cran: WGCNA | Projects | Ecosyste.ms: Papers

10.3389/fbioe.2020.00177

Investigation of miRNA and mRNA Co-expression Network in Ependymoma
Cited by: 12
Author(s): Feili Liu, Hang Dong, Zi Mei, Tao Huang
Software Mentions: 1
Published: over 6 years ago

Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System
Cited by: 67
Author(s): Collin M. Timm, Dale A. Pelletier, Sara Jawdy, Lee E. Gunter, Jeremiah A. Henning, Nancy L. Engle, Jayde A. Aufrecht, Emily Gee, Intawat Nookaew, Zamin K. Yang, Tse Yuan S Lu, Timothy J. Tschaplinski, Mitchel J. Doktycz, Gerald A. Tuskan, David J. Weston
Software Mentions: 1
Published: over 10 years ago

10.3390/ijms22031020

DNA Methylation Analysis Identifies Patterns in Progressive Glioma Grades to Predict Patient Survival
Cited by: 13
Author(s): Jing Yin Weng, Nicole Salazar
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2021.679629

Transcriptome Analysis of Resistance to Fusarium Wilt in Mung Bean (Vigna radiata L.)
Cited by: 6
Author(s): Yuan‐Jen Chang, Feifei Sun, Shufeng Sun, Lanfen Wang, Jing Wu, Zhendong Zhu
Software Mentions: 1
Published: about 5 years ago

10.3389/fbioe.2021.651895

Functional Diversity Facilitates Stability Under Environmental Changes in an Outdoor Microalgal Cultivation System
Cited by: 8
Author(s): Lina Mattsson, Eva Sörenson, Eric Capo, Hanna Farnelid, Maurice Hirwa, Martin Olofsson, Fredrik Svensson, Elin Lindehoff, Catherine Legrand
Software Mentions: 1
Published: over 5 years ago

10.3389/fnagi.2018.00259

Gene Expression Analysis Reveals Novel Gene Signatures Between Young and Old Adults in Human Prefrontal Cortex
Cited by: 25
Author(s): Huanming Yang, Pan Jiang, Ying Xin, Xiang-Nan Mi, Jiahui Wang, Qin Gao, Hongyu Luo
Software Mentions: 1
Published: about 8 years ago

10.3389/fnagi.2017.00166

Dissecting the Molecular Mechanisms of Neurodegenerative Diseases through Network Biology
Cited by: 54
Author(s): José A. Santiago, Virginie Bottero, Judith A. Potashkin
Software Mentions: 1
Published: over 9 years ago

10.1186/s12864-018-5098-7

Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density
Cited by: 36
Author(s): Amy Ellison, Tamsyn M. Uren Webster, Olivier Rey, Carlos García de Leániz, Sofía Consuegra, Pablo Orozco‐terWengel, Joanne Cable
Software Mentions: 1
Published: almost 8 years ago

10.3389/fnagi.2016.00171

A Systems View of the Differences between APOE ε4 Carriers and Non-carriers in Alzheimer’s Disease
Cited by: 12
Author(s): Shan Jiang, Ling Tang, Na Zhao, Wanling Yang, Yu Qiu, Hongzhuan Chen
Software Mentions: 1
Published: about 10 years ago

10.1186/s12864-019-6418-2

De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)
Cited by: 8
Author(s): Ying Liu, Chunxia Zhang, Kebin Yang, Jingjing Shi, Yulong Ding, Zhimin Gao
Software Mentions: 1
Published: almost 7 years ago

10.3390/foods10020391

Transcriptome and Metabolome Dynamics Explain Aroma Differences between Green and Red Prickly Ash Fruit
Cited by: 24
Author(s): Xitong Fei, Yichen Qi, Yu Li, Shujie Wang, Hu Hong, Anzhi Wei
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2018.01155

Shedding Light on Chemically Mediated Tri-Trophic Interactions: A 1H-NMR Network Approach to Identify Compound Structural Features and Associated Biological Activity
Cited by: 10
Author(s): Lora A. Richards, Celso José Bruno de Oliveira, Lee A. Dyer, Arran Rumbaugh, Federico Urbano-Muñoz, Ian S. Wallace, Craig D. Dodson, Christopher S. Jeffrey
Software Mentions: 1
Published: about 8 years ago

10.1002/2211-5463.12872

SPC25 may promote proliferation and metastasis of hepatocellular carcinoma via p53
Cited by: 12
Author(s): Fengjuan Chen, Ka Zhang, Yilin Huang, Fang Luo, Kunpeng Hu, Qing-Qing Cai
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2017.00398

Spatiotemporal Transcriptome Analysis Provides Insights into Bicolor Tepal Development in Lilium “Tiny Padhye”
Cited by: 39
Author(s): Liang Xu, Panpan Yang, Yue Feng, Hua Xu, Yuwei Cao, Yuchao Tang, Suxia Yuan, Xinyan Li, Jun Ming
Software Mentions: 1
Published: over 9 years ago

10.1002/2211-5463.13056

DNA methylation subtypes for ovarian cancer prognosis
Cited by: 10
Author(s): Lili Yin, Ningning Zhang
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22042079

Dysfunctional Gut Microbiome Networks in Childhood IgE-Mediated Food Allergy
Cited by: 24
Author(s): Khui Hung Lee, Jing Guo, Yong Song, Amir Ariff, Michael O’Sullivan, Belinda J. Hales, Benjamin J. Mullins, Guicheng Zhang
Software Mentions: 1
Published: over 5 years ago

10.3389/fpsyt.2019.00706

Integrated Analysis of Brain Transcriptome Reveals Convergent Molecular Pathways in Autism Spectrum Disorder
Cited by: 12
Author(s): Xiaodan Li, Yuncong Zhang, Luxi Wang, Yunqing Lin, Zhaomin Gao, Xiaolei Zhan, Yan Huang, Chongde Sun, Dong Wang, Shuang Liang, Lijie Wu
Software Mentions: 1
Published: almost 7 years ago

10.1155/2012/120350

Molecular Mechanisms of Same TCM Syndrome for Different Diseases and Different TCM Syndrome for Same Disease in Chronic Hepatitis B and Liver Cirrhosis
Cited by: 27
Author(s): Zhixin Guo, Shuhao Yu, Yan Guan, Ying-Ya Li, Yi‐Yu Lu, Hui Zhang, Shi‐Bing Su
Software Mentions: 1
Published: over 14 years ago

10.1155/2021/6522191

Application of Multigroup Technology in Non-Small-Cell Lung Cancer with Qi Stagnation and Blood Stasis Syndrome
Cited by: 0
Author(s): Guan-Jun Ma, Qian Xiang, Zhuo Chen, Shasha Chen, Aiqin Zhang
Software Mentions: 1
Published: about 5 years ago

10.3389/fpsyt.2020.543893

Non-Coding RNAs in Psychiatric Disorders and Suicidal Behavior
Cited by: 38
Author(s): Yuta Yoshino, Yogesh K. Dwivedi
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpsyt.2020.580307

A Weighted Gene Co-expression Network Analysis Reveals lncRNA Abnormalities in the Peripheral Blood Associated With Ultra-High-Risk for Psychosis
Cited by: 2
Author(s): Yan Ren, Wei Li, Sha Li, Zhi Li, Jiaying Wang, Hong Yang, Yong Xu
Software Mentions: 1
Published: over 5 years ago

10.3389/fpsyt.2021.581093

Gene Expression Differences Between Young Adults Based on Trauma History and Post-traumatic Stress Disorder
Cited by: 0
Author(s): Kaitlin Bountress, Vladimir I. Vladimirov, Gowon O. McMichael, Zachary N. Taylor, Gary Hardiman, Dongjun Chung, Zachary W. Adams, Carla Kmett Danielson, Ananda B. Amstadter
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-018-5358-6

Transcriptomic profiling reveals molecular regulation of seasonal reproduction in Tibetan highland fish, Gymnocypris przewalskii
Cited by: 20
Author(s): Fei Tian, Sijia Liu, Jianquan Shi, Hongfang Qi, Kai Zhao, Bin Xie
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-14-825

Genome-wide transcriptional analysis of T cell activation reveals differential gene expression associated with psoriasis
Cited by: 24
Author(s): Núria Palau, Antonio Julià, Carlos Ferrándiz, Lluís Puig, Eduardo Fonseca, Enrique Vega Fernández, María López-Lasanta, Raül Tortosa, Sara Marsal
Software Mentions: 1
Published: almost 13 years ago

10.2217/epi-2016-0017

How to make DNA methylome wide association studies more powerful
Cited by: 27
Author(s): Xinyi Lin, Sheila J. Barton, Joanna D. Holbrook
Software Mentions: 1
Published: about 10 years ago

10.1186/1756-8935-6-28

Epigenetic coordination of signaling pathways during the epithelial-mesenchymal transition
Cited by: 42
Author(s): Marcin Cieślik, Stephen A. Hoang, Natalya Baranova, Sanjay V. Chodaparambil, Manish Kumar, David F. Allison, Xiaojiang Xu, J. Jacob Wamsley, Lisa G. Gray, David R. Jones, Marty W. Mayo, Stefan Bekiranov
Software Mentions: 1
Published: about 13 years ago

10.1186/s13072-019-0257-x

Retinal-input-induced epigenetic dynamics in the developing mouse dorsal lateral geniculate nucleus
Cited by: 4
Author(s): Jianlin He, Xiguang Xu, Aboozar Monavarfeshani, Sharmi Banerjee, Michael A. Fox, Hehuang Xie
Software Mentions: 1
Published: over 7 years ago

10.1186/s12983-019-0336-7

Gene expression vs. sequence divergence: comparative transcriptome sequencing among natural Rhinolophus ferrumequinum populations with different acoustic phenotypes
Cited by: 12
Author(s): Hanbo Zhao, Hui Wang, Tong Liu, Sen Liu, Longru Jin, Xiaobin Huang, Wentao Dai, Keping Sun, Jiang Feng
Software Mentions: 1
Published: almost 7 years ago

10.1002/ece3.6206

Transcriptional analyses reveal the molecular mechanism governing shade tolerance in the invasive plant Solidago canadensis
Cited by: 8
Author(s): Miao Wu, Zeyu Li, Jianbo Wang
Software Mentions: 1
Published: over 6 years ago

10.1007/s10142-018-0607-y

Comparison of gene co-networks reveals the molecular mechanisms of the rice (Oryza sativa L.) response to Rhizoctonia solani AG1 IA infection
Cited by: 15
Author(s): Jinfeng Zhang, Wenjuan Zhao, Rong Fu, Chunyan Fu, Lingxia Wang, Huainian Liu, Shuangcheng Li, Qi Deng, Shiquan Wang, Jun Zhu, Yueyang Liang, Ping Li, Aiping Zheng
Software Mentions: 1
Published: over 8 years ago

10.1007/s10142-019-00678-z

Global transcriptome analysis uncovers the gene co-expression regulation network and key genes involved in grain development of wheat (Triticum aestivum L.)
Cited by: 12
Author(s): Qing Chi, Lijian Guo, Meng Ma, Lijian Zhang, Hude Mao, Baowei Wu, Xiangli Liu, Ricardo H. Ramírez-González, Cristóbal Uauy, R. Appels, Huixian Zhao
Software Mentions: 1
Published: over 7 years ago

10.1534/g3.112.004788

Systems-Level Analysis of Genome-Wide Association Data
Cited by: 43
Author(s): Charles R. Farber
Software Mentions: 1
Published: over 13 years ago

10.1002/ece3.7024

Comparative transcriptomics reveals the molecular genetic basis of pigmentation loss in Sinocyclocheilus cavefishes
Cited by: 13
Author(s): Chun‐Qing Li, Hongyu Chen, Yinchen Zhao, Shanyuan Chen, Hang Xiao
Software Mentions: 1
Published: almost 6 years ago

10.1534/g3.116.033894

Preservation Analysis of Macrophage Gene Coexpression Between Human and Mouse Identifies PARK2 as a Genetically Controlled Master Regulator of Oxidative Phosphorylation in Humans
Cited by: 12
Author(s): Veronica Codoni, Yuna Blum, Mete Civelek, Carole Proust, Oscar Franzén, Johan Björkegren, Wilfried Le Goff, François Cambien, Aldons J. Lusis, David‐Alexandre Trégouët
Software Mentions: 1
Published: almost 10 years ago

10.1186/s13637-017-0059-z

From protein-protein interactions to protein co-expression networks: a new perspective to evaluate large-scale proteomic data
Cited by: 71
Author(s): Danila Vella, Italo Zoppis, Giovanni Mauri, Pierluigi Mauri, Dario Di Silvestre
Software Mentions: 1
Published: over 9 years ago

10.1186/s13637-016-0052-y

Graph reconstruction using covariance-based methods
Cited by: 9
Author(s): Nurgazy Sulaimanov, Heinz Koeppl
Software Mentions: 1
Published: almost 10 years ago

10.1534/g3.117.042408

A Systemic Analysis of Transcriptomic and Epigenomic Data To Reveal Regulation Patterns for Complex Disease
Cited by: 6
Author(s): Chao Xu, Jigang Zhang, Dongdong Lin, Lan Zhang, Hui Shen, Hong‐Wen Deng
Software Mentions: 1
Published: about 9 years ago

10.1534/g3.117.043679

Genome-Wide Sequence and Expression Analysis of the NAC Transcription Factor Family in Polyploid Wheat
Cited by: 52
Author(s): Philippa Borrill, Sophie A Harrington, Cristóbal Uauy
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-020-6654-5

Transcriptomic profiling of Solanum peruvianum LA3858 revealed a Mi-3-mediated hypersensitive response to Meloidogyne incognita
Cited by: 11
Author(s): Chong Du, Jingbin Jiang, He Zhang, Tingting Zhao, Huanhuan Yang, Dongye Zhang, Zhentong Zhao, Xiangyang Xu, Jin-Fu Li
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-11-161

Functional annotation of novel lineage-specific genes using co-expression and promoter analysis
Cited by: 8
Author(s): Charu G. Kumar, Robin E. Everts, Juan J. Loor, Harris A. Lewin
Software Mentions: 1
Published: over 16 years ago

10.1007/s13167-019-00175-0

Identification of clinical trait–related lncRNA and mRNA biomarkers with weighted gene co-expression network analysis as useful tool for personalized medicine in ovarian cancer
Cited by: 88
Author(s): Na Li, Xianquan Zhan
Software Mentions: 1
Published: about 7 years ago

10.1242/dmm.029074

Temporal analysis of hippocampal CA3 gene co-expression networks in a rat model of febrile seizures
Cited by: 10
Author(s): Hátylas Azevedo, Nathália Amato Khaled, Paula Santos, Fernanda Bernardi Bertonha, Carlos Alberto Moreira-Filho
Software Mentions: 1
Published: over 9 years ago

10.1242/dmm.048298

NODAL/TGFβ signalling mediates the self-sustained stemness induced by PIK3CAH1047R homozygosity in pluripotent stem cells
Cited by: 4
Author(s): Ralitsa R. Madsen, James Longden, Rachel Knox, Xavier Robin, Franziska Völlmy, Kenneth G. MacLeod, Larissa S. Moniz, Neil O. Carragher, Rune Linding, Bart Vanhaesebroeck, Robert K. Semple
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.120.401275

Dissecting the Genetic Architecture of Cystatin C in Diversity Outbred Mice
Cited by: 9
Author(s): Md. Nazmul Huda, Melissa VerHague, Jody Albright, Tangi Smallwood, Timothy A. Bell, Excel Que, Darla R. Miller, Baback Roshanravan, Hooman Allayee, Fernando P Pardo Manuel De Villena, Brian J. Bennett
Software Mentions: 1
Published: about 6 years ago

10.1007/s00125-018-4708-x

Innate immune activity as a predictor of persistent insulin secretion and association with responsiveness to CTLA4-Ig treatment in recent-onset type 1 diabetes
Cited by: 30
Author(s): Susanne M. Cabrera, Samuel Engle, Mary L. Kaldunski, Jia Song, Rhonda Geoffrey, Pippa Simpson, Anikó Szabó, Cate Speake, Carla J. Greenbaum, Yi-Guang Chen, Martin J. Hessner
Software Mentions: 1
Published: about 8 years ago

10.1534/g3.120.401067

NetExtractor: Extracting a Cerebellar Tissue Gene Regulatory Network Using Differentially Expressed High Mutual Information Binary RNA Profiles
Cited by: 2
Author(s): Benafsh Husain, Allison R Hickman, Yuqing Hang, Benjamin T. Shealy, Karan Sapra, Frank Alexander Feltus
Software Mentions: 1
Published: about 6 years ago

10.1093/dnares/dsaa006

Integrating transcriptome and metabolome reveals molecular networks involved in genetic and environmental variation in tobacco
Cited by: 20
Author(s): Pingping Li, Jianxun Luo, Qingyuan Zheng, Qiansi Chen, Zheyu Niu, Shengchun Xu, Yalong Xu, Lifeng Jin, Guoyun Xu, Xin Lü, Guowang Xu, Gangjun Wang, Jianfeng Shao, Haiming Xu, Peijian Cao, Huina Zhou, Xusheng Wang
Software Mentions: 1
Published: over 6 years ago

10.1007/s10120-018-00911-x

Prognostic and clinicopathological significance of long noncoding RNA CTD-2510F5.4 in gastric cancer
Cited by: 30
Author(s): Zhe Wang, Baoli Qin
Software Mentions: 1
Published: over 7 years ago

10.1093/dnares/dsz016

Phased genome sequence of an interspecific hybrid flowering cherry, ‘Somei-Yoshino’ (Cerasus × yedoensis)
Cited by: 44
Author(s): Kenta Shirasawa, Tomoya Esumi, Hideki Hirakawa, Hideyuki Tanaka, Akihiro Itai, Andrea Ghelfi, Hideki Nagasaki, Sachiko Isobe
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms22094410

Gene Coexpression Network Analysis Indicates that Hub Genes Related to Photosynthesis and Starch Synthesis Modulate Salt Stress Tolerance in Ulmus pumila
Cited by: 8
Author(s): Panfei Chen, Peng Liu, Quanfeng Zhang, Chenhao Bu, Chunfeng Lu, Sudhakar Srivastava, Deqiang Zhang, Yun‐Chun Song
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-5777-z

Differential expression of innate and adaptive immune genes in the survivors of three gibel carp gynogenetic clones after herpesvirus challenge
Cited by: 17
Author(s): Wei-Jia Lu, Fan-Xiang Gao, Yan Wang, Qi-Ya Zhang, Zhi Li, Xiaojuan Zhang, Li Zhou, Jian‐Fang Gui
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-14-112

Cross-species transcriptional network analysis reveals conservation and variation in response to metal stress in cyanobacteria
Cited by: 31
Author(s): Jiangxin Wang, Gang Wu, Lei Chen, Weiwen Zhang
Software Mentions: 1
Published: over 13 years ago

10.1093/dnares/dsu024

Associative Transcriptomics Study Dissects the Genetic Architecture of Seed Glucosinolate Content in Brassica napus
Cited by: 60
Author(s): Guangyuan Lu, Andrea L. Harper, Martin Trick, Colin Morgan, F C Fråser, Carmel M. O’Neill, Ian Bancroft
Software Mentions: 1
Published: about 12 years ago

10.1007/s11897-021-00504-3

Single-Cell RNA Sequencing of the Adult Mammalian Heart—State-of-the-Art and Future Perspectives
Cited by: 9
Author(s): Monika M Gladka
Software Mentions: 1
Published: over 5 years ago

10.1038/s41438-020-0279-3

Transcriptome profiles reveal that gibberellin-related genes regulate weeping traits in crape myrtle
Cited by: 14
Author(s): Suzhen Li, Tangchun Zheng, Xiaokang Zhuo, Zhuojiao Li, Lulu Li, Ping Li, Like Qiu, Huitang Pan, Jia Wang, Tangren Cheng, Qixiang Zhang
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms22095001

Integrating Transcriptome and Coexpression Network Analyses to Characterize Salicylic Acid- and Jasmonic Acid-Related Genes in Tolerant Poplars Infected with Rust
Cited by: 8
Author(s): Qiaoli Chen, Ruizhi Zhang, Danlei Li, Feng Wang
Software Mentions: 1
Published: over 5 years ago

10.2174/138920209788921029

One Decade Later: What has Gene Expression Profiling Told us About Neuronal Cell Types, Brain Function and Disease?
Cited by: 3
Author(s): Elizabeth Díaz
Software Mentions: 1
Published: about 17 years ago

10.1186/s13075-020-02248-2

Identification of novel genes associated with dysregulation of B cells in patients with primary Sjögren’s syndrome
Cited by: 22
Author(s): Jun Inamo, Katsuya Suzuki, Masaru Takeshita, Yoshiaki Kassai, Maiko Takiguchi, Rina Kurisu, Yuumi Okuzono, Shinya Tasaki, Akihiko Yoshimura, Tsutomu Takeuchi
Software Mentions: 1
Published: about 6 years ago

10.1007/s12170-012-0280-y

Systems Biology Approaches and Applications in Obesity, Diabetes, and Cardiovascular Diseases
Cited by: 47
Author(s): Qingying Meng, Ville-Petteri Mäkinen, Helen Luk, Xia Yang
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-15-1015

Key regulators in prostate cancer identified by co-expression module analysis
Cited by: 23
Author(s): Junfeng Jiang, Peilin Jia, Zhongming Zhao, Bairong Shen
Software Mentions: 1
Published: almost 12 years ago

10.1155/2021/5533483

Altered Gene Expression in the Testis of Infertile Patients with Nonobstructive Azoospermia
Cited by: 3
Author(s): Zhiqiang Wang, Zhongjun Ding, Yan Guan, Chunhui Liu, Linjun Wang, Wen-Sheng Shan, Jie Yang
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2164-14-13

Genetic architecture of gene expression in the chicken
Cited by: 11
Author(s): Dragana Stanley, Nathan S. Watson-Haigh, Christopher Cowled, Robert J. Moore
Software Mentions: 1
Published: over 13 years ago

10.3390/ijms22147649

Epigenetic Changes in Gestational Diabetes Mellitus
Cited by: 11
Author(s): Dominik Dłuski, Ewa Wolińska, Maciej Skrzypczak
Software Mentions: 1
Published: about 5 years ago

10.1038/s41438-021-00653-5

Genomic and transcriptomic analyses of Citrus sinensis varieties provide insights into Valencia orange fruit mastication trait formation
Cited by: 8
Author(s): Guizhi Feng, Xiu Ai, Hualin Yi, Wen‐Wu Guo, Juxun Wu
Software Mentions: 1
Published: almost 5 years ago

10.1186/s12864-015-1398-3

Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses
Cited by: 79
Author(s): Zening Jin, Bobin Liu, Jianbo Li, Li Zhang, Yan Wang, Huanquan Zheng, Mengzhu Lu, Jun Chen
Software Mentions: 1
Published: over 11 years ago

10.3390/ijms22158128

Transcriptome Analysis of Flower Development and Mining of Genes Related to Flowering Time in Tomato (Solanum lycopersicum)
Cited by: 11
Author(s): Hexuan Wang, Yahui Yang, Yiyao Zhang, Tingting Zhao, Jingbin Jiang, Jin-Fu Li, Xiangyang Xu, Huanhuan Yang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41438-019-0225-4

Tea plant genomics: achievements, challenges and perspectives
Cited by: 90
Author(s): Enhua Xia, Wei Tong, Qiong Wu, Wei Shu, Jian Zhao, Zhengzhu Zhang, Chaoling Wei, Xiaochun Wan
Software Mentions: 1
Published: over 6 years ago

10.1155/2021/5584684

RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification
Cited by: 0
Author(s): Lei Wang, Juntao Li, Juanfang Liu, Mingming Chang
Software Mentions: 1
Published: over 5 years ago

10.1038/s42003-021-02421-6

Metabolomic signatures associated with depression and predictors of antidepressant response in humans: A CAN-BIND-1 report
Cited by: 11
Author(s): Giorgia Caspani, Gustavo Turecki, Raymond W. Lam, Roumen Milev, Benício N. Frey, Glenda MacQueen, Daniel J. Müller, Susan Rotzinger, Sidney H. Kennedy, Jane A. Foster, Jonathan R. Swann
Software Mentions: 1
Published: about 5 years ago

10.1038/s41438-020-0245-0

A temporal gene expression map of Chrysanthemum leaves infected with Alternaria alternata reveals different stages of defense mechanisms
Cited by: 21
Author(s): Ye Liu, Jingjing Xin, Lina Liu, Aiping Song, Zhiyong Guan, Weimin Fang, Fadi Chen
Software Mentions: 1
Published: over 6 years ago

10.1038/s41438-021-00591-2

Integrative iTRAQ-based proteomic and transcriptomic analysis reveals the accumulation patterns of key metabolites associated with oil quality during seed ripening of Camellia oleifera
Cited by: 28
Author(s): Zhouchen Ye, Jing Yu, Wuping Yan, Junfeng Zhang, Dongmei Yang, Guanglong Yao, Zijin Liu, Yougen Wu, Xilin Hou
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-019-6025-2

Transcriptome-wide association study and eQTL analysis to assess the genetic basis of bulb-yield traits in garlic (Allium sativum)
Cited by: 7
Author(s): Siyuan Zhu, Xiaojun Chen, Xia Liu, Jian Zhao, Touming Liu
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-019-5778-y

The adaptation strategies of Herpetospermum pedunculosum (Ser.) Baill at altitude gradient of the Tibetan plateau by physiological and metabolomic methods
Cited by: 21
Author(s): Yong Zhao, Frank F. Xu, Jia Liu, Fang Guan, Quan Hong, Fanjuan Meng
Software Mentions: 1
Published: over 7 years ago

10.1038/s41438-021-00490-6

The chromosome-based lavender genome provides new insights into Lamiaceae evolution and terpenoid biosynthesis
Cited by: 33
Author(s): Jingrui Li, Yiming Wang, Yanmei Dong, Wenying Zhang, Di Wang, Hongtong Bai, Kui Li, Hui Li, Lei Shi
Software Mentions: 1
Published: over 5 years ago

10.1038/s42003-018-0271-8

Regulation of RNA editing by RNA-binding proteins in human cells
Cited by: 89
Author(s): Giovanni Quinones-Valdez, Stephen Tran, Hyun-Ik Jun, Jae Hoon Bahn, Ei-Wen Yang, Lijun Zhan, Anneke Brümmer, Xintao Wei, Eric L. Van Nostrand, Gabriel A. Pratt, G Yeo, Brenton R. Graveley, Xinshu Xiao
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms22168369

Transcriptomic Analysis Reveals Key Genes Involved in Oil and Linoleic Acid Biosynthesis during Artemisia sphaerocephala Seed Development
Cited by: 4
Author(s): Shuzhen Nan, Lijing Zhang, Xiaowei Hu, Xiumei Miao, Xing Han, Hua Fu
Software Mentions: 1
Published: about 5 years ago

10.1002/iid3.414

Bioinformatics analysis of the prognosis and biological significance of VCAN in gastric cancer
Cited by: 11
Author(s): Xiaoyan Huang, Jinjian Liu, Xiong Liu, Yao‐hui Wang, Wei Xiang
Software Mentions: 1
Published: over 5 years ago

10.1002/iid3.436

Genomic analysis of host gene responses to cerebral Plasmodium falciparum malaria
Cited by: 4
Author(s): Ke Li, Wei Han, Hongfeng Zhang, Xiaoxiao Zhao, Yongji Lai, Fangfang Liu
Software Mentions: 1
Published: over 5 years ago

Projects: cran: WGCNA

Science Score: 85/100

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Papers Mentioning WGCNA 3,479