cran: REST | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0105707

Changes in Cecal Microbiota and Mucosal Gene Expression Revealed New Aspects of Epizootic Rabbit Enteropathy
Cited by: 50
Author(s): Christine Bäuerl, María Carmen Collado, Manuel Zúñiga, E. Blas, Gaspar Pérez‐Martínez
Software Mentions: 3
Published: about 12 years ago

10.1371/journal.pone.0038602

Gene Expression Changes in the Septum: Possible Implications for MicroRNAs in Sculpting the Maternal Brain
Cited by: 19
Author(s): Changjiu Zhao, Michael C. Saul, Terri M. Driessen, Stephen C. Gammie
Software Mentions: 3
Published: over 14 years ago

10.1371/journal.pone.0183526

Transcriptomic profile of cystic fibrosis patients identifies type I interferon response and ribosomal stalk proteins as potential modifiers of disease severity
Cited by: 23
Author(s): Michael Kormann, Alexander Dewerth, Felizitas A. Eichner, Praveen Baskaran, Andreas Hector, Nicolas Regamey, Dominik Hartl, Rupert Handgretinger, Justin S. Antony
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pcbi.1006542

Eleven quick tips to build a usable REST API for life sciences
Cited by: 17
Author(s): Aleksandra Tarkowska, Denise Carvalho-Silva, Charles E. Cook, E. B. Turner, Alex Bateman, Andy Yates
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pgen.0030145

Systematic Identification of cis-Regulatory Sequences Active in Mouse and Human Embryonic Stem Cells
Cited by: 80
Author(s): Marica Grs̆ković, Christina Chaivorapol, Alexandre Gaspar-Maia, Hao Li, Miguel Ramalho-Santos
Software Mentions: 3
Published: about 19 years ago

10.1242/dev.169367

Distal-less activates butterfly eyespots consistent with a reaction diffusion process
Cited by: 53
Author(s): Heidi Connahs, Sham Tlili, Jelle van Creij, Tricia Y. J. Loo, Tirtha Das Banerjee, Timothy E. Saunders, Antónia Monteiro
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0190292

Examining the short-term anxiolytic and antidepressant effect of Floatation-REST
Cited by: 34
Author(s): Justin S. Feinstein, Sahib S. Khalsa, Hung‐Wen Yeh, Colleen Wohlrab, W. Kyle Simmons, Murray B. Stein, Martin P. Paulus
Software Mentions: 3
Published: over 8 years ago

10.3390/ijms22136674

Sub-Chronic Effects of Slight PAH- and PCB-Contaminated Mesocosms in Paracentrotus lividus Lmk: A Multi-Endpoint Approach and De Novo Transcriptomic
Cited by: 7
Author(s): Luisa Albarano, Valerio Zupo, Davide Caramiello, Maria Toscanesi, Marco Trifuoggi, Marco Guida, Giovanni Libralato, Maria Costantini
Software Mentions: 3
Published: over 5 years ago

10.3389/fninf.2018.00052

BRANT: A Versatile and Extendable Resting-State fMRI Toolkit
Cited by: 49
Author(s): Kaibin Xu, Yong Liu, Yafeng Zhan, Jiaji Ren, Tianzi Jiang
Software Mentions: 3
Published: about 8 years ago

10.1002/1878-0261.12903

REST promotes ETS1‐dependent vascular growth in medulloblastoma
Cited by: 9
Author(s): Shavali Shaik, Satoru Maegawa, Amanda R. Haltom, Feng Wang, Xue Xiao, Tara Dobson, Ajay Sharma, Yanwen Yang, Jyothishmathi Swaminathan, Vikas Kundra, Xiao Nan Li, Keri Schadler, Arif Harmanci, Lin Xu, Vidya Gopalakrishnan
Software Mentions: 3
Published: over 5 years ago

10.3390/ijms22073393

MIAT Is an Upstream Regulator of NMYC and the Disruption of the MIAT/NMYC Axis Induces Cell Death in NMYC Amplified Neuroblastoma Cell Lines
Cited by: 5
Author(s): Barbara Feriančiková, Tereza Feglarová, Lenka Krsková, Tomáš Eckschlager, Aleš Vícha, Jan Hraběta
Software Mentions: 3
Published: over 5 years ago

10.3389/fmolb.2016.00002

A Computational Solution to Automatically Map Metabolite Libraries in the Context of Genome Scale Metabolic Networks
Cited by: 6
Author(s): Benjamin Merlet, Nils Paulhe, Florence Vinson, Clément Frainay, Maxime Chazalviel, Nathalie Poupin, Yoann Gloaguen, Franck Giacomoni, Fabien Jourdan
Software Mentions: 3
Published: over 10 years ago

10.1038/s41598-017-10245-w

REST, a master regulator of neurogenesis, evolved under strong positive selection in humans and in non human primates
Cited by: 21
Author(s): Alessandra Mozzi, Franca Rosa Guerini, Diego Forni, Andrea Saul Costa, Raffaello Nemni, Francesca Baglio, Monia Cabinio, Stefania Riva, Chiara Pontremoli, Mario Clerici, Manuela Sironi, Rachele Cagliani
Software Mentions: 3
Published: about 9 years ago

10.3892/mmr.2015.3318

PUFA diets alter the microRNA expression profiles in an inflammation rat model
Cited by: 34
Author(s): Zheng Zhang, Yubin Ge, Jinyu Zhang, Meilan Xue, Quan Li, Dongliang Lin, Wenhui Ma
Software Mentions: 3
Published: over 11 years ago

10.1186/s12885-016-2936-3

Global DNA methylation profiling uncovers distinct methylation patterns of protocadherin alpha4 in metastatic and non-metastatic rhabdomyosarcoma
Cited by: 11
Author(s): Lucia Tombolan, Elena Poli, Paolo Martini, Angelica Zin, Caterina Millino, Beniamina Pacchioni, Barbara Celegato, Gianni Bisogno, Chiara Romualdi, Angelo Rosolen, Gerolamo Lanfranchi
Software Mentions: 3
Published: almost 10 years ago

10.1038/srep11148

Disrupted resting-state attentional networks in T2DM patients
Cited by: 47
Author(s): Wenqing Xia, Shaohua Wang, Hengyi Rao, Andrea M. Spaeth, Pin Wang, Yue Yang, Rong Huang, Rongrong Cai, Hao Sun
Software Mentions: 3
Published: over 11 years ago

10.1111/j.1365-2958.2011.07760.x

Multimodal dynamic response of the Buchnera aphidicola pLeu plasmid to variations in leucine demand of its host, the pea aphid Acyrthosiphon pisum
Cited by: 20
Author(s): J. Viñuelas, Gérard Febvay, G. Duport, Stefano Colella, Jean‐Michel Fayard, Hubert Charles, Yvan Rahbé, Federica Calevro
Software Mentions: 3
Published: about 15 years ago

10.1038/s41598-020-61007-0

De novo transcriptome of the diatom Cylindrotheca closterium identifies genes involved in the metabolism of anti-inflammatory compounds
Cited by: 21
Author(s): Ali Murat Elagoz, Luca Ambrosino, Chiara Lauritano
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0248054

Revealing the high variability on nonconserved core and mobile elements of Austropuccinia psidii and other rust mitochondrial genomes
Cited by: 5
Author(s): Jaqueline Raquel de Almeida, Diego Mauricio Riaño-Pachón, Lívia Maria Franceschini, Isaneli Batista dos Santos, Jessica Aparecida Ferrarezi, Pedro Avelino Maia de Andrade, Cláudia Barros Monteiro-Vitorello, Carlos Alberto Labate, Maria Carolina Quecine
Software Mentions: 3
Published: over 5 years ago

10.1186/1471-2164-10-328

Surviving the cold: molecular analyses of insect cryoprotective dehydration in the Arctic springtail Megaphorura arctica (Tullberg)
Cited by: 84
Author(s): Melody S. Clark, Michael A. S. Thorne, Jelena Purać, Gavin Burns, Guy Hillyard, Željko D. Popović, Gordana Grubor-Lajšić, M. R. Worland
Software Mentions: 3
Published: almost 18 years ago

10.1371/journal.pone.0147727

Transcriptomic Determinants of Scrapie Prion Propagation in Cultured Ovine Microglia
Cited by: 12
Author(s): Juan F. Muñoz-Gutiérrez, Sebastián Aguilar Pierlé, David A. Schneider, Timothy V. Baszler, James B. Stanton
Software Mentions: 3
Published: over 10 years ago

10.3389/fgene.2021.630187

CoExp: A Web Tool for the Exploitation of Co-expression Networks
Cited by: 13
Author(s): Sonia García-Ruiz, Ana Luisa Gil-Martínez, Alejandro Cisterna, Federico Jurado-Ruiz, Regina H. Reynolds, Nabec, Mark Cookson, John Hardy, Mina Ryten, Juan A. Botía
Software Mentions: 3
Published: over 5 years ago

10.3390/s19081747

Meaningful Integration of Data from Heterogeneous Health Services and Home Environment Based on Ontology
Cited by: 32
Author(s): Cong Peng, Prashant Goswami
Software Mentions: 3
Published: over 7 years ago

10.1186/s12864-016-2797-9

The biorepository portal toolkit: an honest brokered, modular service oriented software tool set for biospecimen-driven translational research
Cited by: 16
Author(s): Alex Felmeister, Aaron J. Masino, Tyler J. Rivera, Adam Resnick, Jeffrey W. Pennington
Software Mentions: 3
Published: about 10 years ago

10.3390/s21051640

Towards Secure Fitness Framework Based on IoT-Enabled Blockchain Network Integrated with Machine Learning Algorithms
Cited by: 42
Author(s): Faisal Jamil, Hyun Kook Kahng, Su Yeon Kim, Do‐Hyeun Kim
Software Mentions: 3
Published: over 5 years ago

10.1186/s12864-019-5795-x

Transcriptional analysis of renal dopamine-mediated Na+ homeostasis response to environmental salinity stress in Scatophagus argus
Cited by: 10
Author(s): Maoliang Su, Jia Zhou, Zhengyu Duan, Junbin Zhang
Software Mentions: 3
Published: over 7 years ago

10.1186/s12870-018-1373-7

Comparative root transcriptome of wild Arachis reveals NBS-LRR genes related to nematode resistance
Cited by: 24
Author(s): Ana Paula Zotta Mota, Bruna Vidigal, Étienne Danchin, Roberto Coiti Togawa, Soraya C. M. Leal‐Bertioli, David J. Bertioli, Ana Cláudia Guerra Araújo, Ana Cristina Miranda Brasileiro, P. M. Guimarães
Software Mentions: 3
Published: about 8 years ago

10.1186/1471-2229-14-185

Genome-wide analysis reveals divergent patterns of gene expression during zygotic and somatic embryo maturation of Theobroma cacaoL., the chocolate tree
Cited by: 25
Author(s): Siela N. Maximova, Sergio Florez, Xiangling Shen, Nicolas Niemenak, Yufan Zhang, Wayne R. Curtis, Mark J. Guiltinan
Software Mentions: 3
Published: over 12 years ago

10.1038/tp.2016.69

Genome-wide gene-based analysis suggests an association between Neuroligin 1 (NLGN1) and post-traumatic stress disorder
Cited by: 57
Author(s): Varun Kilaru, Subramania Iyer, Lynn M. Almli, Jennifer Stevens, Adriana Lori, Tanja Jovanović, Timothy D. Ely, Bekh Bradley, Elisabeth B. Binder, Nastassja Koen, Dan J. Stein, Karen N. Conneely, Aliza P. Wingo, Alicia K. Smith, Kerry J. Ressler
Software Mentions: 3
Published: over 10 years ago

10.1186/1471-2202-15-11

Genes showing altered expression in the medial preoptic area in the highly social maternal phenotype are related to autism and other disorders with social deficits
Cited by: 33
Author(s): Terri M. Driessen, Brian E. Eisinger, Changjiu Zhao, Sharon A. Stevenson, Michael C. Saul, Stephen C. Gammie
Software Mentions: 3
Published: almost 13 years ago

10.3390/s16101645

From WSN towards WoT: Open API Scheme Based on oneM2M Platforms
Cited by: 13
Author(s): Jae-Ho Kim, Sung-Chan Choi, Il-Yeup Ahn, Nak-Myoung Sung, Jaeseok Yun
Software Mentions: 3
Published: about 10 years ago

10.1038/s41598-019-49410-8

Spodoptera frugiperda transcriptional response to infestation by Steinernema carpocapsae
Cited by: 13
Author(s): Louise Huot, Simon C. George, Pierre-Alain Girard, Dany Séverac, Nicolas Nègre, Bernard Duvic
Software Mentions: 3
Published: about 7 years ago

10.1186/1471-2202-14-69

Abnormal activity of default mode network in GERD patients
Cited by: 4
Author(s): Huihui Sun, Ying Chen, Xiaofeng Zhao, Xiang-Bin Wang, Yilin Jiang, Peng Wu, Yinhan Tang, Qiang Meng, Shuchang Xu
Software Mentions: 3
Published: over 13 years ago

10.1186/s12864-018-4605-1

Genome-wide transcriptional analyses in Anopheles mosquitoes reveal an unexpected association between salivary gland gene expression and insecticide resistance
Cited by: 26
Author(s): Alison T. Isaacs, Henry Mawejje, Sean Tomlinson, Daniel J. Rigden, Martin J. Donnelly
Software Mentions: 3
Published: over 8 years ago

10.3390/s131217292

Mobile Sensing Systems
Cited by: 79
Author(s): Elsa M. Macías, Álvaro Suárez, Jaime Lloret
Software Mentions: 3
Published: almost 13 years ago

10.1186/s12916-021-01962-1

Functional connectivity changes in cerebral small vessel disease - a systematic review of the resting-state MRI literature
Cited by: 22
Author(s): Maximilian Schulz, Caroline Malherbe, Bastian Cheng, Götz Thomalla, Eckhard Schlemm
Software Mentions: 3
Published: over 5 years ago

10.3390/s17102159

ROSA: Resource-Oriented Service Management Schemes for Web of Things in a Smart Home
Cited by: 8
Author(s): Chun-Feng Liao, Pengyu Chen
Software Mentions: 3
Published: about 9 years ago

10.3390/s18072052

A Plug-and-Play Human-Centered Virtual TEDS Architecture for the Web of Things
Cited by: 29
Author(s): Dixys Hernández Rojas, Tiago M. Fernández‐Caramés, Paula Fraga‐Lamas, Carlos J. Escudero
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0093489

The Mechanisms Underlying α-Amanitin Resistance in Drosophila melanogaster: A Microarray Analysis
Cited by: 17
Author(s): Chelsea L. Mitchell, Michael C. Saul, Liang Liu, Hairong Wei, Thomas Werner
Software Mentions: 3
Published: over 12 years ago

10.1186/1471-2164-11-165

Depletion of the non-coding regulatory 6S RNA in E. coli causes a surprising reduction in the expression of the translation machinery
Cited by: 53
Author(s): Thomas Neußer, Tino Polen, René Geißen, Rolf Wagner
Software Mentions: 3
Published: over 16 years ago

10.3389/fpls.2016.01810

The Eucalyptus Tonoplast Intrinsic Protein (TIP) Gene Subfamily: Genomic Organization, Structural Features, and Expression Profiles
Cited by: 9
Author(s): Marcela Iara Rodrigues, Agnes Alessandra Sekijima Takeda, Juliana Pereira Bravo, Ivan de Godoy Maia
Software Mentions: 3
Published: almost 10 years ago

10.12688/f1000research.14612.2

eXamine: Visualizing annotated networks in Cytoscape
Cited by: 3
Author(s): Philipp Spohr, Kasper Dinkla, Gunnar W. Klau, Mohammed El-Kebir
Software Mentions: 3
Published: over 8 years ago

10.1186/1471-2164-15-462

Effects of functional feeds on the lipid composition, transcriptomic responses and pathology in heart of Atlantic salmon (Salmo salar L.) before and after experimental challenge with Piscine Myocarditis Virus (PMCV)
Cited by: 34
Author(s): Laura Martínez-Rubio, Øystein Evensen, Aleksei Krasnov, Sven Martin Jørgensen, Simón Wadsworth, Kari Ruohonen, Jose L. González Vecino, Douglas R. Tocher
Software Mentions: 3
Published: almost 13 years ago

10.3389/fpls.2018.00314

The Role of Programmed Cell Death Regulator LSD1 in Nematode-Induced Syncytium Formation
Cited by: 12
Author(s): Mateusz Matuszkiewicz, Mirosław Sobczak, Javier Cabrera, Carolina Escobar, Stanisław Karpiński, Marcin Filipecki
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0080467

Runx3-mediated Transcriptional Program in Cytotoxic Lymphocytes
Cited by: 56
Author(s): Joseph Lotem, Ditsa Levanon, Varda Negreanu, Dena Leshkowitz, Gérard Friedlander, Yoram Groner
Software Mentions: 3
Published: almost 13 years ago

10.3390/s20102990

IoT-Blockchain Enabled Optimized Provenance System for Food Industry 4.0 Using Advanced Deep Learning
Cited by: 129
Author(s): Prince Waqas Khan, Yung-Cheol Byun, Namje Park
Software Mentions: 3
Published: over 6 years ago

10.3389/fnbeh.2014.00388

Addiction and reward-related genes show altered expression in the postpartum nucleus accumbens
Cited by: 31
Author(s): Changjiu Zhao, Brian E. Eisinger, Terri M. Driessen, Stephen C. Gammie
Software Mentions: 3
Published: almost 12 years ago

10.3389/fcell.2021.692517

Distinct Gene Expression Patterns of Two Heat Shock Protein 70 Members During Development, Diapause, and Temperature Stress in the Freshwater Crustacean Daphnia magna
Cited by: 3
Author(s): Luxi Chen, Rocío Gómez, Linda C. Weiss
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2017.00882

Metabolome Dynamics of Smutted Sugarcane Reveals Mechanisms Involved in Disease Progression and Whip Emission
Cited by: 21
Author(s): Patrícia Dayane Carvalho Schaker, Leila Priscila Peters, Thaís Regiani Cataldi, Carlos Alberto Labate, Camila Caldana, Cláudia Barros Monteiro-Vitorello
Software Mentions: 3
Published: over 9 years ago

10.3389/fnbeh.2014.00110

Medial prefrontal cortex: genes linked to bipolar disorder and schizophrenia have altered expression in the highly social maternal phenotype
Cited by: 21
Author(s): Brian E. Eisinger, Terri M. Driessen, Changjiu Zhao, Stephen C. Gammie
Software Mentions: 3
Published: over 12 years ago

10.1186/s12864-018-4439-x

mORCA: ubiquitous access to life science web services
Cited by: 1
Author(s): Sergio Díaz-del-Pino, Oswaldo Trelles, Juan Falgueras
Software Mentions: 3
Published: almost 9 years ago

10.1371/journal.pone.0221170

Inter-genus gene expression analysis in livestock fibroblasts using reference gene validation based upon a multi-species primer set
Cited by: 4
Author(s): Marcelo Tigre Moura, Roberta L. O. Silva, Pábola Santos Nascimento, José Carlos Ferreira-Silva, Ludymila Furtado Cantanhêde, Éderson Akio Kido, Ana Maria Benko‐Iseppon, Marcos Antônio Lemos Oliveira
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0206583

Test-retest reliability of task-based and resting-state blood oxygen level dependence and cerebral blood flow measures
Cited by: 46
Author(s): Štefan Holiga, Fabio Sambataro, Cécile Luzy, Gérard Greig, Neena Sarkar, Remco Renken, Jan-Bernard C Marsman, Scott Schobel, Alessandro Bertolino, Juergen Dukart
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0229513

The RNA-seq transcriptomic analysis reveals genes mediating salt tolerance through rapid triggering of ion transporters in a mutant barley
Cited by: 24
Author(s): Sareh Yousefirad, Hassan Soltanloo, Seyedeh Sanaz Ramezanpour, Khalil Zaynali Nezhad, Vahid Shariati
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2164-15-754

Transcriptome profiling of natural dichromatism in the annual fishes Nothobranchius furzeri and Nothobranchius kadleci
Cited by: 21
Author(s): Enoch Ng’oma, Marco Groth, Roberto Ripa, Matthias Platzer, Alessandro Cellerino
Software Mentions: 3
Published: about 12 years ago

10.3389/fgene.2021.662843

Effect of the Expression of ELOVL5 and IGFBP6 Genes on the Metastatic Potential of Breast Cancer Cells
Cited by: 5
Author(s): С. В. Никулин, Г. С. Захарова, Andrey Poloznikov, M. P. Raigorodskaya, Daniel Wicklein, Udo Schumacher, Stepan Nersisyan, Jonas Bergquist, Georgy Bakalkin, Л. В. Астахова, Alexander G. Tonevitsky
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0077490

Transcriptional Reprogramming of CD11b+Esamhi Dendritic Cell Identity and Function by Loss of Runx3
Cited by: 29
Author(s): Joseph Dicken, Alexander Mildner, Dena Leshkowitz, Ivo P. Touw, Shay Hantisteanu, Steffen Jung, Yoram Groner
Software Mentions: 3
Published: about 13 years ago

10.3390/s20164393

A Model for the Remote Deployment, Update, and Safe Recovery for Commercial Sensor-Based IoT Systems
Cited by: 1
Author(s): Alexandru Radovici, Ioana Culic, Daniel E. Rosner, Flavia Oprea
Software Mentions: 3
Published: about 6 years ago

10.1186/1756-0500-3-255

Expression analysis of flavonoid biosynthesis genes during Arabidopsis thaliana silique and seed development with a primary focus on the proanthocyanidin biosynthetic pathway
Cited by: 48
Author(s): Christiane Katja Kleindt, Ralf Stracke, Marcus Frank, Bernd Weißhaar
Software Mentions: 3
Published: about 16 years ago

10.12688/f1000research.10750.2

General guidelines for biomedical software development
Cited by: 11
Author(s): Luís A. Bastião Silva, Rafael C. Jiménez, Niklas Blomberg, José Luís Oliveira
Software Mentions: 3
Published: over 9 years ago

10.1371/journal.pone.0035549

Transcriptional Portrait of Actinobacillus pleuropneumoniae during Acute Disease - Potential Strategies for Survival and Persistence in the Host
Cited by: 32
Author(s): Kirstine Klitgaard, Carsten Friis, Tim Kåre Jensen, Øystein Angen, Mette Boye
Software Mentions: 2
Published: over 14 years ago

10.1038/s41598-018-37546-y

Toxicity of diatom-derived polyunsaturated aldehyde mixtures on sea urchin Paracentrotus lividus development
Cited by: 6
Author(s): Nadia Ruocco, Concetta Annunziata, Adrianna Ianora, Giovanni Libralato, Loredana Manfra, Susan Costantini, Maria Costantini
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0062865

Deep Sequencing Reveals Transcriptome Re-Programming of Taxus × media Cells to the Elicitation with Methyl Jasmonate
Cited by: 67
Author(s): Guiling Sun, Yongqiang Yang, Fuliang Xie, Jianfan Wen, Jianqiang Wu, Iain W. Wilson, Qi Tang, Hongwei Liu, Deyou Qiu
Software Mentions: 2
Published: over 13 years ago

10.1186/s12888-016-1190-1

Altered fractional amplitude of low frequency fluctuation associated with cognitive dysfunction in first-episode drug-naïve major depressive disorder patients
Cited by: 32
Author(s): Manli Huang, Shengyong Lu, Liang Yu, Lingjiang Li, Peng Zhang, Jianbo Hu, Weihua Zhou, Shaohua Hu, Ning Wei, Jinwen Huang, Jian Weng, Yi Xu
Software Mentions: 2
Published: almost 10 years ago

10.1186/1755-8794-5-33

The effects of MicroRNA transfections on global patterns of gene expression in ovarian cancer cells are functionally coordinated
Cited by: 29
Author(s): Shubin Shahab, Lilya V. Matyunina, Christopher G. Hill, Limin Wang, Roman Mezencev, L. DeEtte Walker, John F. McDonald
Software Mentions: 2
Published: about 14 years ago

10.1186/s13059-014-0532-x

Proteomics informed by transcriptomics reveals Hendra virus sensitizes bat cells to TRAIL-mediated apoptosis
Cited by: 6
Author(s): James W. Wynne, Brian J. Shiell, Glenn A. Marsh, Victoria Boyd, Jennifer Harper, Kate J Heesom, Paul Monaghan, Peng Zhou, Jean Payne, Reuben Klein, Shawn Todd, Lawrence Mok, Diane Green, John Bingham, Mary Tachedjian, Michelle L. Baker, David A. Matthews, Lin‐Fa Wang
Software Mentions: 2
Published: almost 12 years ago

10.3390/s141222737

Virtualization of Event Sources in Wireless Sensor Networks for the Internet of Things
Cited by: 9
Author(s): Néstor Lucas Martínez, José-Fernán Martínez-Ortega, Vicente Hernández Díaz
Software Mentions: 2
Published: almost 12 years ago

10.1186/s12888-016-1047-7

Association between abnormal default mode network activity and suicidality in depressed adolescents
Cited by: 125
Author(s): Shuang Zhang, Jianmei Chen, Li Kuang, Jian Cao, Han Zhang, Ming Ai, Wo Wang, Shudong Zhang, Suya Wang, Shijing Liu, Weidong Fang
Software Mentions: 2
Published: about 10 years ago

10.1186/s12888-020-02831-6

Emotion reactivity-related brain network analysis in generalized anxiety disorder: a task fMRI study
Cited by: 12
Author(s): Jian Li, Yuan Zhong, Zijuan Ma, Yun Wu, Manlong Pang, Chiyue Wang, Na Liu, Chun Wang, Ning Zhang
Software Mentions: 2
Published: about 6 years ago

10.1186/s12870-018-1244-2

Diel pattern of circadian clock and storage protein gene expression in leaves and during seed filling in cowpea (Vigna unguiculata)
Cited by: 13
Author(s): Julia Weiß, Marta I. Terry, Marina Martos-Fuentes, Lisa Letourneux, Victoria Ruiz-Hernández, Juan Antonio Fernández Hernández, Marcos Egea‐Cortines
Software Mentions: 2
Published: over 8 years ago

10.1186/1471-2164-14-607

RNA-seq analyses of gene expression in the microsclerotia of Verticillium dahliae
Cited by: 69
Author(s): Dechassa Duressa, Amy Anchieta, Dongquan Chen, Anna Klimes, Maria D. García-Pedrajas, Katherine F. Dobinson, Steven J. Klosterman
Software Mentions: 2
Published: about 13 years ago

10.1038/s41598-021-81040-x

Nerve Growth Factor (NGF) modulates in vitro induced myofibroblasts by highlighting a differential protein signature
Cited by: 3
Author(s): Graziana Esposito, Bijorn Omar Balzamino, Egidio Stigliano, Filippo Biamonte, Andrea Urbani, Alessandra Micera
Software Mentions: 2
Published: almost 6 years ago

10.1186/gb-2009-10-7-r81

Zebrafish reward mutants reveal novel transcripts mediating the behavioral effects of amphetamine
Cited by: 71
Author(s): Katharine J Webb, William Norton, Dietrich Trümbach, Annemarie H. Meijer, Jovica Ninkovic, Stefanie Topp, Daniel W. Heck, Carsten Marr, Wolfgang Wurst, Fabian J. Theis, Herman P. Spaink, Laure Bally‐Cuif
Software Mentions: 2
Published: almost 18 years ago

10.1186/1471-2164-12-423

Testing the importance of jasmonate signalling in induction of plant defences upon cabbage aphid (Brevicoryne brassicae) attack
Cited by: 57
Author(s): Anna Kuśnierczyk, Diem Hong Tran, Per Winge, Tommy S Jørstad, John C. Reese, Joanna Troczyńska, Atle M. Bones
Software Mentions: 2
Published: about 15 years ago

10.3390/s21072433

A Comparative Analysis of Honeypots on Different Cloud Platforms
Cited by: 11
Author(s): Carmel Kelly, Nikolaos Pitropakis, Alexios Mylonas, Sean McKeown, William J. Buchanan
Software Mentions: 2
Published: over 5 years ago

10.18632/oncotarget.17944

Disrupted functional connectivity between perirhinal and parahippocampal cortices with hippocampal subfields in patients with mild cognitive impairment and Alzheimer's disease
Cited by: 4
Author(s): Yu Sun, Yafei Wang, Jiaming Lu, Rengyuan Liu, Christopher G. Schwarz, Hui Zhao, Yue Zhang, Lu Xu, Bin Zhu, Bing Zhang, Bing Liu, Shui Wan, Yun Xu
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2164-13-448

Effects of genotype and dietary fish oil replacement with vegetable oil on the intestinal transcriptome and proteome of Atlantic salmon (Salmo salar)
Cited by: 92
Author(s): Sofía Morais, Tomé S. Silva, Odete Cordeiro, Pedro M. Rodrigues, D. R. Guy, James E. Bron, John B. Taggart, J. Gordon Bell, Douglas R. Tocher
Software Mentions: 2
Published: almost 15 years ago

10.1038/s41398-019-0590-7

Precocious myelination in a mouse model of autism
Cited by: 20
Author(s): Maryam Khanbabaei, Elizabeth D. Hughes, Jacob Ellegood, Lily R. Qiu, Raven Yip, Jenna Dobry, Kartikeya Murari, Jason P. Lerch, Jong M. Rho, Ning Cheng
Software Mentions: 2
Published: about 7 years ago

10.1016/j.scs.2020.102315

REST framework: A modelling approach towards cooling energy stress mitigation plans for future cities in warming Global South
Cited by: 9
Author(s): Ronita Bardhan, Ramit Debnath, João Gama, Upadhi Vijay
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0013450

Chronic Hypoxia Impairs Muscle Function in the Drosophila Model of Duchenne's Muscular Dystrophy (DMD)
Cited by: 17
Author(s): Matías Mosqueira, Gabriel Willmann, Hannele Ruohola‐Baker, Tejvir S. Khurana
Software Mentions: 2
Published: about 16 years ago

10.3390/s21144932

Towards Smart Home Automation Using IoT-Enabled Edge-Computing Paradigm
Cited by: 52
Author(s): Hikmat Yar, Ali Shariq Imran, Zulfiqar Ahmad Khan, Muhammad Sajjad, Zenun Kastrati
Software Mentions: 2
Published: over 5 years ago

10.1186/1751-0473-9-19

EC2KEGG: a command line tool for comparison of metabolic pathways
Cited by: 15
Author(s): Aleksey Porollo
Software Mentions: 2
Published: about 12 years ago

10.1128/JVI.00876-19

Transcriptional Response of Ovine Lung to Infection with Jaagsiekte Sheep Retrovirus
Cited by: 12
Author(s): Anna Eleonora Karagianni, Deepali Vasoya, J. Finlayson, Henny Martineau, Ann R. Wood, Chris Cousens, Mark P. Dagleish, Michael Watson, David J. Griffiths
Software Mentions: 2
Published: almost 7 years ago

10.3390/s19143076

CATSWoTS: Context Aware Trustworthy Social Web of Things System
Cited by: 11
Author(s): Sabeen Javaid, Hammad Afzal, Fahim Arif, Naima Iltaf, Haider Abbas, Waseem Iqbal
Software Mentions: 2
Published: over 7 years ago

10.3390/s19010100

Architecture to Embed Software Agents in Resource Constrained Internet of Things Devices
Cited by: 11
Author(s): Daniel Hernández de la Iglesia, Gabriel Villarrubia González, André Sales Mendes, Diego M. Jiménez-Bravo, Alberto López Barriuso
Software Mentions: 2
Published: almost 8 years ago

10.1186/1471-2164-11-455

Gene expression profiling in the lungs of pigs with different susceptibilities to Glässer's disease
Cited by: 23
Author(s): Jamie M. Wilkinson, Carole A. Sargent, L. Galina-Pantoja, Alexander W. Tucker
Software Mentions: 2
Published: almost 17 years ago

10.3390/s18092994

Urban Planning and Smart City Decision Management Empowered by Real-Time Data Processing Using Big Data Analytics
Cited by: 78
Author(s): Bhagya Nathali Silva, Murad Khan, Changsu Jung, Jihun Seo, Muhammad Diyan, Jing Han, Yongtak Yoon, Kijun Han
Software Mentions: 2
Published: about 8 years ago

10.3390/s18020537

An IoT-Based Gamified Approach for Reducing Occupants’ Energy Wastage in Public Buildings
Cited by: 26
Author(s): Thanasis G. Papaioannou, Nikos Dimitriou, Kostas Vasilakis, Anthony Schoofs, Manolis Nikiforakis, Fabian Pursche, Nikolay Deliyski, Amr Taha, Dimosthenis Kotsopoulos, Cleopatra Bardaki, Sarantis Kotsilitis, Anastasia Garbi
Software Mentions: 2
Published: over 8 years ago

10.3390/s19010006

EEG-Based Identity Authentication Framework Using Face Rapid Serial Visual Presentation with Optimized Channels
Cited by: 23
Author(s): Ying Zeng, Qunjian Wu, Kai Yang, Tong Li, Bin Yan, Jun Shu, Dezhong Yao
Software Mentions: 2
Published: almost 8 years ago

10.18632/oncotarget.27693

Differentially expressed full-length, fusion and novel isoforms transcripts-based signature of well-differentiated keratinized oral squamous cell carcinoma
Cited by: 9
Author(s): Neetu Singh, Dinesh Kumar Sahu, Ratnesh Kumar Tripathi, Archana Mishra, Hari Shyam, Pratap Shankar, Mayank Jain, Nawazish Alam, Anil Kumar, Abhishek Mishra, Rebecca Chowdhry, Anjana Singh, Sudeep Gupta, Divya Mehrotra, Preeti Agarwal, Madhu Mati Goel, Arun Chaturvedi, Saurabh Agarwal, Manish Kumar Bajpai, Devendra K. Gupta, Madan Lal Brahma Bhatt, Ravi Kant
Software Mentions: 2
Published: about 6 years ago

10.1186/1479-5876-10-186

Circulating miR-200c as a diagnostic and prognostic biomarker for gastric cancer
Cited by: 137
Author(s): Manuel Valladares‐Ayerbes, Margarita Reboredo, V. Medina-Villaamil, Pilar Iglesias-Díaz, María J. Lorenzo-Patiño, Mar Haz, Isabel Santamarina, Miguel Blanco, Juan Fernández‐Tajes, María Quindós, Alberto Carral, Angélica Figueroa, Luis Antón-Aparicio, Lourdes Calvo
Software Mentions: 2
Published: about 14 years ago

10.1155/2018/5045734

Antifibrotic Effect of Marine Ovothiol in an <i>In Vivo</i> Model of Liver Fibrosis
Cited by: 23
Author(s): Mariarita Brancaccio, Giuseppe D’Argenio, Vincenzo Lembo, Anna Palumbo, Immacolata Castellano
Software Mentions: 2
Published: almost 8 years ago

10.3390/s16091360

A Participatory Agent-Based Simulation for Indoor Evacuation Supported by Google Glass
Cited by: 11
Author(s): Jesús M. Sánchez, Álvaro Carrera, Carlos Á. Iglesias, Emilio Serrano
Software Mentions: 2
Published: about 10 years ago

10.3390/s140814070

A Cloud-Based Internet of Things Platform for Ambient Assisted Living
Cited by: 103
Author(s): Javier Cubo, Ana Nieto, Ernesto Pimentel
Software Mentions: 2
Published: about 12 years ago

10.3390/s16122142

Evaluation of Google Glass Technical Limitations on Their Integration in Medical Systems
Cited by: 19
Author(s): Antonio Martínez-Millana, Jose-Luis Bayo-Monton, Aroa Lizondo, Carlos Fernández-Llatas
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12864-015-1526-0

Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype
Cited by: 31
Author(s): Alexander Lichius, Frédérique Bidard, Franziska Buchholz, Stéphane Le Crom, Joel Martin, Wendy Schackwitz, Tina Austerlitz, Igor V. Grigoriev, Scott E. Baker, Antoine Margeot, Bernhard Schink, Christian P. Kubicek
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-020-67391-x

Evolutionary-driven C-MYC gene expression in mammalian fibroblasts
Cited by: 4
Author(s): Marcelo Tigre Moura, Roberta L. O. Silva, Ludymila Furtado Cantanhêde, José Carlos Ferreira-Silva, Pábola Santos Nascimento, Ana Maria Benko‐Iseppon, Marcos Antônio Lemos Oliveira
Software Mentions: 2
Published: over 6 years ago

10.3390/s140509227

RESTful Discovery and Eventing for Service Provisioning in Assisted Living Environments
Cited by: 9
Author(s): Jorge Parra, M. Shamim Hossain, Aitor Uribarren, Eduardo Jacob
Software Mentions: 2
Published: over 12 years ago

10.3390/s17020332

A Web of Things-Based Emerging Sensor Network Architecture for Smart Control Systems
Cited by: 35
Author(s): Murad Khan, Bhagya Nathali Silva, Kijun Han
Software Mentions: 2
Published: over 9 years ago

10.3390/s20133770

A WoT Platform for Supporting Full-Cycle IoT Solutions from Edge to Cloud Infrastructures: A Practical Case
Cited by: 7
Author(s): Rafael Vargas, Llanos Tobarra, Antonio Robles-Gómez, Sergio Martín, Roberto Hernández, Jesús Cano
Software Mentions: 2
Published: over 6 years ago

Projects: cran: REST

Science Score: 75/100

Penalties:

Papers Mentioning REST 1,757