Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: RANKS

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/RANKS

Ranking of Nodes with Kernelized Score Functions
2 versions
Latest release: almost 2 years ago
254 downloads last month

Papers Mentioning RANKS 8

Benchmarking network propagation methods for disease gene identification
Cited by: 29
Author(s): Sergio Picart‐Armada, Steven J. Barrett, David Willé, Alexandre Perera-Lluna, Alex Gutteridge, Benoît H. Dessailly
Software Mentions: 9
Published: about 5 years ago

10.1111/acel.13331

A novel p53 regulator, C16ORF72/TAPR1, buffers against telomerase inhibition
Cited by: 16
Author(s): Yahya Benslimane, María Sánchez-Osuna, Jasmin Coulombe-Huntington, Thierry Bertomeu, Danielle Henry, Caroline Huard, Éric Bonneil, Pierre Thibault, Mike Tyers, Lea Harrington
Software Mentions: 5
Published: over 3 years ago

10.1093/gigascience/gix111

ProphTools: general prioritization tools for heterogeneous biological networks
Cited by: 10
Author(s): Carmen Navarro, Víctor R. Martínez, Armando Blanco, Carlos Cano
Software Mentions: 5
Published: almost 7 years ago

10.1186/s12859-017-1854-y

Prediction of Human Phenotype Ontology terms by means of hierarchical ensemble methods
Cited by: 20
Author(s): Marco Notaro, Max Schubach, Peter N. Robinson, Giorgio Valentini
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pcbi.1007078

Disease gene prediction for molecularly uncharacterized diseases
Cited by: 26
Author(s): Juan José Orellana Cáceres, Alberto Paccanaro
Software Mentions: 2
Published: about 5 years ago

10.1093/bioinformatics/btaa1069

MultiPaths: a Python framework for analyzing multi-layer biological networks using diffusion algorithms
Cited by: 3
Author(s): Josep Marín-Llaó, Sarah Mubeen, Alexandre Perera-Lluna, Martin Hofmann-Apitius, Sergio Picart‐Armada, Daniel Domingo‐Fernándéz
Software Mentions: 2
Published: over 3 years ago

10.7717/peerj.5298

HPO2GO: prediction of human phenotype ontology term associations for proteins using cross ontology annotation co-occurrences
Cited by: 26
Author(s): Tunca Doğan
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.51163

Robust cullin-RING ligase function is established by a multiplicity of poly-ubiquitylation pathways
Cited by: 25
Author(s): Spencer Hill, Kurt M. Reichermeier, Daniel C. Scott, Lorena Samentar, Jasmin Coulombe-Huntington, Luisa Izzi, Xiaojing Tang, Rebeca Ibarra, Thierry Bertomeu, Annie Moradian, Michael J. Sweredoski, Nora B. Caberoy, Brenda A. Schulman, Frank Sicheri, Mike Tyers, Gary Kleiger
Software Mentions: 1
Published: over 4 years ago