Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: PopGenReport

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PopGenReport

A Simple Framework to Analyse Population and Landscape Genetic Data
13 versions
Latest release: about 1 year ago
1 dependent package
1,634 downloads last month

Papers Mentioning PopGenReport 35

10.1186/s12915-021-01029-w
Global population genetic structure and demographic trajectories of the black soldier fly, Hermetia illucens
Cited by: 36
Author(s): Cengiz Kaya, Tomas N Generalovic, Gunilla Ståhls, Martin Hauser, Ana Clariza Samayoa, Carlos Gustavo Nunes-Silva, Heather Roxburgh, Jens Wohlfahrt, Ebenezer Ato Ewusie, Marc Kenis, Yupa Hanboonsong, Jesús Orozco, Nancy Carrejo, Satoshi Nakamura, Laura Gasco, Santos Rojo, Chrysantus M. Tanga, Rudolf Meier, Clint Rhode, Christine Picard, Chris D. Jiggins, Florian Leiber, Jeffery K. Tomberlin, Martin Hasselmann, Wolf U. Blanckenhorn, Martin Kapun, Christoph Sandrock
Software Mentions: 10
Published: over 3 years ago
10.1038/s41437-021-00418-9
Population genomics and conservation management of a declining tropical rodent
Cited by: 9
Author(s): Brenton von Takach, Cara E. Penton, Brett P. Murphy, Ian J. Radford, Hugh F. Davies, Brydie M. Hill, Sam C. Banks
Software Mentions: 9
Published: over 3 years ago
10.7717/peerj.5660
Population genetics of the main population of brown bears in southwest Asia
Cited by: 37
Author(s): Hüseyin Ambarlı, Deniz Mengüllüoğlu, Jörns Fickel, Daniel W. Förster
Software Mentions: 7
Published: about 6 years ago
10.1002/ece3.4905
Comparing RADseq and microsatellites for estimating genetic diversity and relatedness — Implications for brown trout conservation
Cited by: 111
Author(s): Alexandre Lemopoulos, Jenni M. Prokkola, Silva Uusi‐Heikkilä, Anti Vasemägi, Ari Huusko, Pekka Hyvärinen, Marja‐Liisa Koljonen, Jarmo Koskiniemi, Anssi Vainikka
Software Mentions: 7
Published: almost 6 years ago
10.3390/genes12050637
Insight into the Genetic Population Structure of Wild Red Foxes in Poland Reveals Low Risk of Genetic Introgression from Escaped Farm Red Foxes
Cited by: 2
Author(s): Heliodor Wierzbicki, Magdalena Zatoń‐Dobrowolska, Anna Mucha, Magdalena Moska
Software Mentions: 7
Published: over 3 years ago
10.3389/fpls.2018.00029
Population Genetic Structure in Glyphosate-Resistant and -Susceptible Palmer Amaranth (Amaranthus palmeri) Populations Using Genotyping-by-sequencing (GBS)
Cited by: 26
Author(s): Anita Küpper, Harish Manmathan, Darci A. Giacomini, Eric Patterson, William B. McCloskey, Todd A. Gaines
Software Mentions: 7
Published: almost 7 years ago
10.1002/ece3.5619
Post‐Pleistocene differentiation in a Central Interior Highlands endemic salamander
Cited by: 4
Author(s): Jacob J. Burkhart, Emily E. Puckett, Chelsey J. Beringer, Christine Sholy, Raymond D. Semlitsch, Lori S. Eggert
Software Mentions: 6
Published: about 5 years ago
10.1002/ece3.7481
The effect of sampling density and study area size on landscape genetics inferences for the Mississippi slimy salamander (<i>Plethodon mississippi</i>)
Cited by: 2
Author(s): Stephanie M. Burgess, Ryan C. Garrick
Software Mentions: 6
Published: over 3 years ago
10.1002/ece3.4050
A spatial genetics approach to inform vector control of tsetse flies (<i>Glossina fuscipes fuscipes</i>) in Northern Uganda
Cited by: 9
Author(s): Norah P. Saarman, Mary K. Burak, Robert Opiro, Chaz Hyseni, Richard Echodu, Kirstin Dion, Elizabeth A. Opiyo, William A. Dunn, Giuseppe Amatulli, Serap Aksoy, Adalgisa Caccone
Software Mentions: 6
Published: over 6 years ago
10.1371/journal.pone.0231809
Genetic and demographic vulnerability of adder populations: Results of a genetic study in mainland Britain
Cited by: 3
Author(s): Sarah E. Ball, Nigel Hand, Faye Willman, Chris Durrant, Tobias Uller, Katja Claus, Joachim Mergeay, Dirk Bauwens, Trenton W. J. Garner
Software Mentions: 5
Published: over 4 years ago
10.7717/peerj.9722
Population genomics reveals a mismatch between management and biological units in green abalone (<i>Haliotis fulgens</i>)
Cited by: 9
Author(s): Paulina Mejía-Ruíz, Ricardo Pérez‐Enríquez, Jorge Alberto Mares-Mayagoitia, Fausto Valenzuela‐Quiñonez
Software Mentions: 5
Published: over 4 years ago
10.1038/s41437-021-00455-4
Genomic methods reveal independent demographic histories despite strong morphological conservatism in fish species
Cited by: 2
Author(s): Jessika M. M. Neves, Zachary J Nolen, Nídia Noemi Fabré, Tamí Mott, Ricardo José Garcia Pereira
Software Mentions: 4
Published: over 3 years ago
10.3390/genes11121503
Seascape Genomics of the Sugar Kelp Saccharina latissima along the North Eastern Atlantic Latitudinal Gradient
Cited by: 14
Author(s): Jaromir Guzinski, Paolo Ruggeri, Marion Ballenghien, Stéphane Mauger, Bertrand Jacquemin, Chloé Jollivet, Jérôme Coudret, Lucie Jaugeon, Christophe Destombe, Myriam Valéro
Software Mentions: 4
Published: almost 4 years ago
10.1186/s12862-020-01690-9
Genotypic similarities among the parthenogenetic Darevskia rock lizards with different hybrid origins
Cited by: 9
Author(s): David Tarkhnishvili, Alexey Yanchukov, Mehmet Kürşat Şahin, Mariam Gabelaia, Marine Murtskhvaladze, Kamίl Candan, Eduard Galoyan, Marine Arakelyan, Giorgi Iankoshvili, Yusuf Kumlutaş, Çetίn Ilgaz, Ferhat Matur, Faruk Çolak, Meriç Erdolu, Sofiko Kurdadze, Natia Barateli, Cort L. Anderson
Software Mentions: 4
Published: about 4 years ago
10.1002/ece3.7519
Demographic and ecogeographic factors limit wild grapevine spread at the southern edge of its distribution range
Cited by: 2
Author(s): Oshrit Rahimi, Noa Ohana‐Levi, Hodaya Brauner, Nimrod Inbar, Sariel Hübner, Elyashiv Drori
Software Mentions: 4
Published: over 3 years ago
10.1002/ece3.6154
Limited dispersal and an unexpected aggression pattern in a native supercolonial ant
Cited by: 5
Author(s): Sanja Maria Hakala, Mats Ittonen, Perttu Seppä, Heikki Helanterä
Software Mentions: 3
Published: over 4 years ago
10.1002/ece3.3060
The influence of breeding phenology on the genetic structure of four pond‐breeding salamanders
Cited by: 14
Author(s): Jacob J. Burkhart, William E. Peterman, Emily R. Brocato, Kimberly M. Romine, M. Madeline S. Willis, Brittany H. Ousterhout, Thomas L. Anderson, Dana L. Drake, Freya E. Rowland, Raymond D. Semlitsch, Lori S. Eggert
Software Mentions: 3
Published: over 7 years ago
10.1186/s12862-018-1339-2
Testing the devil’s impact on southern Baltic and North Sea basins whitefish (Coregonus spp.) diversity
Cited by: 4
Author(s): Thomas Mehner, Kirsten Pohlmann, David Bittner, Jörg Freyhof
Software Mentions: 3
Published: almost 6 years ago
10.1371/journal.pone.0189234
Genetic diversity and differentiation among insular honey bee populations in the southwest Indian Ocean likely reflect old geographical isolation and modern introductions
Cited by: 14
Author(s): Maéva Angélique Techer, Johanna Clémencet, Christophe Simiand, Patrick Turpin, Lionel Garnery, Bernard Reynaud, Hélène Delatte
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0185867
Genetic structure in the southernmost populations of black-and-gold howler monkeys (Alouatta caraya) and its conservation implications
Cited by: 20
Author(s): Luciana Inés Oklander, Carolina Isabel Miño, Guillermina Fernández, Mariela Caputo, Daniel Corach
Software Mentions: 3
Published: about 7 years ago
10.1186/s12862-021-01920-8
Genetic relationships between sympatric and allopatric Coregonus ciscoes in North and Central Europe
Cited by: 3
Author(s): Thomas Mehner, Stefan Palm, Bo Delling, Juha Karjalainen, Jolanta Kiełpińska, Asja Vogt, Joerg Freyhof
Software Mentions: 3
Published: about 3 years ago
10.1002/ece3.5685
Landscape genetics reveals unique and shared effects of urbanization for two sympatric pool‐breeding amphibians
Cited by: 18
Author(s): Jared J. Homola, Cynthia S. Loftin, Michael T. Kinnison
Software Mentions: 3
Published: about 5 years ago
10.1186/s13071-020-04328-3
Molecular epidemiology of a fatal sarcoptic mange epidemic in endangered San Joaquin kit foxes (Vulpes macrotis mutica)
Cited by: 11
Author(s): Jaime L. Rudd, Deana L. Clifford, Brian L. Cypher, Joshua M. Hull, A. Jane Riner, Janet E. Foley
Software Mentions: 3
Published: about 4 years ago
10.1111/eva.12642
Measures of effective population size in sea otters reveal special considerations for wide-ranging species
Cited by: 18
Author(s): Roderick B. Gagne, M. Timothy Tinker, Kyle D. Gustafson, Katherine Ralls, Shawn Larson, L. Max Tarjan, Melissa A. Miller, Holly B. Ernest
Software Mentions: 3
Published: over 6 years ago
10.3389/fmicb.2020.579929
Population Genetic Analysis of the Theileria annulata Parasites Identified Limited Diversity and Multiplicity of Infection in the Vaccine From India
Cited by: 12
Author(s): Sonti Roy, Vasundhra Bhandari, Madhumanti Barman, Pankaj Kumar, Vandna Bhanot, Jaspreet Singh Arora, Sanjeev Singh, Paresh Sharma
Software Mentions: 3
Published: almost 4 years ago
10.1038/s42003-020-01632-7
Adaptive evolution in a conifer hybrid zone is driven by a mosaic of recently introgressed and background genetic variants
Cited by: 13
Author(s): Mitra Menon, Justin C. Bagley, Gerald Page, Amy V. Whipple, Anna W. Schoettle, Christopher J. Still, Christian Wehenkel, Kristen M. Waring, Lluvia Flores‐Rentería, Samuel A. Cushman, Andrew J. Eckert
Software Mentions: 3
Published: almost 4 years ago
10.1007/s10764-018-0056-4
Reduced Introgression of Sex Chromosome Markers in the Mexican Howler Monkey (Alouatta palliata × A. pigra) Hybrid Zone
Cited by: 20
Author(s): Liliana Cortés‐Ortiz, Marcella D. Nidiffer, Javier Hermida-Lagunes, Francisco García-Orduña, Ariadna Rangel‐Negrín, Dawn M. Kitchen, Thore J. Bergman, Pedro Américo D. Dias, Domingo Canales‐Espinosa
Software Mentions: 2
Published: about 6 years ago
10.7717/peerj.10579
Depicting the mating system and patterns of contemporary pollen flow in trees of the genus Anadenanthera (Fabaceae)
Cited by: 3
Author(s): Juliana Massimino Feres, Alison G. Nazareno, Leonardo Maurici Borges, Marcela Corbo Guidugli, Fernando Bonifácio-Anacleto, Ana Lília Alzate-Marin
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pntd.0009777
Characterization of the β-tubulin gene family in Ascaris lumbricoides and Ascaris suum and its implication for the molecular detection of benzimidazole resistance
Cited by: 10
Author(s): Sara Roose, Russell W. Avramenko, Stephen M. J. Pollo, James D. Wasmuth, Shaali Ame, Mio Ayana, Martha Betson, Piet Cools, Daniel Dana, Ben P. Jones, Zeleke Mekonnen, Arianna Morosetti, Abhinaya Venkatesan, Johnny Vlaminck, Matthew L. Workentine, Bruno Levecke, John S. Gilleard, Peter Geldhof
Software Mentions: 2
Published: about 3 years ago
10.1038/s41598-020-76248-2
Ecological drivers of genetic connectivity for African malaria vectors Anopheles gambiae and An. arabiensis
Cited by: 9
Author(s): Elizabeth Hemming-Schroeder, Daibin Zhong, Maxwell G. Machani, Hoan Nguyen, Sarah Thong, Samuel C. Kahindi, Charles Mbogo, Harrysone Atieli, Andrew K. Githeko, Tovi Lehmann, James W. Kazura, Guiyun Yan
Software Mentions: 2
Published: about 4 years ago
10.1002/ece3.7480
Intact landscape promotes gene flow and low genetic structuring in the threatened Eastern Massasauga Rattlesnake
Cited by: 2
Author(s): Nathan Kudla, Eric M. McCluskey, Vijay Lulla, Ralph Grundel, Jennifer A. Moore
Software Mentions: 1
Published: over 3 years ago
10.1098/rsos.190050
Assortative mating frames establishment in a young island bird population
Cited by: 3
Author(s): Jan O. Engler, Thomas Sacher, Timothy Coppack, Franz Bairlein
Software Mentions: 1
Published: over 5 years ago
10.1002/aps3.1178
Development of 10 single‐copy nuclear<scp>DNA</scp>markers for<i>Euchresta horsfieldii</i>(Fabaceae), a rare medicinal plant
Cited by: 3
Author(s): Arief Priyadi, Chao Feng, Ming Kang, Hongwen Huang
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-020-77132-9
Genetic monogamy and mate choice in a pair-living primate
Cited by: 11
Author(s): Sofya Dolotovskaya, Christian Roos, Eckhard W. Heymann
Software Mentions: 1
Published: about 4 years ago
10.1093/g3journal/jkab087
Genetic diversity, population structure, and selection signature in Ethiopian sorghum [<i>Sorghum bicolor</i> L. (Moench)] germplasm
Cited by: 11
Author(s): Zeleke Wondimu, Hongxu Dong, Andrew H. Paterson, Walelign Worku, Kassahun Bantte
Software Mentions: 1
Published: over 3 years ago