cran: corrplot | Projects | Ecosyste.ms: Papers

10.7717/peerj.10539

Composition and distribution of fish environmental DNA in an Adirondack watershed
Cited by: 2
Author(s): Robert S. Cornman, James E. McKenna, Jennifer A. Fike
Software Mentions: 5
Published: over 3 years ago

10.7717/peerj.11422

The relationship between PLOD1 expression level and glioma prognosis investigated using public databases
Cited by: 5
Author(s): Lei Tian, Huandi Zhou, Guohui Wang, Wen Yan Wang, Yuehong Li, Xiaoying Xue
Software Mentions: 5
Published: over 3 years ago

10.3389/fcell.2021.730240

Multi-Omics Analysis of the Anti-tumor Synergistic Mechanism and Potential Application of Immune Checkpoint Blockade Combined With Lenvatinib
Cited by: 4
Author(s): Yuting Lu, Juebin Jin, Qian Du, Min Hu, Yuhan Wei, Miao Wang, Hongzhong Li, Li Qin
Software Mentions: 5
Published: about 3 years ago

10.3389/fonc.2019.01206

Exploration of the Transcriptional Landscape of ALPPS Reveals the Pathways of Accelerated Liver Regeneration
Cited by: 11
Author(s): Pieter Borger, Marcel Schneider, Lukas Frick, Magda Langiewicz, Maksim Sorokin, Anton Buzdin, Ekaterina Kachaylo, Rolf Graf, Bostjan Humar, Pierre‐Alain Clavien
Software Mentions: 5
Published: about 5 years ago

10.3390/ijms21010145

Gene Copy Number and Post-Transductional Mechanisms Regulate TRAP1 Expression in Human Colorectal Carcinomas
Cited by: 3
Author(s): Michele Pietrafesa, Francesca Maddalena, Luciana Possidente, Valentina Condelli, Pietro Zoppoli, Valeria Li Bergolis, Maria Grazia Rodriquenz, Michele Aieta, Giulia Vita, Franca Esposito, Matteo Landriscina
Software Mentions: 5
Published: almost 5 years ago

10.3389/fpls.2020.607213

Genome-Wide Association Study Reveals Candidate Genes Involved in Fruit Trait Variation in Persian Walnut (Juglans regia L.)
Cited by: 8
Author(s): Anthony Bernard, Julie Crabier, Armel Donkpegan, Annarita Marrano, Fabrice Lheureux, Elisabeth Dirlewanger
Software Mentions: 4
Published: almost 4 years ago

10.3389/fpls.2018.01526

Responses of the Endophytic Bacterial Communities of Juncus acutus to Pollution With Metals, Emerging Organic Pollutants and to Bioaugmentation With Indigenous Strains
Cited by: 32
Author(s): Evdokia Syranidou, Sofie Thijs, Marina Avramidou, Nele Weyens, Danae Venieri, Isabel Pintelon, Jaco Vangronsveld, Nicolas Kalogerakis
Software Mentions: 4
Published: about 6 years ago

10.1007/s10519-019-09951-0

A Genetic Investigation of the Well-Being Spectrum
Cited by: 35
Author(s): Bart M. L. Baselmans, Margot P van de Weijer, Abdel Abdellaoui, Jacqueline M. Vink, Jouke Jan Hottenga, Gonneke Willemsen, Michel G. Nivard, Eco J. C. de Geus, Dorret I. Boomsma, Meike Bartels
Software Mentions: 4
Published: over 5 years ago

10.1097/j.pain.0000000000001880

The impact of bone cancer on the peripheral encoding of mechanical pressure stimuli
Cited by: 12
Author(s): M. Kucharczyk, Kim I. Chisholm, Franziska Denk, Anthony H. Dickenson, Kirsty Bannister, Stephen B. McMahon
Software Mentions: 4
Published: over 4 years ago

10.3389/fcell.2020.562662

Identifying Mechanisms of Normal Cognitive Aging Using a Novel Mouse Genetic Reference Panel
Cited by: 6
Author(s): Amy R. Dunn, Niran Hadad, Sarah M. Neuner, Jigang Zhang, Vivek Philip, Logan Dumitrescu, Timothy J. Hohman, Jeremy H. Herskowitz, Kathryn A O’Connell, Catherine C. Kaczorowski
Software Mentions: 4
Published: about 4 years ago

10.3389/fpls.2021.627432

Drivers of Natural Variation in Water-Use Efficiency Under Fluctuating Light Are Promising Targets for Improvement in Sorghum
Cited by: 21
Author(s): Charles P. Pignon, Andrew D. B. Leakey, Stephen P. Long, Johannes Kromdijk
Software Mentions: 4
Published: almost 4 years ago

10.3389/fmicb.2020.00650

Fine Resolution Analysis of Microbial Communities Provides Insights Into the Variability of Cocoa Bean Fermentation
Cited by: 21
Author(s): Mauricio Pacheco-Montealegre, Lizeth Lorena Dávila-Mora, Lina Marcela Botero-Rute, Alejandro Reyes, Alejandro Caro‐Quintero
Software Mentions: 4
Published: over 4 years ago

10.3390/v13010009

Characterization of a Novel Mitovirus of the Sand Fly Lutzomyia longipalpis Using Genomic and Virus–Host Interaction Signatures
Cited by: 14
Author(s): Paula Luize Camargos Fonseca, Flávia V Ferreira, Felipe Silva, Liliane Santana Oliveira, João Trindade Marques, Aristóteles Goés-Neto, Eric Roberto Guimarães Rocha Aguiar, Arthur Gruber
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12889-019-7900-0

Comparative knowledge, attitudes, and practices regarding anthrax, brucellosis, and rabies in three districts of northern Tanzania
Cited by: 9
Author(s): Christian Kiffner, Michelle Latzer, Ruby Vise, Hayley Benson, Elizabeth Hammon, John Kioko
Software Mentions: 4
Published: almost 5 years ago

10.3389/fnbeh.2018.00272

Oxytocin Manipulation Alters Neural Activity in Response to Social Stimuli in Eusocial Naked Mole-Rats
Cited by: 4
Author(s): Mariela Faykoo-Martinez, Skyler J. Mooney, Melissa M. Holmes
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2017.00138

Feeding a High Concentration Diet Induces Unhealthy Alterations in the Composition and Metabolism of Ruminal Microbiota and Host Response in a Goat Model
Cited by: 71
Author(s): Chenlei Hua, Jing Tian, Ping Tian, Rihua Cong, Yanwen Luo, Geng Yang, Shiyu Tao, Yingdong Ni, Ruqian Zhao
Software Mentions: 4
Published: almost 8 years ago

10.1093/jisesa/ieab027

Field Borders Provide Winter Refuge for Beneficial Predators and Parasitoids: A Case Study on Organic Farms
Cited by: 7
Author(s): C. Scott Clem, Alexandra N. Harmon‐Threatt
Software Mentions: 4
Published: over 3 years ago

10.3390/foods10071572

Characterization of Nutritional Quality Traits of a Common Bean Germplasm Collection
Cited by: 15
Author(s): Ester Murube, Romina Beleggia, Deborah Pacetti, Ancuta Nartea, Giulia Frascarelli, Giovanna Lanzavecchia, Elisa Bellucci, Laura Nanni, Tania Gioia, Ugo Marciello, Stefania Esposito, Giacomo Foresi, Giuseppina Logozzo, Giuseppe Natale Frega, Elena Bitocchi, Roberto Papa
Software Mentions: 4
Published: over 3 years ago

10.3389/fpls.2021.619634

Comparative Metabolite and Gene Expression Analyses in Combination With Gene Characterization Revealed the Patterns of Flavonoid Accumulation During Cistus creticus subsp. creticus Fruit Development
Cited by: 6
Author(s): Neda Aničić, Efstathia Patelou, Antigoni Papanikolaou, Anthi Kanioura, Camilla Valdesturli, Panagiotis Arapitsas, Marijana Škorić, Milan Dragićević, Uroš Gašić, Αθανάσιος Κουκουνάρας, Stefanos Kostas, Eirini Sarrou, Stefan Martens, Danijela Mišić, Angelos K. Kanellis
Software Mentions: 4
Published: over 3 years ago

10.1128/mSystems.00162-20

Soil Carbon, Nitrogen, and Phosphorus Cycling Microbial Populations and Their Resistance to Global Change Depend on Soil C:N:P Stoichiometry
Cited by: 75
Author(s): Gongwen Luo, Cong Xue, Qianhong Jiang, Yan Xiao, Fengge Zhang, Shiwei Guo, Qirong Shen
Software Mentions: 4
Published: over 4 years ago

10.1128/mSystems.00384-21

Lactobacillus acidophilus LA14 Alleviates Liver Injury
Cited by: 25
Author(s): Longxian Lv, Chunyan Yao, Yan Ren, Huiyong Jiang, Qiangqiang Wang, Kaicen Wang, Siqi Ren, Shandong Jiang, Jiafeng Xia, Shengjie Li, Ying Yu
Software Mentions: 4
Published: over 3 years ago

10.3389/fpls.2020.620832

Microcutting Redox Profile and Anatomy in Eucalyptus spp. With Distinct Adventitious Rooting Competence
Cited by: 9
Author(s): Johnatan Vilasboa, Cibele Tesser da Costa, Leonardo Girardi Ransan, Jorge Ernesto de Araújo Mariath, Arthur Germano Fett-Neto
Software Mentions: 4
Published: almost 4 years ago

10.3389/fmicb.2016.00582

Development of Ruminal and Fecal Microbiomes Are Affected by Weaning But Not Weaning Strategy in Dairy Calves
Cited by: 123
Author(s): S. J. Meale, Shucong Li, Paula Azevedo, Hooman Derakhshani, J.C. Plaizier, Ehsan Khafipour, M.A. Steele
Software Mentions: 4
Published: over 8 years ago

10.1128/mBio.01229-21

Diverse Humoral Immune Responses in Younger and Older Adult COVID-19 Patients
Cited by: 18
Author(s): Jennifer Sasson, Joseph J. Campo, Rebecca Carpenter, Mary K. Young, Arlo Randall, Krista Trappl-Kimmons, Amit Oberai, Christopher Hung, Joshua Edgar, Andy Teng, Jozelyn Pablo, Xiaowu Liang, Angela Yee, William A. Petri, David Camerini
Software Mentions: 4
Published: over 3 years ago

10.1186/s12870-016-0789-1

Transcriptome profiling of grapevine seedless segregants during berry development reveals candidate genes associated with berry weight
Cited by: 17
Author(s): Claudia Muñoz-Espinoza, Alex Di Génova, Juan Correa, Romina Silva, Alejandro Maass, Mauricio González-Agüero, Ariel Orellana, Patricio Hinrichsen
Software Mentions: 4
Published: over 8 years ago

10.1128/mBio.01451-21

Host Colonization as a Major Evolutionary Force Favoring the Diversity and the Emergence of the Worldwide Multidrug-Resistant Escherichia coli ST131
Cited by: 10
Author(s): Richard Bonnet, Racha Beyrouthy, Marisa Haenni, Marie–Hélène Nicolas–Chanoine, Guillaume Dalmasso, Jean‐Yves Madec
Software Mentions: 4
Published: about 3 years ago

10.1080/22221751.2018.1563458

Differential effects of depot medroxyprogesterone acetate administration on vaginal microbiome in Hispanic White and Black women
Cited by: 22
Author(s): Liying Yang, Yuhan Hao, Jiyuan Hu, Dervla Kelly, Hui-Lin Li, Stuart M. Brown, Carley Tasker, Natalie Roche, Theresa L. Chang, Zhiheng Pei
Software Mentions: 4
Published: almost 6 years ago

10.1101/2021.08.30.458273

Intravenous administration of BCG protects mice against lethal SARS-CoV-2 challenge
Cited by: 1
Author(s): Kerry L. Hilligan, Sivaranjani Namasivayam, Chad S. Clancy, Sandra D. Oland, Shelly J. Robertson, Paul J. Baker, Ehydel Castro, Nicole L. Garza, Bernard A. P. Lafont, Reed F. Johnson, Franca Ronchese, Katrin D. Mayer‐Barber, Sonja M. Best, Alan Sher
Software Mentions: 4
Published: about 3 years ago

10.1002/ece3.6093

Using genomic information for management planning of an endangered perennial,Viola uliginosa
Cited by: 9
Author(s): Kyung Min Lee, Pertti Ranta, Jarmo Saarikivi, Lado Kutnar, Branko Vreš, М. А. Джус, Marko Mutanen, Laura Kvist
Software Mentions: 4
Published: almost 5 years ago

10.1016/j.molcel.2018.08.020

Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures
Cited by: 206
Author(s): Thomas Clouaire, Vincent Rocher, Anahita Lashgari, Coline Arnould, Marion Aguirrebengoa, Anna Biernacka, Magdalena Skrzypczak, François Aymard, Bernard Fongang, Norbert Dojer, Jason S. Iacovoni, Maga Rowicka, Krzysztof Ginalski, Jacques Côté, Gaëlle Legube
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.3569

Energy determines broad pattern of plant distribution in Western Himalaya
Cited by: 29
Author(s): Rutuparna Panda, Mukunda Dev Behera, P. S. Roy, Chandrashekhar Biradar
Software Mentions: 4
Published: about 7 years ago

10.18632/aging.102824

Profiles of immune cell infiltration and immune-related genes in the tumor microenvironment of osteosarcoma
Cited by: 103
Author(s): Chi Zhang, Jinghui Zheng, Zong-Han Lin, Haoyuan Lv, Zhuo-Miao Ye, Yueping Chen, Xiaoyun Zhang
Software Mentions: 4
Published: almost 5 years ago

10.3390/microorganisms9071503

Metagenomic Insight of a Full Scale Eco-Friendly Treatment System of Textile Dye Wastewater Using Bioaugmentation of the Composite Culture CES-1
Cited by: 6
Author(s): Aalfin-Emmanuel Santhanarajan, Woo Jun Sul, Keunje Yoo, Hoon Je Seong, Hong Gi Kim, Sung-Cheol Koh
Software Mentions: 4
Published: over 3 years ago

10.1002/ece3.3248

Spatial patterns of hypolithic cyanobacterial diversity in Northern Australia
Cited by: 5
Author(s): Keith A. Christian, Mirjam Kaestli, Karen S. Gibb
Software Mentions: 4
Published: over 7 years ago

10.1186/s12866-020-02026-9

A longitudinal study on morpho-genetic diversity of pathogenic Rhizoctonia solani from sugar beet and dry beans of western Nebraska
Cited by: 4
Author(s): Saurav Das, T. Plyler-Harveson, Dipak K. Santra, Bijesh Maharjan, Kathy A. Nielson, Robert M. Harveson
Software Mentions: 4
Published: about 4 years ago

10.1016/j.csbj.2020.12.040

A theoretical and generalized approach for the assessment of the sample-specific limit of detection for clinical metagenomics
Cited by: 17
Author(s): Arnt Ebinger, Susanne Fischer, Dirk W. Höper
Software Mentions: 4
Published: almost 4 years ago

10.3390/antiox10030498

Characterization of NADPH Oxidase Expression and Activity in Acute Myeloid Leukemia Cell Lines: A Correlation with the Differentiation Status
Cited by: 10
Author(s): Hassan Dakik, Maya El Dor, Joan Leclerc, Farah Kouzi, Ali Nehme, Margaux Deynoux, Christelle Debeissat, Georges Khamis, Elfi Ducrocq, Aida Ibrik, Marie‐José Stasia, Houssam Raad, Hamid Reza Rezvani, Fabrice Gouilleux, Kazem Zibara, Olivier Hérault, Frédéric Mazurier
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-021-95455-z

Evaluation of two highly effective lipid-lowering therapies in subjects with acute myocardial infarction
Cited by: 6
Author(s): Aline Klassen, Andréa Tedesco Faccio, Carolina R. C. Picossi, Priscilla Bento Matos Cruz Derogis, Carlos Eduardo dos Santos Ferreira, Aline Soriano Lopes, Alessandra Sussulini, Elisa Castañeda Santa Cruz, Rafaela Tudela Bastos, Stefanie Caroline Fontoura, Antônio Martins Figueiredo Neto, Marina Franco Maggi Tavares, Maria Cristina Izar, Francisco Antônio Helfenstein Fonseca
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2021.701273

Immune Signature Linked to COVID-19 Severity: A SARS-Score for Personalized Medicine
Cited by: 5
Author(s): Jules Russick, Pierre-Emmanuel Foy, Nathalie Josseaume, Maxime Meylan, Nadine Benhamouda, Amos Kirilovsky, Carine El Sissy, Éric Tartour, David Smadja, Alexandre Karras, Jean‐Sébastien Hulot, Marine Livrozet, Antoine Fayol, Jean‐Benoît Arlet, Jean‐Luc Diehl, Marie-Agnès Dragon-Durey, Franck Pagès, Isabelle Cremer
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-021-90226-2

Refinement of 16S rRNA gene analysis for low biomass biospecimens
Cited by: 8
Author(s): Remy Villette, Gaëlle Autaa, Sophie Hind, Johanna B. Holm, Alicia Moreno-Sabater, Martin Larsen
Software Mentions: 4
Published: over 3 years ago

10.1038/s42003-021-02254-3

Plasma methionine metabolic profile is associated with longevity in mammals
Cited by: 7
Author(s): Natàlia Mota‐Martorell, Mariona Jové, Rebeca Berdún, Reinald Pamplona
Software Mentions: 4
Published: over 3 years ago

10.3390/microorganisms9010157

The Effect of a High-Grain Diet on the Rumen Microbiome of Goats with a Special Focus on Anaerobic Fungi
Cited by: 13
Author(s): K. Fliegerová, Sabine Marie Podmirseg, Julia Vinzelj, Diego Grilli, Simona Kvasnová, Dagmar Schierová, Hana Sechovcová, Jakub Mrázek, Giuliana Siddi, Graciela Nora Arenas, Giuseppe Moniello
Software Mentions: 4
Published: almost 4 years ago

10.1038/s42003-020-0891-7

Chytrid fungi distribution and co-occurrence with diatoms correlate with sea ice melt in the Arctic Ocean
Cited by: 25
Author(s): Estelle Kilias, Leandro Junges, Luka Šupraha, Guy Leonard, Katja Metfies, Thomas A. Richards
Software Mentions: 4
Published: over 4 years ago

10.3390/microorganisms9020294

Potential Association between Vaginal Microbiota and Cervical Carcinogenesis in Korean Women: A Cohort Study
Cited by: 23
Author(s): Gi-Ung Kang, Da-Ryung Jung, Yoon Hee Lee, Se Young Jeon, Hyung Soo Han, Gun Oh Chong, Jae‐Ho Shin
Software Mentions: 4
Published: almost 4 years ago

10.1002/ctm2.434

Integrated transcriptional‐phenotypic analysis captures systemic immunomodulation following antiangiogenic therapy in renal cell carcinoma patients
Cited by: 3
Author(s): Darawan Rinchai, Elena Verzoni, Veronica Huber, Agata Cova, Paola Squarcina, Loris De Cecco, Filippo de Braud, Raffaele Ratta, Matteo Dugo, Luca Lalli, Viviana Vallacchi, Monica Rodolfo, Jessica Roelands, Chiara Castelli, Damien Chaussabel, Giuseppe Procopio, Davide Bedognetti, Licia Rivoltini
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2021.740708

Evidence of SARS-CoV-2-Specific Memory B Cells Six Months After Vaccination With the BNT162b2 mRNA Vaccine
Cited by: 78
Author(s): Annalisa Ciabattini, Gabiria Pastore, Fabio Fiorino, Jacopo Polvere, Simone Lucchesi, Elena Pettini, Stefano Auddino, Ilaria Rancan, Miriam Durante, Michele Miscia, Barbara Rossetti, Massimiliano Fabbiani, Francesca Montagnani, Donata Medaglini
Software Mentions: 4
Published: about 3 years ago

10.1186/s40168-021-01046-5

Androgen-induced gut dysbiosis disrupts glucolipid metabolism and endocrinal functions in polycystic ovary syndrome
Cited by: 39
Author(s): Qixin Han, Juan Wang, Weiping Li, Zi‐Jiang Chen, Yanzhi Du
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-021-81407-0

Surface slicks are pelagic nurseries for diverse ocean fauna
Cited by: 24
Author(s): Jonathan L. Whitney, Jamison M. Gove, Margaret A. McManus, Katharine A. Smith, Joey Lecky, Philipp Neubauer, Jana E. Phipps, Emily A. Contreras, Donald R. Kobayashi, Gregory P. Asner
Software Mentions: 4
Published: almost 4 years ago

10.3390/cells9061491

Conserved Small Nucleotidic Elements at the Origin of Concerted piRNA Biogenesis from Genes and lncRNAs
Cited by: 7
Author(s): Silke Jensen, Emilie Brasset, Elise Parey, Hugues Roest Crollius, Igor V. Sharakhov, Chantal Vaury
Software Mentions: 4
Published: over 4 years ago

10.1186/s12920-020-0682-5

A pan-cancer study of class-3 semaphorins as therapeutic targets in cancer
Cited by: 37
Author(s): Xiaoli Zhang, Brett Klamer, Jin Li, Soledad Fernández, Lang Li
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-020-78589-4

GRAS-Di system facilitates high-density genetic map construction and QTL identification in recombinant inbred lines of the wheat progenitor Aegilops tauschii
Cited by: 16
Author(s): Yuka Miki, Kentaro Yoshida, Hiroyuki Enoki, Saburô Kômura, Kazuko Suzuki, Minoru Inamori, Ryo Nishijima, Shigeo Takumi
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-020-75400-2

A systems genomics approach to uncover the molecular properties of cancer genes
Cited by: 0
Author(s): Felix Graßmann, Yudi Pawitan, Kamila Czene
Software Mentions: 4
Published: about 4 years ago

10.1080/07853890.2021.1918346

Effect of unfolded protein response on the immune infiltration and prognosis of transitional cell bladder cancer
Cited by: 3
Author(s): Xueting Yan, Min Chen, Chiying Xiao, Jia-Yin Fu, Xia Sun, Zuohuai Hu, Huaqiang Zhou
Software Mentions: 4
Published: almost 4 years ago

10.3389/fonc.2021.704994

Enhanced CT-Based Radiomics to Predict Micropapillary Pattern Within Lung Invasive Adenocarcinoma
Cited by: 4
Author(s): Yunyu Xu, Wenbin Ji, Liqiao Hou, Shuangxiang Lin, Yangyang Shi, Chao Zhou, Yinnan Meng, Wei Wang, Xiaofeng Chen, Meihao Wang, Haihua Yang
Software Mentions: 4
Published: about 3 years ago

10.1186/s12913-020-05989-7

Social determinants of health and hospital readmissions: can the HOSPITAL risk score be improved by the inclusion of social factors?
Cited by: 4
Author(s): Shirlene Obuobi, Rhys Chua, Stephanie Besser, Corey E. Tabit
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-020-73948-7

Physical properties of epilithic river biofilm as a new lead to perform pollution bioassessments in overseas territories
Cited by: 3
Author(s): Dominique Monti, Cédric Hubas, Xavier Lourenço, Farid Begarin, Alexandre Haouisée, Laurence Romana, Estelle Lefrançois, Alexandra Jestin, Hélène Budzinski, Nathalie Tapie, Théo Risser, Jean-Louis Mansot, Philippe Keith, Olivier Gros, Pascal J. Lopez, Béatrice Lauga
Software Mentions: 4
Published: about 4 years ago

10.1186/s12864-020-6717-7

Genetic dissection of heat-responsive physiological traits to improve adaptation and increase yield potential in soft winter wheat
Cited by: 9
Author(s): Sumit Pradhan, Ali Babar, Guihua Bai, Jahangir Khan, Dipendra Shahi, Muhsin Avci, Jia Guo, Jordan C. McBreen, Senthold Asseng, Salvador A. Gezan, Byung‐Kee Baik, Ann R. Blount, Stephen A. Harrison, Suraj Sapkota, Paul St. Amand, Sanju Kunwar
Software Mentions: 4
Published: over 4 years ago

10.3389/fpls.2021.626301

Seed Priming With Protein Hydrolysates Improves Arabidopsis Growth and Stress Tolerance to Abiotic Stresses
Cited by: 25
Author(s): Mirella Sorrentino, Nuria De Diego, Lydia Ugena, Lukáš Spíchal, Luigi Lucini, Begoña Miras-Moreno, Leilei Zhang, Youssef Rouphael, G. Colla, Klára Panzarová
Software Mentions: 4
Published: over 3 years ago

10.1186/s40168-017-0362-7

Dietary changes in nutritional studies shape the structural and functional composition of the pigs’ fecal microbiome—from days to weeks
Cited by: 54
Author(s): Bruno Tilocca, Katharina Burbach, Charlotte M E Heyer, Ludwig E. Hoelzle, R. Mosenthin, Volker Stefanski, Amélia Camarinha‐Silva, Jana Seifert
Software Mentions: 4
Published: about 7 years ago

10.1038/s41598-020-66861-6

Estimation of homeostatic dysregulation and frailty using biomarker variability: a principal component analysis of hemodialysis patients
Cited by: 18
Author(s): Yuichi Nakazato, Tomoko Sugiyama, Rena Ohno, Hirofumi Shimoyama, Diana Leung, Alan A. Cohen, R Kurane, Satoru Hirose, Akira Watanabe, Hiromi Shimoyama
Software Mentions: 4
Published: over 4 years ago

10.1002/acn3.51275

Subcortical short‐term plasticity elicited by deep brain stimulation
Cited by: 16
Author(s): Mohammad Z. Awad, Ryan J. Vaden, Zachary T. Irwin, Christopher L. Gonzalez, Sarah D. Black, Arie Nakhmani, Byron C. Jaeger, J. Nicole Bentley, Barton L. Guthrie, Harrison C. Walker
Software Mentions: 4
Published: over 3 years ago

10.3390/cancers13122948

DNA Methylation-Based Estimates of Circulating Leukocyte Composition for Predicting Colorectal Cancer Survival: A Prospective Cohort Study
Cited by: 2
Author(s): Xīn Gào, Yan Zhang, Xiangwei Li, Lina Jansen, Elizabeth Alwers, Melanie Bewerunge-Hudler, Matthias Schick, Jenny Chang‐Claude, Michael Hoffmeister, Hermann Brenner
Software Mentions: 4
Published: over 3 years ago

10.3390/cancers12071816

Characterization of Class-3 Semaphorin Receptors, Neuropilins and Plexins, as Therapeutic Targets in a Pan-Cancer Study
Cited by: 16
Author(s): Xiaoli Zhang, Shuai Shao, Lang Li
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-018-34453-0

Maternal High-Fat Diet Programs Offspring Liver Steatosis in a Sexually Dimorphic Manner in Association with Changes in Gut Microbial Ecology in Mice
Cited by: 64
Author(s): Umesh D. Wankhade, Ying Zhang, Ping Kang, Maria P. Alfaro, Sree V. Chintapalli, Brian D. Piccolo, Kelly E. Mercer, Aline Andres, Keshari Thakali, Kartik Shankar
Software Mentions: 4
Published: about 6 years ago

10.3390/cancers11040561

Expression Profiling of Calcium Channels and Calcium-Activated Potassium Channels in Colorectal Cancer
Cited by: 47
Author(s): İbrahim Şehitoğlu, Hassan Dakik, Christophe Vandier, Romain Chautard, Gilles Paintaud, Frédéric Mazurier, Thierry Lecomte, Maxime Guéguinou, William Raoul
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-018-34190-4

Milk Metabolomics Data Reveal the Energy Balance of Individual Dairy Cows in Early Lactation
Cited by: 31
Author(s): Wei Xu, Jacques Vervoort, Edoardo Saccenti, Renny van Hoeij, B. Kemp, A.T.M. van Knegsel
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-018-29932-3

Poultry and beef meat as potential seedbeds for antimicrobial resistant enterotoxigenic Bacillus species: a materializing epidemiological and potential severe health hazard
Cited by: 24
Author(s): Kamelia M. Osman, Anthony D. Kappell, Ahmed Orabi, Khalid S. Almaary, Ayman Mubarak, Turki M. Dawoud, Hassan A. Hemeg, Ihab M. Moussa, Ashgan M. Hessain, Hend M. Y. Yousef, Krassimira R. Hristova
Software Mentions: 4
Published: over 6 years ago

10.3390/ani11071849

Environmental Streptococcus uberis Associated with Clinical Mastitis in Dairy Cows: Virulence Traits, Antimicrobial and Biocide Resistance, and Epidemiological Typing
Cited by: 10
Author(s): Norhan K. Abd El-Aziz, Ahmed M. Ammar, Hend M. El Damaty, Rehab A. Abd Elkader, Hosam A. Saad, Waleed El-Kazzaz, Eman Khalifa
Software Mentions: 4
Published: over 3 years ago

10.1111/eva.12650

Human activities and landscape features interact to closely define the distribution and dispersal of an urban commensal
Cited by: 23
Author(s): Qian Tang, Grace Kah Mun Low, John Lim, Chyi Yin Gwee, Frank E. Rheindt
Software Mentions: 4
Published: over 6 years ago

10.1128/mSphere.00525-21

Proteorhodopsin Phototrophy in Antarctic Coastal Waters
Cited by: 2
Author(s): Jerónimo Cifuentes-Anticevic, María E. Alcamán-Arias, Tomás Alarcón-Schumacher, Javier Tamayo-Leiva, Carlos Pedrós-Alió, Laura Farı́as, Beatriz Dı́ez
Software Mentions: 4
Published: about 3 years ago

10.3389/fgene.2020.00912

Identification and Validation of an Immunological Expression-Based Prognostic Signature in Breast Cancer
Cited by: 7
Author(s): Jianying Pei, Yan Li, Tianxiong Su, Qiaomei Zhang, Xiaohai He, Dan Tao, Yanyun Wang, Manqiu Yuan, Yanping Li
Software Mentions: 4
Published: about 4 years ago

10.3389/fimmu.2020.01577

Methylation vs. Protein Inflammatory Biomarkers and Their Associations With Cardiovascular Function
Cited by: 4
Author(s): Héléne T. Cronjé, Hannah R Elliott, Cornelie Nienaber-Rousseau, Fiona R. Green, Aletta E. Schutte, Marlien Pieters
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-018-32670-1

Aphid infestation in the phyllosphere affects primary metabolic profiles in the arbuscular mycorrhizal hyphosphere
Cited by: 10
Author(s): Carmina Cabral, Bernd Wollenweber, Carla António, Ana Margarida Rodrigues, Sabine Ravnskov
Software Mentions: 4
Published: about 6 years ago

10.1186/s12864-016-3131-2

Unraveling the molecular basis of oxidative stress management in a drought tolerant rice genotype Nagina 22
Cited by: 24
Author(s): Chandra Prakash, S. V. Amitha Mithra, Praveen Singh, Trilochan Mohapatra, Nagendra Singh
Software Mentions: 4
Published: about 8 years ago

10.3389/fnut.2020.00126

Seed Composition and Amino Acid Profiles for Quinoa Grown in Washington State
Cited by: 23
Author(s): Evan B. Craine, Kevin M. Murphy
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0190094

Wine yeast phenomics: A standardized fermentation method for assessing quantitative traits of Saccharomyces cerevisiae strains in enological conditions
Cited by: 26
Author(s): Emilien Peltier, Margaux Bernard, Marine Trujillo, Duyên Prodhomme, Jean‐Christophe Barbe, Yves Gibon, Philippe Marullo
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12936-019-2826-7

Clinical expression and antigenic profiles of a Plasmodium vivax vaccine candidate: merozoite surface protein 7 (PvMSP-7)
Cited by: 7
Author(s): Chew Weng Cheng, Somchai Jongwutiwes, Chaturong Putaporntip, Andrew P. Jackson
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0252628

Serological profiles of pan-coronavirus-specific responses in COVID-19 patients using a multiplexed electro-chemiluminescence-based testing platform
Cited by: 10
Author(s): Sidhartha Chaudhury, Jack Hutter, Jessica Bolton, Shilpa Hakre, Evelyn Mose, Amy I Wooten, William O'Connell, Joseph Hudak, Shelly J. Krebs, Janice M. Darden, Jason A. Regules, Clinton K. Murray, Kayvon Modjarrad, Paul T. Scott, Sheila A. Peel, Elke S. Bergmann‐Leitner
Software Mentions: 4
Published: over 3 years ago

10.3389/fgene.2020.598743

A Pan-Cancer Study of Epidermal Growth Factor-Like Domains 6/7/8 as Therapeutic Targets in Cancer
Cited by: 3
Author(s): Shanping Shi, Ting Ma, Yang Xi
Software Mentions: 4
Published: almost 4 years ago

10.3390/ani11020450

In Vitro Assessment of Enteric Methane Emission Potential of Whole-Plant Barley, Oat, Triticale and Wheat
Cited by: 5
Author(s): Isaac A. Aboagye, Christine Rosser, V. S. Baron, K. A. Beauchemin
Software Mentions: 4
Published: almost 4 years ago

10.3389/fmolb.2021.690151

Identification of Arp2/3 Complex Subunits as Prognostic Biomarkers for Hepatocellular Carcinoma
Cited by: 27
Author(s): Shenglan Huang, Dan Li, Lingling Zhuang, Li‐Ying Sun
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0246822

Shade, light, and stream temperature responses to riparian thinning in second-growth redwood forests of northern California
Cited by: 12
Author(s): David A. Roon, Jason B. Dunham, Jeremiah D. Groom
Software Mentions: 4
Published: almost 4 years ago

10.1186/s40644-019-0256-y

Radiogenomic analysis of vascular endothelial growth factor in patients with diffuse gliomas
Cited by: 19
Author(s): Zimin Sun, Yiming Li, Yinyan Wang, Xing Fan, Kaibin Xu, Kai Wang, Shaowu Li, Zhong Zhang, Tao Jiang, Xing Liu
Software Mentions: 4
Published: about 5 years ago

10.21203/rs.3.rs-916427/v1

Functional antibody and T-cell immunity following SARS-CoV-2 infection, including by variants of concern, in patients with cancer: the CAPTURE study
Cited by: 0
Author(s): Annika Fendler, Lewis Au, Scott T.C. Shepherd, Fiona Byrne, Maddalena Cerrone, Laura Amanda Boos, Karolina Rzeniewicz, William Gordon, Benjamin Shum, Camille L. Gérard, Barry Ward, Wenyi Xie, Andreas M. Schmitt, Nalinie Joharatnam‐Hogan, Georgina H. Cornish, Martin Pulé, Leila Mekkaoui, Kevin W. Ng, Eleanor Carlyle, Kim Edmonds, Lyra Del Rosario, Sarah Sarker, Karla Lingard, Mary Mangwende, Lucy Holt, Hamid Ahmod, Richard Stone, Camila Gomes, Helen Flynn, Ana Água-Doce, Philip Hobson, Simon Caidan, Michael Howell, Mary Wu, Robert Goldstone, Margaret Crawford, Laura Cubitt, Harshil Patel, Mike Gavrielides, Emma Nye, Ambrosius P. Snijders, James I. MacRae, Jérôme Nicod, Firza Alexander Gronthoud, Robyn Shea, Christina Messiou, David Cunningham, Ian Chau, Naureen Starling, Nicholas Turner, Liam Welsh, Nicholas van As, Robin L. Jones, Joanne Droney, Susana Banerjee, Kate Tatham, Shaman Jhanji, Mary O’Brien, Olivia Curtis, Kevin J. Harrington, Shreerang A. Bhide, Jessica Bazin, Anna Robinson, Clemency Stephenson, Tim Slattery, Yasir Khan, Zayd Tippu, Isla Leslie, Spyridon Gennatas, Alicia Okines, Alison Reid, Kate Young, Andrew J.S. Furness, Lisa Pickering, Sonia Gandhi, Steve Gamblin, Charles Swanton, Emma Nicholson, Sacheen Kumar, Nadia Yousaf, Katalin A. Wilkinson, Anthony J. Swerdlow, Ruth Harvey, George Kassiotis, James Larkin, Robert J. Wilkinson, Samra Turajlic
Software Mentions: 4
Published: about 3 years ago

10.1186/s12864-019-5669-2

Elevated temperatures cause loss of seed set in common bean (Phaseolus vulgaris L.) potentially through the disruption of source-sink relationships
Cited by: 39
Author(s): Afshin Soltani, Sarathi M. Weraduwage, Thomas D. Sharkey, David B. Lowry
Software Mentions: 4
Published: over 5 years ago

10.1186/s12935-020-01238-3

Identification of a m6A RNA methylation regulators-based signature for predicting the prognosis of clear cell renal carcinoma
Cited by: 34
Author(s): Jing Chen, Kun Yu, Guansheng Zhong, Wei Shen
Software Mentions: 4
Published: over 4 years ago

10.1007/s11302-020-09711-4

High expression levels of pyrimidine metabolic rate–limiting enzymes are adverse prognostic factors in lung adenocarcinoma: a study based on The Cancer Genome Atlas and Gene Expression Omnibus datasets
Cited by: 37
Author(s): Haiwei Wang, Xinrui Wang, Liangpu Xu, Ji Zhang, Hua Cao
Software Mentions: 4
Published: over 4 years ago

10.1186/s12935-021-02090-9

The functions and prognostic values of m6A RNA methylation regulators in thyroid carcinoma
Cited by: 8
Author(s): Zuwei Yu, Shao-Ting Feng, Di Zhang, Xuchen Cao, Yue Yu, Xin Wang
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2018.02494

Altered Gut Microbiota and Compositional Changes in Firmicutes and Proteobacteria in Mexican Undernourished and Obese Children
Cited by: 90
Author(s): Eder Orlando Méndez-Salazar, Marı́a Guadalupe Ortiz-López, Marı́a de los Ángeles Granados-Silvestre, Berenice Palacios‐González, Mészáros Márta
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0204279

Multiple genomic regions influence root morphology and seedling growth in cultivated sunflower (Helianthus annuus L.) under well-watered and water-limited conditions
Cited by: 19
Author(s): Rishi R. Masalia, Andries A. Temme, Nicole de leon Torralba, John M. Burke
Software Mentions: 4
Published: about 6 years ago

10.1186/s12935-021-01928-6

Construction of a prognostic model with histone modification-related genes and identification of potential drugs in pancreatic cancer
Cited by: 8
Author(s): Chen Yuan, Ruiyuan Xu, Rexiati Ruze, Jinshou Yang, Huanyu Wang, Jianlu Song, Lei You, Yuming Wang, Yupei Zhao
Software Mentions: 4
Published: over 3 years ago

10.18632/aging.202686

An immunoscore nomogram for predicting survival in patients with oesophageal cancer
Cited by: 0
Author(s): Gaoming Li, Qifan Song, Angsong Cai, Zeliang Wei, Rui Zhang, Dali Yi, Jia Chen, Fang Li, Yanqi Zhang, Ling Liu, Yazhou Wu, Dong Yi
Software Mentions: 4
Published: over 3 years ago

10.1590/1414-431X2021e11372

Profiles of immune infiltration in abdominal aortic aneurysm and their associated marker genes: a gene expression-based study
Cited by: 5
Author(s): Tan Li, Tianlong Wang, Xin Zhao
Software Mentions: 4
Published: almost 4 years ago

10.3390/brainsci11010094

Assessing the Relationship between Verbal and Nonverbal Cognitive Abilities Using Resting-State EEG Functional Connectivity
Cited by: 1
Author(s): Inna Feklicheva, Ilya Zakharov, Nadezda Chipeeva, Ekaterina Maslennikova, Svetlana Korobova, Timofey Adamovich, Victoria Ismatullina, Sergey Malykh
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0047879

Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities
Cited by: 281
Author(s): Sandra Kittelmann, Henning Seedorf, William A. Walters, José C. Clemente, Rob Knight, Jeffrey I. Gordon, Peter H. Janssen
Software Mentions: 4
Published: almost 12 years ago

10.1186/s40104-021-00617-8

Effects of supplemental xylanase and xylooligosaccharides on production performance and gut health variables of broiler chickens
Cited by: 27
Author(s): Amit Kumar Singh, Birendra Mishra, M.R. Bedford
Software Mentions: 4
Published: about 3 years ago

10.1038/s41438-021-00502-5

Strawberry sweetness and consumer preference are enhanced by specific volatile compounds
Cited by: 41
Author(s): Zhen Fan, Tomas Hasing, Timothy S. Johnson, Drake M. Garner, Michael L. Schwieterman, Christopher R. Barbey, Thomas A. Colquhoun, Charles A. Sims, M. D. V. de Resende, Vance M. Whitaker
Software Mentions: 4
Published: over 3 years ago

10.1186/s13068-020-01776-y

Biomethanation processes: new insights on the effect of a high H2 partial pressure on microbial communities
Cited by: 38
Author(s): Lucia Braga Nan, Éric Trably, Gaëlle Santa-Catalina, Nicolas Bernet, Jean-Philippe Delgenès, Renaud Escudié
Software Mentions: 4
Published: over 4 years ago

10.1038/s41438-020-00411-z

Genetic dissection of climacteric fruit ripening in a melon population segregating for ripening behavior
Cited by: 27
Author(s): Lara Pereira, Miguel Santo Domingo, Valentino Ruggieri, Jason Argyris, Michael A. Phillips, Guangwei Zhao, Qiang Lian, Yong Xu, Yue He, Sanwen Huang, Marta Pujol, Jordi García-Más
Software Mentions: 4
Published: about 4 years ago

10.3389/fcimb.2020.00485

Gut Microbiota-Metabolome Changes in Children With Diarrhea by Diarrheagenic E. coli
Cited by: 16
Author(s): Pablo Gallardo, Mariana Izquierdo, Roberto Vidal, Francisco Soto, Juan C. Ossa, Mauricio J. Farfán
Software Mentions: 4
Published: about 4 years ago

Projects: cran: corrplot

Papers Mentioning corrplot 1,077