Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1007276

https://doi.org/10.1371/journal.pcbi.1007276

Benchmarking network propagation methods for disease gene identification

Cited by: 29
Author(s): Sergio Picart‐Armada, Steven J. Barrett, David Willé, Alexandre Perera-Lluna, Alex Gutteridge, Benoît H. Dessailly
Published: over 5 years ago

Software Mentions 9

bioconductor: COSNet

Cost Sensitive Network for node label prediction on graphs with highly unbalanced labelings
Papers that mentioned: 8

bioconductor: diffuStats

Diffusion scores on biological networks
Papers that mentioned: 3

bioconductor: EGAD

Extending guilt by association by degree
Papers that mentioned: 19

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: kernlab

Kernel-Based Machine Learning Lab
Papers that mentioned: 157

cran: randomForest

Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447

cran: RANKS

Ranking of Nodes with Kernelized Score Functions
Papers that mentioned: 8

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555