cran: boot | Projects | Ecosyste.ms: Papers

10.1186/s12864-016-3387-6

HiC-bench: comprehensive and reproducible Hi-C data analysis designed for parameter exploration and benchmarking
Cited by: 64
Author(s): Charalampos Lazaris, Stephen M. Kelly, Panagiotis Ntziachristos, Iannis Aifantis, Aristotelis Tsirigos
Software Mentions: 28
Published: almost 8 years ago

10.1111/joa.13366

Selection on vocal output affects laryngeal morphology in rats
Cited by: 6
Author(s): Raffaela Lesch, Thomas Schwaha, Andrea Orozco, Margaret Shilling, Susan A. Brunelli, Myron A. Hofer, Daniel L. Bowling, Betty Zimmerberg, W. Tecumseh Fitch
Software Mentions: 25
Published: almost 4 years ago

10.1098/rsos.202050

Experiments confirm a dispersive phenotype associated with a natural gene drive system
Cited by: 7
Author(s): Jan‐Niklas Runge, Anna K. Lindholm
Software Mentions: 19
Published: over 3 years ago

10.3389/fimmu.2020.565730

Class I HLA Allele Predicted Restricted Antigenic Coverages for Spike and Nucleocapsid Proteins Are Associated With Deaths Related to COVID-19
Cited by: 22
Author(s): Marco Antônio M. Pretti, Rômulo Gonçalves Galvani, Gustavo Fioravanti Vieira, Adriana Bonomo, Martín Bonamino, Mariana Boroni
Software Mentions: 17
Published: almost 4 years ago

10.1186/1472-6947-13-126

Evaluation of prediction models for the staging of prostate cancer
Cited by: 19
Author(s): Susie Boyce, Yue Fan, R. William G. Watson, Brendan Murphy
Software Mentions: 16
Published: about 11 years ago

10.7554/eLife.61812

Reproducible analysis of disease space via principal components using the novel R package syndRomics
Cited by: 18
Author(s): Abel Torres-Espín, Austin Chou, J. Russell Huie, Nikos Kyritsis, Pavan S. Upadhyayula, Adam R. Ferguson
Software Mentions: 16
Published: almost 4 years ago

10.3389/fpsyg.2021.727737

Psychological Balance Scale: Validation Studies of an Integrative Measure of Well-Being
Cited by: 7
Author(s): Anastasia Besika, Andrea B. Horn, Mike Martin
Software Mentions: 16
Published: about 3 years ago

10.1186/s12882-021-02267-4

Low plasma magnesium concentration and future abdominal aortic calcifications in moderate chronic kidney disease
Cited by: 2
Author(s): Anique D. ter Braake, Larissa P. Govers, Mieke J. Peeters, Arjan D. van Zuilen, Jack F.M. Wetzels, Peter J. Blankenstijn, Joost G. J. Hoenderop, Jeroen H. F. de Baaij, Jan van den Brand
Software Mentions: 15
Published: over 3 years ago

10.1371/journal.pone.0249268

Outdoor cycling activity affected by COVID-19 related epidemic-control-decisions
Cited by: 38
Author(s): Anne-Maria Schweizer, Anna Leiderer, Veronika Mitterwallner, Anna Walentowitz, Gregor Mathes, Manuel J. Steinbauer
Software Mentions: 14
Published: over 3 years ago

10.1371/journal.pgen.1006111

Genetic Drift, Purifying Selection and Vector Genotype Shape Dengue Virus Intra-host Genetic Diversity in Mosquitoes
Cited by: 109
Author(s): Sébastian Lequime, Albin Fontaine, Meriadeg Ar Gouilh, Isabelle Moltini-Conclois, Louis Lambrechts
Software Mentions: 12
Published: over 8 years ago

10.3390/jfmk6020036

Predicting Adaptations to Resistance Training Plus Overfeeding Using Bayesian Regression: A Preliminary Investigation
Cited by: 4
Author(s): R. Scott Smith, Patrick S. Harty, Matthew T. Stratton, Zad Rafi, Christian Rodriguez, Jacob R. Dellinger, Marqui L. Benavides, Baylor A Johnson, Sarah J. White, Abegale D Williams, Grant M. Tinsley
Software Mentions: 11
Published: over 3 years ago

10.1186/s12864-015-2250-5

Leveraging global gene expression patterns to predict expression of unmeasured genes
Cited by: 3
Author(s): James Rudd, René A. Zelaya, Eugene Demidenko, Ellen L. Goode, Casey S. Greene, Jennifer A. Doherty
Software Mentions: 10
Published: almost 9 years ago

10.3389/fonc.2021.671171

Development of a Prognostic Scoring System for Hepatocellular Carcinoma Patients With Main Portal Vein Tumor Thrombus Undergoing Conventional Transarterial Chemoembolization: An Analysis of 173 Patients
Cited by: 3
Author(s): Jinghuan Li, Xin Yin, Fan Yan Wei, Lan Zhang, Rongxin Chen, Yi Chen, Lixin Li, Ning Ge, Yuhong Gan, Yanhong Wang, Zhigang Ren
Software Mentions: 10
Published: about 3 years ago

10.1371/journal.pone.0134679

Prediction of Peptide and Protein Propensity for Amyloid Formation
Cited by: 50
Author(s): Carlos Família, Sarah Rachel Dennison, Alexandre Quintas, David A. Phoenix
Software Mentions: 10
Published: over 9 years ago

10.3390/ijerph17218164

Differences in the Estimation of Wildfire-Associated Air Pollution by Satellite Mapping of Smoke Plumes and Ground-Level Monitoring
Cited by: 9
Author(s): Raj P. Fadadu, John R. Balmes, Stephanie M. Holm
Software Mentions: 10
Published: about 4 years ago

10.1371/journal.pone.0249765

Having versus not having social interactions in patients diagnosed with depression or social phobia and controls
Cited by: 0
Author(s): Jeanette Villanueva, Andrea Meyer, Thorsten Mikoteit, Jürgen Hoyer, Christian Imboden, Klaus Bader, Martin Hatzinger, Roselind Lieb, Andrew T. Gloster
Software Mentions: 9
Published: over 3 years ago

10.3389/fonc.2020.578895

Radiomics Feature Activation Maps as a New Tool for Signature Interpretability
Cited by: 17
Author(s): Diem Vuong, Stephanie Tanadini‐Lang, Ze Wu, Robert J. Marks, Jan Unkelbach, Sven Hillinger, Eric Innocents Eboulet, Sandra Thierstein, Solange Peters, Miklos Pless, Matthias Gückenberger, Marta Bogowicz
Software Mentions: 9
Published: almost 4 years ago

10.1371/journal.pmed.1002686

Deep learning for chest radiograph diagnosis: A retrospective comparison of the CheXNeXt algorithm to practicing radiologists
Cited by: 755
Author(s): Pranav Rajpurkar, Jeremy Irvin, Robyn L. Ball, Kaylie Zhu, Brandon Yang, Hershel Mehta, Tony Duan, Daisy Yi Ding, Aarti Bagul, Curtis P. Langlotz, Bhavik N. Patel, Kristen W. Yeom, Katie Shpanskaya, Francis G. Blankenberg, Jayne Seekins, Timothy J. Amrhein, David A. Mong, Safwan Halabi, Evan J. Zucker, Andrew Y. Ng, Matthew P. Lungren
Software Mentions: 9
Published: about 6 years ago

10.3389/fpsyg.2021.581681

Cognitive Motivation as a Resource for Affective Adjustment and Mental Health
Cited by: 2
Author(s): Alexander Strobel, Aniko Farkas, Jürgen Hoyer, Ursula Melicherova, Volker Köllner, Anja Strobel
Software Mentions: 9
Published: about 3 years ago

10.1371/journal.pone.0204877

Rare haplotype load as marker for lethal mutagenesis
Cited by: 7
Author(s): Josep Gregori, María Eugenia Soria, Isabel Gallego, Mercedes Guerrero-Murillo, Juan Ignacio Esteban, Josep Quer, Celia Perales, Esteban Domingo
Software Mentions: 9
Published: about 6 years ago

10.1186/s13550-021-00809-3

Preselection of robust radiomic features does not improve outcome modelling in non-small cell lung cancer based on clinical routine FDG-PET imaging
Cited by: 7
Author(s): Carol Oliveira, Florian Amstutz, Diem Vuong, Marta Bogowicz, Martin Hüllner, R. E. Forster, Lucas Basler, Christina Schröder, Eric Innocents Eboulet, Miklos Pless, Sandra Thierstein, Solange Peters, Sven Hillinger, Stephanie Tanadini‐Lang, Matthias Gückenberger
Software Mentions: 9
Published: over 3 years ago

10.3390/microorganisms8020145

Detection of Specific Antibodies against Toscana Virus among Blood Donors in Northeastern Italy and Correlation with Sand Fly Abundance in 2014
Cited by: 4
Author(s): Silvia Morini, Mattia Calzolari, Giada Rossini, Nadia Pascarelli, Andrea Porcellini, Vanda Randi, Maria Carla Re, Alessandro Albieri, Paolo Bonilauri, Romeo Bellini, Nazlı Ayhan, Rémi N. Charrel, Stefania Varani
Software Mentions: 9
Published: almost 5 years ago

10.1371/journal.pone.0134502

Identifying Shifts in Leaf-Litter Ant Assemblages (Hymenoptera: Formicidae) across Ecosystem Boundaries Using Multiple Sampling Methods
Cited by: 15
Author(s): Michal Wiezik, Marek Svitok, Adela Wieziková, Martin Dovčiak
Software Mentions: 8
Published: over 9 years ago

10.1186/s12955-017-0768-8

Psychometric evaluation of the Oswestry Disability Index in patients with chronic low back pain: factor and Mokken analyses
Cited by: 42
Author(s): Chin-Pang Lee, Tsai-Sheng Fu, Chia-Yih Liu, Ching‐I Hung
Software Mentions: 8
Published: about 7 years ago

10.1186/s12917-015-0593-4

A preliminary study of the effect of closed incision management with negative pressure wound therapy over high-risk incisions
Cited by: 14
Author(s): Karen L Perry, Lynda Rutherford, D. Sajik, Mieghan Bruce
Software Mentions: 8
Published: about 9 years ago

10.1371/journal.pone.0015734

Cross-Scale Analysis of the Region Effect on Vascular Plant Species Diversity in Southern and Northern European Mountain Ranges
Cited by: 57
Author(s): Jonathan Lenoir, Jean‐Claude Gégout, Antoine Guisan, Pascal Vittoz, Thomas Wohlgemuth, Niklaus E. Zimmermann, Stefan Dullinger, Harald Pauli, Wolfgang Willner, John‐Arvid Grytnes, Risto Virtanen, Jens‐Christian Svenning
Software Mentions: 8
Published: almost 14 years ago

10.3389/fimmu.2021.651475

Novel Insights Into Rheumatoid Arthritis Through Characterization of Concordant Changes in DNA Methylation and Gene Expression in Synovial Biopsies of Patients With Differing Numbers of Swollen Joints
Cited by: 5
Author(s): Andrew Y. Li Yim, Enrico Ferrero, Klio Maratou, Huw D. Lewis, George C. Royal, David F. Tough, Chris Larminie, Marcel M.A.M. Mannens, Peter Henneman, Wouter J. de Jonge, Marleen G H van de Sande, Daniëlle M. Gerlag, Rab K. Prinjha, Paul P. Tak
Software Mentions: 7
Published: over 3 years ago

10.1186/s12888-021-03501-x

Validation of case definitions of depression derived from administrative data against the CIDI-SF as reference standard: results from the PROspective Québec (PROQ) study
Cited by: 3
Author(s): Ana Paula Bruno Pena-Gralle, Denis Talbot, Xavier Trudel, Karine Aubé, Alain Lesage, Sophie Lauzier, Alain Milot, Chantal Brisson
Software Mentions: 7
Published: about 3 years ago

10.1007/s00330-020-07195-9

Improved differentiation between primary lung cancer and pulmonary metastasis by combining dual-energy CT–derived biomarkers with conventional CT attenuation
Cited by: 19
Author(s): Dominik Deniffel, Andreas Sauter, Alexander A. Fingerle, Ernst J. Rummeny, Marcus R. Makowski, Daniela Pfeiffer
Software Mentions: 7
Published: about 4 years ago

10.1186/s40635-021-00410-x

Validation of a novel system to assess end-expiratory lung volume and alveolar recruitment in an ARDS model
Cited by: 0
Author(s): Laurent Bitker, Nakédia M. F. Carvalho, Sascha Reidt, Christoph Schranz, Dominik Novotni, Maciej Orkisz, Eduardo Davila Serrano, Jean-Pierre Revelly, Jean-Christophe Richard
Software Mentions: 7
Published: about 3 years ago

10.1371/journal.pone.0136548

Familiar Face Detection in 180ms
Cited by: 47
Author(s): Matteo Visconti di Oleggio Castello, M. Ida Gobbini
Software Mentions: 6
Published: about 9 years ago

10.1186/s12984-020-00717-y

Validity and reliability of an accelerometer-based assessgame to quantify upper limb selective voluntary motor control
Cited by: 8
Author(s): Jeffrey W. Keller, Annina Fahr, Julia Balzer, Jan Lieber, Hubertus J. A. van Hedel
Software Mentions: 6
Published: over 4 years ago

10.1186/s13071-019-3459-y

Mosquito (Diptera: Culicidae) larval ecology in natural habitats in the cold temperate Patagonia region of Argentina
Cited by: 13
Author(s): Marta G. Grech, Luz M. Manzo, Luis B. Epele, Magdalena Laurito, Alfredo Ñ. Claverie, Francisco Ludueña-Almeida, María Laura Miserendino, Walter Ricardo Almirón
Software Mentions: 6
Published: over 5 years ago

10.1186/s12864-019-6110-6

Insight into genetic regulation of miRNA in mouse brain
Cited by: 4
Author(s): Gordon Kordas, Pratyaydipta Rudra, Audrey E. Hendricks, Laura Saba, Katerina Kechris
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-017-17664-9

No Evidence that Knops Blood Group Polymorphisms Affect Complement Receptor 1 Clustering on Erythrocytes
Cited by: 1
Author(s): Olivia Swann, Ewen M Harrison, D. Herbert Opi, Emily Nyatichi, Alex Macharia, Sophie Uyoga, Thomas N. Williams, J. Alexandra Rowe
Software Mentions: 6
Published: almost 7 years ago

10.3390/insects11100669

Validating Morphometrics with DNA Barcoding to Reliably Separate Three Cryptic Species of Bombus Cresson (Hymenoptera: Apidae)
Cited by: 7
Author(s): Joan Milam, Dennis E. Johnson, Jeremy C. Andersen, Aliza Fassler, Desirée L. Narango, Joseph S. Elkinton
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pbio.3001207

Pathogenic missense protein variants affect different functional pathways and proteomic features than healthy population variants
Cited by: 9
Author(s): Anna Laddach, Joseph C.F. Ng, Franca Fraternali
Software Mentions: 6
Published: over 3 years ago

10.1038/srep45371

Frugivore-Mediated Selection in A Habitat Transformation Scenario
Cited by: 15
Author(s): Francisco E. Fontúrbel, Rodrigo Medel
Software Mentions: 6
Published: over 7 years ago

10.1371/journal.pone.0128155

Can Newts Cope with the Heat? Disparate Thermoregulatory Strategies of Two Sympatric Species in Water
Cited by: 26
Author(s): Monika Balogová, Lumı́r Gvoždı́k
Software Mentions: 6
Published: over 9 years ago

10.1371/journal.pone.0229087

Risk factors for loneliness: The high relative importance of age versus other factors
Cited by: 59
Author(s): Bridget Shovestul, Han Jian-guo, Laura Germine, David Dodell-Feder
Software Mentions: 6
Published: almost 5 years ago

10.3389/fpls.2019.01757

Natural Selection Towards Wild-Type in Composite Cross Populations of Winter Wheat
Cited by: 13
Author(s): Samuel Knapp, Thomas Döring, Hannah Jones, J. W. Snape, Luzie U. Wingen, Martin S. Wolfe, Michelle Leverington-Waite, Simon Griffiths
Software Mentions: 6
Published: over 4 years ago

10.1007/s00277-017-3003-0

Influence of body mass index on survival in indolent and mantle cell lymphomas: analysis of the StiL NHL1 trial
Cited by: 6
Author(s): Lukas Weiß, Thomas Melchardt, Alexander Egle, Georg Hopfinger, Hubert Hackl, Richard Greil, Juergen Barth, Mathias Rummel
Software Mentions: 6
Published: over 7 years ago

10.1007/s00330-018-5578-9

Follow-up infarct volume as a mediator of endovascular treatment effect on functional outcome in ischaemic stroke
Cited by: 17
Author(s): Kars C.J. Compagne, Anna M. M. Boers, Henk A. Marquering, Olvert A. Berkhemer, Albert J. Yoo, Ludo F. M. Beenen, Robert J. van Oostenbrugge, Wim H van Zwam, Y. B. W. E. M. Roos, Charles B. L. M. Majoie, Adriaan C.G.M. van Es, Aad van der Lugt, Diederik W.J. Dippel, Hester F. Lingsma, Clean Registry Investigators
Software Mentions: 5
Published: over 6 years ago

10.3389/fimmu.2020.00452

Influenza-Induced Interferon Lambda Response Is Associated With Longer Time to Delivery Among Pregnant Kenyan Women
Cited by: 1
Author(s): Christof Seiler, Nicholas Bayless, Rosemary Vergara, Jillian Pintye, John Kinuthia, Lusi Osborn, Daniel Matemo, Barbra A. Richardson, Grace John‐Stewart, Susan Holmes, Catherine A. Blish
Software Mentions: 5
Published: over 4 years ago

10.1038/s41598-018-32111-z

Plant growth-promoting rhizobacteria promote plant size inequality
Cited by: 23
Author(s): Alan C. Gange, Kiran R. Gadhave
Software Mentions: 5
Published: about 6 years ago

10.3389/fmicb.2021.636405

Impact of Rocky Desertification Control on Soil Bacterial Community in Karst Graben Basin, Southwestern China
Cited by: 15
Author(s): Qiang Liu, Ang Song, Hui Yang, Wernér E.G. Müller
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0217134

Methodological management of end-of-life decision data in intensive care studies: A systematic review of 178 randomized control trials published in seven major journals
Cited by: 2
Author(s): Sébastien Kerever, Alice Jacquens, Violaine Smail‐Faugeron, Étienne Gayat, Matthieu Resche‐Rigon
Software Mentions: 5
Published: over 5 years ago

10.1186/s13643-019-1032-6

Individual participant data (IPD)-level meta-analysis of randomised controlled trials among dark-skinned populations to estimate the dietary requirement for vitamin D
Cited by: 3
Author(s): Kevin D. Cashman, Christian Ritz
Software Mentions: 5
Published: over 5 years ago

10.3389/fneur.2016.00238

A Review of the Segmental Diameter of the Healthy Human Spinal Cord
Cited by: 50
Author(s): Arvid Frostell, Ramil Hakim, Eric Peter Thelin, Per Mattsson, Mikael Svensson
Software Mentions: 5
Published: almost 8 years ago

10.1093/beheco/araa145

Aerial attack strategies of hawks hunting bats, and the adaptive benefits of swarming
Cited by: 7
Author(s): Caroline H. Brighton, Lillias Zusi, Kathryn McGowan, Morgan Kinniry, Laura N. Kloepper, Graham K. Taylor
Software Mentions: 5
Published: over 3 years ago

10.1093/ptj/pzab112

Impact of Upper Extremity Impairment and Trunk Control on Self-Care Independence in Children With Upper Motor Neuron Lesions
Cited by: 3
Author(s): Jeffrey W. Keller, Annina Fahr, Jan Lieber, Julia Balzer, Hubertus J. A. van Hedel
Software Mentions: 5
Published: over 3 years ago

10.1002/ece3.995

Strong selection on mandible and nest features in a carpenter bee that nests in two sympatric host plants
Cited by: 2
Author(s): Luis Flores‐Prado, Carlos F. Pinto, Alejandra Rojas, Francisco E. Fontúrbel
Software Mentions: 5
Published: over 10 years ago

10.12688/wellcomeopenres.15524.3

Heritability of language laterality assessed by functional transcranial Doppler ultrasound: a twin study
Cited by: 5
Author(s): Dorothy V. M. Bishop, Timothy C. Bates
Software Mentions: 5
Published: about 4 years ago

10.1186/s13059-014-0431-1

Genome-driven integrated classification of breast cancer validated in over 7,500 samples
Cited by: 173
Author(s): H. Raza Ali, Oscar M. Rueda, Suet-Feung Chin, Christina Curtis, Mark J. Dunning, Samuel Aparicio, Carlos Caldas
Software Mentions: 5
Published: over 10 years ago

10.1098/rsos.190682

Widespread infection of Areospora rohanae in southern king crab ( Lithodes santolla ) populations across south Chilean Patagonia
Cited by: 2
Author(s): Sara Rodrı́guez, Juan Carlos Uribe, Sergio A. Estay, Mauricio Palacios, Ramona Pinochet, Sylvia Oyarzún, Nelson Valdivia
Software Mentions: 5
Published: about 5 years ago

10.1590/1414-431X20198711

Reproducibility of carotid ultrasound measurements in the Brazilian Longitudinal Study of Adult Health (ELSA-Brasil) at baseline
Cited by: 5
Author(s): Pedro José dos Santos Neto, Eduardo H. Sena-Santos, Danilo Peron Meireles, Itamar S Santos, Paulo A. Lotufo
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0069863

Dynamic Stability of Coral Reefs on the West Australian Coast
Cited by: 37
Author(s): Conrad W. Speed, Russell C. Babcock, Kevin P. Bancroft, L.E. Beckley, Lynda M. Bellchambers, Martial Depczynski, Stuart N. Field, Kim Friedman, James Gilmour, Jean‐Paul A. Hobbs, H. Kobryn, James A. Moore, Christopher D. Nutt, George Shedrawi, Damian P. Thomson, Shaun K. Wilson
Software Mentions: 5
Published: over 11 years ago

10.1186/1741-7007-8-26

Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila
Cited by: 22
Author(s): Carlo G. Artieri, Rama S. Singh
Software Mentions: 5
Published: over 14 years ago

10.15252/emmm.201404874

Non‐invasive prognostic protein biomarker signatures associated with colorectal cancer
Cited by: 42
Author(s): Silvia Šurinová, Lenka Radová, Meena Choi, Josef Srovnal, Hermann Brenner, Olga Vitek, Marián Hajdúch, Ruedi Aebersold
Software Mentions: 5
Published: over 9 years ago

10.1186/s13071-017-2277-3

Evaluation of electric nets as means to sample mosquito vectors host-seeking on humans and primates
Cited by: 16
Author(s): Frances M. Hawkes, Benny Obrain Manin, Sui Han Ng, Stephen J. Torr, Chris Drakeley, Tock Hing Chua, Heather M. Ferguson
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0215050

Does social context impact metacognition? Evidence from stereotype threat in a visual search task
Cited by: 5
Author(s): Thibault Gajdos, Isabelle Régner, Pascal Huguet, Marine Hainguerlot, J.M. Vergnaud, Jérôme Sackur, Vincent de Gardelle
Software Mentions: 5
Published: over 5 years ago

10.1289/ehp.0901007

Bootstrap-after-Bootstrap Model Averaging for Reducing Model Uncertainty in Model Selection for Air Pollution Mortality Studies
Cited by: 15
Author(s): Steven Roberts, Michael A. Martin
Software Mentions: 5
Published: almost 15 years ago

10.3389/fpls.2016.00779

Root Foraging Performance and Life-History Traits
Cited by: 26
Author(s): Martin Weiser, Tomáš Koubek, Tomáš Herben
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0231840

Commercial integrated crop-livestock systems achieve comparable crop yields to specialized production systems: A meta-analysis
Cited by: 37
Author(s): Caitlin A. Peterson, Leonardo Deiss, Amélie C. M. Gaudin
Software Mentions: 4
Published: over 4 years ago

10.3389/fonc.2020.01335

A Novel Prognostic Scoring System Integrating Gene Expressions and Clinicopathological Characteristics to Predict Very Early Relapse in Node-Negative Estrogen Receptor-Positive/HER2-Negative Breast Cancer
Cited by: 2
Author(s): Caijin Lin, Jiayi Wu, Lin Lin, Xiaochun Fei, Xiaosong Chen, Ou Huang, Jianxing He, Weiguo Chen, Yafen Li, Kunwei Shen, Li Zhu
Software Mentions: 4
Published: about 4 years ago

10.1167/iovs.61.4.35

Parsimonious Models for Predicting Mortality from Choroidal Melanoma
Cited by: 11
Author(s): Bertil Damato, A. Eleuteri, Rumana Hussain, Helen Kalirai, Sophie Thornton, Azzam Taktak, Heinrich Heimann, Sarah E. Coupland
Software Mentions: 4
Published: over 4 years ago

10.3389/fvets.2019.00481

Infectious Salmon Anemia and Farm-Level Culling Strategies
Cited by: 8
Author(s): Lars Qviller, Anja Bråthen Kristoffersen, Trude Marie Lyngstad, Atle Lillehaug
Software Mentions: 4
Published: almost 5 years ago

10.1534/g3.120.401578

Low Base-Substitution Mutation Rate but High Rate of Slippage Mutations in the Sequence Repeat-Rich Genome of <i>Dictyostelium discoideum</i>
Cited by: 8
Author(s): Sibel Küçükyıldırım, Megan G Behringer, Way Sung, Debra A. Brock, Thomas G. Doak, Hatıce Mergen, David C. Queller, Joan E. Strassmann, Michael Lynch
Software Mentions: 4
Published: about 4 years ago

10.1186/s12877-018-0834-z

Item distribution and inter-rater reliability of the German version of the quality of life in Alzheimer’s disease scale (QoL-AD) proxy for people with dementia living in nursing homes
Cited by: 13
Author(s): Martin N. Dichter, Eva-Maria Wolschon, Christian Schwab, Gabriele Meyer, Sascha Köpke
Software Mentions: 4
Published: over 6 years ago

10.3390/jcm9082384

Skin Phototype Could Be a Risk Factor for Multiple Sclerosis
Cited by: 0
Author(s): Isaac Hurtado-Guerrero, Isaac Hurtado-Guerrero, Miguel Ángel Hernández, Begoña Oliver-Martos, Celia Oreja‐Guevara, Jesús Ortega-Pinazo, Ana Alonso, Francisco Javier Barón-López, Laura Leyva, Óscar Fernández, María Jesús Pinto-Medel
Software Mentions: 4
Published: over 4 years ago

10.1007/s00167-016-4204-0

Tunnel widening in single- versus double-bundle anterior cruciate ligament reconstructed knees
Cited by: 40
Author(s): Cathrine Aga, Katharine J. Wilson, Steinar Johansen, Grant J. Dornan, Robert F. La Prade, Lars Engebretsen
Software Mentions: 4
Published: over 8 years ago

10.1186/s12891-018-2287-0

Intra and interrater reliability and clinical feasibility of a simple measure of cervical movement sense in patients with neck pain
Cited by: 17
Author(s): Isabelle M. Werner, Markus Ernst, Julia Treleaven, Rebecca Crawford
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0187500

The prognostic value of CT radiomic features for patients with pulmonary adenocarcinoma treated with EGFR tyrosine kinase inhibitors
Cited by: 23
Author(s): Hyungjin Kim, Chang Min Park, Bhumsuk Keam, Sang Joon Park, Mi So Kim, Tae Min Kim, Dong-Wan Kim, Dae Seog Heo, Jin Mo Goo
Software Mentions: 4
Published: about 7 years ago

10.7150/thno.45989

LncRNA CSMD1-1 promotes the progression of Hepatocellular Carcinoma by activating MYC signaling
Cited by: 22
Author(s): Ji Liu, Rui Xu, Shi-Juan Mai, Yu‐Shui Ma, Mei‐Yin Zhang, Ping‐Sheng Cao, Nuoqing Weng, Ruiqi Wang, Di Cao, Wei Wei, Rong Guo, Yaojun Zhang, Li Xu, Minshan Chen, Huizhong Zhang, Long Huang, Da Fu, Huiyun Wang
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0147924

Semantic Factors Predict the Rate of Lexical Replacement of Content Words
Cited by: 23
Author(s): Susanne Vejdemo, Thomas Hörberg
Software Mentions: 4
Published: almost 9 years ago

10.3390/s20113031

Performance of a Low-Cost Sensor Community Air Monitoring Network in Imperial County, CA
Cited by: 8
Author(s): Paul English, Heather K. Amato, Esther Bejarano, Graeme Carvlin, Humberto Lugo, Michael Jerrett, Galatea King, Daniel Madrigal, Dan Meltzer, Amanda Northcross, Luis José Imedio Olmedo, Edmund Seto, Christian Torres, A. S. Wilkie, Michelle Wong
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-021-91791-2

Variable immunodeficiency score upfront analytical link (VISUAL), a proposal for combined prognostic score at diagnosis of common variable immunodeficiency
Cited by: 1
Author(s): Kissy Guevara-Hoyer, Adolfo Jiménez‐Huete, Júlia Vasconcelos, Esmeralda Neves, Silvia Sánchez-Ramón
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0250099

Social dominance and multiple dimensions of psychopathology: An experimental test of reactivity to leadership and subordinate roles
Cited by: 1
Author(s): Sheri L. Johnson, Benjamin A. Swerdlow, Jordan A. Tharp, Serena Chen, Jennifer L. Tackett, Jamie M. Zeitzer
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0196742

Optimizing biomass estimates of savanna woodland at different spatial scales in the Brazilian Cerrado: Re-evaluating allometric equations and environmental influences
Cited by: 23
Author(s): Isaac Roitman, Mercedes M. C. Bustamante, Ricardo Flores Haidar, Julia Shimbo, Guilherme C. Abdala, George Eiten, Christopher William Fagg, Maria Cristina Felfili, Jeanine Maria Felfili, Tamiel Khan Baiocchi Jacobson, Galiana S. Lindoso, Michael Keller, Eddie Lenza, Sabrina do Couto de Miranda, José Roberto Rodrigues Pinto, Ariane de Almeida Rodrigues, Wellington Braz Carvalho Delitti, Pedro Roitman, Jhames Matos Sampaio
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0058245

Genetic Predisposition to Pass the Standard SICCT Test for Bovine Tuberculosis in British Cattle
Cited by: 20
Author(s): William Amos, Ellen Brooks-Pollock, Ruth Blackwell, Erin E. Driscoll, Martha J. Nelson-Flower, Andrew J. K. Conlan
Software Mentions: 4
Published: over 11 years ago

10.1038/s41598-020-77275-9

COVID-19 predictability in the United States using Google Trends time series
Cited by: 75
Author(s): Amaryllis Mavragani, Κωνσταντίνος Γκίλλας
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0105682

A Semi-Automated Technique Determining the Liver Standardized Uptake Value Reference for Tumor Delineation in FDG PET-CT
Cited by: 70
Author(s): Kenji Hirata, Kentaro Kobayashi, Koon-Pong Wong, Osamu Manabe, Andrew Surmak, Nagara Tamaki, Sung‐Cheng Huang
Software Mentions: 4
Published: about 10 years ago

10.1371/journal.pone.0076070

Lineage-Specific Responses of Tooth Shape in Murine Rodents (Murinae, Rodentia) to Late Miocene Dietary Change in the Siwaliks of Pakistan
Cited by: 24
Author(s): Yuri Kimura, Louis L. Jacobs, Lawrence J. Flynn
Software Mentions: 4
Published: about 11 years ago

10.1371/journal.pone.0131333

Speeding Up Non-Parametric Bootstrap Computations for Statistics Based on Sample Moments in Small/Moderate Sample Size Applications
Cited by: 2
Author(s): Elias Chaibub Neto
Software Mentions: 4
Published: over 9 years ago

10.3390/diagnostics11010054

An Extension of the Bland–Altman Plot for Analyzing the Agreement of More than Two Raters
Cited by: 1
Author(s): Sören Möller, Birgit Debrabant, Ulrich Halekoh, Andreas Kristian Petersen, Oke Gerke
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-020-60071-w

Bluephage, a method for efficient detection of somatic coliphages in one hundred milliliter water samples
Cited by: 8
Author(s): J. Méndez, Daniel Toribio-Avedillo, Raquel Mangas-Casas, Judit Martínez-González
Software Mentions: 4
Published: almost 5 years ago

10.1002/ece3.4975

Developmental and genetic effects on behavioral and life‐history traits in a field cricket
Cited by: 8
Author(s): Tina W. Wey, Denis Réale, Clint D. Kelly
Software Mentions: 4
Published: over 5 years ago

10.1007/s00428-021-03070-0

Histological interpretation of differentiated vulvar intraepithelial neoplasia (dVIN) remains challenging—observations from a bi-national ring-study
Cited by: 11
Author(s): Shatavisha Dasgupta, Elf de Jonge, Mieke Van Bockstal, Luthy S M Wong-Alcala, Suzanne Wilhelmus, Lex A C F Makkus, Katrien Schelfout, Koen K. Van de Vijver, Sander H. J. Smits, Étienne Marbaix, Senada Koljenović, Folkert J. van Kemenade, Patricia C. Ewing‐Graham
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0091783

From Cues to Signals: Evolution of Interspecific Communication via Aposematism and Mimicry in a Predator-Prey System
Cited by: 22
Author(s): Kenna D. S. Lehmann, Brian W. Goldman, Ian Dworkin, David M. Bryson, A. Wagner
Software Mentions: 4
Published: over 10 years ago

10.1038/s41598-018-34858-x

SEPROGADIC – serum protein-based gastric cancer prediction model for prognosis and selection of proper adjuvant therapy
Cited by: 7
Author(s): Hee-Sung Ahn, Tae Sung Sohn, Mi Jeong Kim, Byoung-Kyu Cho, Su Mi Kim, Seung Tae Kim, Eugene C. Yi, Cheolju Lee
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2013.00025

The distribution of thiamin and pyridoxine in the western tropical North Atlantic Amazon River plume
Cited by: 13
Author(s): Laila Pualani Barada, Lynda S. Cutter, Joseph P. Montoya, Eric A. Webb, Douglas G. Capone, Sergio A. Sañudo‐Wilhelmy
Software Mentions: 4
Published: almost 12 years ago

10.1186/s13071-021-04853-9

The seasonal dynamics and biting behavior of potential Anopheles vectors of Plasmodium knowlesi in Palawan, Philippines
Cited by: 2
Author(s): Richard Paul B. Malijan, Frank Mechan, Jessie C. Braganza, Kristelle Mae R. Valle, Ferdinand V. Salazar, Majhalia Torno, Wilfredo E. Aure, Brian Bacay, Fe Esperanza Espino, Stephen J. Torr, Kimberly Fornace, Chris Drakeley, Heather M. Ferguson
Software Mentions: 3
Published: over 3 years ago

10.1117/1.JMI.7.1.014003

External validation of a mammographic texture marker for breast cancer risk in a case–control study
Cited by: 2
Author(s): Christopher Wang, Adam R. Brentnall, James G. Mainprize, Martin J. Yaffe, Jack Cuzick, Jennifer A. Harvey
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0017580

Prevailing Negative Soil Biota Effect and No Evidence for Local Adaptation in a Widespread Eurasian Grass
Cited by: 11
Author(s): Viktória Wagner, Pedro M. Antunes, Michael Ristow, Ute Lechner, Isabell Hensen
Software Mentions: 3
Published: over 13 years ago

10.3390/ijerph18052227

Nature’s Role in Supporting Health during the COVID-19 Pandemic: A Geospatial and Socioecological Study
Cited by: 63
Author(s): Jake M. Robinson, Paul J Brindley, Ross Cameron, Danielle MacCarthy, Anna Jørgensen
Software Mentions: 3
Published: over 3 years ago

10.1186/1471-2288-11-137

A proposed method to investigate reliability throughout a questionnaire
Cited by: 2
Author(s): Tore Wentzel‐Larsen, Tone M. Norekvål, Bjørg Ulvik, Ottar Nygård, Are Hugo Pripp
Software Mentions: 3
Published: about 13 years ago

10.1186/s12874-019-0763-3

Adaptive propensity score procedure improves matching in prospective observational trials
Cited by: 1
Author(s): Dorothea Weber, Lorenz Uhlmann, Silvia Schönenberger, Meinhard Kieser
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0081931

Habitat Hydrology and Geomorphology Control the Distribution of Malaria Vector Larvae in Rural Africa
Cited by: 33
Author(s): Andrew Hardy, Javier G. P. Gamarra, Dónall Eoin Cross, Mark G. Macklin, Mark W. Smith, Japhet Kihonda, Gerry F. Killeen, George N. Ling'ala, Christopher Thomas
Software Mentions: 3
Published: almost 11 years ago

10.1371/journal.pone.0095003

Patterns of DNA Barcode Variation in Canadian Marine Molluscs
Cited by: 117
Author(s): Kara K S Layton, André L. Martel, Paul D. N. Hebert
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0217946

Randomization in survival studies: An evaluation method that takes into account selection and chronological bias
Cited by: 2
Author(s): Marcia Viviane Rückbeil, Ralf‐Dieter Hilgers, Nicole Heussen
Software Mentions: 3
Published: over 5 years ago

Projects: cran: boot

Papers Mentioning boot 143