cran: WGCNA | Projects | Ecosyste.ms: Papers

10.3389/fgene.2021.615284

Comparative Analyses of Full-Length Transcriptomes Reveal Gnetum luofuense Stem Developmental Dynamics
Cited by: 7
Author(s): Chen Hou, Huiming Lian, Yanling Cai, Yingli Wang, Dongcheng Liang, Boxiang He
Software Mentions: 1
Published: over 5 years ago

10.3389/fgene.2021.680120

Transcriptome Co-expression Network Analysis Identifies Key Genes Regulating Conchosporangia Maturation of Pyropia haitanensis
Cited by: 3
Author(s): Yi-Sheng Lin, Kai Xu, Yan Xu, Dehua Ji, Changsheng Chen, Wenlei Wang, Chaotian Xie
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-018-5098-7

Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density
Cited by: 36
Author(s): Amy Ellison, Tamsyn M. Uren Webster, Olivier Rey, Carlos García de Leániz, Sofía Consuegra, Pablo Orozco‐terWengel, Joanne Cable
Software Mentions: 1
Published: about 8 years ago

10.3389/fgene.2021.695625

Translational Proteomics Analysis of Anthracycline-Induced Cardiotoxicity From Cardiac Microtissues to Human Heart Biopsies
Cited by: 11
Author(s): Nhan Nguyen, Tancredo Augusto Feitosa de Souza, Marcha Verheijen, Hans Gmuender, Nathalie Selevsek, Ralph Schlapbach, Jos Kleinjans, Danyel Jennen
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-6418-2

De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae)
Cited by: 8
Author(s): Ying Liu, Chunxia Zhang, Kebin Yang, Jingjing Shi, Yulong Ding, Zhimin Gao
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2019.01359

Transcriptome Changes of Mycobacterium marinum in the Process of Resuscitation From Hypoxia-Induced Dormancy
Cited by: 6
Author(s): Jun Jiang, Lin Chen, Junli Zhang, Yuchen Wang, Lianfang Shen, Kun Yang, Wenjun Xiao, Li Yao, Lu Zhang, Jun Liu
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2018.01155

Shedding Light on Chemically Mediated Tri-Trophic Interactions: A 1H-NMR Network Approach to Identify Compound Structural Features and Associated Biological Activity
Cited by: 10
Author(s): Lora A. Richards, Celso José Bruno de Oliveira, Lee A. Dyer, Arran Rumbaugh, Federico Urbano-Muñoz, Ian S. Wallace, Craig D. Dodson, Christopher S. Jeffrey
Software Mentions: 1
Published: about 8 years ago

10.3389/fendo.2020.570604

Immune Cell Confrontation in the Papillary Thyroid Carcinoma Microenvironment
Cited by: 56
Author(s): Zhenyu Xie, Xin Li, Yuzhen He, Song Wu, Shiyue Wang, Jing Sun, Yuchen He, Yu Lun, Jian Zhang
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2017.00398

Spatiotemporal Transcriptome Analysis Provides Insights into Bicolor Tepal Development in Lilium “Tiny Padhye”
Cited by: 39
Author(s): Liang Xu, Panpan Yang, Yue Feng, Hua Xu, Yuwei Cao, Yuchao Tang, Suxia Yuan, Xinyan Li, Jun Ming
Software Mentions: 1
Published: over 9 years ago

10.3389/fendo.2021.666393

METTL3 Is Involved in the Development of Graves’ Disease by Inducing SOCS mRNA m6A Modification
Cited by: 6
Author(s): Ronghua Song, Peng Du, Chaoqun Gao, Xuerong Liu, Jinan Zhang
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms22042079

Dysfunctional Gut Microbiome Networks in Childhood IgE-Mediated Food Allergy
Cited by: 24
Author(s): Khui Hung Lee, Jing Guo, Yong Song, Amir Ariff, Michael O’Sullivan, Belinda J. Hales, Benjamin J. Mullins, Guicheng Zhang
Software Mentions: 1
Published: over 5 years ago

10.3389/fpsyt.2019.00706

Integrated Analysis of Brain Transcriptome Reveals Convergent Molecular Pathways in Autism Spectrum Disorder
Cited by: 12
Author(s): Xiaodan Li, Yuncong Zhang, Luxi Wang, Yunqing Lin, Zhaomin Gao, Xiaolei Zhan, Yan Huang, Chongde Sun, Dong Wang, Shuang Liang, Lijie Wu
Software Mentions: 1
Published: almost 7 years ago

10.3389/fendo.2020.00272

Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study
Cited by: 15
Author(s): Y.N. Ning, Ge Yang, Yangchun Chen, Xue Qiang Zhao, Hongyan Qian, Yuan Liu, Shiju Chen, Guixiu Shi
Software Mentions: 1
Published: over 6 years ago

10.3389/fendo.2018.00500

The Implications of Vitamin D Status During Pregnancy on Mother and her Developing Child
Cited by: 79
Author(s): Carol L. Wagner, Bruce W. Hollis
Software Mentions: 1
Published: about 8 years ago

10.3389/fpsyt.2020.543893

Non-Coding RNAs in Psychiatric Disorders and Suicidal Behavior
Cited by: 38
Author(s): Yuta Yoshino, Yogesh K. Dwivedi
Software Mentions: 1
Published: about 6 years ago

10.3389/fpsyt.2020.580307

A Weighted Gene Co-expression Network Analysis Reveals lncRNA Abnormalities in the Peripheral Blood Associated With Ultra-High-Risk for Psychosis
Cited by: 2
Author(s): Yan Ren, Wei Li, Sha Li, Zhi Li, Jiaying Wang, Hong Yang, Yong Xu
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpsyt.2021.581093

Gene Expression Differences Between Young Adults Based on Trauma History and Post-traumatic Stress Disorder
Cited by: 0
Author(s): Kaitlin Bountress, Vladimir I. Vladimirov, Gowon O. McMichael, Zachary N. Taylor, Gary Hardiman, Dongjun Chung, Zachary W. Adams, Carla Kmett Danielson, Ananda B. Amstadter
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-018-5358-6

Transcriptomic profiling reveals molecular regulation of seasonal reproduction in Tibetan highland fish, Gymnocypris przewalskii
Cited by: 20
Author(s): Fei Tian, Sijia Liu, Jianquan Shi, Hongfang Qi, Kai Zhao, Bin Xie
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2164-14-825

Genome-wide transcriptional analysis of T cell activation reveals differential gene expression associated with psoriasis
Cited by: 24
Author(s): Núria Palau, Antonio Julià, Carlos Ferrándiz, Lluís Puig, Eduardo Fonseca, Enrique Vega Fernández, María López-Lasanta, Raül Tortosa, Sara Marsal
Software Mentions: 1
Published: almost 13 years ago

10.3389/fncel.2020.595607

Comprehensive Profiling of Gene Expression in the Cerebral Cortex and Striatum of BTBRTF/ArtRbrc Mice Compared to C57BL/6J Mice
Cited by: 8
Author(s): Shota Mizuno, Jun Na Hirota, Chiaki Ishii, Hirohide Iwasaki, Yoshitake Sano, Teiichi Furuichi
Software Mentions: 1
Published: almost 6 years ago

10.3389/fcimb.2019.00346

Identification of Gut Microbiota and Metabolites Signature in Patients With Irritable Bowel Syndrome
Cited by: 33
Author(s): Shengtao Zhu, Si Liu, Hengcun Li, Zheng Zhang, Qian Zhang, Lei Chen, Yu Zhao, Yang Chen, Jiafeng Gu, Li Min, Shutian Zhang
Software Mentions: 1
Published: almost 7 years ago

10.3389/fcimb.2018.00307

Gene Expression Signatures Can Aid Diagnosis of Sexually Transmitted Infection-Induced Endometritis in Women
Cited by: 15
Author(s): Xiaojing Zheng, Catherine M. O’Connell, Wujuan Zhong, Taylor B. Poston, Harold C. Wiesenfeld, Sharon L. Hillier, Maria Trent, Charlotte A. Gaydos, George C. Tseng, Brandie D. Taylor, Toni Darville
Software Mentions: 1
Published: about 8 years ago

10.1186/s12983-019-0336-7

Gene expression vs. sequence divergence: comparative transcriptome sequencing among natural Rhinolophus ferrumequinum populations with different acoustic phenotypes
Cited by: 12
Author(s): Hanbo Zhao, Hui Wang, Tong Liu, Sen Liu, Longru Jin, Xiaobin Huang, Wentao Dai, Keping Sun, Jiang Feng
Software Mentions: 1
Published: about 7 years ago

10.3389/fcell.2021.686547

RPL19 Is a Prognostic Biomarker and Promotes Tumor Progression in Hepatocellular Carcinoma
Cited by: 6
Author(s): Benchen Rao, Jianhao Li, Tong Ren, Jing Yang, Guizhen Zhang, Liwen Liu, Ang Li, Mengling Huang, Zhigang Ren, Zujiang Yu
Software Mentions: 1
Published: about 5 years ago

10.1007/s10142-018-0607-y

Comparison of gene co-networks reveals the molecular mechanisms of the rice (Oryza sativa L.) response to Rhizoctonia solani AG1 IA infection
Cited by: 15
Author(s): Jinfeng Zhang, Wenjuan Zhao, Rong Fu, Chunyan Fu, Lingxia Wang, Huainian Liu, Shuangcheng Li, Qi Deng, Shiquan Wang, Jun Zhu, Yueyang Liang, Ping Li, Aiping Zheng
Software Mentions: 1
Published: over 8 years ago

10.1007/s10142-019-00678-z

Global transcriptome analysis uncovers the gene co-expression regulation network and key genes involved in grain development of wheat (Triticum aestivum L.)
Cited by: 12
Author(s): Qing Chi, Lijian Guo, Meng Ma, Lijian Zhang, Hude Mao, Baowei Wu, Xiangli Liu, Ricardo H. Ramírez-González, Cristóbal Uauy, R. Appels, Huixian Zhao
Software Mentions: 1
Published: over 7 years ago

10.1534/g3.112.004788

Systems-Level Analysis of Genome-Wide Association Data
Cited by: 43
Author(s): Charles R. Farber
Software Mentions: 1
Published: almost 14 years ago

10.3389/fcell.2021.653528

Comprehensive Analysis Reveals the Potential Regulatory Mechanism Between Ub–Proteasome System and Cell Cycle in Colorectal Cancer
Cited by: 1
Author(s): Zhiyuan Zhang, Jingwen Chen, Wentao Tang, Qi Sheng Feng, Jiacheng Xu, Ren Li
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.116.033894

Preservation Analysis of Macrophage Gene Coexpression Between Human and Mouse Identifies PARK2 as a Genetically Controlled Master Regulator of Oxidative Phosphorylation in Humans
Cited by: 12
Author(s): Veronica Codoni, Yuna Blum, Mete Civelek, Carole Proust, Oscar Franzén, Johan Björkegren, Wilfried Le Goff, François Cambien, Aldons J. Lusis, David‐Alexandre Trégouët
Software Mentions: 1
Published: about 10 years ago

10.3389/fcell.2021.608367

Sall4 and Myocd Empower Direct Cardiac Reprogramming From Adult Cardiac Fibroblasts After Injury
Cited by: 10
Author(s): Hong Zhao, Yi Zhang, Xinmin Xu, Qixin Sun, Caiqiong Yang, Hao Wang, Junbo Yang, Yang Yang, Xiaochun Yang, Yi Liu, Yang Zhao
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.592616

Functional Gene Expression Differentiation of the Notch Signaling Pathway in Female Reproductive Tract Tissues—A Comprehensive Review With Analysis
Cited by: 9
Author(s): Magdalena Orzechowska, Dorota Anusewicz, Andrzej K. Bednarek
Software Mentions: 1
Published: almost 6 years ago

10.1534/g3.117.042408

A Systemic Analysis of Transcriptomic and Epigenomic Data To Reveal Regulation Patterns for Complex Disease
Cited by: 6
Author(s): Chao Xu, Jigang Zhang, Dongdong Lin, Lan Zhang, Hui Shen, Hong‐Wen Deng
Software Mentions: 1
Published: over 9 years ago

10.1534/g3.117.043679

Genome-Wide Sequence and Expression Analysis of the NAC Transcription Factor Family in Polyploid Wheat
Cited by: 52
Author(s): Philippa Borrill, Sophie A Harrington, Cristóbal Uauy
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-020-6654-5

Transcriptomic profiling of Solanum peruvianum LA3858 revealed a Mi-3-mediated hypersensitive response to Meloidogyne incognita
Cited by: 11
Author(s): Chong Du, Jingbin Jiang, He Zhang, Tingting Zhao, Huanhuan Yang, Dongye Zhang, Zhentong Zhao, Xiangyang Xu, Jin-Fu Li
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2164-11-161

Functional annotation of novel lineage-specific genes using co-expression and promoter analysis
Cited by: 8
Author(s): Charu G. Kumar, Robin E. Everts, Juan J. Loor, Harris A. Lewin
Software Mentions: 1
Published: over 16 years ago

10.3389/fcell.2021.639615

Establishment of Novel DNA Methylation-Based Prostate Cancer Subtypes and a Risk-Predicting Eight-Gene Signature
Cited by: 3
Author(s): Enchong Zhang, Fujisawa Shiori, Oscar YongNan Mu, Jieqian He, Yuntian Ge, Hongliang Wu, Mo Zhang, Yi Song
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2019.00200

The Role of EGFR in Influenza Pathogenicity: Multiple Network-Based Approaches to Identify a Key Regulator of Non-lethal Infections
Cited by: 18
Author(s): Hugh D. Mitchell, Amie J. Eisfeld, Kelly G. Stratton, Natalie C. Heller, Lisa Bramer, Ji Wen, Jason McDermott, Lisa E. Gralinski, Amy C. Sims, Mai Quynh Le, Ralph S. Baric, Yoshihiro Kawaoka, Katrina M. Waters
Software Mentions: 1
Published: about 7 years ago

10.3389/fcell.2020.598660

Construction of a Five-Super-Enhancer-Associated-Genes Prognostic Model for Osteosarcoma Patients
Cited by: 11
Author(s): Zhanbo Ouyang, Guohua Li, Haihong Zhu, Jiaojiao Wang, Tingting Qi, Qiang Qu, Chao Tu, Jian Qu, Qiong Lu
Software Mentions: 1
Published: almost 6 years ago

10.1534/g3.120.401275

Dissecting the Genetic Architecture of Cystatin C in Diversity Outbred Mice
Cited by: 9
Author(s): Md. Nazmul Huda, Melissa VerHague, Jody Albright, Tangi Smallwood, Timothy A. Bell, Excel Que, Darla R. Miller, Baback Roshanravan, Hooman Allayee, Fernando P Pardo Manuel De Villena, Brian J. Bennett
Software Mentions: 1
Published: over 6 years ago

10.3389/fcell.2021.656636

LncRNA Landscape of Coronary Atherosclerosis Reveals Differentially Expressed LncRNAs in Proliferation and Migration of Coronary Artery Smooth Muscle Cells
Cited by: 6
Author(s): Yaqing Zhou, Sheng Zhang, Wenfeng Ji, Xiongkang Gan, Hua Liu, Can Hou, Jiaxin Chen, Yanjun Wang, Shu He, Hongliang Zhou, En-Zhi Jia
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.120.401067

NetExtractor: Extracting a Cerebellar Tissue Gene Regulatory Network Using Differentially Expressed High Mutual Information Binary RNA Profiles
Cited by: 2
Author(s): Benafsh Husain, Allison R Hickman, Yuqing Hang, Benjamin T. Shealy, Karan Sapra, Frank Alexander Feltus
Software Mentions: 1
Published: about 6 years ago

10.3389/fcell.2020.630790

Identification of IL10RA by Weighted Correlation Network Analysis and in vitro Validation of Its Association With Prognosis of Metastatic Melanoma
Cited by: 7
Author(s): Siyuan Cheng, Zhe Li, Wenhao Zhang, Zhiqiang Sun, Zhipeng Fan, Judong Luo, Hui Liu
Software Mentions: 1
Published: over 5 years ago

10.1007/s10120-018-00911-x

Prognostic and clinicopathological significance of long noncoding RNA CTD-2510F5.4 in gastric cancer
Cited by: 30
Author(s): Zhe Wang, Baoli Qin
Software Mentions: 1
Published: almost 8 years ago

10.3389/fcell.2020.609832

Identification of LncRNAs Associated With FOLFOX Chemoresistance in mCRC and Construction of a Predictive Model
Cited by: 4
Author(s): Yiyi Zhang, Meifang Xu, Yanwu Sun, Ying Chen, Pan Chi, Zongbin Xu, Xingrong Lu
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22094410

Gene Coexpression Network Analysis Indicates that Hub Genes Related to Photosynthesis and Starch Synthesis Modulate Salt Stress Tolerance in Ulmus pumila
Cited by: 8
Author(s): Panfei Chen, Peng Liu, Quanfeng Zhang, Chenhao Bu, Chunfeng Lu, Sudhakar Srivastava, Deqiang Zhang, Yun‐Chun Song
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-5777-z

Differential expression of innate and adaptive immune genes in the survivors of three gibel carp gynogenetic clones after herpesvirus challenge
Cited by: 17
Author(s): Wei-Jia Lu, Fan-Xiang Gao, Yan Wang, Qi-Ya Zhang, Zhi Li, Xiaojuan Zhang, Li Zhou, Jian‐Fang Gui
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2164-14-112

Cross-species transcriptional network analysis reveals conservation and variation in response to metal stress in cyanobacteria
Cited by: 31
Author(s): Jiangxin Wang, Gang Wu, Lei Chen, Weiwen Zhang
Software Mentions: 1
Published: over 13 years ago

10.3389/fcell.2021.600344

Up-Regulation of SALL4 Is Associated With Survival and Progression via Putative WNT Pathway in Gastric Cancer
Cited by: 7
Author(s): Yang Yang, Xiaohong Wang, Yiqiang Liu, Hanjie Ying, Zhongwu Li, Ziyu Li, Zhaode Bu, Xiaojiang Wu, Lianhai Zhang, Jiafu Ji
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2020.00252

Integrative Analysis for Elucidating Transcriptomics Landscapes of Glucocorticoid-Induced Osteoporosis
Cited by: 3
Author(s): Xiaoxia Ying, Xiyun Jin, Pingping Wang, Yingkun He, Haomiao Zhang, Xiang Ren, Songling Chai, Wang Fu, Pengcheng Zhao, Chen Chen, Guowu Ma, Huiying Liu
Software Mentions: 1
Published: over 6 years ago

10.1038/s41438-020-0279-3

Transcriptome profiles reveal that gibberellin-related genes regulate weeping traits in crape myrtle
Cited by: 14
Author(s): Suzhen Li, Tangchun Zheng, Xiaokang Zhuo, Zhuojiao Li, Lulu Li, Ping Li, Like Qiu, Huitang Pan, Jia Wang, Tangren Cheng, Qixiang Zhang
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms22095001

Integrating Transcriptome and Coexpression Network Analyses to Characterize Salicylic Acid- and Jasmonic Acid-Related Genes in Tolerant Poplars Infected with Rust
Cited by: 8
Author(s): Qiaoli Chen, Ruizhi Zhang, Danlei Li, Feng Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fcell.2021.734897

Potential Role of S-Palmitoylation in Cancer Stem Cells of Lung Adenocarcinoma
Cited by: 7
Author(s): Yitong Zhang, Fenglan Li, Kexin Fu, Xiqing Liu, I-Chia Lien, Hui Li
Software Mentions: 1
Published: about 5 years ago

10.1186/s13075-020-02248-2

Identification of novel genes associated with dysregulation of B cells in patients with primary Sjögren’s syndrome
Cited by: 22
Author(s): Jun Inamo, Katsuya Suzuki, Masaru Takeshita, Yoshiaki Kassai, Maiko Takiguchi, Rina Kurisu, Yuumi Okuzono, Shinya Tasaki, Akihiko Yoshimura, Tsutomu Takeuchi
Software Mentions: 1
Published: over 6 years ago

10.3389/fcvm.2014.00011

Dual Linkage of a Locus to Left Ventricular Mass and a Cardiac Gene Co-Expression Network Driven by a Chromosome Domain
Cited by: 2
Author(s): Marie Pier Scott-Boyer, Samantha D. Praktiknjo, Bastien Llamas, Sylvie Picard, Christian F. Deschepper
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2164-15-1015

Key regulators in prostate cancer identified by co-expression module analysis
Cited by: 23
Author(s): Junfeng Jiang, Peilin Jia, Zhongming Zhao, Bairong Shen
Software Mentions: 1
Published: almost 12 years ago

10.3389/fcvm.2019.00100

Isoproterenol-Induced Cardiac Diastolic Dysfunction in Mice: A Systems Genetics Analysis
Cited by: 14
Author(s): Jessica Wang, Adriana Huertas-Vázquez, Yibin Wang, Aldons J. Lusis
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-14-13

Genetic architecture of gene expression in the chicken
Cited by: 11
Author(s): Dragana Stanley, Nathan S. Watson-Haigh, Christopher Cowled, Robert J. Moore
Software Mentions: 1
Published: almost 14 years ago

10.3390/ijms22147649

Epigenetic Changes in Gestational Diabetes Mellitus
Cited by: 11
Author(s): Dominik Dłuski, Ewa Wolińska, Maciej Skrzypczak
Software Mentions: 1
Published: about 5 years ago

10.1038/s41438-021-00653-5

Genomic and transcriptomic analyses of Citrus sinensis varieties provide insights into Valencia orange fruit mastication trait formation
Cited by: 8
Author(s): Guizhi Feng, Xiu Ai, Hualin Yi, Wen‐Wu Guo, Juxun Wu
Software Mentions: 1
Published: about 5 years ago

10.1186/s12864-015-1398-3

Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses
Cited by: 79
Author(s): Zening Jin, Bobin Liu, Jianbo Li, Li Zhang, Yan Wang, Huanquan Zheng, Mengzhu Lu, Jun Chen
Software Mentions: 1
Published: over 11 years ago

10.3390/ijms22158128

Transcriptome Analysis of Flower Development and Mining of Genes Related to Flowering Time in Tomato (Solanum lycopersicum)
Cited by: 11
Author(s): Hexuan Wang, Yahui Yang, Yiyao Zhang, Tingting Zhao, Jingbin Jiang, Jin-Fu Li, Xiangyang Xu, Huanhuan Yang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41438-019-0225-4

Tea plant genomics: achievements, challenges and perspectives
Cited by: 90
Author(s): Enhua Xia, Wei Tong, Qiong Wu, Wei Shu, Jian Zhao, Zhengzhu Zhang, Chaoling Wei, Xiaochun Wan
Software Mentions: 1
Published: almost 7 years ago

10.3389/fbioe.2020.00177

Investigation of miRNA and mRNA Co-expression Network in Ependymoma
Cited by: 12
Author(s): Feili Liu, Hang Dong, Zi Mei, Tao Huang
Software Mentions: 1
Published: over 6 years ago

10.3389/fbioe.2021.651895

Functional Diversity Facilitates Stability Under Environmental Changes in an Outdoor Microalgal Cultivation System
Cited by: 8
Author(s): Lina Mattsson, Eva Sörenson, Eric Capo, Hanna Farnelid, Maurice Hirwa, Martin Olofsson, Fredrik Svensson, Elin Lindehoff, Catherine Legrand
Software Mentions: 1
Published: over 5 years ago

10.1038/s41438-020-0245-0

A temporal gene expression map of Chrysanthemum leaves infected with Alternaria alternata reveals different stages of defense mechanisms
Cited by: 21
Author(s): Ye Liu, Jingjing Xin, Lina Liu, Aiping Song, Zhiyong Guan, Weimin Fang, Fadi Chen
Software Mentions: 1
Published: over 6 years ago

10.1038/s41438-021-00591-2

Integrative iTRAQ-based proteomic and transcriptomic analysis reveals the accumulation patterns of key metabolites associated with oil quality during seed ripening of Camellia oleifera
Cited by: 28
Author(s): Zhouchen Ye, Jing Yu, Wuping Yan, Junfeng Zhang, Dongmei Yang, Guanglong Yao, Zijin Liu, Yougen Wu, Xilin Hou
Software Mentions: 1
Published: over 5 years ago

10.1186/s12864-019-6025-2

Transcriptome-wide association study and eQTL analysis to assess the genetic basis of bulb-yield traits in garlic (Allium sativum)
Cited by: 7
Author(s): Siyuan Zhu, Xiaojun Chen, Xia Liu, Jian Zhao, Touming Liu
Software Mentions: 1
Published: about 7 years ago

10.1186/s12864-019-5778-y

The adaptation strategies of Herpetospermum pedunculosum (Ser.) Baill at altitude gradient of the Tibetan plateau by physiological and metabolomic methods
Cited by: 21
Author(s): Yong Zhao, Frank F. Xu, Jia Liu, Fang Guan, Quan Hong, Fanjuan Meng
Software Mentions: 1
Published: over 7 years ago

10.1038/s41438-021-00490-6

The chromosome-based lavender genome provides new insights into Lamiaceae evolution and terpenoid biosynthesis
Cited by: 33
Author(s): Jingrui Li, Yiming Wang, Yanmei Dong, Wenying Zhang, Di Wang, Hongtong Bai, Kui Li, Hui Li, Lei Shi
Software Mentions: 1
Published: over 5 years ago

10.1007/s10585-020-10062-y

Correlation of exosomal microRNA clusters with bone metastasis in non-small cell lung cancer
Cited by: 20
Author(s): Xiaorong Yang, Can Pi, Rong Yu, Xiaojun Fan, Xudong Peng, Xuchao Zhang, Zhihong Chen, Xue Wu, Yang Shao, Yi‐Long Wu, Qing Zhou
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms22168369

Transcriptomic Analysis Reveals Key Genes Involved in Oil and Linoleic Acid Biosynthesis during Artemisia sphaerocephala Seed Development
Cited by: 4
Author(s): Shuzhen Nan, Lijing Zhang, Xiaowei Hu, Xiumei Miao, Xing Han, Hua Fu
Software Mentions: 1
Published: about 5 years ago

10.1002/iid3.414

Bioinformatics analysis of the prognosis and biological significance of VCAN in gastric cancer
Cited by: 11
Author(s): Xiaoyan Huang, Jinjian Liu, Xiong Liu, Yao‐hui Wang, Wei Xiang
Software Mentions: 1
Published: over 5 years ago

10.1002/iid3.436

Genomic analysis of host gene responses to cerebral <i>Plasmodium falciparum</i> malaria
Cited by: 4
Author(s): Ke Li, Wei Han, Hongfeng Zhang, Xiaoxiao Zhao, Yongji Lai, Fangfang Liu
Software Mentions: 1
Published: over 5 years ago

10.1016/j.immuni.2014.01.006

Transcriptome-Based Network Analysis Reveals a Spectrum Model of Human Macrophage Activation
Cited by: 1,570
Author(s): Jia Xue, Susanne V. Schmidt, Jil Sander, Astrid M. Draffehn, Wolfgang Krebs, Inga Quester, Dominic De Nardo, Trupti D. Gohel, Martina Emde, Lisa Schmidleithner, Hariharasudan Ganesan, Andrea Niño‐Castro, Michael R. Mallmann, Larisa I. Labzin, Heidi Theis, Michael Kraut, Marc Beyer, Eicke Latz, Tom C. Freeman, Thomas Ulas, Joachim L. Schultze
Software Mentions: 1
Published: over 12 years ago

10.1186/s13020-020-00344-8

Transcriptome analyses revealed the ultraviolet B irradiation and phytohormone gibberellins coordinately promoted the accumulation of artemisinin in Artemisia annua L.
Cited by: 10
Author(s): Tingyu Ma, Han Gao, Dong Zhang, Yuhua Shi, Tianyuan Zhang, Xiaofeng Shen, Lan Wu, Xiang Li, Shilin Chen
Software Mentions: 1
Published: over 6 years ago

10.3390/cells9010246

Novel Approaches for Identifying the Molecular Background of Schizophrenia
Cited by: 10
Author(s): Arkadiy K. Golov, Nikolay Kondratyev, G. P. Kostyuk, And Vera E Golimbet
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms22168835

Gene-Metabolite Network Analysis Revealed Tissue-Specific Accumulation of Therapeutic Metabolites in Mallotus japonicus
Cited by: 3
Author(s): Megha Rai, Amit Rai, Tetsuya Mori, Ryo Nakabayashi, Minako Yamamoto, Michimi Nakamura, Hideyuki Suzuki, Kazuki Saito, Mami Yamazaki
Software Mentions: 1
Published: about 5 years ago

10.3390/antiox10091385

Characterization of Heat Shock Protein 60 as an Interacting Partner of Superoxide Dismutase 2 in the Silkworm, Bombyx mori, and Its Response to the Molting Hormone, 20-Hydroxyecdysone
Cited by: 2
Author(s): Yosui Nojima
Software Mentions: 1
Published: about 5 years ago

Projects: cran: WGCNA

Science Score: 85/100

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Papers Mentioning WGCNA 3,479