Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: TSE
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/TSE
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Latest release: over 5 years ago
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Papers Mentioning TSE 25
10.12688/f1000research.26669.2
TreeSummarizedExperiment: a S4 class for data with hierarchical structureCited by: 14
Author(s): Ronald Huang, Charlotte Soneson, Felix G.M. Ernst, Kévin Rue-Albrecht, Yu Guo, Stephanie C. Hicks, Mark D. Robinson
Software Mentions: 11
Published: over 3 years ago
10.1186/1471-2105-14-S19-S1
MaTSE: the gene expression time-series explorerCited by: 46
Author(s): P. Craig, Alan Cannon, Robert Kukla, Jessie Kennedy
Software Mentions: 5
Published: about 11 years ago
10.1038/s42003-021-01925-5
Inhibiting LXRα phosphorylation in hematopoietic cells reduces inflammation and attenuates atherosclerosis and obesity in miceCited by: 2
Author(s): Maud Voisin, Elina Shrestha, Claire Rollet, Cyrus Nikain, Tatjana Josefs, Mélanie Mahé, Tessa Barrett, Hye Rim Chang, Rachel Ruoff, Jeffrey A. Schneider, Michela L. Garabedian, Chris Zoumadakis, Chi Sun Yun, Bara A. Badwan, Emily J. Brown, Adam C. Mar, Robert J. Schneider, Ira J. Goldberg, Inés Pineda-Torra, Edward A. Fisher
Software Mentions: 3
Published: over 3 years ago
10.1038/tp.2017.202
The BET/BRD inhibitor JQ1 improves brain plasticity in WT and APP miceCited by: 52
Author(s): Eva Benito, Binu Ramachandran, Henning Schroeder, G. Schmídt, Hendrik Urbanke, Susanne Burkhardt, Vincenzo Capece, Camin Dean, André Fischer
Software Mentions: 2
Published: about 7 years ago
10.15171/ijhpm.2020.01
Comparing 3 Approaches for Making Vaccine Adoption Decisions in ThailandCited by: 5
Author(s): Waranya Rattanavipapong, Ritika Kapoor, Yot Teerawattananon, Jos Luttjeboer, Siobhan Botwright, Rachel A. Archer, Birgitte Giersing, Raymond Hutubessy
Software Mentions: 2
Published: almost 5 years ago
10.1186/1471-2105-6-48
Cited by: 29Author(s): Roderic Page
Software Mentions: 2
Published: almost 20 years ago
10.3390/nu11102439
High Dose of Dietary Nicotinamide Riboside Induces Glucose Intolerance and White Adipose Tissue Dysfunction in Mice Fed a Mildly Obesogenic DietCited by: 25
Author(s): Wenbiao Shi, Maria A. Hegeman, Atanaska Doncheva, Melissa Bekkenkamp‐Grovenstein, Vincent C.J. de Boer, Jaap Keijer
Software Mentions: 2
Published: about 5 years ago
10.1007/s00766-017-0280-z
Goal-oriented requirements engineering: an extended systematic mapping studyCited by: 104
Author(s): Jennifer Horkoff, Fatma Başak Aydemir, Evellin Cardoso, Tong Li, Alejandro Maté, Elda Paja, Mattia Salnitri, Luca Piras, John Mylopoulos, Paolo Giorgini
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0104830
Mice in Bion-M 1 Space Mission: Training and SelectionCited by: 80
Author(s): Alexander Andreev-Andrievskiy, Anfisa Popova, Richard Boyle, Jeffrey R. Alberts, Борис Шенкман, О. Л. Виноградова, Oleg Dolgov, Konstantin V. Anokhin, Daria Tsvirkun, P. E. Soldatov, T. L. Nemirovskaya, Е.А. Ilyin, Vladimir Sychev
Software Mentions: 1
Published: over 10 years ago
10.1007/s00405-019-05279-x
Is CT or MRI the optimal imaging investigation for the diagnosis of large vestibular aqueduct syndrome and large endolymphatic sac anomaly?Cited by: 20
Author(s): Steve Connor, Cristina Dudau, Irumee Pai, M. Gaganasiou
Software Mentions: 1
Published: almost 6 years ago
10.3389/fnbeh.2021.735387
Measuring Behavior in the Home Cage: Study Design, Applications, Challenges, and PerspectivesCited by: 39
Author(s): Fabrizio Grieco, Briana J. Bernstein, Barbara Biemans, Lior Bikovski, C. Joseph Burnett, Jesse D. Cushman, Elsbeth A. van Dam, Sydney A. Fry, Bar Richmond-Hacham, Judith R. Homberg, Martien Kas, Helmut W. Kessels, Bastijn Koopmans, Michael J. Krashes, Vaishnav Krishnan, Sreemathi Logan, Maarten Loos, Katharine E. McCann, Qendresa Parduzi, Chaim G. Pick, Thomas D. Prevot, Gernot Riedel, Lianne Robinson, Mehrnoosh Sadighi, August B. Smit, William E. Sonntag, Reinko F. Roelofs, Ruud A.J. Tegelenbosch, L.P.J.J. Noldus
Software Mentions: 1
Published: about 3 years ago
10.3389/fphys.2017.00179
Metabolic Response of Visceral White Adipose Tissue of Obese Mice Exposed for 5 Days to Human Room Temperature Compared to Mouse ThermoneutralityCited by: 21
Author(s): Inge van der Stelt, Femke P M Hoevenaars, Jitka Široká, Lidwien de Ronde, David Friedecký, Jaap Keijer, Evert M. van Schothorst
Software Mentions: 1
Published: over 7 years ago
10.3389/fpsyg.2021.642566
The Psychometric Properties of Translating Self-Efficacy Belief: Perspectives From Chinese Learners of TranslationCited by: 3
Author(s): Yanxia Yang, Xinyu Cao, Xing Huo
Software Mentions: 1
Published: over 3 years ago
10.1007/s13238-019-0612-5
Mitochondrion-processed TERC regulates senescence without affecting telomerase activitiesCited by: 35
Author(s): Qian Zheng, Peipei Li, Ge Gao, Jiapei Yuan, Pengfeng Wang, Juntong Huang, Leiming Xie, Xiaoyong Lu, Fan Di, Tanjun Tong, Jun Chen, Zhi John Lu, Ji‐Song Guan, Geng Wang
Software Mentions: 1
Published: almost 6 years ago
10.7554/eLife.62952
A cross-sectional study of functional and metabolic changes during aging through the lifespan in male miceCited by: 40
Author(s): Michael Petr, Irene Alfaras, Melissa Krawcyzk, Woei-Nan Bair, Sarah J. Mitchell, Christopher H. Morrell, Stephanie A. Studenski, Nathan L. Price, Kenneth W. Fishbein, Richard G. Spencer, Morten Scheibye‐Knudsen, Edward G. Lakatta, Luigi Ferrucci, Miguel A. Aon, Michel Bernier, Rafael de Cabo
Software Mentions: 1
Published: over 3 years ago
10.7554/eLife.28685
Defective synaptic transmission causes disease signs in a mouse model of juvenile neuronal ceroid lipofuscinosisCited by: 28
Author(s): Benedikt Grünewald, Maren D. Lange, Christian Werner, Aet O’Leary, Andreas Weishaupt, Sandy Popp, David A. Pearce, Heinz Wiendl, Andreas Reif, Hans-Christian Pape, Klaus V. Toyka, Claudia Sommer, Christian Geis
Software Mentions: 1
Published: about 7 years ago
10.3390/ani9121026
Assessing Affective State in Laboratory Rodents to Promote Animal Welfare—What Is the Progress in Applied Refinement Research?Cited by: 37
Author(s): Paulin Jirkof, Juliane Rudeck, Lars Lewejohann
Software Mentions: 1
Published: almost 5 years ago
10.3390/nu12092568
Dietary Complex and Slow Digestive Carbohydrates Prevent Fat Deposits During Catch-Up Growth in RatsCited by: 5
Author(s): Rafael Salto, María D. Girón, Carolina Ortiz-Moral, Manuel Manzano, José Rienda, Francisco J Reche-Perez, Pilar Bueno-Vargas, Ricardo Rueda, J.M. López-Pedrosa
Software Mentions: 1
Published: about 4 years ago
10.1186/1741-7007-9-27
Expression of constitutively active erythropoietin receptor in pyramidal neurons of cortex and hippocampus boosts higher cognitive functions in miceCited by: 55
Author(s): Derya Sargin, Ahmed El-Kordi, Amit Agarwal, Michael Müller, Sonja M. Wojcik, Imam Hassouna, Swetlana Sperling, Klaus Armin Nave, Hannelore Ehrenreich
Software Mentions: 1
Published: over 13 years ago
10.1186/s12874-019-0709-9
Two-stage estimation to adjust for treatment switching in randomised trials: a simulation study investigating the use of inverse probability weighting instead of re-censoringCited by: 11
Author(s): Nicholas Latimer, Keith R. Abrams, Uwe Siebert
Software Mentions: 1
Published: over 5 years ago
10.3390/brainsci11040423
Observational Fear Learning in Rats: Role of Trait Anxiety and Ultrasonic VocalizationCited by: 6
Author(s): Markus Fendt, Claudia Paulina Gonzalez-Guerrero, Evelyn Kahl
Software Mentions: 1
Published: over 3 years ago
10.1002/mnfr.201600878
Effects of a wide range of dietary nicotinamide riboside (NR) concentrations on metabolic flexibility and white adipose tissue (WAT) of mice fed a mildly obesogenic dietCited by: 45
Author(s): Wenbiao Shi, Maria A. Hegeman, Dorien A.M. van Dartel, Jing Tang, Manuel Suárez, Hans J. M. Swarts, Bart van der Hee, Lluı́s Arola, Jaap Keijer
Software Mentions: 1
Published: over 7 years ago
10.3390/ph14080773
Facilitation of TRKB Activation by the Angiotensin II Receptor Type-2 (AT2R) Agonist C21Cited by: 1
Author(s): Liina Laukkanen, Cassiano Ricardo Alves Faria Diniz, Sébastien Foulquier, Jos Prickaerts, Eero Ċastrén, Plínio Casarotto
Software Mentions: 1
Published: over 3 years ago
10.14814/phy2.13782
A comprehensive analysis of auditory event-related potentials and network oscillations in an NMDA receptor antagonist mouse model using a novel wireless recording technologyCited by: 39
Author(s): Niklas Schuelert, Cornelia Dorner-Ciossek, Michael Brendel, Holger Rosenbrock
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0034963
Gastrin-Releasing Peptide Signaling Plays a Limited and Subtle Role in Amygdala Physiology and Aversive MemoryCited by: 18
Author(s): Frédérique Chaperon, Markus Fendt, Peter H. Kelly, Kurt Lingenhoehl, Johannes Mosbacher, Hans‐Rudolf Olpe, Peter Schmid, Christine Sturchler, Kevin H. McAllister, P. Herman van der Putten, Christine E. Gee
Software Mentions: 1
Published: over 12 years ago