Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.26669.2

https://doi.org/10.12688/f1000research.26669.2

Cited by: 14
Author(s): Ronald Huang, Charlotte Soneson, Felix G.M. Ernst, Kévin Rue-Albrecht, Yu Guo, Stephanie C. Hicks, Mark D. Robinson
Published: about 3 years ago

Software Mentions 11

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
bioconductor: SingleCellExperiment
S4 Classes for Single Cell Data
Papers that mentioned: 36
bioconductor: SummarizedExperiment
SummarizedExperiment container
Papers that mentioned: 52
bioconductor: TreeSummarizedExperiment
TreeSummarizedExperiment: a S4 Class for Data with Tree Structures
Papers that mentioned: 1
cran: ggnewscale
Multiple Fill and Colour Scales in 'ggplot2'
Papers that mentioned: 12
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: tree
Classification and Regression Trees
Papers that mentioned: 53
cran: TSE
Total Survey Error
Papers that mentioned: 25
pypi: tip
tip
Papers that mentioned: 3