cran: WGCNA | Projects | Ecosyste.ms: Papers

10.1186/1755-8794-4-5

Incorporating higher-order representative features improves prediction in network-based cancer prognosis analysis
Cited by: 18
Author(s): Shuangge Ma, Michael R. Kosorok, Jian Huang, Ying Dai
Software Mentions: 1
Published: over 15 years ago

10.3390/ijms21249417

Activation of the Ion Channel TRPV4 Induces Epithelial to Mesenchymal Transition in Breast Cancer Cells
Cited by: 20
Author(s): Iman Azimi, Mélanie Robitaille, Kaela Armitage, Choon Leng So, Michael J. G. Milevskiy, Korinne Northwood, Huai Fang Lim, Erik W. Thompson, Sarah J. Roberts‐Thomson, Gregory R. Monteith
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphar.2021.474267

The Advantages of Connectivity Map Applied in Traditional Chinese Medicine
Cited by: 9
Author(s): Huimin Jiang, Cheng Hu, Meijuan Chen
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-39236-9

WRINKLED1 transcription factor orchestrates the regulation of carbon partitioning for C18:1 (oleic acid) accumulation in Siberian apricot kernel
Cited by: 18
Author(s): Shuya Deng, Yiting Mai, Lanya Shui, Jun Niu
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-39463-0

Transcriptome analysis reveals the impact of arbuscular mycorrhizal symbiosis on Sesbania cannabina expose to high salinity
Cited by: 17
Author(s): Changliang Ren, Kong Chen, Yan Ke, Zhihong Xie
Software Mentions: 1
Published: over 7 years ago

10.3389/fphar.2020.00881

Integrated PPI- and WGCNA-Retrieval of Hub Gene Signatures Shared Between Barrett's Esophagus and Esophageal Adenocarcinoma
Cited by: 54
Author(s): Asma Sindhoo Nangraj, Gurudeeban Selvaraj, Satyavani Kaliamurthi, Aman Chandra Kaushik, William C. Cho, Dong Wei
Software Mentions: 1
Published: about 6 years ago

10.1186/1471-2164-11-589

Is human blood a good surrogate for brain tissue in transcriptional studies?
Cited by: 101
Author(s): Chaochao Cai, Peter Langfelder, Tova Fuller, Michael C. Oldham, Rui Luo, Leonard H van den Berg, Roel A. Ophoff, Steve Horvath
Software Mentions: 1
Published: almost 16 years ago

10.1002/mgg3.1478

Identification of a missense <i>ARSA</i> mutation in metachromatic leukodystrophy and its potential pathogenic mechanism
Cited by: 2
Author(s): Liyuan Guo, Bo Jin, Yidan Zhang, Jing Wang
Software Mentions: 1
Published: about 6 years ago

10.1186/s13041-019-0521-9

Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
Cited by: 14
Author(s): Ji-Won Kwon, Yeong Jae Kim, Kyoung Soon Choi, Sihwan Seol, Hyo Jung Kang
Software Mentions: 1
Published: almost 7 years ago

10.1186/1471-2164-10-327

Signed weighted gene co-expression network analysis of transcriptional regulation in murine embryonic stem cells
Cited by: 189
Author(s): Mike J. Mason, Guoping Fan, Kathrin Plath, Qing Zhou, Steve Horvath
Software Mentions: 1
Published: about 17 years ago

10.1186/s12920-016-0171-z

Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses
Cited by: 30
Author(s): Niamh M. Troy, Elysia M. Hollams, Patrick G. Holt, Anthony Bosco
Software Mentions: 1
Published: over 10 years ago

10.1186/s12920-018-0407-1

Identification of glioblastoma gene prognosis modules based on weighted gene co-expression network analysis
Cited by: 32
Author(s): Pengfei Xu, Jian Yang, Junhui Liu, Yang Xue, Jianming Liao, Fanen Yuan, Yang Xu, Baohui Liu
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0033748

Identification of Gene Modules Associated with Drought Response in Rice by Network-Based Analysis
Cited by: 62
Author(s): Lida Zhang, Shunwu Yu, Kaijing Zuo, Lijun Luo, Kexuan Tang
Software Mentions: 1
Published: over 14 years ago

10.1038/s41598-019-41813-x

Liver proteomics unravel the metabolic pathways related to Feed Efficiency in beef cattle
Cited by: 37
Author(s): Leydiana Duarte Fonseca, Joanir Pereira Eler, Mikaele Alexandre Pereira, Alessandra Fernandes Rosa, Pâmela Almeida Alexandre, Cristina Tschorny Moncau, Fernanda Salvato, Lívia Rosa-Fernandes, Giuseppe Palmisano, José Bento Sterman Ferraz, Heidge Fukumasu
Software Mentions: 1
Published: over 7 years ago

10.3389/fphys.2017.00594

Murine Myocardial Transcriptome Analysis Reveals a Critical Role of COPS8 in the Gene Expression of Cullin-RING Ligase Substrate Receptors and Redox and Vesicle Trafficking Pathways
Cited by: 7
Author(s): Ammara Abdullah, Kathleen M. Eyster, Travis Bjordahl, Xiao Peng, Erliang Zeng, Xuejun Wang
Software Mentions: 1
Published: about 9 years ago

10.3389/fphys.2020.623190

Transcriptomic Coupling of PKP2 With Inflammatory and Immune Pathways Endogenous to Adult Cardiac Myocytes
Cited by: 11
Author(s): Marta Pérez-Hernández, Grecia M Marrón-Liñares, Florencia Schlamp, Adriana Heguy, Chantal J.M. van Opbergen, Valeria Mezzano, Mingliang Zhang, Feng-Xia Liang, Marina Cerrone, Mario Delmar
Software Mentions: 1
Published: over 5 years ago

10.3389/fphys.2017.00822

Alternation of Gut Microbiota in Patients with Pulmonary Tuberculosis
Cited by: 102
Author(s): Moulun Luo, Yong Liu, Pengfei Wu, Dongxia Luo, Qun Sun, Han Zheng, Richard Hu, Stephen J. Pandol, Qingfeng Li, Yuan‐Ping Han, Yilan Zeng
Software Mentions: 1
Published: almost 9 years ago

10.1155/2018/8726456

“Omics” Signatures in Peripheral Monocytes from Women with Low BMD Condition
Cited by: 2
Author(s): Bhavna Daswani, M. Ikram Khatkhatay
Software Mentions: 1
Published: over 8 years ago

10.1002/ece3.7024

Comparative transcriptomics reveals the molecular genetic basis of pigmentation loss in <i>Sinocyclocheilus</i> cavefishes
Cited by: 13
Author(s): Chun‐Qing Li, Hongyu Chen, Yinchen Zhao, Shanyuan Chen, Hang Xiao
Software Mentions: 1
Published: almost 6 years ago

10.1053/j.gastro.2021.01.221

Mucosal Genomics Implicate Lymphocyte Activation and Lipid Metabolism in Refractory Environmental Enteric Dysfunction
Cited by: 34
Author(s): Yael Haberman, Najeeha Talat Iqbal, Sudhir Ghandikota, Indika Mallawaarachchi, Tzipi Braun, Phillip Dexheimer, Najeeb Rahman, Rotem Hadar, Kamran Sadiq, Zubair Ahmad, Romana Idress, Junaid Iqbal, Sheraz Ahmed, Aneeta Hotwani, Fayyaz Umrani, Lubaina Ehsan, Greg Medlock, Sana Syed, Chris Moskaluk, Z. Jennie, Anil G. Jegga, Sean R. Moore, Syed Asad Ali, Lee A. Denson
Software Mentions: 1
Published: over 5 years ago

10.1155/2021/5584684

RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification
Cited by: 0
Author(s): Lei Wang, Juntao Li, Juanfang Liu, Mingming Chang
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22010454

RNA-Seq Provides New Insights into the Molecular Events Involved in “Ball-Skin versus Bladder Effect” on Fruit Cracking in Litchi
Cited by: 10
Author(s): Jun Wang, Xuehong Wu, Yong Tang, Jian Guo Li, Ming Zhao
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0156598

Identification of the MicroRNA Repertoire in TLR-Ligand Challenged Bubaline PBMCs as a Model of Bacterial and Viral Infection
Cited by: 11
Author(s): Jasdeep Singh, C.S. Mukhopadhyay, Simarjeet Kaur, Purnima Malhotra, R. S. Sethi, Ratan K. Choudhary
Software Mentions: 1
Published: over 10 years ago

10.1186/s12920-020-0702-5

Gene co-expression networks are associated with obesity-related traits in kidney transplant recipients
Cited by: 4
Author(s): Rosario B. Jaime-Lara, Abhrarup Roy, Yupeng Wang, Ansley Grimes Stanfill, Ann K. Cashion, Paule V. Joseph
Software Mentions: 1
Published: over 6 years ago

10.18632/aging.102971

Prognostic values of immune scores and immune microenvironment-related genes for hepatocellular carcinoma
Cited by: 22
Author(s): Penglei Ge, Shifang Li, Weiwei Wang, Chunbo Li, Yu-Bin Fu, Zhengkai Feng, Lin Li, Gong Zhang, Zhiqiang Gao, Xiaowei Dang, Yang Wu
Software Mentions: 1
Published: over 6 years ago

10.3390/genes9070325

Weighted Gene Co-Expression Network Analysis Reveals Dysregulation of Mitochondrial Oxidative Phosphorylation in Eating Disorders
Cited by: 4
Author(s): Liulin Yang, Yun Li, Turki Turki, Huizi Tan, Zhi Wei, Xiao Chang
Software Mentions: 1
Published: about 8 years ago

10.3390/genes9070336

Transcriptome Analysis of Adipose Tissue Indicates That the cAMP Signaling Pathway Affects the Feed Efficiency of Pigs
Cited by: 23
Author(s): Yongming Xu, Xiaolong Qi, Mingyang Hu, Ruiyi Lin, Ye Hou, Zhangxu Wang, Huanhuan Zhou, Yi‐Fang Zhao, Yu Luan, Shuhong Zhao, Xinyun Li
Software Mentions: 1
Published: about 8 years ago

10.1186/s12863-015-0311-z

Gene expression in large pedigrees: analytic approaches
Cited by: 5
Author(s): Rita M. Cantor, Heather J. Cordell
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-42953-w

Modulation of chromatin remodeling proteins SMYD1 and SMARCD1 promotes contractile function of human pluripotent stem cell-derived ventricular cardiomyocyte in 3D-engineered cardiac tissues
Cited by: 7
Author(s): Maggie Zi Ying Chow, Stephanie N. Sadrian, Wendy Keung, Lin Geng, Lihuan Ren, Chi-Wing Kong, Andy O.-T. Wong, Jean‐Sébastien Hulot, Christopher Chen, Kevin D. Costa, Roger J. Hajjar, Gary Tse
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-44203-5

Co-expression network analysis identifies gonad- and embryo-associated protein modules in the sentinel species Gammarus fossarum
Cited by: 12
Author(s): Davide Degli Esposti, Christine Almunia, Marc-Antoine Guery, Natacha Koenig, Jean Armengaud, Arnaud Chaumot, Olivier Geffard
Software Mentions: 1
Published: over 7 years ago

10.3390/genes10040296

Brassica napus Infected with Leptosphaeria maculans
Cited by: 8
Author(s): Jinqi Ma, Lijuan Wei, Lin Ai, Chao Zhang, Wei Sun, Bo Yang, Kun Lu, Jiana Li
Software Mentions: 1
Published: over 7 years ago

10.1186/s12863-018-0648-1

Epigenetics, heritability and longitudinal analysis
Cited by: 5
Author(s): Haakon E. Nustad, Marcio Almeida, Angelo J. Canty, Marissa LeBlanc, Christian M. Page, Phillip E. Melton
Software Mentions: 1
Published: about 8 years ago

10.3390/v11080683

Hepatitis C Virus as a Unique Human Model Disease to Define Differences in the Transcriptional Landscape of T Cells in Acute versus Chronic Infection
Cited by: 5
Author(s): David Wolski, Georg M. Lauer
Software Mentions: 1
Published: about 7 years ago

10.1186/s12876-017-0637-2

miR-363-5p as potential prognostic marker for hepatocellular carcinoma indicated by weighted co-expression network analysis of miRNAs and mRNA
Cited by: 18
Author(s): Jun Zhang, Jia Fan, Chongming Zhou, Yanyu Qi
Software Mentions: 1
Published: about 9 years ago

10.1155/2020/9827349

The Effect of Inflammation on the Formation of Thyroid Nodules
Cited by: 4
Author(s): Zexin Li, Yiteng Huang, Xiang Cheng, Chiju Wei, Peixuan Yang, Weilai Xu
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms22031020

DNA Methylation Analysis Identifies Patterns in Progressive Glioma Grades to Predict Patient Survival
Cited by: 13
Author(s): Jing Yin Weng, Nicole Salazar
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0170870

Preferential expression of scores of functionally and evolutionarily diverse DNA and RNA-binding proteins during Oxytricha trifallax macronuclear development
Cited by: 7
Author(s): Zachary T. Neeb, Daniel J. Hogan, Sol Katzman, Alan M. Zahler
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-019-46219-3

A gene expression network analysis of the pancreatic islets from lean and obese mice identifies complement 1q like-3 secreted protein as a regulator of β-cell function
Cited by: 7
Author(s): James E. Koltes, Itika Arora, Rajesh Gupta, Dan C. Nguyen, Michael D. Schaid, Jeong‐A Kim, Michelle E. Kimple, Sushant Bhatnagar
Software Mentions: 1
Published: about 7 years ago

10.3390/cancers10090307

A Comprehensive Survey of Immune Cytolytic Activity-Associated Gene Co-Expression Networks across 17 Tumor and Normal Tissue Types
Cited by: 4
Author(s): Tian Tian, Ji Wan, Han Yan, Haoran Liu, Feng Gao, Ying Pan, Qi Song, Zhi Wei
Software Mentions: 1
Published: about 8 years ago

10.18632/aging.202713

LncRNA-mRNA co-expression analysis discovered the diagnostic and prognostic biomarkers and potential therapeutic agents for myocardial infarction
Cited by: 6
Author(s): Xiaocong Zhang, Ziqi Chen, Jiabin Zang, Chun Yao, Jian Shi, Ruqiong Nie, Guifu Wu
Software Mentions: 1
Published: over 5 years ago

10.3390/genes10100798

Transcriptional Networks of Microglia in Alzheimer’s Disease and Insights into Pathogenesis
Cited by: 17
Author(s): Gabriel Chew, Enrico Petretto
Software Mentions: 1
Published: almost 7 years ago

10.3390/genes10110920

RNA Sequencing Reveals That Both Abiotic and Biotic Stress-Responsive Genes are Induced during Expression of Steroidal Glycoalkaloid in Potato Tuber Subjected to Light Exposure
Cited by: 6
Author(s): Weina Zhang, Cunwu Zuo, Zhongjian Chen, Yichen Kang, Shuhao Qin
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms22042079

Dysfunctional Gut Microbiome Networks in Childhood IgE-Mediated Food Allergy
Cited by: 24
Author(s): Khui Hung Lee, Jing Guo, Yong Song, Amir Ariff, Michael O’Sullivan, Belinda J. Hales, Benjamin J. Mullins, Guicheng Zhang
Software Mentions: 1
Published: over 5 years ago

10.1186/s12862-017-1036-6

Annotating long intergenic non-coding RNAs under artificial selection during chicken domestication
Cited by: 12
Author(s): Yun-Mei Wang, Haibo Xu, Mingshan Wang, Newton O. Otecko, Lingqun Ye, Dongdong Wu, Yaping Zhang
Software Mentions: 1
Published: about 9 years ago

10.18632/aging.104083

Identification of novel prognosis-related genes in the endometrial cancer immune microenvironment
Cited by: 14
Author(s): Jian Ma, Jingkai Zhang, Di Yang, Xiaoxin Ma
Software Mentions: 1
Published: almost 6 years ago

10.3390/genes11030315

Grape-RNA: A Database for the Collection, Evaluation, Treatment, and Data Sharing of Grape RNA-Seq Datasets
Cited by: 11
Author(s): Yi Wang, Rui Zhang, Zhenchang Liang, Shaohua Li
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-48287-x

Genome-wide Identification, Classification, Expression and Duplication Analysis of GRAS Family Genes in Juglans regia L.
Cited by: 18
Author(s): Shaowen Quan, Jianxin Niu, Li Zhou, Hang Xu, Lan Ma, Qin Yang
Software Mentions: 1
Published: about 7 years ago

10.1186/s12920-015-0098-9

Co-expression network of neural-differentiation genes shows specific pattern in schizophrenia
Cited by: 39
Author(s): Mariana Maschietto, Ana Carolina Tahira, Renato Puga, Leandro Lima, Daniel Mariani, Bruna Paulsen, Paulo Belmonte-de-Abreu, Henrique Cursino Vieira, Ana Cristina Victorino Krepischi, Dirce Maria Carraro, Joana Almeida Palha, Stevens K. Rehen, Helena Brentani
Software Mentions: 1
Published: over 11 years ago

10.1186/1755-8794-7-51

Genetic network identifies novel pathways contributing to atherosclerosis susceptibility in the innominate artery
Cited by: 9
Author(s): Jody Albright, Pamela M. Quizon, Aldons J. Lusis, Brian J. Bennett
Software Mentions: 1
Published: about 12 years ago

10.1186/s12859-020-03861-3

LC-N2G: a local consistency approach for nutrigenomics data analysis
Cited by: 1
Author(s): Xiangnan Xu, Samantha M. Solon-Biet, Alistair M. Senior, David Raubenheimer, Stephen J. Simpson, Luigi Fontana, Samuel Mueller, Jean Yee Hwa Yang
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers12071809

Identification of GSN and LAMC2 as Key Prognostic Genes of Bladder Cancer by Integrated Bioinformatics Analysis
Cited by: 16
Author(s): Jia-Lian Yang, Charles C.N. Wang, Jia-Hua Cai, Che‐Yi Chou, Yu‐Hsien Lin, Chin‐Chuan Hung
Software Mentions: 1
Published: about 6 years ago

10.1016/j.isci.2021.102265

Temporal metabolic and transcriptomic characteristics crossing islets and liver reveal dynamic pathophysiology in diet-induced diabetes
Cited by: 8
Author(s): Rui Gao, Qi Fu, Hemin Jiang, Min Shen, Ruipeng Zhao, Yu Q, Yunqiang He, Kuanfeng Xu, Xinyu Xu, Heng Chen, Quan Zhang, Tao Yang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-50507-3

Genome-wide association analysis of hippocampal volume identifies enrichment of neurogenesis-related pathways
Cited by: 18
Author(s): Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 1
Published: almost 7 years ago

10.3390/genes11080927

Genome-Wide Analysis of the Role of NAC Family in Flower Development and Abiotic Stress Responses in Cleistogenes songorica
Cited by: 10
Author(s): Xifang Zong, Yan Qi, Fan Wu, Qian Ma, Jiyu Zhang
Software Mentions: 1
Published: about 6 years ago

10.3390/genes11080942

Advances in Genomics for Drug Development
Cited by: 18
Author(s): Roberto Spreafico, Leah Soriaga, Johannes Grosse, Herbert W. Virgin, Amalio Telenti
Software Mentions: 1
Published: about 6 years ago

10.18632/aging.202761

A five-m6A regulatory gene signature is a prognostic biomarker in lung adenocarcinoma patients
Cited by: 12
Author(s): Ximei Wu, Hongxu Sheng, Luming Wang, Pinghui Xia, Yiqing Wang, Li Yu, Wang Lv, Jian Hu
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11111688

Secondary Somatic Mutations in G-Protein-Related Pathways and Mutation Signatures in Uveal Melanoma
Cited by: 17
Author(s): Francesca Piaggio, Veronica Tozzo, Cinzia Bernardi, Michela Croce, Roberto Puzone, Silvia Viaggi, Serena Patrone, Annalisa Barla, Domenico Coviello, Martine J. Jager, Pieter A. van der Velden, Michael Zeschnigk, Davide Cangelosi, Alessandra Eva, Ulrich Pfeffer, Adriana Amaro
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-021-85020-z

Systems-wide effects of short-term feed deprivation in obese mice
Cited by: 2
Author(s): Daniel S. Andersen, Henrik Munch Roager, Li Zhang, Janne Marie Moll, Henrik Lauritz Frandsen, Niels Banhos Danneskiold‐Samsøe, Axel Kornerup Hansen, Karsten Kristiansen, Tine Rask Licht, Susanne Brix
Software Mentions: 1
Published: over 5 years ago

10.3390/cancers11040477

Exosomal miRNAs as Novel Pharmacodynamic Biomarkers for Cancer Chemopreventive Agent Early Stage Treatments in Chemically Induced Mouse Model of Lung Squamous Cell Carcinoma
Cited by: 6
Author(s): Yanzhao Zhou, Ming You, Meijun Du, Donghai Xiong, Yian Wang, Altaf Mohammed, Ronald A. Lubet, Liang Wang, Ming You
Software Mentions: 1
Published: over 7 years ago

10.3390/genes12010087

K-Module Algorithm: An Additional Step to Improve the Clustering Results of WGCNA Co-Expression Networks
Cited by: 15
Author(s): Jie Hou, Xiufen Ye, Chuanlong Li, Yixing Wang
Software Mentions: 1
Published: over 5 years ago

10.1186/s13048-020-00710-y

Identification of WTAP-related genes by weighted gene co-expression network analysis in ovarian cancer
Cited by: 11
Author(s): Jing Wang, Jing Xu, Ke Li, Yunke Huang, Yilin Dai, Congjian Xu, Yu Kang
Software Mentions: 1
Published: almost 6 years ago

10.3390/cancers12082230

Interplay of tRNA-Derived Fragments and T Cell Activation in Breast Cancer Patient Survival
Cited by: 17
Author(s): Nayang Shan, Ningshan Li, Qile Dai, Lin Hou, Xiting Yan, Amei Amei, Lei Lü, Zuoheng Wang
Software Mentions: 1
Published: about 6 years ago

10.3390/cancers13122990

Transcriptomic and Genetic Associations between Alzheimer’s Disease, Parkinson’s Disease, and Cancer
Cited by: 24
Author(s): Jaume Forés-Martos, César Boullosa, David Rodrigo-Domínguez, Jon Sánchez-Valle, Beatriz Suay-García, Joan Climent, Antonio Falcó, Alfonso Valencia, Joan Antón Puig-Butillé, Susana Puig, Rafael Tabarés‐Seisdedos
Software Mentions: 1
Published: over 5 years ago

10.3390/genes12030449

Identification of Chlorophyll Metabolism- and Photosynthesis-Related Genes Regulating Green Flower Color in Chrysanthemum by Integrative Transcriptome and Weighted Correlation Network Analyses
Cited by: 7
Author(s): Hansen Fu, Tuo Zeng, Yangyang Zhao, Tingting Luo, Huijie Deng, Chenwei Meng, Luo Jia, Caiyun Wang
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.8496

Development of a prediction model for radiosensitivity using the expression values of genes and long non-coding RNAs
Cited by: 8
Author(s): Weian Wang, Liang‐Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
Software Mentions: 1
Published: over 10 years ago

10.3390/molecules22060889

Comprehensive Characterization for Ginsenosides Biosynthesis in Ginseng Root by Integration Analysis of Chemical and Transcriptome
Cited by: 21
Author(s): Jingjing Zhang, He Su, Lei Zhang, Baosheng Liao, Shaobo Xiao, Lixin Dong, Zhigang Hu, Ping Wang, Xiwen Li, Zhixing Huang, Zhiming Gao, Lianjuan Zhang, Liang Shen, Ruiyang Cheng, Jiang Xu, Shilin Chen
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-019-50909-3

Proteomic analysis of eleven tissues in the Chinese giant salamander (Andrias davidianus)
Cited by: 5
Author(s): Xiaofang Geng, Jiuxin Guo, Xiayan Zang, Cuifang Chang, Haitao Shang, Hong Wei, Chi Xu
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms22094410

Gene Coexpression Network Analysis Indicates that Hub Genes Related to Photosynthesis and Starch Synthesis Modulate Salt Stress Tolerance in Ulmus pumila
Cited by: 8
Author(s): Panfei Chen, Peng Liu, Quanfeng Zhang, Chenhao Bu, Chunfeng Lu, Sudhakar Srivastava, Deqiang Zhang, Yun‐Chun Song
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-53052-1

Products of Chemoenzymatic Synthesis Representing MUC1 Tandem Repeat Unit with T-, ST- or STn-antigen Revealed Distinct Specificities of Anti-MUC1 Antibodies
Cited by: 23
Author(s): Yayoi Yoshimura, Kaori Denda-Nagai, Yoshie Takahashi, Izuru Nagashima, H. Shimizu, Toshimitsu Kishimoto, Miki Noji, Shigeyuki Shichino, Yasunori Chiba, Tatsuro Irimura
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12916-020-01741-4

Postpartum plasma metabolomic profile among women with preeclampsia and preterm delivery: implications for long-term health
Cited by: 10
Author(s): Xiumei Hong, Boyang Zhang, Liming Liang, Yan Zhang, Yuelong Ji, Guoying Wang, Hongkai Ji, Clary B. Clish, Irina Burd, Colleen Pearson, Barry Zuckerman, Frank B. Hu, Xiaobin Wang
Software Mentions: 1
Published: almost 6 years ago

10.3390/genes12081254

Pseudogene Transcripts in Head and Neck Cancer: Literature Review and In Silico Analysis
Cited by: 4
Author(s): Juliana Carron, Rafael Della Coletta, Gustavo Jacob Lourenço
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-52883-2

Comprehensive Analysis of the Expression Profiles of Long Non-Coding RNAs with Associated ceRNA Network Involved in the Colon Cancer Staging and Progression
Cited by: 14
Author(s): Man‐Li C. Wu, Wenliang Li, Fengchang Huang, Jing Sun, Kang ping Li, Jiandong Shi, Jingyu Yang, Jianfang Li, Yanhan Li, Ningzhu Hu, Yunzhang Hu
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12943-015-0350-0

Correlations between immune response and vascularization qRT-PCR gene expression clusters in squamous cervical cancer
Cited by: 36
Author(s): Simone Punt, Jeanine J. Houwing-Duistermaat, Iris A. Schulkens, Victor L. Thijssen, Elisabeth M. Osse, Cornelis D. de Kroon, Arjan W. Griffioen, Gert Jan Fleuren, Arko Gorter, Ekaterina S. Jordanova
Software Mentions: 1
Published: over 11 years ago

10.18632/oncotarget.17023

Prognosis of stage III colorectal carcinomas with FOLFOX adjuvant chemotherapy can be predicted by molecular subtype
Cited by: 33
Author(s): Yu-Jin Kwon, Min Hee Park, Mi Jang, SeongJu Yun, Won Kyu Kim, Sora Kim, Soonmyung Paik, Hyun Jung Lee, Suck Joon Hong, Tae Il Kim, Byung-Soh Min, Hoguen Kim
Software Mentions: 1
Published: over 9 years ago

10.1155/2021/5533483

Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
Cited by: 3
Author(s): Zhiqiang Wang, Zhongjun Ding, Yan Guan, Chunhui Liu, Linjun Wang, Wen-Sheng Shan, Jie Yang
Software Mentions: 1
Published: over 5 years ago

10.1186/s12263-019-0639-5

Weighted gene co-expression network analysis to explain the relationship between plasma total carotenoids and lipid profile
Cited by: 9
Author(s): Bénédicte L. Tremblay, Frédéric Guénard, Benoı̂t Lamarche, Louis Pérusse, Marie‐Claude Vohl
Software Mentions: 1
Published: over 7 years ago

10.1186/s12263-021-00697-1

Vegetarian diet duration’s influence on women’s gut environment
Cited by: 3
Author(s): Xinqi Deng, Jiangtao Si, Yonglong Qu, Jie Li, Yingkun He, Chun-Guo Wang, Yuping Zhang
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-019-54943-z

Water-soluble phosphorus contributes significantly to shaping the community structure of rhizospheric bacteria in rocky desertification areas
Cited by: 9
Author(s): Jinge Xie, Wei Xue, Cong Liu, Zongqiang Yan, Dong Li, Guoqiang Li, Xiwen Chen, Defu Chen
Software Mentions: 1
Published: almost 7 years ago

Projects: cran: WGCNA

Science Score: 85/100

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Papers Mentioning WGCNA 3,479