Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ade4

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ade4

Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
47 versions
Latest release: almost 2 years ago
93 dependent packages
41,735 downloads last month

Papers Mentioning ade4 809

10.1093/molbev/msw124
Mapping Phylogenetic Trees to Reveal Distinct Patterns of Evolution
Cited by: 107
Author(s): Michaela Kendall, Caroline Colijn
Software Mentions: 5
Published: over 8 years ago
10.1186/s12864-020-6746-2
Genetic differentiation and intrinsic genomic features explain variation in recombination hotspots among cocoa tree populations
Cited by: 13
Author(s): Enrique J. Schwarzkopf, Juan Carlos Motamayor, Omar E. Cornejo
Software Mentions: 5
Published: over 4 years ago
10.1128/mBio.03186-19
Fecal Metabolomic Signatures in Colorectal Adenoma Patients Are Associated with Gut Microbiota and Early Events of Colorectal Cancer Pathogenesis
Cited by: 86
Author(s): Minsuk Kim, Emily Vogtmann, David A. Ahlquist, Mary E. Devens, John B. Kisiel, William R. Taylor, Bryan A. White, Vanessa L. Hale, Jaeyun Sung, Nicholas Chia, Rashmi Sinha, Jun Chen
Software Mentions: 5
Published: over 4 years ago
10.3390/ijms19113421
Composition and Genetic Diversity of the Nicotiana tabacum Microbiome in Different Topographic Areas and Growth Periods
Cited by: 14
Author(s): Xiaolong Yuan, Min Cao, Xinmin Liu, Yongmei Du, Guoming Shen, Zhongfeng Zhang, Jinhai Li, Peng Zhang
Software Mentions: 5
Published: about 6 years ago
10.3390/ani10122451
The Native Ant Lasius niger Can Limit the Access to Resources of the Invasive Argentine Ant
Cited by: 6
Author(s): Marion Cordonnier, Olivier Blight, Elena Angulo, Franck Courchamp
Software Mentions: 5
Published: almost 4 years ago
10.1111/mec.13247
High levels of interspecific gene flow in an endemic cichlid fish adaptive radiation from an extreme lake environment
Cited by: 53
Author(s): Antonia G. P. Ford, Kanchon K. Dasmahapatra, Lukas Rüber, Karim Gharbi, Timothée Cézard, Julia J. Day
Software Mentions: 5
Published: over 9 years ago
10.1371/journal.pone.0196987
Diversity and potential activity patterns of planktonic eukaryotic microbes in a mesoeutrophic coastal area (eastern English Channel)
Cited by: 11
Author(s): Sara Rachik, Urania Christaki, Luen Luen Li, Savvas Genitsaris, Elsa Breton, Sébastien Monchy
Software Mentions: 5
Published: over 6 years ago
10.1186/s12864-019-5806-y
From reference genomes to population genomics: comparing three reference-aligned reduced-representation sequencing pipelines in two wildlife species
Cited by: 44
Author(s): Belinda Wright, Katherine A. Farquharson, Elspeth A. McLennan, Katherine Belov, Carolyn J. Hogg, Catherine E. Grueber
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pone.0098536
The Evolution of Morphospace in Phytophagous Scarab Chafers: No Competition - No Divergence?
Cited by: 21
Author(s): Jonas Eberle, Renier Myburgh, Dirk Ahrens
Software Mentions: 5
Published: over 10 years ago
10.1371/journal.pone.0243609
MANTA, an integrative database and analysis platform that relates microbiome and phenotypic data
Cited by: 6
Author(s): Yi An Chen, Jonguk Park, Yayoi Natsume-Kitatani, Hitoshi Kawashima, Attayeb Mohsen, Koji Hosomi, Kumpei Tanisawa, Harumi Ohno, Kana Konishi, Haruka Murakami, Motohiko Miyachi, Jun Kunisawa, Kenji Mizuguchi
Software Mentions: 5
Published: almost 4 years ago
10.3390/microorganisms9061291
Structural and Functional Impacts of Microbiota on Pyropia yezoensis and Surrounding Seawater in Cultivation Farms along Coastal Areas of the Yellow Sea
Cited by: 8
Author(s): Arsalan Ahmed, Anam Khurshid, Xiufeng Tang, Junhao Wang, Tehsin Ullah Khan, Yunxiang Mao
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-021-97556-1
De novo transcriptome assembly, polymorphic SSR markers development and population genetics analyses for southern corn rust (Puccinia polysora)
Cited by: 3
Author(s): Qiuyu Sun, Jie Liu, Keyu Zhang, Chong Huang, Leifu Li, Jiayu Dong, Yong Luo, Zhanhong Ma
Software Mentions: 5
Published: about 3 years ago
10.1038/s41598-021-94258-6
Ecological plasticity to ions concentration determines genetic response and dominance of Anopheles coluzzii larvae in urban coastal habitats of Central Africa
Cited by: 7
Author(s): Neil Michel Longo-Pendy, Billy Téné-Fossog, Robert E. Tawedi, Ousman Akone‐Ella, Céline Toty, Nil Rahola, Jean‐Jacques Braun, Nicolás Berthet, Pierre Kengne, Carlo Costantini, Diégo Ayala
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-021-91962-1
OpiumPlex is a novel microsatellite system for profiling opium poppy (Papaver somniferum L.)
Cited by: 4
Author(s): Jakub Vašek, Daniela Čílová, Martina Melounová, Pavel Svoboda, Kamila Zdeňková, Eliška Čermáková, Jaroslava Ovesná
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0195273
AFLP-based genetic diversity of wild orchardgrass germplasm collections from Central Asia and Western China, and the relation to environmental factors
Cited by: 12
Author(s): Chenglin Zhang, Ming Sun, Xinquan Zhang, Shiyong Chen, Gang Nie, Yan Peng, Linkai Huang, Xiao Ma
Software Mentions: 5
Published: over 6 years ago
10.1186/s40168-017-0334-y
Enrichment of beneficial bacteria in the skin microbiota of bats persisting with white-nose syndrome
Cited by: 144
Author(s): Virginie Lemieux-Labonté, Anouk Simard, Craig K. R. Willis, François‐Joseph Lapointe
Software Mentions: 5
Published: about 7 years ago
10.3389/fcimb.2021.633242
Effects of Smoking on Inflammatory Markers in a Healthy Population as Analyzed via the Gut Microbiota
Cited by: 13
Author(s): Yan Su, Zhonghui Ma, Mengfan Jiao, Youxiang Wang, Ang Li, Shuzhe Ding
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0227169
Effects of land-use change and related pressures on alien and native subsets of island communities
Cited by: 11
Author(s): Katia Sánchez-Ortiz, Kara Taylor, Adriana De Palma, Franz Essl, Wayne Dawson, Holger Kreft, Jan Pergl, Petr Pyšek, Mark van Kleunen, Patrick Weigelt, Andy Purvis
Software Mentions: 5
Published: almost 4 years ago
10.1186/s40168-021-01102-0
Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome
Cited by: 22
Author(s): Shi Huang, Shuaiming Jiang, Dongxue Huo, Celeste Allaband, Mehrbod Estaki, Victor Cantu, Pedro Belda-Ferre, Yoshiki Vázquez-Baeza, Qiyun Zhu, Chenchen Ma, Congfa Li, Amir Zarrinpar, Yang‐Yu Liu, Rob Knight, Jiachao Zhang
Software Mentions: 5
Published: over 3 years ago
10.1038/s41598-020-72511-8
Burn resuscitation strategy influences the gut microbiota-liver axis in swine
Cited by: 11
Author(s): Wayne Muraoka, Jose C. Granados, Belinda I. Gómez, Susannah E. Nicholson, Kevin K. Chung, Jeffrey W. Shupp, James A. Bynum, Michael A. Dubick, David M. Burmeister
Software Mentions: 5
Published: about 4 years ago
10.1038/s41598-020-76978-3
Bio-fertilizer and rotten straw amendments alter the rhizosphere bacterial community and increase oat productivity in a saline–alkaline environment
Cited by: 20
Author(s): Peina Lu, Luke D. Bainard, Bin Ma, Jinghui Liu
Software Mentions: 5
Published: about 4 years ago
10.1371/journal.pone.0130847
Latitudinal Gradient in Otolith Shape among Local Populations of Atlantic Herring (Clupea harengus L.) in Norway
Cited by: 27
Author(s): Lísa Anne Libungan, Aril Slotte, Åse Husebø, Jane Aanestad Godiksen, Snæbjörn Pálsson
Software Mentions: 5
Published: over 9 years ago
10.1002/ece3.7212
Genetic studies of various<i>Prosopis</i>species (Leguminosae, Section<i>Algarobia</i>) co‐occurring in oases of the Atacama Desert (northern Chile)
Cited by: 2
Author(s): Cecilia Bessega, Carolina Luciana Pometti, Renée H. Fortunato, Francisca Greene, Calógero M. Santoro, Virginia McRostie
Software Mentions: 5
Published: almost 4 years ago
10.3390/foods10061431
Synergistic Effects of the Jackfruit Seed Sourced Resistant Starch and Bifidobacterium pseudolongum subsp. globosum on Suppression of Hyperlipidemia in Mice
Cited by: 8
Author(s): Zhen Zeng, Yuanyuan Wang, Yanjun Zhang, Kaining Chen, Haibo Chang, Chenchen Ma, Shuaiming Jiang, Dongxue Huo, Wenjun Liu, Rajesh Jha, Jiachao Zhang
Software Mentions: 5
Published: over 3 years ago
10.1080/19490976.2020.1785252
The gut microbiome stability is altered by probiotic ingestion and improved by the continuous supplementation of galactooligosaccharide
Cited by: 34
Author(s): Chenchen Ma, S. S. Wasti, Shi Huang, Zhen Zeng, Rajeev Mishra, Shuaiming Jiang, Zhengkai You, Yixuan Wu, Haibo Chang, Yuanyuan Wang, Dongxue Huo, Congfa Li, Zhihong Sun, Zheng Sun, Jiachao Zhang
Software Mentions: 5
Published: over 4 years ago
10.1038/s41598-020-69672-x
A footprint of plant eco-geographic adaptation on the composition of the barley rhizosphere bacterial microbiota
Cited by: 39
Author(s): Rodrigo Alegria Terrazas, Katharin Balbirnie-Cumming, Jenny Morris, Pete E. Hedley, Joanne Russell, Eric Paterson, Elizabeth M. Baggs, Eyal Fridman, Davide Bulgarelli
Software Mentions: 5
Published: over 4 years ago
10.3390/toxins11110629
Rapid and Differential Evolution of the Venom Composition of a Parasitoid Wasp Depending on the Host Strain
Cited by: 20
Author(s): Fanny Cavigliasso, Hugo Mathé-Hubert, Laurent Kremmer, Christian Rebuf, Jean‐Luc Gatti, Thibaut Malausa, Dominique Colinet, Marylène Poirié
Software Mentions: 5
Published: about 5 years ago
10.1371/journal.pone.0109291
Systematic Analysis of Blood Cell Transcriptome in End-Stage Chronic Respiratory Diseases
Cited by: 28
Author(s): Julie Chesné, Richard Danger, K. Botturi, Martine Reynaud‐Gaubert, Sacha Mussot, M. Stern, Isabelle Danner-Boucher, Jean‐François Mornex, Christophe Pison, C. Dromer, Romain Kessler, Marcel Dahan, Olivier Brugière, Jérôme Le Pavec, Frédèric Perros, Marc Humbert, Carine Gomez, Sophie Brouard, A. Magnan
Software Mentions: 4
Published: about 10 years ago
10.1371/journal.pone.0196292
Fitting item response unfolding models to Likert-scale data using mirt in R
Cited by: 9
Author(s): Chen Wei Liu, R. Philip Chalmers
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0190094
Wine yeast phenomics: A standardized fermentation method for assessing quantitative traits of Saccharomyces cerevisiae strains in enological conditions
Cited by: 26
Author(s): Emilien Peltier, Margaux Bernard, Marine Trujillo, Duyên Prodhomme, Jean‐Christophe Barbe, Yves Gibon, Philippe Marullo
Software Mentions: 4
Published: almost 7 years ago
10.1002/mbo3.727
Change in the intestinal bacterial community structure associated with environmental microorganisms during the growth of <i>Eriocheir sinensis</i>
Cited by: 25
Author(s): Chenhe Wang, Yanfeng Zhou, Dawei Lv, You Ge, Huan Li, You Yang
Software Mentions: 4
Published: about 6 years ago
10.1038/s41598-017-16007-y
Warming, shading and a moth outbreak reduce tundra carbon sink strength dramatically by changing plant cover and soil microbial activity
Cited by: 31
Author(s): Mathilde Borg Dahl, Anders Priemé, Asker Brejnrod, Peter Brusvang, Magnus Lund, Josephine Nymand, Magnus Kramshøj, H. Ro‐Poulsen, Merian Skouw Haugwitz
Software Mentions: 4
Published: almost 7 years ago
10.1186/1471-2156-11-94
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
Cited by: 3,502
Author(s): Thibaut Jombart, Sébastien Devillard, François Balloux
Software Mentions: 4
Published: almost 15 years ago
10.1371/journal.pone.0042381
Geological Substrates Shape Tree Species and Trait Distributions in African Moist Forests
Cited by: 76
Author(s): Adeline Fayolle, Bettina M. J. Engelbrecht, Vincent Freycon, Frédéric Mortier, Michael Swaine, Maxime Réjou‐Méchain, Jean‐Louis Doucet, Nicolas Fauvet, Guillaume Cornu, Sylvie Gourlet‐Fleury
Software Mentions: 4
Published: over 12 years ago
10.1002/ece3.1994
Morphological and niche divergence of pinyon pines
Cited by: 12
Author(s): Alejandra Ortíz-Medrano, Daniel P. Scantlebury, Alejandra Vázquez‐Lobo, Alicia Mastretta‐Yanes, Daniel Piñero
Software Mentions: 4
Published: over 8 years ago
10.1099/mgen.0.000070
Phylogenetic structure of European Salmonella Enteritidis outbreak correlates with national and international egg distribution network
Cited by: 53
Author(s): Tim Dallman, Thomas Inns, Thibaut Jombart, Philip Ashton, Nicholas J. Loman, Carol Chatt, Ute Messelhaeusser, Wolfgang Rabsch, Sandra Simon, Sergejs Nikisins, Helen Bernard, Simon Le Hello, Nathalie Jourdan da-Silva, Christian Kornschober, Joël Mossong, Peter M. Hawkey, Elizabeth de Pinna, Kathie Grant, Paul Cleary
Software Mentions: 4
Published: about 8 years ago
10.1371/journal.pone.0126084
Bat-Fruit Interactions Are More Specialized in Shaded-Coffee Plantations than in Tropical Mountain Cloud Forest Fragments
Cited by: 16
Author(s): Jesús R. Hernández‐Montero, Romeo A. Saldaña‐Vázquez, Jorge Galindo‐González, Vinicio J. Sosa
Software Mentions: 4
Published: over 9 years ago
10.1002/ece3.5649
Molecular biogeography and host relations of a parasitoid fly
Cited by: 8
Author(s): David A. Gray, Henry D. Kunerth, Marlene Zuk, William H. Cade, Susan L. Balenger
Software Mentions: 4
Published: about 5 years ago
10.1007/s00248-017-1108-6
Co-Variation of Bacterial and Fungal Communities in Different Sorghum Cultivars and Growth Stages is Soil Dependent
Cited by: 44
Author(s): Thiago R. Schlemper, Johannes A. van Veen, Eiko E. Kuramae
Software Mentions: 4
Published: about 7 years ago
10.1002/ece3.5031
Intraspecific and interspecific trait variability in tadpole meta‐communities from the Brazilian Atlantic rainforest
Cited by: 22
Author(s): Mainara Xavier Jordani, Nicolas Mouquet, Lílian Casatti, Marcelo Menin, Denise de Cerqueira Rossa‐Feres, Cécile H. Albert
Software Mentions: 4
Published: over 5 years ago
10.3390/md18020078
Metabolomic Insights into Marine Phytoplankton Diversity
Cited by: 17
Author(s): Rémy Marcellin-Gros, Gwenaël Piganeau, Didier Stien
Software Mentions: 4
Published: almost 5 years ago
10.1038/srep08397
Diversity in gut bacterial community of school-age children in Asia
Cited by: 189
Author(s): Jiro Nakayama, Koichi Watanabe, Jiahui Jiang, Kazunori Matsuda, Shiou Huei Chao, Pri Haryono, Orawan La-ongkham, Martinus Agus Sarwoko, I Nengah Sujaya, Liang Zhao, Kang Ting Chen, Yen Po Chen, Hsueh Hui Chiu, Tomoko Hidaka, Na Huang, Chikako Kiyohara, Takashi Kurakawa, Naoshige Sakamoto, Kenji Sonomoto, Kousuke Tashiro, Hirokazu Tsuji, Ming Ju Chen, Vichai Leelavatcharamas, Chii Cherng Liao, Sunee Nitisinprasert, Endang Sri Rahayu, Fa Zheng Ren, Yao‐Chou Tsai, Yuan Kun Lee
Software Mentions: 4
Published: over 9 years ago
10.1002/ece3.6404
“A cleaner break”: Genetic divergence between geographic groups and sympatric phenotypes revealed in ballan wrasse (<i>Labrus bergylta</i>)
Cited by: 9
Author(s): Gaute Wilhelmsen Seljestad, María Quintela, Ellika Faust, Kim Tallaksen Halvorsen, François Besnier, Eva Jansson, Geir Dahle, Halvor Knutsen, Carl André, Arild Folkvord, Kevin A. Glover
Software Mentions: 4
Published: over 4 years ago
10.1002/ece3.6635
Genetic structuring among colonies of a pantropical seabird: Implication for subspecies validation and conservation
Cited by: 4
Author(s): Laurence Humeau, Matthieu Le Corre, Stuart F. Reynolds, Colin P. Wearn, Janos C. Hennicke, James C. Russell, Yann Gomard, Hélène Magalon, Patrick Pinet, Pauline Gélin, François Xavier Couzi, E. Bemanaja, Vikash Tatayah, Ousseni Bacar, Gérard Rocamora, Patrick Talbot, Nirmal Shah, Leandro Bugoni, Denis Da Silva, A. Jaeger
Software Mentions: 4
Published: about 4 years ago
10.1186/1471-2105-9-289
Stability of gene contributions and identification of outliers in multivariate analysis of microarray data
Cited by: 18
Author(s): Florent Baty, Daniel Jaeger, Frank Preiswerk, M. Schumacher, Martin Brutsche
Software Mentions: 4
Published: over 16 years ago
10.1371/journal.pone.0136018
Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient
Cited by: 14
Author(s): Rodrigo Leonel Lozano Orihuela, Carlos A. Peres, Gabriel Mendes, João André Jarenkow, Marcelo Tabarelli
Software Mentions: 4
Published: about 9 years ago
10.1002/ece3.3313
Do temperate tree species diversity and identity influence soil microbial community function and composition?
Cited by: 56
Author(s): Rim Khlifa, Alain Paquette, Christian Messier, Peter B. Reich, Alison D. Munson
Software Mentions: 4
Published: about 7 years ago
10.1038/srep30115
Genomic content typifying a prevalent clade of bovine mastitis-associated Escherichia coli
Cited by: 39
Author(s): Robert Goldstone, Susan R. Harris, David George Emslie Smith
Software Mentions: 4
Published: over 8 years ago
10.1038/s41598-017-00166-z
Environmental filtering structures tree functional traits combination and lineages across space in tropical tree assemblages
Cited by: 33
Author(s): Mengesha Asefa, Min Cao, Guocheng Zhang, Xiuqin Ci, Jie Li, Jie Yang
Software Mentions: 4
Published: over 7 years ago
10.1371/journal.pone.0177145
Microbiomes associated with infective stages of root-knot and lesion nematodes in soil
Cited by: 74
Author(s): Ahmed Elhady, Ariadna Giné, Olivera Topalović, Samuel Jacquiod, Søren J. Sørensen, Francisco Javier Sorribas, Holger Heuer
Software Mentions: 4
Published: over 7 years ago
10.1186/s12862-017-0885-3
Grandparental immune priming in the pipefish Syngnathus typhle
Cited by: 39
Author(s): Anne Beemelmanns, Olivia Roth
Software Mentions: 4
Published: almost 8 years ago
10.1002/ece3.4305
Lake regionalization and diatom metacommunity structuring in tropical South America
Cited by: 46
Author(s): Xavier Benito, Sherilyn C. Fritz, Miriam Steinitz‐Kannan, María Isabel Álvarez Vélez, Michael M. McGlue
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0162777
Post-Fire Recovery in Coastal Sage Scrub: Seed Rain and Community Trajectory
Cited by: 4
Author(s): Erin Conlisk, Rebecca M. Swab, Alejandra Martínez‐Berdeja, Matthew P. Daugherty
Software Mentions: 4
Published: about 8 years ago
10.1016/j.psj.2021.101181
Cecal microbiome profile of Hawaiian feral chickens and pasture-raised broiler (commercial) chickens determined using 16S rRNA amplicon sequencing
Cited by: 12
Author(s): Sudhir Yadav, Kayla D. Caliboso, Jannel E. Nanquil, Jiachao Zhang, Helmut Kae, Kabi R. Neupane, Birendra Mishra
Software Mentions: 4
Published: over 3 years ago
10.1098/rspb.2020.1070
Phylogenetic and functional distinctiveness explain alien plant population responses to competition
Cited by: 10
Author(s): Sam Levin, Raelene M. Crandall, Tyler Pokoski, Cláudia Stein, Tiffany M. Knight
Software Mentions: 4
Published: over 4 years ago
10.1098/rsos.150497
Parental influence on begging call structure in zebra finches ( <i>Taeniopygia guttata</i> ): evidence of early vocal plasticity
Cited by: 16
Author(s): Avelyne S. Villain, Ingrid C. A. Boucaud, Colette Bouchut, Clémentine Vignal
Software Mentions: 4
Published: about 9 years ago
10.1002/ece3.2924
Sustained functional composition of pollinators in restored pastures despite slow functional restoration of plants
Cited by: 18
Author(s): Marie Winsa, Erik Öckinger, Riccardo Bommarco, Regina Lindborg, Stuart P. M. Roberts, Johanna Wärnsberg, Ignasi Bartomeus
Software Mentions: 4
Published: over 7 years ago
10.1002/ece3.5798
The effects of management on vegetation trajectories during the early‐stage restoration of previously arable land after hay transfer
Cited by: 2
Author(s): Myriam Garrouj, Didier Alard, Emmanuel Corcket, Lilian Marchand, Marie‐Lise Benot
Software Mentions: 4
Published: almost 5 years ago
10.1002/ece3.3925
Environmental determinism, and not interspecific competition, drives morphological variability in Australasian warblers (Acanthizidae)
Cited by: 3
Author(s): Vicente García‐Navas, Marta Rodríguez-Rey, Petter Z. Marki, Leslie Christidis
Software Mentions: 4
Published: over 6 years ago
10.1186/s40635-021-00373-z
Longitudinal multi-omics transition associated with fatality in critically ill COVID-19 patients
Cited by: 8
Author(s): Chaoyang Sun, Yuzhe Sun, Ping Wu, Wencheng Ding, Shiyou Wang, Jiafeng Li, Langchao Liang, Chaochao Chai, Yu Fu, Zhiming Li, Linnan Zhu, Jia Ju, Xin Liao, Xiaoyuan Huang, Feng Li, Ding Ma, Liang He, Dongsheng Chen, Gang Chen, Xin Jin, Peng Wu
Software Mentions: 4
Published: over 3 years ago
10.6026/97320630016567
Bacterial community dynamics with rhizosphere of Calotropis procera and Senna alexandrina desert plants in Saudi Arabia
Cited by: 4
Author(s): Diana A. Al-Quwaie
Software Mentions: 4
Published: about 4 years ago
10.1186/s12917-018-1691-x
An intensive milk replacer feeding program benefits immune response and intestinal microbiota of lambs during weaning
Cited by: 17
Author(s): Qian Zhang, Chong Li, Xiaolin Niu, Zhian Zhang, Fadi Li, Fēi Li
Software Mentions: 4
Published: almost 6 years ago
10.7717/peerj.8991
Proteomic analysis and interactions network in leaves of mycorrhizal and nonmycorrhizal sorghum plants under water deficit
Cited by: 9
Author(s): Víctor Olalde‐Portugal, José Luis Cabrera-Ponce, Argel Gastélum-Arellánez, Armando Guerrero‐Rangel, Robert Winkler, Silvia Valdés‐Rodríguez
Software Mentions: 4
Published: over 4 years ago
10.3390/insects11120834
Low Genetic Variability in Bemisia tabaci MEAM1 Populations within Farmscapes of Georgia, USA
Cited by: 16
Author(s): Saurabh Gautam, Michael S. Crossley, Bhabesh Dutta, Timothy Coolong, Alvin M. Simmons, Andre da Silva, William E. Snyder, Rajagopalbabu Srinivasan
Software Mentions: 4
Published: almost 4 years ago
10.7717/peerj.9388
Geographic variation in the skull morphology of the lesser grison (<i>Galictis cuja</i>: Carnivora, Mustelidae) from two Brazilian ecoregions
Cited by: 4
Author(s): Raissa Prior Migliorini, Rodrigo Fornel, Carlos Benhur Kasper
Software Mentions: 4
Published: about 4 years ago
10.7717/peerj.3667
Changes in zooplankton community, and seston and zooplankton fatty acid profiles at the freshwater/saltwater interface of the Chowan River, North Carolina
Cited by: 8
Author(s): Deborah A. Lichti, Jacques Rinchard, David G. Kimmel
Software Mentions: 4
Published: over 7 years ago
10.1002/ece3.929
Evidence for nonallopatric speciation among closely related sympatric<i><scp>H</scp>eliotropium</i>species in the<scp>A</scp>tacama<scp>D</scp>esert
Cited by: 10
Author(s): Federico Luebert, Pit Jacobs, Hartmut H. Hilger, Ludo A. H. Muller
Software Mentions: 4
Published: almost 11 years ago
10.1002/ece3.4448
Functional Redundancy in bird community decreases with riparian forest width reduction
Cited by: 11
Author(s): Lucas Andrigo Maure, Rodolpho Credo Rodrigues, Ângelo V. Alcântara, Bruno F. C. B. Adorno, Douglas Luiz dos Santos, Eduardo Abreu, Rafael Mitsuo Tanaka, R. Manoel Gonçalves, Érica Hasui
Software Mentions: 4
Published: about 6 years ago
10.1080/19490976.2020.1822729
Metagenomic analysis reveals distinct patterns of gut lactobacillus prevalence, abundance, and geographical variation in health and disease
Cited by: 20
Author(s): Tarini Shankar Ghosh, Jerome Arnoux, Paul W. O’Toole
Software Mentions: 4
Published: about 4 years ago
10.3390/insects12020163
Evaluating the Impact of Post-Emergence Weed Control in Honeybee Colonies Located in Different Agricultural Surroundings
Cited by: 2
Author(s): Ivana Macri, Diego E. Vázquez, Eduardo Pagano, Jorge A. Zavala, Walter M. Farina
Software Mentions: 4
Published: almost 4 years ago
10.7717/peerj.1241
Partitioning the impact of environment and spatial structure on alpha and beta components of taxonomic, functional, and phylogenetic diversity in European ants
Cited by: 74
Author(s): Xavier Arnán, Xím Cerdá, Javier Retana
Software Mentions: 4
Published: about 9 years ago
10.1002/ece3.5964
Opening the door to greater phylogeographic inference in Southeast Asia: Comparative genomic study of five codistributed rainforest bird species using target capture and historical DNA
Cited by: 9
Author(s): Haw Chuan Lim, Subir B. Shakya, Michael Harvey, Robert G. Moyle, Robert C. Fleischer, Michael J. Braun, Frederick H. Sheldon
Software Mentions: 4
Published: over 4 years ago
10.7717/peerj.1028
Genetic architecture of pollination syndrome transition between hummingbird-specialist and generalist species in the genus<i>Rhytidophyllum</i>(Gesneriaceae)
Cited by: 20
Author(s): Hermine Alexandre, Justine Vrignaud, Brigitte Mangin, Simon Joly
Software Mentions: 4
Published: over 9 years ago
10.1002/ece3.5056
Genome streamlining via complete loss of introns has occurred multiple times in lichenized fungal mitochondria
Cited by: 26
Author(s): Cloe S. Pogoda, Kyle G. Keepers, Arif Y. Nadiadi, Dustin W Bailey, James C. Lendemer, Erin A. Tripp, Nolan C. Kane
Software Mentions: 4
Published: over 5 years ago
10.1371/journal.pone.0130151
Using Plant Functional Traits and Phylogenies to Understand Patterns of Plant Community Assembly in a Seasonal Tropical Forest in Lao PDR
Cited by: 20
Author(s): Manichanh Satdichanh, Jérôme Millet, Andreas Heinimann, Khamseng Nanthavong, Rhett D. Harrison
Software Mentions: 4
Published: over 9 years ago
10.7717/peerj.2768
Diversity, taxonomic composition, and functional aspects of fungal communities in living, senesced, and fallen leaves at five sites across North America
Cited by: 44
Author(s): Jana M. U’Ren, A. Elizabeth Arnold
Software Mentions: 4
Published: almost 8 years ago
10.1002/ece3.2691
Multifunctionality is affected by interactions between green roof plant species, substrate depth, and substrate type
Cited by: 37
Author(s): Yann Dusza, Sébastien Barot, Yvan Kraepiel, Jean‐Christophe Lata, Luc Abbadie, Xavier Raynaud
Software Mentions: 4
Published: over 7 years ago
10.1002/ece3.7620
Prey availability and intraguild competition regulate the spatiotemporal dynamics of a modified large carnivore guild
Cited by: 10
Author(s): Robert S. Davis, Richard W. Yarnell, Louise K. Gentle, Antonio Uzal, William O. Mgoola, Emma L. Stone
Software Mentions: 4
Published: over 3 years ago
10.3390/pathogens9090723
Differences in the Endophytic Microbiome of Olive Cultivars Infected by Xylella fastidiosa across Seasons
Cited by: 35
Author(s): Annalisa Giampetruzzi, Paula Baptista, Massimiliano Morelli, Cristina Cameirão, Teresa Lino-Neto, Daniela Costa, Giusy D’Attoma, Raied Abou Kubaa, Giuseppe Altamura, María Saponari, José Alberto Pereira, P. Saldarelli
Software Mentions: 4
Published: about 4 years ago
10.1186/s13071-018-2933-2
Aedes aegypti in the Black Sea: recent introduction or ancient remnant?
Cited by: 37
Author(s): Panayiota Kotsakiozi, Andrea Gloria‐Soria, Francis Schaffner, Vincent Robert, Jeffrey R. Powell
Software Mentions: 4
Published: over 6 years ago
10.1186/s12866-020-01990-6
The effects of exopolysaccharides and exopolysaccharide-producing Lactobacillus on the intestinal microbiome of zebrafish (Danio rerio)
Cited by: 17
Author(s): Chenchen Ma, Hongyang Guo, Haibo Chang, Shi Huang, Shuaiming Jiang, Dongxue Huo, Jiachao Zhang, Xiaopeng Zhu
Software Mentions: 4
Published: about 4 years ago
10.3389/fpls.2021.636915
Trait Diversity of Pulse Species Predicts Agroecosystem Properties Trade-Offs
Cited by: 0
Author(s): Julie Guiguitant, Denis Vile, Hélène Marrou
Software Mentions: 4
Published: over 3 years ago
10.3389/fpls.2021.679428
Altitudinal Zonation of Green Algae Biodiversity in the French Alps
Cited by: 17
Author(s): Adeline Stewart, Delphine Rioux, Frédéric Boyer, Ludovic Gielly, François Pompanon, Amélie Saillard, Wilfried Thuiller, Jean-Gabriel Valay, Éric Maréchal, Éric Coissac
Software Mentions: 4
Published: over 3 years ago
10.1002/ece3.7447
The impact of aquaculture on the genetics and distribution of the onuphid annelid <i>Diopatra biscayensis</i>
Cited by: 2
Author(s): Matthew P. Galaska, David S. Wethey, Andrés Arias, Stanislas F. Dubois, Kenneth M. Halanych, Sarah A. Woodin
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0224214
Early succession on slag compared to urban soil: A slower recovery
Cited by: 4
Author(s): Heng-Xing Zou, Alison E. Anastasio, Catherine A. Pfister
Software Mentions: 4
Published: almost 5 years ago
10.1186/s40851-015-0013-4
Spatial and temporal variation at major histocompatibility complex class IIB genes in the endangered Blakiston’s fish owl
Cited by: 18
Author(s): Tetsuo I. Kohyama, Keita Omote, Chizuko Nishida, Takeshi Takenaka, Keisuke Saito, Satoshi Fujimoto, Ryuichi Masuda
Software Mentions: 4
Published: over 9 years ago
10.1007/s12520-020-01123-0
Identifying early stages of reindeer domestication in the archaeological record: a 3D morphological investigation on forelimb bones of modern populations from Fennoscandia
Cited by: 22
Author(s): Maxime Pelletier, Antti Kotiaho, Sirpa Niinimäki, Anna‐Kaisa Salmi
Software Mentions: 4
Published: over 4 years ago
10.1186/s12913-020-05989-7
Social determinants of health and hospital readmissions: can the HOSPITAL risk score be improved by the inclusion of social factors?
Cited by: 4
Author(s): Shirlene Obuobi, Rhys Chua, Stephanie Besser, Corey E. Tabit
Software Mentions: 4
Published: almost 4 years ago
10.3389/fpls.2012.00249
Compromise of Multiple Time-Resolved Transcriptomics Experiments Identifies Tightly Regulated Functions
Cited by: 6
Author(s): Sebastian Klie, Camila Caldana, Zoran Nikoloski
Software Mentions: 4
Published: almost 13 years ago
10.1186/s12864-017-4416-9
Efficiency of different strategies to mitigate ascertainment bias when using SNP panels in diversity studies
Cited by: 72
Author(s): Dorcus Kholofelo Malomane, Christian Reimer, Steffen Weigend, Annett Weigend, Ahmad Sharifi, Henner Simianer
Software Mentions: 4
Published: almost 7 years ago
10.1186/1471-2164-13-549
Evolutionary force in confamiliar marine vertebrates of different temperature realms: adaptive trends in zoarcid fish transcriptomes
Cited by: 17
Author(s): Heidrun Sigrid Windisch, Magnus Lucassen, Stephan Frickenhaus
Software Mentions: 4
Published: almost 13 years ago
10.1371/journal.pone.0155547
A Source Area Approach Demonstrates Moderate Predictive Ability but Pronounced Variability of Invasive Species Traits
Cited by: 5
Author(s): Günther Klonner, Stefan Fischer, Franz Essl, Stefan Dullinger
Software Mentions: 4
Published: over 8 years ago
10.1007/s00404-019-05336-0
Changes in intestinal microflora in digestive tract diseases during pregnancy
Cited by: 20
Author(s): Min Jin, Dong Li, Rui Ji, Wen Li, Xiaofei Xu, Yanqing Li
Software Mentions: 4
Published: almost 5 years ago
10.1111/gcb.14495
Extreme drought pushes stream invertebrate communities over functional thresholds
Cited by: 65
Author(s): Thomas W. H. Aspin, Kieran Khamis, Thomas J. Matthews, Alexander M. Milner, Matthew J. O’Callaghan, Mark Trimmer, Guy Woodward, Mark E. Ledger
Software Mentions: 4
Published: about 6 years ago
10.1186/s13567-014-0114-7
Multilocus sequence analysis of Anaplasma phagocytophilum reveals three distinct lineages with different host ranges in clinically ill French cattle
Cited by: 25
Author(s): Amélie Chastagner, Thibaud Dugat, Gwenaël Vourc’H, Hélène Verheyden, Loïc Legrand, Véronique Bachy, Luc Chabanne, Guy Joncour, Renaud Maillard, Henri-Jean Boulouis, Nadia Haddad, Xavier Bailly, Agnès Leblond
Software Mentions: 4
Published: almost 10 years ago
10.1186/s12864-015-1266-1
Genetic diversity and trait genomic prediction in a pea diversity panel
Cited by: 80
Author(s): Judith Burstin, Pauline Salloignon, Marianne Chabert-Martinello, Jean Bernard Magnin-Robert, Mathieu Siol, Françoise Jacquin, Aurélie Chauveau, Caroline Pont, Grégoire Aubert, Catherine Delaitre, Caroline Truntzer, Gérard Duc
Software Mentions: 4
Published: over 9 years ago
10.3390/molecules25235505
Carbon Atoms Speaking Out: How the Geometric Sensitivity of 13C Chemical Shifts Leads to Understanding the Colour Tuning of Phycocyanobilin in Cph1 and AnPixJ
Cited by: 5
Author(s): Sascha Jähnigen, Daniel Sebastiani
Software Mentions: 4
Published: almost 4 years ago
10.1002/ece3.6973
Morphometric and genetic evidence for four species of gentoo penguin
Cited by: 10
Author(s): Joshua Tyler, Matthew T. Bonfitto, Gemma V. Clucas, Srinivas K. Reddy, Jane L. Younger
Software Mentions: 4
Published: about 4 years ago
10.1002/ece3.7225
Differential geographic patterns in song components of male Albert’s lyrebirds
Cited by: 4
Author(s): Fiona Backhouse, Anastasia H. Dalziell, Robert D. Magrath, Aaron N. Rice, Taylor L. Crisologo, Justin A. Welbergen
Software Mentions: 4
Published: almost 4 years ago
10.3389/fmicb.2020.556118
Beneficial Effects of Mixing Kentucky Bluegrass With Red Fescue via Plant-Soil Interactions in Black Soil of Northeast China
Cited by: 6
Author(s): Fang Xie, Gaoyun Zhang, Qianjiao Zheng, Kemeng Liu, Xiujie Yin, Xiaoyang Sun, Shah Saud, Zhan Shi, Runli Yuan, Wenjing Deng, Lu Zhang, Guowen Cui, Yajun Chen
Software Mentions: 4
Published: about 4 years ago