cran: REST | Projects | Ecosyste.ms: Papers

10.3389/fnins.2017.00527

Electrophysiological Correlates of Change Detection during Delayed Matching Task: A Comparison of Different References
Cited by: 7
Author(s): Tengfei Liang, Zhonghua Hu, Yuchen Li, Ye C, Qiang Liu
Software Mentions: 2
Published: over 8 years ago

10.3389/fnins.2018.00900

Regional Homogeneity and Multivariate Pattern Analysis of Cervical Spondylosis Neck Pain and the Modulation Effect of Treatment
Cited by: 17
Author(s): Jun Chen, Zengjian Wang, Yiheng Tu, Xian Liu, Kristen Jorgenson, Guoxi Ye, Chenlin Lin, Jianhua Liu, Joel Park, Courtney Lang, Bo Liu, Jian Kong
Software Mentions: 2
Published: over 7 years ago

10.3389/fnins.2018.00158

A Comparative Study of Standardized Infinity Reference and Average Reference for EEG of Three Typical Brain States
Cited by: 12
Author(s): Gaoxing Zheng, Xiaoying Qi, Yuzhu Li, Wei Zhang, Yuguo Yu
Software Mentions: 2
Published: about 8 years ago

10.3389/fnins.2013.00137

A multi-site resting state fMRI study on the amplitude of low frequency fluctuations in schizophrenia
Cited by: 134
Author(s): Jessica A. Turner, Eswar Damaraju, Theo G.M. van Erp, Daniel H. Mathalon, Judith M. Ford, James T. Voyvodic, Bryon A. Mueller, Ayşenil Belger, Juan Bustillo, Sarah McEwen, Steven G. Potkin, Fbirn, Vince D. Calhoun
Software Mentions: 2
Published: over 13 years ago

10.18632/aging.102846

Baicalin ameliorates neuropathology in repeated cerebral ischemia-reperfusion injury model mice by remodeling the gut microbiota
Cited by: 42
Author(s): Jianfeng Liu, Tianhua Zhang, Yingying Wang, Chengqing Si, Xudong Wang, Ruitao Wang, Zhonghua Lv
Software Mentions: 2
Published: over 6 years ago

10.3389/fnins.2016.00313

Systemic Low-Frequency Oscillations in BOLD Signal Vary with Tissue Type
Cited by: 25
Author(s): Yunjie Tong, Lia M. Hocke, Kimberly P. Lindsey, Sinem Burcu Erdoğan, Gordana Vitaliano, Carolyn E. Caine, Blaise deB. Frederick
Software Mentions: 2
Published: almost 10 years ago

10.3389/fnins.2020.607912

Effects of the Openness to Experience Polygenic Score on Cortical Thickness and Functional Connectivity
Cited by: 1
Author(s): Zhiting Ren, Cheng Liu, J. Meng, Qiang Liu, Liang Shi, Xinran Wu, Song Li, Jiang Qiu
Software Mentions: 2
Published: over 5 years ago

10.3389/fnins.2017.00247

A Comparative Study of Average, Linked Mastoid, and REST References for ERP Components Acquired during fMRI
Cited by: 13
Author(s): Pei Yang, Chongyi Fan, Min Wang, Ling Li
Software Mentions: 2
Published: about 9 years ago

10.1186/s12864-017-3989-7

A genome-wide transcriptome map of pistachio (Pistacia vera L.) provides novel insights into salinity-related genes and marker discovery
Cited by: 30
Author(s): Maryam Moazzzam Jazi, Seyed Mahdi Seyedi, Esmaeil Ebrahimie, Mansour Ebrahimi, Gianluca De Moro, Christopher Botanga
Software Mentions: 2
Published: almost 9 years ago

10.3389/fnins.2019.00221

Graph Theoretical Characteristics of EEG-Based Functional Brain Networks in Patients With Epilepsy: The Effect of Reference Choice and Volume Conduction
Cited by: 17
Author(s): Maria Anastasiadou, Manolis Christodoulakis, Eleftherios S. Papathanasiou, Savvas Papacostas, Avgis Hadjipapas, Georgios D. Mitsis
Software Mentions: 2
Published: about 7 years ago

10.3389/fnins.2019.01341

Editorial: Through a Glass, Darkly: The Influence of the EEG Reference on Inference About Brain Function and Disorders
Cited by: 5
Author(s): María Luisa Bringas Vega, Paul L. Nunez, Jorge J. Riera, Rui Zhang, Pedro A. Valdés‐Sosa
Software Mentions: 2
Published: over 6 years ago

10.3389/fnins.2018.00297

Unified Bayesian Estimator of EEG Reference at Infinity: rREST (Regularized Reference Electrode Standardization Technique)
Cited by: 21
Author(s): Shiang Hu, Dezhong Yao, Pedro A. Valdés‐Sosa
Software Mentions: 2
Published: about 8 years ago

10.3389/fnins.2017.00205

Understanding the Influences of EEG Reference: A Large-Scale Brain Network Perspective
Cited by: 62
Author(s): Xu Lei, Keren Liao
Software Mentions: 2
Published: about 9 years ago

10.3389/fnins.2017.00509

A Comparative Study on the Dynamic EEG Center of Mass with Different References
Cited by: 11
Author(s): Yun Qin, Xiuwei Xin, Hao Zhu, Fali Li, Hongchuan Xiong, Tao Zhang, Yongxiu Lai
Software Mentions: 2
Published: over 8 years ago

10.3389/fphar.2018.00613

Extending in Silico Protein Target Prediction Models to Include Functional Effects
Cited by: 4
Author(s): Lewis Mervin, Avid M. Afzal, Lars Brive, Ola Engkvist, Andreas Bender
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-018-37546-y

Toxicity of diatom-derived polyunsaturated aldehyde mixtures on sea urchin Paracentrotus lividus development
Cited by: 6
Author(s): Nadia Ruocco, Concetta Annunziata, Adrianna Ianora, Giovanni Libralato, Loredana Manfra, Susan Costantini, Maria Costantini
Software Mentions: 2
Published: over 7 years ago

10.3389/fneur.2020.580408

Aberrant Hippocampal Network Connectivity Is Associated With Neurocognitive Dysfunction in Patients With Moderate and Severe Obstructive Sleep Apnea
Cited by: 19
Author(s): Liqun Zhou, Guiqian Liu, Hong Luo, Huabing Li, Yating Peng, Dandan Zong, Ruoyun Ouyang
Software Mentions: 2
Published: over 5 years ago

10.3389/fneur.2013.00043

Local Functional Connectivity as a Pre-Surgical Tool for Seizure Focus Identification in Non-Lesion, Focal Epilepsy
Cited by: 40
Author(s): Kurt E. Weaver, Wanpracha Art Chaovalitwongse, Edward J. Novotny, Andrew Poliakov, T. G. Grabowski, Jeffrey G. Ojemann
Software Mentions: 2
Published: over 13 years ago

10.3389/fmolb.2021.633130

Mutations of N1 Riboswitch Affect its Dynamics and Recognition by Neomycin Through Conformational Selection
Cited by: 8
Author(s): Piotr Chyży, Marta Kulik, Suyong Re, Yuji Sugita, Joanna Trylska
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-016-2693-3

Theobroma cacao L. pathogenesis-related gene tandem array members show diverse expression dynamics in response to pathogen colonization
Cited by: 36
Author(s): Andrew S. Fister, Luis C. Mejía, Yufan Zhang, Edward Allen Herre, Siela N. Maximova, Mark J. Guiltinan
Software Mentions: 2
Published: about 10 years ago

10.3389/fninf.2014.00053

Web based tools for visualizing imaging data and development of XNATView, a zero footprint image viewer
Cited by: 8
Author(s): David Gutman, William D. Dunn, Jake Cobb, Richard Martin Stoner, Jayashree Kalpathy‐Cramer, Bradley J. Erickson
Software Mentions: 2
Published: about 12 years ago

10.3389/fnbot.2017.00002

Connecting Artificial Brains to Robots in a Comprehensive Simulation Framework: The Neurorobotics Platform
Cited by: 86
Author(s): Egidio Falotico, Lorenzo Vannucci, Alessandro Ambrosano, Ugo Albanese, Stefan Ulbrich, J. Camilo Vasquez Tieck, Georg Hinkel, Jacques Kaiser, Igor Peric, Oliver Denninger, Nino Cauli, Murat Kırtay, Arne Roennau, Gudrun Klinker, Axel von Arnim, Luc Guyot, Daniel Peppicelli, Pablo Martínez‐Cañada, Eduardo Ros, Patrick Maier, Sandro Weber, Manuel Huber, David A. Plecher, Florian Röhrbein, Stefan Deser, Alina Roitberg, Patrick van der Smagt, R. Dillman, Paul Levi, Cecilia Laschi, Alois Knoll, Marc‐Oliver Gewaltig
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2014.00479

Pervasive effects of a dominant foliar endophytic fungus on host genetic and phenotypic expression in a tropical tree
Cited by: 72
Author(s): Luis C. Mejía, Edward Allen Herre, Jed P. Sparks, Klaus Winter, M. García, Sunshine A. Van Bael, Joseph P. Stitt, Zi Shi, Yufan Zhang, Mark J. Guiltinan, Siela N. Maximova
Software Mentions: 2
Published: over 11 years ago

10.3389/fimmu.2020.00630

Human Alveolar and Splenic Macrophage Populations Display a Distinct Transcriptomic Response to Infection With Mycobacterium tuberculosis
Cited by: 9
Author(s): Lelia Lavalett, Héctor Ortega, Luis F. Barrera
Software Mentions: 2
Published: about 6 years ago

10.3389/fimmu.2021.634497

In vitro Evaluation of Programmed Cell Death in the Immune System of Pacific Oyster Crassostrea gigas by the Effect of Marine Toxins
Cited by: 9
Author(s): Norma Estrada, Erick J. Núñez-Vázquez, Alejandra Palacios, Felipe Ascencio, Laura T. Guzmán-Villanueva, Rubén G. Contreras
Software Mentions: 2
Published: about 5 years ago

10.3389/fnhum.2020.585664

Increased Amygdala-Paracentral Lobule/Precuneus Functional Connectivity Associated With Patients With Mood Disorder and Suicidal Behavior
Cited by: 14
Author(s): Ran Zhang, Luheng Zhang, Shengnan Wei, Pengshuo Wang, Xiaowei Jiang, Yanqing Tang, Fei Wang
Software Mentions: 2
Published: over 5 years ago

10.1186/s12888-020-02831-6

Emotion reactivity-related brain network analysis in generalized anxiety disorder: a task fMRI study
Cited by: 12
Author(s): Jian Li, Yuan Zhong, Zijuan Ma, Yun Wu, Manlong Pang, Chiyue Wang, Na Liu, Chun Wang, Ning Zhang
Software Mentions: 2
Published: almost 6 years ago

10.3390/antiox9020180

Pharmacological Targets of Kaempferol Within Inflammatory Pathways—A Hint Towards the Central Role of Tryptophan Metabolism
Cited by: 15
Author(s): Stefanie Hofer, Simon Geisler, Rebecca Lisandrelli, Huu Tung Nguyen, Markus Ganzera, Harald Schennach, Dietmar Fuchs, Julian E. Fuchs, Johanna M. Gostner, Katharina Kurz
Software Mentions: 2
Published: over 6 years ago

10.3389/fnhum.2018.00279

Effects of the 2-Repeat Allele of the DRD4 Gene on Neural Networks Associated With the Prefrontal Cortex in Children With ADHD
Cited by: 9
Author(s): Andan Qian, Jiejie Tao, Xin Wang, Huiru Liu, Ling-Xiao Ji, Chuang Yang, Qiong Ye, Chengchun Chen, Jiance Li, Jingliang Cheng, Meihao Wang, Ke Zhao
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2018.00268

The Small RNA RyhB Is a Regulator of Cytochrome Expression in Shewanella oneidensis
Cited by: 9
Author(s): Karin L. Meibom, Elena M. Cabello, Rizlan Bernier‐Latmani
Software Mentions: 2
Published: over 8 years ago

10.3389/fnhum.2018.00322

Mapping the Spatiotemporal Evolution of Emotional Processing: An MEG Study Across Arousal and Valence Dimensions
Cited by: 11
Author(s): Charis Styliadis, Andreas A. Ioannides, Panagiotis D. Bamidis, Christos Papadelis
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12859-020-03952-1

DeepGRN: prediction of transcription factor binding site across cell-types using attention-based deep neural networks
Cited by: 33
Author(s): Chen Chen, Jie Hou, Xiaowen Shi, Hua Yang, James A. Birchler
Software Mentions: 2
Published: over 5 years ago

10.3389/fnhum.2014.00409

Network complexity as a measure of information processing across resting-state networks: evidence from the Human Connectome Project
Cited by: 101
Author(s): Ian M. McDonough, Kaoru Nashiro
Software Mentions: 2
Published: almost 12 years ago

10.1186/s12859-018-2016-6

BRCA-Pathway: a structural integration and visualization system of TCGA breast cancer data on KEGG pathways
Cited by: 18
Author(s): In-Young Kim, Saemi Choi, Sun Kim
Software Mentions: 2
Published: over 8 years ago

10.3389/fcell.2017.00012

The Importance of REST for Development and Function of Beta Cells
Cited by: 21
Author(s): David Martín, Anne Grapin-Botton
Software Mentions: 2
Published: over 9 years ago

10.18632/aging.202763

Gut microbiota from mice with cerebral ischemia-reperfusion injury affects the brain in healthy mice
Cited by: 10
Author(s): Wang Hong-ru, Shangjun Ren, Hailing Lv, Lili Cao
Software Mentions: 2
Published: about 5 years ago

10.3389/fnhum.2020.574148

Brain Responses to Food Odors Associated With BMI Change at 2-Year Follow-Up
Cited by: 6
Author(s): Pengfei Han, Hong Chen, Thomas Hummel
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-11-582

Differential gene expression during the moult cycle of Antarctic krill (Euphausia superba)
Cited by: 43
Author(s): Paul J. Seear, Geraint A. Tarling, Gavin Burns, William P. Goodall‐Copestake, E. Gaten, Özge Özkaya, Ezio Rosato
Software Mentions: 2
Published: over 15 years ago

10.1186/s12859-015-0797-4

Inferring intra-motif dependencies of DNA binding sites from ChIP-seq data
Cited by: 34
Author(s): Ralf Eggeling, Teemu Roos, Petri Myllymäki, Ivo Große
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2164-14-657

Targets of light signalling in Trichoderma reesei
Cited by: 67
Author(s): Doris Tisch, Monika Schmoll
Software Mentions: 2
Published: over 13 years ago

10.1186/s12991-018-0217-z

Resting-state brain activity in Chinese boys with low functioning autism spectrum disorder
Cited by: 13
Author(s): Gaizhi Li, Kathryn Rossbach, Wenqing Jiang, Yasong Du
Software Mentions: 2
Published: over 7 years ago

10.1186/s12870-018-1244-2

Diel pattern of circadian clock and storage protein gene expression in leaves and during seed filling in cowpea (Vigna unguiculata)
Cited by: 13
Author(s): Julia Weiß, Marta I. Terry, Marina Martos-Fuentes, Lisa Letourneux, Victoria Ruiz-Hernández, Juan Antonio Fernández Hernández, Marcos Egea‐Cortines
Software Mentions: 2
Published: over 8 years ago

10.3389/fnhum.2015.00074

Differential cerebral response to somatosensory stimulation of an acupuncture point vs. two non-acupuncture points measured with EEG and fMRI
Cited by: 27
Author(s): Till Nierhaus, Daniel Pach, Weixin Huang, Xiangyu Long, Vitaly Napadow, Stephanie Roll, Fanrong Liang, Burkhard Pleger, Arno Villringer, Claudia M. Witt
Software Mentions: 2
Published: over 11 years ago

10.3389/fnagi.2014.00075

Deciphering the Molecular Profile of Plaques, Memory Decline and Neuron Loss in Two Mouse Models for Alzheimerâ€™s Disease by Deep Sequencing
Cited by: 71
Author(s): Yvonne Bouter, Tim Kacprowski, Robert Weißmann, Katharina Dietrich, Henning Borgers, Andreas Brauß, Christian Sperling, Oliver Wirths, Mario Albrecht, Lars Riff Jensen, Andreas W. Kuß, Thomas A. Bayer
Software Mentions: 2
Published: about 12 years ago

10.3389/fbioe.2019.00106

Cyberbiosecurity Challenges of Pathogen Genome Databases
Cited by: 15
Author(s): Boris A. Vinatzer, Lenwood S. Heath, Hussain M. J. Almohri, Michael J. Stulberg, Christopher J. Lowe, Song Li
Software Mentions: 2
Published: about 7 years ago

10.1186/s12888-016-1047-7

Association between abnormal default mode network activity and suicidality in depressed adolescents
Cited by: 125
Author(s): Shuang Zhang, Jianmei Chen, Li Kuang, Jian Cao, Han Zhang, Ming Ai, Wo Wang, Shudong Zhang, Suya Wang, Shijing Liu, Weidong Fang
Software Mentions: 2
Published: over 9 years ago

10.3389/fnhum.2019.00365

Stereoscopic Rendering via Goggles Elicits Higher Functional Connectivity During Virtual Reality Gaming
Cited by: 9
Author(s): Caroline Garcia Forlim, Lukas Bittner, Fariba Mostajeran, Frank Steinicke, Jürgen Gallinat, Simone Kühn
Software Mentions: 2
Published: over 6 years ago

10.3389/fnhum.2015.00386

GRETNA: a graph theoretical network analysis toolbox for imaging connectomics
Cited by: 544
Author(s): Jinhui Wang, Xindi Wang, Mingrui Xia, Xuhong Liao, Alan C. Evans, Yong He
Software Mentions: 2
Published: almost 11 years ago

10.3389/fnins.2018.00827

TPH-2 Gene Polymorphism in Major Depressive Disorder Patients With Early-Wakening Symptom
Cited by: 16
Author(s): Shiwan Tao, Mohammad Ridwan Chattun, Rui Yan, Jiting Geng, Rong Zhu, Junneng Shao, Qing Lü, Zhijian Yao
Software Mentions: 2
Published: over 7 years ago

10.1186/1471-2164-14-607

RNA-seq analyses of gene expression in the microsclerotia of Verticillium dahliae
Cited by: 69
Author(s): Dechassa Duressa, Amy Anchieta, Dongquan Chen, Anna Klimes, Maria D. García-Pedrajas, Katherine F. Dobinson, Steven J. Klosterman
Software Mentions: 2
Published: over 12 years ago

10.1186/s12888-016-1190-1

Altered fractional amplitude of low frequency fluctuation associated with cognitive dysfunction in first-episode drug-naïve major depressive disorder patients
Cited by: 32
Author(s): Manli Huang, Shengyong Lu, Liang Yu, Lingjiang Li, Peng Zhang, Jianbo Hu, Weihua Zhou, Shaohua Hu, Ning Wei, Jinwen Huang, Jian Weng, Yi Xu
Software Mentions: 2
Published: over 9 years ago

10.1186/s12859-020-03928-1

Menoci: lightweight extensible web portal enhancing data management for biomedical research projects
Cited by: 7
Author(s): Markus Suhr, Christoph U. Lehmann, Christian R. Bauer, Theresa Bender, Cornelius Knopp, Luca Freckmann, Björn Öst Hansen, Christian Henke, Georg Aschenbrandt, Lea K Kühlborn, Sophia Rheinländer, Linus Weber, Bartlomiej Marzec, Marcel Hellkamp, Philipp Wieder, Harald Kusch, Ulrich Sax, Sara Y. Nussbeck
Software Mentions: 2
Published: over 5 years ago

10.1093/database/bav049

An Ebola virus-centered knowledge base
Cited by: 13
Author(s): Maulik R. Kamdar, Michel Dumontier
Software Mentions: 2
Published: over 11 years ago

10.1093/database/bau050

Web services-based text-mining demonstrates broad impacts for interoperability and process simplification
Cited by: 22
Author(s): Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly
Software Mentions: 2
Published: almost 12 years ago

10.1093/database/bav119

Ensembl regulation resources
Cited by: 43
Author(s): Daniel R. Zerbino, Nathan Johnson, Thomas Juetteman, Dan Sheppard, Steven P. Wilder, Ilias Lavidas, Michael Nuhn, Emily Perry, Quentin Raffaillac-Desfosses, Daniel Sobral, Damian Keefe, Stefan Gräf, Ikhlak Ahmed, Rhoda Kinsella, Bethan Pritchard, Simon Brent, Ridwan M Amode, Anne Parker, Stephen J. Trevanion, Ewan Birney, Ian Dunham, Paul Flicek
Software Mentions: 2
Published: over 10 years ago

10.1155/2021/5565824

Decoding of Motor Coordination Imagery Involving the Lower Limbs by the EEG-Based Brain Network
Cited by: 2
Author(s): Yunfa Fu, Zhouzhou Zhou, Anmin Gong, Qian Qian, Lei Su, Zhixin Lei
Software Mentions: 2
Published: almost 5 years ago

10.1093/texcom/tgab035

Behavioral and Neural Signatures of Visual Imagery Vividness Extremes: Aphantasia versus Hyperphantasia
Cited by: 46
Author(s): Fraser Milton, Jon Fulford, Carla Dance, James Gaddum, Brittany Heuerman-Williamson, Kealan Jones, Kathryn F Knight, Matthew MacKisack, Crawford Winlove, Adam Zeman
Software Mentions: 2
Published: over 5 years ago

10.3389/fninf.2018.00056

Neuroscience Information Toolbox: An Open Source Toolbox for EEG–fMRI Multimodal Fusion Analysis
Cited by: 47
Author(s): Li Dong, Luo Chen, Xiaobo Liu, Sisi Jiang, Fali Li, Hongshuo Feng, Jianfu Li, Diankun Gong, Dezhong Yao
Software Mentions: 2
Published: almost 8 years ago

10.1039/c8cs00040a

Molecular simulations of self-assembling bio-inspired supramolecular systems and their connection to experiments
Cited by: 109
Author(s): Pim W. J. M. Frederix, Ilias Patmanidis, Siewert J. Marrink
Software Mentions: 2
Published: over 8 years ago

10.1186/s12864-015-1856-y

Large scale transcriptome analysis reveals interplay between development of forest trees and a beneficial mycorrhiza helper bacterium
Cited by: 27
Author(s): Florence Kurth, Lasse Feldhahn, Markus Bönn, Sylvie Herrmann, François Buscot, Mika Tarkka
Software Mentions: 2
Published: almost 11 years ago

10.1038/s42003-020-01497-w

Fine-mapping and cell-specific enrichment at corneal resistance factor loci prioritize candidate causal regulatory variants
Cited by: 7
Author(s): Xinyi Jiang, Nefeli Dellepiane, Erola Pairo-Castineira, Thibaud Boutin, Yatendra Kumar, Wendy A. Bickmore, Véronique Vitart
Software Mentions: 2
Published: over 5 years ago

10.22074/cellj.2020.6193

Repression of TGF-β Signaling in Breast Cancer Cells by miR-302/367 Cluster.
Cited by: 4
Author(s): Mona Ahmadalizadeh Khanehsar, Moslem Hoseinbeyki, Masoumeh Fakhr Taha, Arash Javeri
Software Mentions: 2
Published: over 6 years ago

10.3389/fnins.2018.00250

The Scalp Time-Varying Networks of N170: Reference, Latency, and Information Flow
Cited by: 15
Author(s): Yin Tian, Wei Xu, Huiling Zhang, Kin Yip Tam, Haiyong Zhang, Li Yang, Zhangyong Li, Yu Pang
Software Mentions: 2
Published: about 8 years ago

10.1186/s12864-020-06806-5

Oak displays common local but specific distant gene regulation responses to different mycorrhizal fungi
Cited by: 13
Author(s): Marie-Lara Bouffaud, Sylvie Herrmann, Mika Tarkka, Markus Bönn, Lasse Feldhahn, François Buscot
Software Mentions: 2
Published: almost 6 years ago

10.22074/cellj.2021.7139

Long-Term Effects of Hippocampal Low-Frequency Stimulation on Pro-Inflammatory Factors and Astrocytes Activity in Kindled Rats.
Cited by: 1
Author(s): Razieh Rohani, Abbas Aliaghaei, Mohammad‐Amin Abdollahifar, Yousef Sadeghi, Leila Zare, Samaneh Dehghan, Mohammad Hassan Heidari
Software Mentions: 2
Published: about 5 years ago

10.3390/antiox9080662

Neuroprotective Effect of HIF Prolyl Hydroxylase Inhibition in an In Vitro Hypoxia Model
Cited by: 18
Author(s): Maria Savyuk, Mikhail Krivonosov, Tatiana A. Mishchenko, Irina G. Gazaryan, Mikhail Ivanchenko, A. Yu. Khristichenko, Andrey Poloznikov, Dmitry M. Hushpulian, С. В. Никулин, E. A. Tonevitsky, Guzal Abuzarova, Еlena V. Mitroshina, Maria V. Vedunova
Software Mentions: 2
Published: almost 6 years ago

10.3389/fnins.2019.00705

Influence of EEG References on N170 Component in Human Facial Recognition
Cited by: 5
Author(s): Yi Wang, Hua Huang, Hao Yang, Xie Jian, Site Mo, Hongyu Lai, Ting Wu, Junpeng Zhang
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41419-020-2269-7

Loss of RE-1 silencing transcription factor accelerates exocrine damage from pancreatic injury
Cited by: 12
Author(s): J. W. Bray, Ola A. Elgamal, Jinmai Jiang, Lais S. Wright, Dhruvitkumar S. Sutaria, Mohamed Badawi, Madeline G. Borcyk, Xiuli Liu, Kristianna M. Fredenburg, Martha Campbell-Thompson, Thomas D. Schmittgen
Software Mentions: 2
Published: over 6 years ago

10.3389/fnins.2018.00996

Altered Functional Connectivity of Cerebello-Cortical Circuit in Multiple System Atrophy (Cerebellar-Type)
Cited by: 20
Author(s): Shan Ren, Hao Zhang, Wengang Zheng, Ming Liu, Fang Gao, Zhiqun Wang, Zhigang Chen
Software Mentions: 2
Published: over 7 years ago

10.22074/cellj.2020.6582

Cardiac Differentiation of Adipose Tissue-Derived Stem Cells Is Driven by BMP4 and bFGF but Counteracted by 5-Azacytidine and Valproic Acid.
Cited by: 3
Author(s): Sanaz Hasani, Arash Javeri, Asadollah Asadi, Masoumeh Fakhr Taha
Software Mentions: 2
Published: over 5 years ago

10.1186/1746-6148-9-12

Detection and comparison of microRNA expression in the serum of Doberman Pinschers with dilated cardiomyopathy and healthy controls
Cited by: 28
Author(s): Carola Steudemann, Stefan Bauersachs, Karin Weber, Gerhard Wess
Software Mentions: 2
Published: over 13 years ago

10.1038/s42003-019-0342-5

Tasmanian devils with contagious cancer exhibit a constricted T-cell repertoire diversity
Cited by: 13
Author(s): Yuanyuan Cheng, Mariano Makara, Emma Peel, Samantha Fox, Anthony T. Papenfuss, Katherine Belov
Software Mentions: 2
Published: about 7 years ago

10.3389/fnins.2018.00148

Hearing the Sound in the Brain: Influences of Different EEG References
Cited by: 5
Author(s): Dan Wu
Software Mentions: 2
Published: about 8 years ago

10.1186/1471-2164-12-423

Testing the importance of jasmonate signalling in induction of plant defences upon cabbage aphid (Brevicoryne brassicae) attack
Cited by: 57
Author(s): Anna Kuśnierczyk, Diem Hong Tran, Per Winge, Tommy S Jørstad, John C. Reese, Joanna Troczyńska, Atle M. Bones
Software Mentions: 2
Published: almost 15 years ago

10.3389/fnins.2017.00368

How Different EEG References Influence Sensor Level Functional Connectivity Graphs
Cited by: 25
Author(s): Yunzhi Huang, Junpeng Zhang, Yuan Cao, Gang Yang, Ling He, Qi Liu, Guofu Yin
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0036986

Connectivity of Default-Mode Network Is Associated with Cerebral Edema in Hepatic Encephalopathy
Cited by: 26
Author(s): Wei Che Lin, Tun-Wei Hsu, Chao Long Chen, Changwei W. Wu, Cheng Hsien Lu, Hsiu-Ling Chen, Shau Hsuan Li, Pin Yang Yeh, Yu Cheng, Ching Po Lin
Software Mentions: 2
Published: about 14 years ago

10.1186/s12864-018-5039-5

Genome-wide transcriptome analysis using RNA-Seq reveals a large number of differentially expressed genes in a transient MCAO rat model
Cited by: 46
Author(s): Lyudmila V. Dergunova, Ivan B. Filippenkov, Vasily V. Stavchansky, Alina E. Denisova, Vadim V. Yuzhakov, С. А. Мозеров, Leonid V. Gubsky, Svetlana A. Limborska
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0040266

Functional Feeds Reduce Heart Inflammation and Pathology in Atlantic Salmon (Salmo salar L.) following Experimental Challenge with Atlantic Salmon Reovirus (ASRV)
Cited by: 55
Author(s): Laura Martínez-Rubio, Sofía Morais, Øystein Evensen, Simón Wadsworth, Kari Ruohonen, Jose L. González Vecino, J.G. Bell, Douglas R. Tocher
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0028254

Filaggrin Genotype Determines Functional and Molecular Alterations in Skin of Patients with Atopic Dermatitis and Ichthyosis Vulgaris
Cited by: 60
Author(s): M Winge, Torborg Hoppe, Berit Berne, Anders Vahlquist, Magnus Nordenskjöld, J. F. N. Bradley, Hans Törmä
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0162237

RNAseq Transcriptional Profiling following Whip Development in Sugarcane Smut Disease
Cited by: 43
Author(s): Patrícia Dayane Carvalho Schaker, Aristides Palhares, Lucas Mitsuo Taniguti, Leila Priscila Peters, Silvana Creste, Karen S. Aitken, Marie‐Anne Van Sluys, João Paulo Kitajima, Maria Lúcia Carneiro Vieira, Cláudia Barros Monteiro-Vitorello
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12864-015-1574-5

Key genes as stress indicators in the ubiquitous diatom Skeletonema marinoi
Cited by: 35
Author(s): Chiara Lauritano, Ida Orefice, Gabriele Procaccini, Giovanna Romano, Adrianna Ianora
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0144937

From Insect to Man: Photorhabdus Sheds Light on the Emergence of Human Pathogenicity
Cited by: 28
Author(s): Geraldine Mulley, Michael L. Beeton, Paul Wilkinson, Isabella Vlisidou, Nina Ockendon-Powell, Alexia Hapeshi, Nicholas J. Tobias, Friederike I. Nollmann, Helge B. Bode, Jean M. H. van den Elsen, Richard H. ffrench-Constant, Nicholas R. Waterfield
Software Mentions: 2
Published: over 10 years ago

10.1186/s12863-018-0702-z

The transcription factor PRO44 and the histone chaperone ASF1 regulate distinct aspects of multicellular development in the filamentous fungus Sordaria macrospora
Cited by: 14
Author(s): David Immanuel Schumacher, Ramona Lütkenhaus, Florian Altegoer, Ines Teichert, Ulrich Kück, Minou Nowrousian
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0233088

Betanin purification from red beetroots and evaluation of its anti-oxidant and anti-inflammatory activity on LPS-activated microglial cells
Cited by: 26
Author(s): Hosein Ahmadi, Zahra Nayeri, Zarrin Minuchehr, Farzaneh Sabouni, Mehdi Mohammadi
Software Mentions: 2
Published: about 6 years ago

10.1534/g3.116.030791

Mutations in<i>Dnaaf1</i>and<i>Lrrc48</i>Cause Hydrocephalus, Laterality Defects, and Sinusitis in Mice
Cited by: 34
Author(s): Seungshin Ha, Anna Lindsay, Andrew E. Timms, David R. Beier
Software Mentions: 2
Published: almost 10 years ago

10.3390/genes11020117

Inguinal Ring RNA Sequencing Reveals Downregulation of Muscular Genes Related to Scrotal Hernia in Pigs
Cited by: 6
Author(s): Gabriela Romano, A. M. G. Ibelli, William Raphael Lorenzetti, Tomás Weber, J. de O. Peixoto, Maurício Egídio Cantão, M. A. Z. Morés, N. Morés, Victor Breno Pedrosa, Luiz Lehmann Coutinho, Mônica Corrêa Ledur
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0162828

The Pre-Eclampsia Ontology: A Disease Ontology Representing the Domain Knowledge Specific to Pre-Eclampsia
Cited by: 6
Author(s): Satoshi Mizuno, Soichi Ogishima, Hidekazu Nishigori, Daniel Jamieson, Karin Verspoor, Hiroshi Tanaka, Nobuo Yaegashi, Jun Nakaya
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0050064

Differential Deactivation during Mentalizing and Classification of Autism Based on Default Mode Network Connectivity
Cited by: 92
Author(s): Donna L. Murdaugh, Svetlana V. Shinkareva, Hrishikesh R. Deshpande, Jing Wang, Mark R. Pennick, Rajesh K. Kana
Software Mentions: 2
Published: over 13 years ago

10.1186/s13059-016-0952-x

RISC-mediated control of selected chromatin regulators stabilizes ground state pluripotency of mouse embryonic stem cells
Cited by: 11
Author(s): Luca Pandolfini, Ettore Luzi, Dario Bressan, Nadia Ucciferri, Michele Bertacchi, Rossella Brandi, Silvia Rocchiccioli, Mara D’Onofrio, Federico Cremisi
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0173289

Comparing resting state fMRI de-noising approaches using multi- and single-echo acquisitions
Cited by: 68
Author(s): Ottavia Dipasquale, Arjun Sethi, Maria Marcella Laganà, Francesca Baglio, Giuseppe Baselli, Prantik Kundu, Neil A. Harrison, Mara Cercignani
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0159563

Glutathione S-Transferase Regulation in Calanus finmarchicus Feeding on the Toxic Dinoflagellate Alexandrium fundyense
Cited by: 9
Author(s): Vittoria Roncalli, Michelle J. Jungbluth, Petra H. Lenz
Software Mentions: 2
Published: almost 10 years ago

10.1186/1471-2180-12-S1-S1

Feminizing Wolbachia: a transcriptomics approach with insights on the immune response genes in Armadillidium vulgare
Cited by: 45
Author(s): Frédéric D. Chevalier, Juline Herbinière-Gaboreau, Delphine Charif, Guillaume Mitta, Frédérick Gavory, Patrick Wincker, Pierre Grève, Christine Braquart‐Varnier, Didier Bouchon
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0243869

Evaluation of the impact of surgical aortic valve replacement on short-term cardiovascular and cerebrovascular controls through spontaneous variability analysis
Cited by: 6
Author(s): Alberto Porta, Angela Fantinato, Vlasta Bari, Francesca Gelpi, Beatrice Cairo, Beatrice De Maria, Enrico Giuseppe Bertoldo, Valentina Fiolo, Edward Callus, Carlo De Vincentiis, Marianna Volpe, Raffaella Molfetta, Marco Ranucci
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2180-12-S1-S14

Host gene response to endosymbiont and pathogen in the cereal weevil Sitophilus oryzae
Cited by: 38
Author(s): Aurélien Vigneron, Delphine Charif, Carole Vincent-Monégat, Agnès Vallier, Frédérick Gavory, Patrick Wincker, Abdelaziz Heddi
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0076234

NR4A2 Is Regulated by Gastrin and Influences Cellular Responses of Gastric Adenocarcinoma Cells
Cited by: 13
Author(s): Kristine Misund, Linn-Karina M. Selvik, Shalini Rao, Kristin G. Nørsett, Ingrid Bakke, Arne K. Sandvik, Astrid Lægreid, Torunn Bruland, Wenche S. Prestvik, Liv Thommesen
Software Mentions: 2
Published: over 12 years ago

10.1186/1472-6947-13-57

Applying representational state transfer (REST) architecture to archetype-based electronic health record systems
Cited by: 30
Author(s): Erik Sundvall, Mikael Nyström, Daniel Karlsson, Martin Eneling, Rong Chen, Håkan Örman
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0212089

In vitro evaluation of the protective effects of plant extracts against amyloid-beta peptide-induced toxicity in human neuroblastoma SH-SY5Y cells
Cited by: 23
Author(s): Ana Luiza Sereia, Marcelo Tempesta de Oliveira, Adrivânio Baranoski, Leila Larisa Medeiros Marques, Fabianne Martins Ribeiro, Raquel Garcia Isolani, Daniela Cristina de Medeiros Araújo, Danielly Chierrito, Danielle Lazarin-Bidóia, Acácio Antônio Ferreira Zielinski, Cláudio Roberto Novello, Celso Vataru Nakamura, Mário Mantovani, João Carlos Palazzo de Mello
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0148451

Identification and Validation of Reference Genes and Their Impact on Normalized Gene Expression Studies across Cultivated and Wild Cicer Species
Cited by: 37
Author(s): D. Srinivas Reddy, Pooja Bhatnagar‐Mathur, Palakolanu Sudhakar Reddy, Katamreddy Sri Cindhuri, Adusumalli Sivaji Ganesh, Kiran K. Sharma
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0077914

Regional Brain Atrophy and Functional Connectivity Changes Related to Fatigue in Multiple Sclerosis
Cited by: 63
Author(s): Álvaro Javier Cruz-Gómez, Noelia Ventura‐Campos, Antonio Belenguer, César Ávila, Cristina Forn
Software Mentions: 2
Published: over 12 years ago

10.1140/epjc/s10052-016-4372-6

TREX-DM: a low-background Micromegas-based TPC for low-mass WIMP detection
Cited by: 32
Author(s): F.J. Iguaz, J.G. Garza, Francisco Aznar, J. Castel, S. Cebrián, T. Dafní, Juan Antonio Garcı́a, I. G. Irastorza, A. Lagraba, G. Luzón, A. Peiró
Software Mentions: 2
Published: over 9 years ago

Projects: cran: REST

Science Score: 75/100

Penalties:

Papers Mentioning REST 1,757