Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: clusterRepro

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/clusterRepro

Reproducibility of Gene Expression Clusters
3 versions
Latest release: almost 6 years ago
270 downloads last month

Papers Mentioning clusterRepro 13

10.3389/fonc.2021.619242

The Identification and Validation of Two Heterogenous Subtypes and a Risk Signature Based on Ferroptosis in Hepatocellular Carcinoma
Cited by: 40
Author(s): Xinwei Han, Libo Wang, Long Liu, Taoyuan Lu, Dechao Jiao, Yuling Sun, Xinwei Han
Software Mentions: 9
Published: over 3 years ago

10.1186/s12967-021-03076-x

A novel immune subtype classification of ER-positive, PR-negative and HER2-negative breast cancer based on the genomic and transcriptomic landscape
Cited by: 4
Author(s): Peiling Xie, Rui An, Shibo Yu, Jing He, Huimin Zhang
Software Mentions: 8
Published: almost 3 years ago

10.3389/fcell.2021.622198

Succinylation Regulators Promote Clear Cell Renal Cell Carcinoma by Immune Regulation and RNA N6-Methyladenosine Methylation
Cited by: 11
Author(s): Wenqing Lü, Xiaofang Che, Xiujuan Qu, Chunlei Zheng, Xianghong Yang, Bowen Bao, Zhi Li, Duo Wang, Yue Jin, Yizhe Wang, Jiawen Xiao, Jianfei Qi, Yunpeng Liu
Software Mentions: 7
Published: over 3 years ago

10.3389/fcell.2020.576996

Development and Validation of a Novel DNA Methylation-Driven Gene Based Molecular Classification and Predictive Model for Overall Survival and Immunotherapy Response in Patients With Glioblastoma: A Multiomic Analysis
Cited by: 9
Author(s): Zihao Wang, Lu Gao, Xiaopeng Guo, Wei Lian, Kan Deng, Bing Xing
Software Mentions: 7
Published: about 4 years ago

10.1002/1878-0261.12707

Classification of diffuse lower‐grade glioma based on immunological profiling
Cited by: 40
Author(s): Fan Wu, Zhiliang Wang, Kuan‐Yu Wang, Guanzhang Li, Rui‐Chao Chai, Yuqing Liu, Haiyan Jiang, You Zhai, Yuemei Feng, Zheng Zhao, Wei Zhang
Software Mentions: 6
Published: over 4 years ago

10.18632/aging.103626

A novel hypoxic tumor microenvironment signature for predicting the survival, progression, immune responsiveness and chemoresistance of glioblastoma: a multi-omic study
Cited by: 6
Author(s): Zihao Wang, Lu Gao, Xiaopeng Guo, Yaning Wang, Yu Wang, Wenbin Ma, Yi Guo, Bing Xing
Software Mentions: 6
Published: about 4 years ago

10.3389/fpsyt.2021.716722

Transcriptomics Analysis Reveals Shared Pathways in Peripheral Blood Mononuclear Cells and Brain Tissues of Patients With Schizophrenia
Cited by: 6
Author(s): Xuemian Song, Yiyun Liu, Juncai Pu, Siwen Gui, Xiaogang Zhong, Xiaopeng Chen, Weiyi Chen, Xiang Chen, Yue Chen, Haiyang Wang, Ke Cheng, Libo Zhao, Peng Xie
Software Mentions: 6
Published: almost 3 years ago

10.1371/journal.pone.0103514

Identification of a Novel Luminal Molecular Subtype of Breast Cancer
Cited by: 14
Author(s): Anna Dvorkin‐Gheva, John A. Hassell
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pone.0243857

Network preservation reveals shared and unique biological processes associated with chronic alcohol abuse in NAc and PFC
Cited by: 7
Author(s): Eric Vornholt, John W. Drake, Mohammed Mamdani, Gowon O. McMichael, Zachary N. Taylor, Silviu‐Alin Bacanu, Michael F. Miles, Vladimir I. Vladimirov
Software Mentions: 5
Published: almost 4 years ago

10.3389/fimmu.2021.685992

The Immune Subtypes and Landscape of Gastric Cancer and to Predict Based on the Whole-Slide Images Using Deep Learning
Cited by: 28
Author(s): Yan Chen, Zhiwei Sun, Wanlan Chen, Changyan Liu, Ruoyang Chai, Jingjing Ding, Wen Liu, Xianzhen Feng, Jun Zhou, Xiaoyi Shen, Shan Huang, Zhongqing Xu
Software Mentions: 4
Published: about 3 years ago