoka Nakamura, Sébastien Antoni, Mary Agócs, Jillian Murray, Thomas Cherian, Jason M. Mwenda, Goitom Weldegebriel, Joseph Nsiari-Muzeyi Biey, Dah Cheikh, Nadia Teleb, Hossam Abdel Rahman, Hinda Ahmed, Danni Daniels, Dovile Videbaek, Annemarie Wasley, Simarjit Singh, Lúcia de Oliveira, Gloria Rey-Benito, N. Jennifer Sanwogou, Jayantha Liyanage, Pushpa Ranjan Wijesinghe, Batmunkh Nyambat, Varja Grabovac, Kimberley Fox, Fem Julia Paladin, Nicholas Henschke
Software Mentions: 8
Published: almost 6 years ago

10.3389/fimmu.2017.00690

Changes in Host Immune–Endocrine Relationships during Tuberculosis Treatment in Patients with Cured and Failed Treatment Outcomes
Cited by: 7
Author(s): Léanie Kleynhans, Sheena Ruzive, Lizaan Ehlers, Lani Thiart, Novel N. Chegou, Magda Conradie, Magdalena Kriel, Kim Stanley, Gian D. van der Spuy, Martin Kidd, Paul D. van Helden, Gerhard Walzl, Katharina Ronacher
Software Mentions: 8
Published: over 7 years ago

10.1016/j.mex.2019.05.021

Inaccessible rocky cliffs: An optimized method for plant data collection in extreme environments
Cited by: 0
Author(s): Estrella Alfaro-Saíz, Víctor Granda, Alfonso Insuasty Rodríguez, Raquel Alonso Redondo, M. García-González
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0244637

metaVaR: Introducing metavariant species models for reference-free metagenomic-based population genomics
Cited by: 5
Author(s): Romuald Laso-Jadart, Christophe Ambroise, Pierre Peterlongo, Mohammed‐Amin Madoui
Software Mentions: 7
Published: almost 4 years ago

10.1186/s12870-019-1791-1

Size matters: three methods for estimating nuclear size in mycorrhizal roots of Medicago truncatula by image analysis
Cited by: 9
Author(s): Gennaro Carotenuto, Ivan Arcangelo Sciascia, Ludovica Oddi, Veronica Volpe, Andrea Genre
Software Mentions: 7
Published: over 5 years ago

10.1186/1471-2334-14-539

The distribution of incubation and relapse times in experimental human infections with the malaria parasite Plasmodium vivax
Cited by: 12
Author(s): Andrew A. Lover, Xiahong Zhao, Gengfeng Zheng, Richard Coker, Alex R. Cook
Software Mentions: 7
Published: about 10 years ago

10.1186/s12864-018-4673-2

Ginkgo biloba’s footprint of dynamic Pleistocene history dates back only 390,000 years ago
Cited by: 29
Author(s): Nora Hohmann, Eva M. Wolf, Philippe Rigault, Wenbin Zhou, Markus Kiefer, Yunpeng Zhao, Chengxin Fu, Marcus A. Koch
Software Mentions: 7
Published: over 6 years ago

10.1093/conphys/coab033

Using hair cortisol analysis to understand the biological factors that affect black-footed ferret (Mustela nigripes) stress physiology
Cited by: 0
Author(s): Rachel M. Santymire, Nida Ali, Paul Marinari, Travis M. Livieri
Software Mentions: 6
Published: almost 4 years ago

10.3389/fmicb.2018.01892

Identification of Halophilic Microbes in Lung Fibrotic Tissue by Oligotyping
Cited by: 11
Author(s): Corina N. D’Alessandro-Gabazza, Celia Méndez–García, Osamu Hataji, Sara Westergaard, Fumiaki Watanabe, Taro Yasuma, Masaaki Toda, Hajime Fujimoto, Kota Nishihama, Kentaro Fujiwara, Osamu Taguchi, Tetsu Kobayashi, Roderick I. Mackie, Isaac Cann, Esteban C. Gabazza
Software Mentions: 6
Published: over 6 years ago

10.1001/jamanetworkopen.2021.8075

Assessment of Overuse of Medical Tests and Treatments at US Hospitals Using Medicare Claims
Cited by: 21
Author(s): Kelsey Chalmers, Philip E. Smith, Judith A. Garber, Valérie Gopinath, Shannon Brownlee, Allen D. Schwartz, Adam G Elshaug, Vikas Saini
Software Mentions: 6
Published: over 3 years ago

10.1155/2018/8354350

Systematic Analysis of RNA Regulatory Network in Rat Brain after Ischemic Stroke
Cited by: 11
Author(s): Liu Juan, Kunshan Zhang, Bin Hu, Siguang Li, Qing Li, Yuan Luo, Yang Wang, Zhifeng Deng
Software Mentions: 6
Published: almost 7 years ago

10.1093/ije/dyz028

Update on the global epidemiology of intussusception: a systematic review of incidence rates, age distributions and case-fatality ratios among children aged <5 years, before the introduction of rotavirus vaccination
Cited by: 36
Author(s): Andrew Clark, Mateusz Hasso-Agopsowicz, Matthew W Kraus, Lisa Stockdale, Colin Sanderson, Umesh D. Parashar, Jacqueline E. Tate
Software Mentions: 6
Published: almost 6 years ago

10.1371/journal.pone.0242959

Primed to vocalize: Wild-derived male house mice increase vocalization rate and diversity after a previous encounter with a female
Cited by: 10
Author(s): Sarah M. Zala, Doris Nicolakis, Maria Adelaide Marconi, A. Michael Noll, T. Ruf, Péter Balázs, Dustin J. Penn
Software Mentions: 6
Published: about 4 years ago

10.15252/msb.20199195

Improved detection of differentially represented DNA barcodes for high‐throughput clonal phenomics
Cited by: 12
Author(s): Yevhen Akimov, Daria Bulanova, Sanna Timonen, Krister Wennerberg, Tero Aittokallio
Software Mentions: 6
Published: almost 5 years ago

10.1093/cid/ciaa1130

The First 100 Days of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Control in Vietnam
Cited by: 49
Author(s): Phạm Quang Thái, Maia A. Rabaa, Duong Huy Luong, Dang Quang Tan, Tran Dai Quang, Ha-Linh Quach, Ngoc-Anh Hoang, Phung Cong Dinh, Ngu Duy Nghia, Trần Anh Tú, La Ngoc Quang, Tran My Phuc, Vinh Q. Chau, Nguyễn Công Khanh, Đặng Đức Anh, Trần Như Dương, Guy Thwaites, H. Rogier van Doorn, Marc Choisy, Mary Chambers, Marc Choisy, Jeremy Day, Dong Huu Khanh Trinh, Dong Thi Hoai Tam, Joseph Donovan, Du Hong Duc, Ronald B. Geskus, Ho Quang Chanh, Hien Ho Van, Huong Dang Thao, Huynh Le Anh Huy, Huynh Ngan Ha, Huynh Trung Trieu, H Yen, Evelyne Kestelyn, Thomas Kesteman, Lam Anh Nguyet, Lam Minh Yen, Katrina Lawson, Le Kim Thanh, Le Nguyen Truc Nhu, Le Thanh Hoang Nhat, Le Thi Hoang Lan, Tan Le Van, Sonia Lewycka, Nguyen Bao Tran, Nguyen Minh Nguyet, Nguyen Than Ha Quyen, Nguyen Thanh Ngoc, Nguyen Thi Han Ny, Nguyễn Thị Thương, Nguyễn Thị Huyền Trang, Nguyen Thi Kim Tuyen, Nguyen Thi Ngọc Diep, Nguyen Thi Dung, Nguyễn Thị Thanh Tâm, Nguyen Thi Thu Hong, Nguyễn Thu Trang, Vinh Chau Nguyen Van, Nguyen Xuan Truong, Ninh Thi Thanh Van, Phan Nguyen Quoc Khanh, Phung Khanh Lam, Phung Le Kim Yen, Phung Tran Huy Nhat, Maia A. Rabaa, Thuong Nguyen Thuy Thuong, Guy Thwaites, Louise Thwaites, Tran My Phuc, Tran Tan Thanh, Trần Thị Bích Ngọc, Tran Tinh Hien, Doorn H Rogier van, Nuil Jennifer van, Vinh Q. Chau, Vu Thi Bich, Vu Thi Ty Hang, Sophie Yacoub
Software Mentions: 6
Published: over 4 years ago

10.1002/ece3.7880

Do predators have a role to play in wetland ecosystem functioning? An experimental study in New England salt marshes
Cited by: 3
Author(s): Alexandria C. Moore, Oswald J. Schmitz
Software Mentions: 6
Published: over 3 years ago

10.1007/s11031-018-9684-4

Individual differences in emotion regulation moderate the associations between empathy and affective distress
Cited by: 42
Author(s): Philip A. Powell
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-017-14650-z

Cross platform analysis of transcriptomic data identifies ageing has distinct and opposite effects on tendon in males and females
Cited by: 18
Author(s): Louise Pease, Peter Clegg, Carole J. Proctor, Daryl P. Shanley, Simon Cockell, Mandy J. Peffers
Software Mentions: 5
Published: about 7 years ago

10.1098/rspb.2019.0738

Transient local adaptation and source–sink dynamics in experimental populations experiencing spatially heterogeneous environments
Cited by: 14
Author(s): Karen Bisschop, Frederik Mortier, Rampal S. Etienne, Dries Bonte
Software Mentions: 5
Published: over 5 years ago

10.3389/fmicb.2018.00973

A Novel Strategy for Detecting Recent Horizontal Gene Transfer and Its Application to Rhizobium Strains
Cited by: 15
Author(s): Xiangchen Li, Wenjun Tong, Lina Wang, Siddiq Ur Rahman, Gehong Wei, Shiheng Tao
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0197170

Context-dependent consumer control in New England tidal wetlands
Cited by: 3
Author(s): Alexandria C. Moore
Software Mentions: 4
Published: over 6 years ago

10.7717/peerj.6985

Simphony: simulating large-scale, rhythmic data
Cited by: 7
Author(s): Jordan M. Singer, Darwin Y. Fu, Jacob J. Hughey
Software Mentions: 4
Published: over 5 years ago

10.3390/s21186063

Analyzing Particularities of Sensor Datasets for Supporting Data Understanding and Preparation
Cited by: 1
Author(s): Francisco Javier Nieto, Unai Aguilera, Diego López-de-Ipiña
Software Mentions: 4
Published: over 3 years ago

10.1111/gcb.14644

A critical review of the impacts of cover crops on nitrogen leaching, net greenhouse gas balance and crop productivity
Cited by: 296
Author(s): Mohamed Abdalla, Astley Hastings, Kun Cheng, Qian Ye, D. R. Chadwick, Mikk Espenberg, Jaak Truu, Robert M. Rees, Pete Smith
Software Mentions: 4
Published: over 5 years ago

10.3389/fvets.2021.703473

Economic Considerations for Advancement Through the Progressive Control Pathway: Cost–Benefit Analysis of an FMD Disease-Free Zone in Punjab Province, Pakistan
Cited by: 1
Author(s): Nicholas A. Lyons, M. Afzal, Farrukh Toirov, A. Irshad, C.J.M. Bartels, Jonathan Rushton
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2017.01756

Bacterial, Archaeal, and Eukaryotic Diversity across Distinct Microhabitats in an Acid Mine Drainage
Cited by: 78
Author(s): Victoria Mesa, José Luis Gallego, Ricardo González-Gil, Béatrice Lauga, Jesús Sánchez, Celia Méndez–García
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-020-60071-w

Bluephage, a method for efficient detection of somatic coliphages in one hundred milliliter water samples
Cited by: 8
Author(s): J. Méndez, Daniel Toribio-Avedillo, Raquel Mangas-Casas, Judit Martínez-González
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12859-019-2637-4

CERENKOV2: improved detection of functional noncoding SNPs using data-space geometric features
Cited by: 4
Author(s): Yao Yao, Zheng Liu, Qi Wei, Stephen A. Ramsey
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-019-55632-7

Error associated with estimates of Minimum Infection Rate for Endemic West Nile Virus in areas of low mosquito trap density
Cited by: 9
Author(s): Sulagna Chakraborty, Rebecca L. Smith
Software Mentions: 4
Published: about 5 years ago

10.1111/pce.13707

Foliar herbivory by caterpillars and aphids differentially affects phytohormonal signalling in roots and plant defence to a root herbivore
Cited by: 26
Author(s): Peter N. Karssemeijer, Michael Reichelt, Jonathan Gershenzon, Joop J. A. van Loon, Marcel Dicke
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pcbi.1009058

A network modelling approach to assess non-pharmaceutical disease controls in a worker population: An application to SARS-CoV-2
Cited by: 9
Author(s): Edward M. Hill, Benjamin D. Atkins, Matthew James Keeling, Louise Dyson, Michael J. Tildesley
Software Mentions: 3
Published: over 3 years ago

10.3390/ijms22020871

Diverse Evolution in 111 Plant Genomes Reveals Purifying and Dosage Balancing Selection Models for F-Box Genes
Cited by: 6
Author(s): Zhihua Hua
Software Mentions: 3
Published: almost 4 years ago

10.3389/fpls.2020.601700

Changing How Biologists View Flowers—Color as a Perception Not a Trait
Cited by: 16
Author(s): Jair E. Garcia, Ryan D. Phillips, Craig I. Peter, Adrian G. Dyer
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.ppat.1009838

Probing the spatiotemporal patterns of HBV multiplication reveals novel features of its subcellular processes
Cited by: 10
Author(s): Lei Yue, Chang Li, Mingzhu Xu, Min Wu, Jiahui Ding, Jiangxia Liu, Xiaonan Zhang, Zhenghong Yuan
Software Mentions: 3
Published: over 3 years ago

10.1002/evl3.8

Direct estimation of the spontaneous mutation rate by short-term mutation accumulation lines in Chironomus riparius
Cited by: 54
Author(s): Ann-Marie Oppold, Markus Pfenninger
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0247174

Maternal effects on reproduction in the precocial European hare (Lepus europaeus)
Cited by: 8
Author(s): Stéphanie C. Schai-Braun, Peter Steiger, T. Ruf, Walter Arnold, Klaus Hackländer
Software Mentions: 3
Published: almost 4 years ago

10.1002/ece3.6393

Oceanic thermal structure mediates dive sequences in a foraging seabird
Cited by: 12
Author(s): Xavier Meyer, Andrew J. J. MacIntosh, André Chiaradia, Akiko Kato, Francisco Ramírez, Cédric Sueur, Yan Ropert‐Coudert
Software Mentions: 3
Published: over 4 years ago

10.3389/fmicb.2021.711000

Untargeted Metabolomics Investigation on Selenite Reduction to Elemental Selenium by Bacillus mycoides SeITE01
Cited by: 4
Author(s): Greta Baggio, Ryan A. Groves, Roberto Chignola, Elena Piacenza, Alessandro Presentato, Ian A. Lewis, Silvia Lampis, Giovanni Vallini, Raymond J. Turner
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-019-51927-x

Accumulating crop functional trait data with citizen science
Cited by: 10
Author(s): Marney E. Isaac, Adam R. Martin
Software Mentions: 3
Published: about 5 years ago

10.1007/s11356-018-1626-x

Factors determining the occurrence of anthropogenic materials in nests of the white stork Ciconia ciconia
Cited by: 41
Author(s): Zuzanna Jagiełło, Łukasz Dylewski, Dominika Winiarska, Katarzyna M. Żołnierowicz, Marcin Tobółka
Software Mentions: 3
Published: almost 7 years ago

10.3390/toxins12100644

Occurrence and Probabilistic Risk Assessment of Fumonisin B1, Fumonisin B2 and Deoxynivalenol in Nixtamalized Maize in Mexico City
Cited by: 9
Author(s): Ixchel Gilbert-Sandoval, Sebastiaan Wesseling, I.M.C.M. Rietjens
Software Mentions: 3
Published: about 4 years ago

10.3390/insects12050462

Monitoring Exotic Beetles with Inexpensive Attractants: A Case Study
Cited by: 10
Author(s): Enrico Ruzzier, Andrea Galli, Luciano Bani
Software Mentions: 3
Published: over 3 years ago

10.3389/fnbeh.2020.00138

Bolder and Brighter? Exploring Correlations Between Personality and Cognitive Abilities Among Individuals Within a Population of Wild Zebrafish, Danio rerio
Cited by: 9
Author(s): Danita K. Daniel, Anuradha Bhat
Software Mentions: 3
Published: over 4 years ago

10.3390/v11070662

Feline Foamy Virus Infection: Characterization of Experimental Infection and Prevalence of Natural Infection in Domestic Cats with and without Chronic Kidney Disease
Cited by: 20
Author(s): Carmen Ledesma-Feliciano, Ryan M. Troyer, Xin Zheng, Craig A. Miller, Rachel E. Cianciolo, Matteo Bordicchia, Nicholas G. Dannemiller, Roderick B. Gagne, Julia A. Beatty, Jessica M. Quimby, Martin Löchelt, Sue VandeWoude
Software Mentions: 3
Published: over 5 years ago

10.1002/ajpa.22280

The convergent evolution of blue iris pigmentation in primates took distinct molecular paths
Cited by: 14
Author(s): Wynn K. Meyer, Sidi Zhang, Shinya Hayakawa, Hiroo Imai, Molly Przeworski
Software Mentions: 3
Published: over 11 years ago

10.1098/rstb.2016.0302

The impact of control strategies and behavioural changes on the elimination of Ebola from Lofa County, Liberia
Cited by: 70
Author(s): Sebastian Funk, Iza Ciglenečki, Amanda Tiffany, Etienne Gignoux, Anton Camacho, Rosalind M Eggo, Kucharski Aj, Edmunds Wj, Josephus Bolongei, Phillip Azuma, Peter Clement, Alpha Ts, Esther Sterk, Barbara Telfer, Gregory Engel, Lucy Anne Parker, Motoi Suzuki, Nico Heijenberg, Bruce Reeder
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2019.02888

Beneficial Endophytic Bacteria-Serendipita indica Interaction for Crop Enhancement and Resistance to Phytopathogens
Cited by: 51
Author(s): Alejandro del Barrio-Duque, Johanna Ley, Abdul Samad, Livio Antonielli, Angela Sessitsch, Stéphane Compant
Software Mentions: 3
Published: about 5 years ago

10.1038/srep34439

Interspecific sensitivity of bees towards dimethoate and implications for environmental risk assessment
Cited by: 33
Author(s): Philipp Uhl, Lude Franke, Christina Rehberg, Claudia Wollmann, Peter Stahlschmidt, Lukas Jeker, Carsten A. Brühl
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0163435

Pneumococcal Serotypes Colonise the Nasopharynx in Children at Different Densities
Cited by: 12
Author(s): Fernanda Rodrigues, León Danon, Begonia Morales-Aza, Paulina Sikora, Valtýr Thors, Muriel Ferreira, Katherine A. Gould, Jason Hinds, Adam Finn
Software Mentions: 2
Published: about 8 years ago

10.1186/s12874-017-0437-y

Accounting for parameter uncertainty in the definition of parametric distributions used to describe individual patient variation in health economic models
Cited by: 19
Author(s): Koen Degeling, Maarten J. IJzerman, Miriam Koopman, Hendrik Koffijberg
Software Mentions: 2
Published: about 7 years ago

10.3390/vetsci8070132

Benefit–Risk Assessment of the French Surveillance Protocol of Apparently Healthy Biting Dogs and Cats for Human Rabies Prevention
Cited by: 1
Author(s): Guillaume Crozet, Tiffany Charmet, Florence Cliquet, Emmanuelle Robardet, Barbara Dufour, Julie Rivière
Software Mentions: 2
Published: over 3 years ago

10.1016/j.wroa.2021.100093

Predictive water virology using regularized regression analyses for projecting virus inactivation efficiency in ozone disinfection
Cited by: 9
Author(s): Syun suke Kadoya, Osamu Nishimura, Hiroyuki Kato, Daisuke Sano
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pntd.0008640

Leveraging multiple data types to estimate the size of the Zika epidemic in the Americas
Cited by: 19
Author(s): Sean M. Moore, Rachel J. Oidtman, Kenji Soda, Amir Siraj, Robert C. Reiner, Christopher M. Barker, T. Alex Perkins
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pntd.0003038

Shifting Patterns of Aedes aegypti Fine Scale Spatial Clustering in Iquitos, Peru
Cited by: 65
Author(s): Genevieve LaCon, Amy C. Morrison, Helvio Astete, Steven T. Stoddard, Valerie A. Paz-Soldán, John P. Elder, Eric S. Halsey, Thomas W. Scott, Uriel Kitron, Gonzalo M. Vázquez-Prokopec
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pntd.0006782

Improved methods to capture the total societal benefits of zoonotic disease control: Demonstrating the cost-effectiveness of an integrated control programme for Taenia solium, soil transmitted helminths and classical swine fever in northern Lao PDR
Cited by: 21
Author(s): Walter Okello, Anna Okello, Phouth Inthavong, Tassilo T. Tiemann, Ammaly Phengsivalouk, Brecht Devleesschauwer, Alexandra Shaw, John Allen
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0127630

Candidatus Frankia Datiscae Dg1, the Actinobacterial Microsymbiont of Datisca glomerata, Expresses the Canonical nod Genes nodABC in Symbiosis with Its Host Plant
Cited by: 74
Author(s): Tomas Persson, Kai Battenberg, Irina V. Demina, Theoden Vigil-Stenman, Brian Vanden Heuvel, Petar Pujic, Marc T. Facciotti, Elizabeth G. Wilbanks, Anna O'Brien, Pascale Fournier, Maria Antonia Cruz Hernandez, Alberto Herrera, Claudine Médigue, Philippe Normand, Katharina Pawlowski, Alison M. Berry
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0234303

Coupled fish-hydrogeomorphic responses to urbanization in streams of Columbus, Ohio, USA
Cited by: 7
Author(s): Leslie O. Rieck, Sean Sullivan
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0181305

Generalized structural equations improve sexual-selection analyses
Cited by: 23
Author(s): Sonia Lombardi, Giacomo Santini, Giovanni M. Marchetti, Stefano Focardi
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0249074

A review of reported network degree and recruitment characteristics in respondent driven sampling implications for applied researchers and methodologists
Cited by: 2
Author(s): Lisa Avery, Alison Macpherson, Sarah Flicker, Michael Rotondi
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0236515

Heterogeneity of synonymous substitution rates in the Xenopus frog genome
Cited by: 0
Author(s): Quintin Lau, Takeshi Igawa, Hitoshi Ogino, Yoshiteru Katsura, Toshimichi Ikemura, Yoko Satta
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0074055

Spatial Analysis of “Crazy Quilts”, a Class of Potentially Random Aesthetic Artefacts
Cited by: 6
Author(s): Gesche Westphal-Fitch, W. Tecumseh Fitch
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0197328

The great Indian joint families of free-ranging dogs
Cited by: 12
Author(s): Manabi Paul, Anindita Bhadra
Software Mentions: 2
Published: over 6 years ago

10.1002/ece3.7854

Dominance determines fish community biomass in a temperate seagrass ecosystem
Cited by: 3
Author(s): Aaron M. Eger, Rebecca J. Best, Julia K. Baum
Software Mentions: 2
Published: over 3 years ago

10.1002/ece3.6986

Coupling between tolerance and resistance for two related Eimeria parasite species
Cited by: 5
Author(s): Alice Balard, Víctor Hugo Jarquín‐Díaz, Jenny Jost, Thomas Thieme, Francisca Böhning, Ľudovít Ďureje, Jaroslav Piálek, Emanuel Heitlinger
Software Mentions: 2
Published: about 4 years ago

10.1016/j.epidem.2021.100476

Modelling SARS-CoV-2 transmission in a UK university setting
Cited by: 16
Author(s): Edward M. Hill, Benjamin D. Atkins, Matthew James Keeling, Michael J. Tildesley, Louise Dyson
Software Mentions: 2
Published: over 3 years ago

10.14252/foodsafetyfscj.D-20-00004

Quantitative Release Assessment of mcr-mediated Colistin-resistant Escherichia Coli from Japanese Pigs
Cited by: 6
Author(s): Kohei Makita, Yoshiyuki Fujimoto, Nami Sugahara, Takeshi Miyama, Masaru Usui, Tetsuo Asai, Michihiro Kawanishi, Manao Ozawa, Yutaka Tsutsumi
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2018.02304

Learning Something From Nothing: The Critical Importance of Rethinking Microbial Non-detects
Cited by: 26
Author(s): Alex Ho Shing Chik, Philip J. Schmidt, Monica B. Emelko
Software Mentions: 2
Published: about 6 years ago

10.1186/s13321-017-0199-x

The polypharmacology browser: a web-based multi-fingerprint target prediction tool using ChEMBL bioactivity data
Cited by: 76
Author(s): Mahendra Awale, Jean‐Louis Reymond
Software Mentions: 2
Published: almost 8 years ago

10.1098/rsos.150694

Restricted grouper reproductive migrations support community-based management
Cited by: 11
Author(s): Peter A. Waldie, Glenn R. Almany, Tane H. Sinclair‐Taylor, Richard Hamilton, Tapas Potuku, Mark A. Priest, Kevin L. Rhodes, Jan Robinson, Joshua E. Cinner, Michael L. Berumen
Software Mentions: 2
Published: almost 9 years ago

10.1038/srep23198

Tracking neighbours promotes the coexistence of large carnivores
Cited by: 27
Author(s): José Vicente López‐Bao, Jenny Mattisson, Jens Persson, Malin Aronsson, Henrik Andrén
Software Mentions: 2
Published: almost 9 years ago

10.1038/srep28555

Prevalence and Dynamics of Ribosomal DNA Micro-heterogeneity Are Linked to Population History in Two Contrasting Yeast Species
Cited by: 4
Author(s): Stephen A. James, Claire West, Robert P. Davey, Jo Dicks, Ian N. Roberts
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-019-46799-0

Macaques preferentially attend to visual patterns with higher fractal dimension contours
Cited by: 2
Author(s): Kelly R. Finn, James P. Crutchfield, Eliza Bliss‐Moreau
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-52947-3

A dose response model for quantifying the infection risk of antibiotic-resistant bacteria
Cited by: 20
Author(s): Srikiran Chandrasekaran, Sunny C. Jiang
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-79304-z

Currently monitored microplastics pose negligible ecological risk to the global ocean
Cited by: 58
Author(s): Ricardo Beiras, Alexandre M. Schönemann
Software Mentions: 2
Published: about 4 years ago

10.1038/s41396-021-00915-z

Small phytoplankton contribute greatly to CO2-fixation after the diatom bloom in the Southern Ocean
Cited by: 14
Author(s): Solène Irion, Urania Christaki, Hugo Berthelot, Stéphane L’Helguen, Ludwig Jardillier
Software Mentions: 2
Published: almost 4 years ago

10.7554/eLife.58997

Pathway-specific dysregulation of striatal excitatory synapses by LRRK2 mutations
Cited by: 21
Author(s): Chuyu Chen, Giulia Soto, Vasin Dumrongprechachan, Nicholas M. Bannon, Shuo Kang, Yevgenia Kozorovitskiy, Loukia Parisiadou
Software Mentions: 2
Published: about 4 years ago

10.1093/plankt/fbab042

Seasonal variability in non-consumptive mortality of Arctic zooplankton
Cited by: 12
Author(s): Malin Daase, Janne E. Søreide
Software Mentions: 2
Published: over 3 years ago

10.1186/s12889-021-10868-9

Estimation of the serial interval and proportion of pre-symptomatic transmission events of COVID− 19 in Ireland using contact tracing data
Cited by: 9
Author(s): Conor G. McAloon, Patrick Wall, John M. Griffin, Miriam Casey, Ann Barber, Mary Codd, Eamonn Gormley, Francis Butler, Locksley L. McV. Messam, Cathal Walsh, Conor Teljeur, Bruce Smyth, Philip Nolan, Martin J. Green, Luke O’Grady, Kieran Culhane, Claire Buckley, Ciara Carroll, Sheila Doyle, Jennifer Martin, Simon J. More
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-019-47805-1

Assessment of risk to hoary squash bees (Peponapis pruinosa) and other ground-nesting bees from systemic insecticides in agricultural soil
Cited by: 66
Author(s): D. Susan Willis Chan, Ryan S. Prosser, José Luis Rodríguez‐Gil, Nigel E. Raine
Software Mentions: 1
Published: over 5 years ago

10.1007/s10661-017-6279-6

Microbiological risk infection assessment using QMRA in agriculture systems in Côte d’Ivoire, West Africa
Cited by: 28
Author(s): Parfait K. Kouamé, Hung Nguyen-Viet, Kouassi Dongo, Christian Zurbrügg, Jean Barthélemy, Bassirou Bonfoh
Software Mentions: 1
Published: about 7 years ago

10.1186/s12898-016-0057-0

Optimal methods for fitting probability distributions to propagule retention time in studies of zoochorous dispersal
Cited by: 5
Author(s): Duarte S. Viana, Luis Santamarı́a, Jordi Figuerola
Software Mentions: 1
Published: almost 9 years ago

Projects: cran: fitdistrplus

Papers Mentioning fitdistrplus 120