Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: PHENIX
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/PHENIX
Phenotypic Integration Index
7 versions
Latest release: over 7 years ago
1 dependent package
161 downloads last month
Papers Mentioning PHENIX 2,287
10.7554/eLife.53910
Structure of the human BBSome core complexCited by: 53
Author(s): B.U. Klink, Christos Gatsogiannis, Oliver Hofnagel, Alfred Wittinghofer, Stefan Raunser
Software Mentions: 1
Published: almost 5 years ago
10.7554/eLife.36349
The universally-conserved transcription factor RfaH is recruited to a hairpin structure of the non-template DNA strandCited by: 40
Author(s): Philipp K Zuber, Irina Artsimovitch, Monali NandyMazumdar, Zhaokun Liu, Yuri A. Nedialkov, Kristian Schweimer, Paul Rösch, Stefan H. Knauer
Software Mentions: 1
Published: over 6 years ago
10.7554/eLife.07888
STIL binding to Polo-box 3 of PLK4 regulates centriole duplicationCited by: 106
Author(s): Christian Arquint, Anna-Maria Gabryjonczyk, Stefan Imseng, Raphael Böhm, Evelyn Sauer, Sebastian Hiller, Erich A. Nigg, Timm Maier
Software Mentions: 1
Published: over 9 years ago
10.7554/eLife.22567
Mechanistic insights into neurotransmitter release and presynaptic plasticity from the crystal structure of Munc13-1 C1C2BMUNCited by: 98
Author(s): Junjie Xu, Marcial Camacho, Yibin Xu, Vicotoria Esser, Xiaoxia Liu, Thorsten Trimbuch, Yun-Zu Pan, Cong Ma, Diana R. Tomchick, Christian Rosenmund, Josep Rizo
Software Mentions: 1
Published: almost 8 years ago
10.7554/eLife.57491
Molecular basis for N-terminal alpha-synuclein acetylation by human NatBCited by: 20
Author(s): Sunbin Deng, Buyan Pan, Leah Gottlieb, E. James Petersson, Ronen Marmorstein
Software Mentions: 1
Published: about 4 years ago
10.7554/eLife.20621
Malaria parasite CelTOS targets the inner leaflet of cell membranes for pore-dependent disruptionCited by: 46
Author(s): John R. Jimah, Nichole D. Salinas, Monica Sala-Rabanal, Nathaniel G. Jones, L. David Sibley, Colin G. Nichols, Paul H. Schlesinger, Niraj H. Tolia
Software Mentions: 1
Published: almost 8 years ago
10.7554/eLife.37291
Kinetic mechanism of coupled binding in sodium-aspartate symporter GltPhCited by: 33
Author(s): SeCheol Oh, Olga Boudker
Software Mentions: 1
Published: about 6 years ago
10.7554/eLife.57096
Structural insights into human acid-sensing ion channel 1a inhibition by snake toxin mambalgin1Cited by: 25
Author(s): Degang Sun, Sanling Liu, Siyu Li, Mengge Zhang, Fan Yang, Ming Wen, Peng Shi, Tao Wang, Man Pan, Shenghai Chang, Xing Zhang, Longhua Zhang, Changlin Tian, Lei Liu
Software Mentions: 1
Published: about 4 years ago
10.7554/eLife.52343
Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitchCited by: 47
Author(s): Jonathan M. Philpott, Rajesh Narasimamurthy, Clarisse Gravina Ricci, Alfred M. Freeberg, Sabrina R. Hunt, Lauren E. Yee, Rebecca S. Pelofsky, Sarvind Tripathi, David M. Virshup, Carrie L. Partch
Software Mentions: 1
Published: almost 5 years ago
10.7554/eLife.16309
Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5αCited by: 77
Author(s): Jonathan M. Wagner, Marcin D. Roganowicz, Katarzyna Skorupka, Steven L. Alam, Devin E. Christensen, Ginna Doss, Yuqing Wan, Gabriel A. Frank, Barbie K. Ganser‐Pornillos, Wesley I. Sundquist, Owen Pornillos
Software Mentions: 1
Published: over 8 years ago
10.7554/eLife.25541
Epistatic mutations in PUMA BH3 drive an alternate binding mode to potently and selectively inhibit anti-apoptotic Bfl-1Cited by: 30
Author(s): J.M. Jenson, Jeremy Ryan, Robert A. Grant, Anthony Letaï, Amy E. Keating
Software Mentions: 1
Published: over 7 years ago
10.7554/eLife.38922
Structural basis of tubulin recruitment and assembly by microtubule polymerases with tumor overexpressed gene (TOG) domain arraysCited by: 31
Author(s): Stanley Nithianantham, B. Cook, Madeleine Beans, Fei Guo, Fred Chang, Jawdat Al-Bassam
Software Mentions: 1
Published: about 6 years ago
10.1128/mBio.03199-20
Two Distinct Conformations in 34 FliF Subunits Generate Three Different Symmetries within the Flagellar MS-RingCited by: 19
Author(s): Norihiro Takekawa, Akihiro Kawamoto, Mayuko Sakuma, Takayuki Kato, Seiji Kojima, Miki Kinoshita, Tetsuo Minamino, Keiichi Namba, Michio Homma, Katsumi Imada
Software Mentions: 1
Published: over 3 years ago
10.1038/cr.2017.148
Structural basis for specific flagellin recognition by the NLR protein NAIP5Cited by: 52
Author(s): Xuanming Yang, Fan Yang, Weiguang Wang, Ge Lin, Zhongzhi Hu, Zhifu Han, Yijun Qi, Liman Zhang, Jiawei Wang, Sen-Fang Sui, Jijie Chai
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41422-019-0237-5
Mammalian ALKBH1 serves as an N6-mA demethylase of unpairing DNACited by: 62
Author(s): Min Zhang, Sen Yang, Raman Nelakanti, Wentao Zhao, Gaochao Liu, Zheng Li, Xiaohui Liu, Tao Wu, Andrew Xiao, Haitao Li
Software Mentions: 1
Published: almost 5 years ago
10.1038/s41422-018-0091-x
Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockadeCited by: 79
Author(s): Yiwei Wang, Yuxuan Jiang, Shan Ding, Jiawang Li, Nguyễn Hải Sông, Yujing Ren, Danning Hong, Wu Cai, Bin Li, Feng Wang, Wei He, Jiawei Wang, Ziqing Mei
Software Mentions: 1
Published: about 6 years ago
10.1038/s41422-018-0131-6
Structural insights into a high fidelity variant of SpCas9Cited by: 36
Author(s): Muchun Guo, Kewei Ren, Yuwei Zhu, Zhonglin Tang, Yuhang Wang, Bailing Zhang, Zhiwei Huang
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41422-020-00404-6
Structural mechanism of phospholipids translocation by MlaFEDB complexCited by: 46
Author(s): Ximin Chi, Qiongxuan Fan, Yuanyuan Zhang, Ke Liang, Li Wan, Qiang Zhou, Yanyan Li
Software Mentions: 1
Published: about 4 years ago
10.1038/s41422-020-0305-x
Inhibition of SARS-CoV-2 (previously 2019-nCoV) infection by a highly potent pan-coronavirus fusion inhibitor targeting its spike protein that harbors a high capacity to mediate membrane fusionCited by: 1,035
Author(s): Shuai Xia, Meiqin Liu, Chao Wang, Wei Xu, Qiaoshuai Lan, Siliang Feng, Feifei Qi, Linlin Bao, Lanying Du, Shuwen Liu, Chuan Qin, Fei Sun, Shi Z, Yun Zhu, Shibo Jiang, Lu Lu
Software Mentions: 1
Published: over 4 years ago
10.1038/s41422-020-0280-2
Cryo-EM structures of PAC1 receptor reveal ligand binding mechanismCited by: 31
Author(s): Jia Wang, Xianqiang Song, Dandan Zhang, Xiaoqing Chen, Xun Li, Yaping Sun, Li Cui, Yunzhi Song, Yao Ding, Ruobing Ren, Essa Hu Harrington, Liaoyuan A. Hu, Wenge Zhong, Cen Xu, Xin Huang, Hongwei Wang, Yingli Ma
Software Mentions: 1
Published: almost 5 years ago
10.1038/cr.2017.83
Dimeric structure of the uracil:proton symporter UraA provides mechanistic insights into the SLC4/23/26 transportersCited by: 82
Author(s): Xuelian Yu, Guanghui Yang, Chuangye Yan, Javier L. Baylon, Jing Jiang, Fuchu He, Gongxun Lu, Kazuya Hasegawa, Hideo Okumura, Tingliang Wang, Emad Tajkhorshid, Shuo Li, Nieng Yan
Software Mentions: 1
Published: over 7 years ago
10.1016/j.tcsw.2018.06.002
The role of the jaw subdomain of peptidoglycan glycosyltransferases for lipid II polymerizationCited by: 6
Author(s): Avinash S. Punekar, Firdaus Samsudin, Adrian J. Lloyd, Christopher G. Dowson, David J. Scott, Syma Khalid, David I. Roper
Software Mentions: 1
Published: over 6 years ago
10.1080/19336950.2018.1457898
X-ray crystallography of TRP channelsCited by: 5
Author(s): Appu Kumar Singh, L.L. McGoldrick, Kei Saotome, Alexander I. Sobolevsky
Software Mentions: 1
Published: almost 7 years ago
10.1002/cmdc.201500014
Selective Targeting of the TPX2 Site of Importin-α Using Fragment-Based Ligand DesignCited by: 11
Author(s): Rhian S. Holvey, Eugene Valkov, David Neal, Murray Stewart, Chris Abell
Software Mentions: 1
Published: over 9 years ago
10.1016/j.chembiol.2015.10.015
Unraveling the B. pseudomallei Heptokinase WcbL: From Structure to Drug DiscoveryCited by: 7
Author(s): Mirella Vivoli, Michail N. Isupov, Rebecca Nicholas, Andrew M. Hill, Andrew E. Scott, Paul Kosma, Joann L. Prior, Nicholas J. Harmer
Software Mentions: 1
Published: almost 9 years ago
10.1016/j.chembiol.2014.03.009
Synthetic Inositol Phosphate Analogs Reveal that PPIP5K2 Has a Surface-Mounted Substrate Capture Site that Is a Target for Drug DiscoveryCited by: 45
Author(s): Huanchen Wang, H. Yasmin Godage, Andrew M. Riley, Jeremy D. Weaver, Stephen B. Shears, Barry V. L. Potter
Software Mentions: 1
Published: over 10 years ago
10.1186/s13065-017-0296-y
Ultra-high resolution X-ray structures of two forms of human recombinant insulin at 100 KCited by: 8
Author(s): David R. Lisgarten, Rex A. Palmer, C.M.C. Lobley, C.E. Naylor, Babur Z. Chowdhry, Zakieh I. Al-Kurdi, Adnan A. Badwan, Brendan J. Howlin, Nicholas C. J. Gibbons, José W. Saldanha, J. N. Lisgarten, A.K. Basak
Software Mentions: 1
Published: over 7 years ago
10.1039/d0sc01935f
Enhancing a <i>de novo</i> enzyme activity by computationally-focused ultra-low-throughput screeningCited by: 22
Author(s): Valeria A. Risso, Adrian Romero‐Rivera, Luis I. Gutierrez-Rus, Mariano Ortega‐Muñoz, Francisco Santoyo‐González, José A. Gavira, José M. Sanchez-Ruiz, Shina Caroline Lynn Kamerlin
Software Mentions: 1
Published: almost 5 years ago
10.1039/c8sc03759k
Structural insights reveal a recognition feature for tailoring hydrocarbon stapled-peptides against the eukaryotic translation initiation factor 4E proteinCited by: 18
Author(s): Dilraj Lama, Anne‐Marie Liberatore, Yuri Frosi, Jessica Nakhlé, Natia Tsomaia, Tarig Bashir, David P. Lane, Christopher J. Brown, Chandra Verma, Serge Auvin
Software Mentions: 1
Published: almost 6 years ago
10.1039/c6sc01019a
Elucidation of the heme active site electronic structure affecting the unprecedented nitrite dismutase activity of the ferriheme b proteins, the nitrophorinsCited by: 9
Author(s): Chunmao He, Hideaki Ogata, Wolfgang Lubitz
Software Mentions: 1
Published: almost 9 years ago
10.1039/c5sc03397g
A structural view of synthetic cofactor integration into [FeFe]-hydrogenasesCited by: 115
Author(s): Julian Esselborn, Norifumi Muraki, Kathrin Klein, Vera Engelbrecht, Nils Metzler‐Nolte, Ulf‐Peter Apfel, Eckhard Hofmann, Genji Kurisu, Thomas Happe
Software Mentions: 1
Published: almost 9 years ago
10.1039/c6sc05504d
Quantum crystallographyCited by: 106
Author(s): Simon Grabowsky, Alessandro Genoni, Hans‐Beat Bürgi
Software Mentions: 1
Published: almost 8 years ago
10.1039/c8sc01074a
A functional interplay between intein and extein sequences in protein splicing compensates for the essential block B histidineCited by: 24
Author(s): Kristina Friedel, Monika A. Popp, Julian C. J. Matern, E.M. Gazdag, Ilka V. Thiel, Gerrit Volkmann, Wulf Blankenfeldt, Henning D. Mootz
Software Mentions: 1
Published: almost 6 years ago
10.1039/c8sc04564j
Predicting protein–ligand binding affinity and correcting crystal structures with quantum mechanical calculations: lactate dehydrogenase ACited by: 10
Author(s): Iva Lukac, Hend E. Abdelhakim, Richard A. Ward, Stephen A. St-Gallay, Judith C. Madden, Andrew G. Leach
Software Mentions: 1
Published: almost 6 years ago
10.1002/cbic.201402597
Hen Egg‐White Lysozyme Crystallisation: Protein Stacking and Structure Stability Enhanced by a Tellurium(VI)‐Centred PolyoxotungstateCited by: 67
Author(s): Aleksandar Bijelic, Christian Molitor, S.G. Mauracher, Rami Al‐Oweini, Ulrich Kortz, Annette Rompel
Software Mentions: 1
Published: almost 10 years ago
10.1038/s42003-020-01221-8
Structural basis of redox modulation on chloroplast ATP synthaseCited by: 22
Author(s): Jay How Yang, Dewight Williams, Eaazhisai Kandiah, Petra Fromme, Po-Lin Chiu
Software Mentions: 1
Published: about 4 years ago
10.1038/s42003-019-0721-y
Insights into the κ/ι-carrageenan metabolism pathway of some marine Pseudoalteromonas speciesCited by: 38
Author(s): A.G. Hettle, Joanne K. Hobbs, B. Pluvinage, Chelsea Vickers, Kento T. Abe, Orly Salama-Alber, Bailey E. McGuire, Jan‐Hendrik Hehemann, Joseph P. M. Hui, Fabrice Berrué, Arjun H. Banskota, Junzeng Zhang, Eric Bottos, Jonathan D. Van Hamme, A.B. Boraston
Software Mentions: 1
Published: almost 5 years ago
10.1038/s42003-020-01179-7
The oligomeric assembly of galectin-11 is critical for anti-parasitic activity in sheep (Ovis aries)Cited by: 4
Author(s): Dhanasekaran Sakthivel, Sarah Preston, Robin B. Gasser, Tatiana P. Soares da Costa, Julia N. Hernández, Adam Shahine, MD Shakif-Azam, Peter Lock, Jamie Rossjohn, Matthew A. Perugini, J. González, Elza Nicole Theresia Meeusen, David Piedrafita, Travis Beddoe
Software Mentions: 1
Published: over 4 years ago
10.1038/s42003-021-02362-0
Structural plasticity of mumps virus nucleocapsids with cryo-EM structuresCited by: 9
Author(s): Saw-See Hong, Xin Su, Tianhao Li, Yuqi Qin, Na Zhang, Liuyan Yang, Lie Ma, Yun Bai, Lei Qi, Yunhui Liu, Qing-Tao Shen
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-021-02250-7
Structural basis of coronavirus E protein interactions with human PALS1 PDZ domainCited by: 34
Author(s): Airah Javorsky, Patrick O. Humbert, Marc Kvansakul
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-021-01830-x
Insights on autophagosome–lysosome tethering from structural and biochemical characterization of human autophagy factor EPG5Cited by: 9
Author(s): Sung Eun Nam, Yiu Wing Sunny Cheung, Thanh Ngoc Nguyen, Michael C. Gong, Sherilynn F. Chan, Michael Lazarou, Calvin K. Yip
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-019-0482-7
Crystal structure of human endothelin ETB receptor in complex with peptide inverse agonist IRL2500Cited by: 27
Author(s): Chisae Nagiri, Wataru Shihoya, Asuka Inoue, Francois Marie Ngako Kadji, Junken Aoki, Osamu Nureki
Software Mentions: 1
Published: over 5 years ago
10.1038/s42003-020-01211-w
Allosteric regulation of lysosomal enzyme recognition by the cation-independent mannose 6-phosphate receptorCited by: 17
Author(s): Linda J. Olson, Sandeep K. Misra, Mayumi Ishihara, Kevin P. Battaile, Oliver C. Grant, Amika Sood, Robert J. Woods, Jung‐Ja P. Kim, Michael Tiemeyer, Gang Ren, Joshua S. Sharp, Nancy M. Dahms
Software Mentions: 1
Published: about 4 years ago
10.1038/s42003-019-0642-9
Identification of a monoclonal antibody that targets PD-1 in a manner requiring PD-1 Asn58 glycosylationCited by: 33
Author(s): Mingzhu Wang, Junchao Wang, Rongjuan Wang, Shasha Jiao, Shuang Wang, Jinchao Zhang, Min Zhang
Software Mentions: 1
Published: about 5 years ago
10.1038/s42003-020-0951-z
Cryo-EM structure of the volume-regulated anion channel LRRC8D isoform identifies features important for substrate permeationCited by: 33
Author(s): Ryoki Nakamura, Tomohiro Numata, Go Kasuya, Takeshi Yokoyama, Takashi Nishizawa, Tsukasa Kusakizako, Tosio Kato, Tatsuya Hagino, Naoshi Dohmae, Miyako Inoue, K. Watanabe, Hidenori Ichijo, Masahide Kikkawa, Mikako Shirouzu, Thomas J. Jentsch, Ryuichiro Ishitani, Yasunobu Okada, Osamu Nureki
Software Mentions: 1
Published: over 4 years ago
10.1038/s42003-021-01815-w
Entropy-driven binding of gut bacterial β-glucuronidase inhibitors ameliorates irinotecan-induced toxicityCited by: 13
Author(s): Hong-Shiang Lin, Chia-Yu Chen, Ting-Chien Lin, Lun-Fu Yeh, Wei‐Che Hsieh, Shijay Gao, Pierre-Alain Burnouf, Bing‐Mae Chen, T.J. Hsieh, P. Dashnyam, Yen-Hsi Kuo, Zhijay Tu, Steve R. Roffler, Chun‐Hung Lin
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-020-01286-5
Caffeine inhibits Notum activity by binding at the catalytic pocketCited by: 10
Author(s): Yuguang Zhao, Jingshan Ren, James Hillier, Wenjing Lu, E.Y. Jones
Software Mentions: 1
Published: about 4 years ago
10.1038/s42003-019-0365-y
Arsinothricin, an arsenic-containing non-proteinogenic amino acid analog of glutamate, is a broad-spectrum antibioticCited by: 28
Author(s): Venkadesh Sarkarai Nadar, Jian Chen, Dharmendra S. Dheeman, Adriana E Galván, Kunie Yoshinaga-Sakurai, P. Kandavelu, Banumathi Sankaran, Masato Kuramata, Shinya Ishikawa, Barry P. Rosen, Masafumi Yoshinaga
Software Mentions: 1
Published: over 5 years ago
10.1038/s42003-021-02122-0
Mechanosensitive channel YnaI has lipid-bound extended sensor paddlesCited by: 5
Author(s): Wenxin Hu, Zhiming Wang, Hongjin Zheng
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-018-0121-8
Structural basis for promotion of duodenal iron absorption by enteric ferric reductase with ascorbateCited by: 25
Author(s): Menega Ganasen, Hiromi Togashi, Hanae Takeda, Hiroyuki Asakura, Takehiko Tosha, Keitaro Yamashita, Kunio Hirata, Yoshiki Nariai, Takeshi Urano, Xian‐You Yuan, Iqbal Hamza, A. Grant Mauk, Yoshitsugu Shiro, Hiroshi Sugimoto, Hitomi Sawai
Software Mentions: 1
Published: over 6 years ago
10.1038/s42003-019-0631-z
Structural characterization of HypX responsible for CO biosynthesis in the maturation of NiFe-hydrogenaseCited by: 12
Author(s): Norifumi Muraki, Kentaro Ishii, Susumu Uchiyama, Satoru Itoh, Hisashi Okumura, Shigetoshi Aono
Software Mentions: 1
Published: about 5 years ago
10.1038/s42003-021-01906-8
Structure analysis suggests Ess1 isomerizes the carboxy-terminal domain of RNA polymerase II via a bivalent anchoring mechanismCited by: 7
Author(s): Kevin E.W. Namitz, Tongyin Zheng, Ashley J. Canning, Nilda L. Alicea-Velázquez, Carlos Castañeda, Michael S. Cosgrove, Steven D. Hanes
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-020-01621-w
Porphyromonas gingivalis fimbrial protein Mfa5 contains a von Willebrand factor domain and an intramolecular isopeptideCited by: 10
Author(s): T.V. Heidler, Karin Ernits, Agnieszka Ziółkowska, Rolf Claesson, Karina Persson
Software Mentions: 1
Published: almost 4 years ago
10.1038/s42003-021-01735-9
Tipiracil binds to uridine site and inhibits Nsp15 endoribonuclease NendoU from SARS-CoV-2Cited by: 75
Author(s): Young Chang Kim, Jacek Wower, N. Maltseva, Changsoo Chang, R. Jedrzejczak, Mateusz Wilamowski, Soowon Kang, Vlad Nicolaescu, Glenn Randall, K. Michalska, A. Joachimiak
Software Mentions: 1
Published: almost 4 years ago
10.1038/s42003-021-02134-w
Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virusCited by: 2
Author(s): Roger Castells‐Graells, Jonas R S Ribeiro, Tatiana Domitrovic, Emma L. Hesketh, Charlotte A. Scarff, John E. Johnson, Neil A. Ranson, David M. Lawson, George P. Lomonossoff
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-021-02088-z
Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2Cited by: 8
Author(s): Isaac Fianu, Christian Dienemann, Shintaro Aibara, S. Schilbach, Patrick Cramer
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-021-02147-5
Crystal structures of aconitase X enzymes from bacteria and archaea provide insights into the molecular evolution of the aconitase superfamilyCited by: 6
Author(s): Shizuo Watanabe, Yohsuke Murase, Yasunori Watanabe, Yasuhisa Sakurai, Kunihiko Tajima
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-020-0997-y
Steric occlusion regulates proximal interactions of acyl carrier protein domain in fungal fatty acid synthaseCited by: 5
Author(s): Jennifer W. Lou, Mohammad T. Mazhab-Jafari
Software Mentions: 1
Published: over 4 years ago
10.1038/s42003-020-01358-6
Polymerase delta-interacting protein 38 (PDIP38) modulates the stability and activity of the mitochondrial AAA+ protease CLPXPCited by: 7
Author(s): Philip R. Strack, Erica J. Brodie, Hanmiao Zhan, Verena J. Schuenemann, Liz J. Valente, Tamanna Saiyed, Bradley R. Lowth, Lauren M. Angley, Matthew A. Perugini, Kornelius Zeth, Kaye N. Truscott, David A. Dougan
Software Mentions: 1
Published: about 4 years ago
10.1038/s42003-020-0780-0
Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiationCited by: 24
Author(s): Pierre‐Damien Coureux, Christine Lazennec‐Schurdevin, Sophie Bourcier, Yves Mechulam, Emmanuelle Schmitt
Software Mentions: 1
Published: almost 5 years ago
10.1038/s42003-021-01707-z
Histone variant H2A.B-H2B dimers are spontaneously exchanged with canonical H2A-H2B in the nucleosomeCited by: 16
Author(s): Rina Hirano, Yasuhiro Arimura, Tomoya Kujirai, Mikihiro Shibata, Aya Okuda, Ken Morishima, Rintaro Inoue, Masaaki Sugiyama, Hitoshi Kurumizaka
Software Mentions: 1
Published: almost 4 years ago
10.1038/s42003-021-02050-z
SWI/SNF subunit BAF155 N-terminus structure informs the impact of cancer-associated mutations and reveals a potential drug binding siteCited by: 4
Author(s): Mark D. Allen, Stefan Freund, Mark Bycroft, Giovanna Zinzalla
Software Mentions: 1
Published: over 3 years ago
10.1038/s42003-020-01121-x
Molecular mechanism of mitochondrial phosphatidate transfer by Ups1Cited by: 4
Author(s): Jiuwei Lu, Chun Chan, Leiye Yu, Jun Fan, Fei Sun, Yujia Zhai
Software Mentions: 1
Published: over 4 years ago
10.1038/s42003-020-1030-1
Aldehyde-alcohol dehydrogenase undergoes structural transition to form extended spirosomes for substrate channelingCited by: 10
Author(s): Gijeong Kim, Jinsol Yang, Juwon Jang, Ji Yong Choi, Andrew J. Roe, Olwyn Byron, Chaok Seok, Ji-Joon Song
Software Mentions: 1
Published: over 4 years ago
10.1038/s42003-021-02156-4
Cryo-EM structure of type 1 IP3R channel in a lipid bilayerCited by: 45
Author(s): Mariah R. Baker, Guizhen Fan, Alexander Seryshev, Melina A. Agosto, Matthew L. Baker, Irina I. Serysheva
Software Mentions: 1
Published: over 3 years ago
10.1016/j.csbj.2021.01.031
Binding of non-canonical peptidoglycan controls Vibrio cholerae broad spectrum racemase activityCited by: 3
Author(s): Akbar Espaillat, César Carrasco-López, N. Bernardo-García, A. Rojas-Altuve, Javier Klett, Antonio Morreale, J.A. Hermoso, Felipe Cava
Software Mentions: 1
Published: almost 4 years ago
10.1016/j.csbj.2020.03.004
Structure, dynamics and immunogenicity of a catalytically inactive CXC chemokine-degrading protease SpyCEP from Streptococcus pyogenesCited by: 16
Author(s): Sophie McKenna, E. Malito, Sarah L. Rouse, Francesca Abate, Giuliano Bensi, Emiliano Chiarot, Francesca Micoli, Francesca Mancini, Danilo Gomes Moriel, Guido Grandi, Danuta E. Mossakowska, Max Pearson, Yingqi Xu, James E. Pease, Shiranee Sriskandan, Immaculada Margarit, Matthew J. Bottomley, Stephen Matthews
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.crstbi.2020.11.001
Crystal structure of the atypically adhesive SpaB basal pilus subunit: Mechanistic insights about its incorporation in lactobacillar SpaCBA piliCited by: 7
Author(s): Abhin Kumar Megta, Shivendra Pratap, Abhiruchi Kant, Airi Palva, Ingemar von Ossowski, Vengadesan Krishnan
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.dnarep.2015.10.002
Versatility in phospho-dependent molecular recognition of the XRCC1 and XRCC4 DNA-damage scaffolds by aprataxin-family FHA domainsCited by: 25
Author(s): Amy L. Cherry, Timothy J. Nott, Geoffrey Kelly, Stuart L. Rulten, Keith W. Caldecott, Stephen J. Smerdon
Software Mentions: 1
Published: about 9 years ago
10.1016/j.dib.2016.03.082
Structural dataset for the PPARγ V290M mutantCited by: 1
Author(s): Ana C. Puhl, Paul Webb, Igor Polikarpov
Software Mentions: 1
Published: over 8 years ago
10.1016/j.dib.2017.09.044
Structural and biochemical data of Trichoderma harzianum GH1 β-glucosidasesCited by: 3
Author(s): R.N. Florindo, Valquiria P. Souza, Hêmily Sanches Mutti, Lívia R. Manzine Margarido, César M. Camilo, Sandro R. Marana, Igor Polikarpov, Alessandro S. Nascimento
Software Mentions: 1
Published: almost 7 years ago
10.1016/j.dib.2015.12.007
Expression, purification, crystallization and X-ray data collection for RAS and its mutantsCited by: 15
Author(s): Christian W. Johnson, G. Buhrman, Pamela Y. Ting, John Colicelli, Carla Mattos
Software Mentions: 1
Published: over 8 years ago
10.1016/j.devcel.2018.05.032
CLASP Suppresses Microtubule Catastrophes through a Single TOG DomainCited by: 88
Author(s): Amol Aher, Maurits Kok, Ashwani Sharma, Ankit Rai, Natacha Olieric, Ruddi Rodríguez-García, Eugene A. Katrukha, T. Weinert, V. Oliéric, Lukas C. Kapitein, Michel O. Steinmetz, Marileen Dogterom, Anna Akhmanova
Software Mentions: 1
Published: over 6 years ago
10.15252/embj.201797876
An invisible ubiquitin conformation is required for efficient phosphorylation by <scp>PINK</scp> 1Cited by: 50
Author(s): Christina Gladkova, Alexander F Schubert, Jane L. Wagstaff, Jonathan N. Pruneda, Stefan Freund, David Komander
Software Mentions: 1
Published: about 7 years ago
10.15252/embj.2021107807
Nse5/6 inhibits the Smc5/6 ATPase and modulates DNA substrate bindingCited by: 21
Author(s): Michael Täschner, J. Basquin, Barbara Steigenberger, Ingmar B. Schäfer, Young‐Min Soh, Claire Basquin, Esben Lorentzen, Markus Räschle, Richard A. Scheltema, Stephan Gruber
Software Mentions: 1
Published: over 3 years ago
10.15252/embj.2018100772
Nucleotide signaling pathway convergence in a cAMP‐sensing bacterial c‐di‐GMP phosphodiesteraseCited by: 10
Author(s): Ian T. Cadby, Sarah M. Basford, Ruth Nottingham, Richard W. Meek, Rebecca Lowry, Carey Lambert, Matthew Tridgett, Rob Till, Rashidah Ahmad, Rowena Fung, Laura Hobley, William S. Hughes, Patrick J. Moynihan, R. Elizabeth Sockett, Andrew L. Lovering
Software Mentions: 1
Published: over 5 years ago
10.15252/embj.201798875
Mechanism of <scp>APTX</scp> nicked <scp>DNA</scp> sensing and pleiotropic inactivation in neurodegenerative diseaseCited by: 11
Author(s): Percy Tumbale, M.J. Schellenberg, Geoffrey A. Mueller, Emma Fairweather, Mandy Watson, Jessica Neville Little, J.M. Krahn, Ian D. Waddell, Robert E. London, R. Scott Williams
Software Mentions: 1
Published: over 6 years ago
10.15252/embr.201541520
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Author(s): Lakxmi Subramanian, Bethan Medina‐Pritchard, Rachael Barton, Frances Spiller, Raghavendran Kulasegaran‐Shylini, Guoda Radaviciute, Robin C. Allshire, A. Arockia Jeyaprakash
Software Mentions: 1
Published: over 8 years ago
10.15252/embr.201338403
Structural basis for polyspecificity in the <scp>POT</scp> family of proton‐coupled oligopeptide transportersCited by: 93
Author(s): Joseph A. Lyons, Joanne L. Parker, Nicolae Solcan, Alette Brinth, Dianfan Li, Syed Tasadaque Ali Shah, Martin Caffrey, Simon Newstead
Software Mentions: 1
Published: over 10 years ago
10.15252/embr.201743967
Control of box C/D snoRNP assembly by N <sup>6</sup> ‐methylation of adenineCited by: 39
Author(s): Lin Huang, Saira Ashraf, Jia Wang, David M.J. Lilley
Software Mentions: 1
Published: over 7 years ago
10.15252/embr.201643374
Molecular architecture of the N‐type <scp>ATP</scp>ase rotor ring from <i>Burkholderia pseudomallei</i>Cited by: 36
Author(s): Sarah Schulz, Martin Wilkes, Deryck J. Mills, Werner Kühlbrandt, Thomas Meier
Software Mentions: 1
Published: over 7 years ago
10.15252/embr.202052242
Molecular mechanism of Mad1 kinetochore targeting by phosphorylated Bub1Cited by: 23
Author(s): Elyse S. Fischer, Chunxue Yu, Dom Bellini, Stephen H. McLaughlin, Christian M. Orr, Armin Wagner, Stefan Freund, David Barford
Software Mentions: 1
Published: over 3 years ago
10.15252/embr.202051015
Respiratory supercomplexes enhance electron transport by decreasing cytochrome <i>c</i> diffusion distanceCited by: 61
Author(s): Jens Berndtsson, Andreas Aufschnaiter, Sorbhi Rathore, Lorena Marín-Buera, Hannah Dawitz, Jutta Diessl, Verena Kohler, Antoni Barrientos, Sabrina Büttner, Flavia Fontanesi, Martin Ott
Software Mentions: 1
Published: about 4 years ago
10.1038/emi.2017.96
Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replicationCited by: 9
Author(s): Meng-Jung Chiang, F.N. Musayev, Martina Košíková, Zhengshi Lin, Yamei Gao, Philip D. Mosier, Bashayer Althufairi, Zhiping Ye, Qibing Zhou, Umesh R. Desai, Hang Xie, Martin K. Safo
Software Mentions: 1
Published: almost 8 years ago
10.1080/22221751.2021.1937329
Structure-based design and characterization of novel fusion-inhibitory lipopeptides against SARS-CoV-2 and emerging variantsCited by: 14
Author(s): Danwei Yu, Yuanmei Zhu, Tao Jiao, Tong Tong Wu, Xia Xiao, Bo Qin, Huihui Chong, Xiaobo Lei, Lili Ren, Sheng Cui, Jianwei Wang, Yuxian He
Software Mentions: 1
Published: almost 4 years ago
10.1080/22221751.2019.1625727
Cisplatin protects mice from challenge of <i>Cryptococcus neoformans</i> by targeting the Prp8 inteinCited by: 18
Author(s): Zhong Li, Bin Fu, Cathleen M. Green, Binbin Liu, Jing Zhang, Yuekun Lang, Sudha Chaturvedi, Marlene Belfort, Guojian Liao, Hongmin Li
Software Mentions: 1
Published: almost 6 years ago
10.1289/ehp.1003328
Peroxisome Proliferator-Activated Receptor γ Is a Target for Halogenated Analogs of Bisphenol ACited by: 251
Author(s): Anne Riu, Marina Grimaldi, Albane le Maire, Gilbert Bey, Kevin J. Phillips, Abdelhay Boulahtouf, Elisabeth Perdu, Daniel Zalko, William Bourguet, Patrick Balaguer
Software Mentions: 1
Published: about 13 years ago
10.1007/s00249-019-01411-1
Binding of HasA by its transmembrane receptor HasR follows a conformational funnel mechanismCited by: 4
Author(s): Thomas E. Exner, Stefanie Becker, Simon Becker, Audrey Boniface-Guiraud, Philippe Delepelaire, Kay Diederichs, Wolfram Welte
Software Mentions: 1
Published: almost 5 years ago
10.1016/j.ejmech.2016.08.047
Design of nucleotide-mimetic and non-nucleotide inhibitors of the translation initiation factor eIF4E: Synthesis, structural and functional characterisationCited by: 21
Author(s): Fadi Soukarieh, Matthew W. Nowicki, Amandine Bastide, Tuija Pöyry, Carolyn Jones, Kate Dudek, Geetanjali Patwardhan, François Meullenet, Neil J. Oldham, Malcolm D. Walkinshaw, Anne E. Willis, Peter M. Fischer
Software Mentions: 1
Published: about 8 years ago
10.1140/epjc/s10052-017-4779-8
Measurement of azimuthal correlations of D mesons with charged particles in pp collisions at $$\sqrt{s}=7$$ s = 7 TeV and p–Pb collisions at $${\sqrt{{{s}}_{\scriptscriptstyle {\mathrm{NN}}}}}=5.02$$ s NN = 5.02 TeVCited by: 21
Author(s): J. Adam, D. Adamová, M. M. Aggarwal, G. Aglieri Rinella, M. Agnello, N. Agrawal, Z. Ahammed, Shakeel Ahmad, S. U. Ahn, S. Aiola, A. Akindinov, Sk Noor Alam, D. S. D. Albuquerque, Dmitry Aleksandrov, B. Alessandro, D. Alexandre, R. Alfaro Molina, A. Alici, A. Alkin, J. R. M. Almaraz, J. Alme, T. Alt, S. Altinpinar, I. Altsybeev, C. Alves Garcia Prado, C. Andrei, A. Andronic, V. Anguelov, T. Antičić, F. Antinori, P. Antonioli, L. Aphecetche, H. Appelshäuser, S. Arcelli, R. Arnaldi, O. Arnold, I. C. Arsene, M. Arslandok, B. Audurier, A. Augustinus, R. Averbeck, M. D. Azmi, A. Badalà, Y. W. Baek, S. Bagnasco, R. Bailhache, R. Bala, S. Balasubramanian, A. Baldisseri, R. C. Baral, A. M. Barbano, R. Barbera, F. Barile, G. G. Barnaföldi, L. S. Barnby, V. Barret, P. Bartalini, K. Barth, J. Bartke, E. Bartsch, M. Basile, N. Bastid, S. Basu, B. Bathen, G. Batigne, A. Batista Camejo, B. Batyunya, P. C. Batzing, I. G. Bearden, H. Beck, C. Bedda, N. K. Behera, I. Belikov, F. Bellini, H. Bello Martínez, R. Bellwied, R. Belmont, E. Belmont‐Moreno, L. G. E. Beltran, V. Belyaev, G. Bencédi, S. Beolè, I. Berceanu, A. Bercuci, Y. Berdnikov, D. Berényi, R. A. Bertens, D. Berzano, L. Betev, A. Bhasin, I. R. Bhat, A. K. Bhati, B. Bhattacharjee, J. Bhom, L. Bianchi, N. Bianchi, C. Bianchin, J. Bielčík, J. Bielčíková, A. Bilandzic, G. Bíró, R. Biswas, S. Biswas, S. Bjelogrlic, Justin Thomas Blair, D. Blau, C. Blume, F. Bock, A. Bogdanov, H. Bøggild, L. Boldizsár, M. Bombara, M. Bonora, J. Book, H. Borel, A. Borissov, M. Borri, F. Bossú, E. Botta, C. Bourjau, P. Braun‐Munzinger, M. Bregant, T. Breitner, T. A. Broker, T. A. Browning, M. Broz, E. Brücken, E. Bruna, G. E. Bruno, D. Budnikov, H. Buesching, S. Bufalino, S. A. Iga Buitron, P. Bunčić, O. Busch, Z. Buthelezi, J. Butt, J. T. Buxton, J. Cabala, D. Caffarri, X. Cai, H. Caines, L. Calero Diaz, A. Caliva, E. Calvo Villar, P. Camerini, F. Carena, W. Carena, F. Carnesecchi, J. Castillo Castellanos, A. J. Castro, Ester Anna Rita Casula, C. Ceballos Sànchez, J. Cepila, P. Cerello, J. Cerkala, B. Chang, S. Chapeland, M. Chartier, J. L. Charvet, S. Chattopadhyay, A. Chauvin, V. Chelnokov, M. Cherney, C. Cheshkov, B. Cheynis, V. Chibante Barroso, D. D. Chinellato, S. Cho, P. Chochula, K. Choi, M. Chojnacki, S. Choudhury, P. Christakoglou, Christian Holm Christensen, P. Christiansen, T. Chujo, S. U. Chung, C. Cicalò, L. Cifarelli, F. Cindolo, J. Cleymans, F. Colamaria, D. Colella, A. Collu, M. Colocci, G. Conesa Balbastre, Z. Conesa del Valle, M. Connors, J. G. Contreras, T. M. Cormier, Y. Corrales Morales, I. Cortés Maldonado, P. Cortese, M. R. Cosentino, F. Costa, J. Crkovská, P. Crochet, R. Cruz Albino, E. Cuautle, L. Cunqueiro, T. Dahms, A. Dainese, Meike Charlotte Danisch, A. Danu, D. Das, I. Das, S. Das, A. Dash, S. Dash, S. De, A. De, G. de Cataldo, C. de Conti, J. de Cuveland, A. De Falco, D. De Gruttola, N. De Marco, S. De Pasquale, R. Derradi de Souza, A. Deisting, A. Deloff, E. Dénes, C. Deplano, P. Dhankher, D. Di Bari, A. Di Mauro, P. Di Nezza, B. Di Ruzza, M. A. Diaz Corchero, T. Dietel, P. Dillenseger, R. Divià, Ø. Djuvsland, A. Dobrin, D. Domenicis Gimenez, B. Dönigus, O. Dordic, T. Drozhzhova, A. K. Dubey, A. Dubla, L. Ducroux, P. Dupieux, R. J. Ehlers, D. Elia, E. Endress, H. Engel, E. Epple, B. Erazmus, I. Erdemir, F. Erhardt, B. Espagnon, M. Estienne, S. Esumi, J. Eum, D. Evans, S. Evdokimov, G. Eyyubova, L. Fabbietti, D. Fabris, J. Faivre, A. Fantoni, M. Fasel, L. Feldkamp, A. Feliciello, Г. Феофилов, J. Ferencei, A. Fernández Téllez, E. G. Ferreiro, A. Ferretti, A. Festanti, Victor Jose Gaston Feuillard, J. Figiel, M. A. S. Figueredo, S. Filchagin, D. Finogeev, F. M. Fionda, E. M. Fiore, M. G. Fleck, M. Floris, S. Foertsch, P. Foka, S. Fokin, E. Fragiacomo, A. Francescon, A. Francisco, U. Frankenfeld, G. G. Fronze, U. Fuchs, C. Furget, A. Furs, M. Fusco Girard, J. J. Gaardhøje, M. Gagliardi, A. M. Gago, K. Krizkova Gajdosova, M. Gallio, C. D. Galvan, D. R. Gangadharan, P. Ganoti, C. Gao, C. Garabatos, E. García-Solis, C. Gargiulo, P. Gasik, Erin Frances Gauger, M. Germain, M. Gheata, P. Ghosh, S. K. Ghosh, P. Gianotti, P. Giubellino, P. Giubilato, E. Gładysz-Dziaduś, P. Glässel, D. M. Goméz Coral, A. Gómez Ramírez, A. S. González, V. González, P. González-Zamora, S. Gorbunov, L. Görlich, S. Gotovac, V. Grabski, O. Grachov, L. K. Graczykowski, K. L. Graham, A. Grelli, A. Grigoras, C. Grigoras, V. Grigoriev, A. Grigoryan, S. Grigoryan, B. Grinyov, N. Grion, J. M. Gronefeld, J. F. Grosse-Oetringhaus, R. Grosso, L. Gruber, F. Guber, R. Guernane, B. Guerzoni, K. Gulbrandsen, T. Gunji, A. Gupta, R. Gupta, R. Haake, C. Hadjidakis, M. Haiduc, H. Hamagaki, G. Hamar, J. C. Hamon, J. W. Harris, A. Harton, D. Hatzifotiadou, S. Hayashi, S. T. Heckel, E. Hellbär, H. Helstrup, A. Herghelegiu, G. Herrera Corral, B. A. Hess, K. F. Hetland, H. Hillemanns, B. Hippolyte, D. Horak, R. Hosokawa, P. Hristov, C. Hughes, T. J. Humanic, N. Hussain, T. Hussain, D. Hutter, Dae Sung Hwang, R. Ilkaev, M. Inaba, E. Incani, M. Ippolitov, M. Irfan, В. В. Исаков, M. Ivanov, V. Ivanov, V. Izucheev, B. Jacak, N. Jacazio, P. Jacobs, M. B. Jadhav, S. Jadlovska, J. Jadlovsky, C. Jahnke, Monika Joanna Jakubowska, M. A. Janik, P. H. S. Y. Jayarathna, C. Jena, S. Jena, R. T. Jimenez Bustamante, P. G. Jones, A. Jusko, P. Kaliňák, A. Kalweit, J. H. Kang, V. Kaplin, S. Kar, A. Karasu Uysal, O. Karavichev, T. Karavicheva, L. Karayan, E. Karpechev, U. Kebschull, R. Keidel, D. L. D. Keijdener, M. Keil, M. Mohisin Khan, P. Khan, S. A. Khan, A. Khanzadeev, Y. Kharlov, B. Kileng, D. W. Kim, D. J. Kim, D. Kim, H. Kim, J. S. Kim, J. Kim, M. Kim, S. Kim, T. Kim, S. Kirsch, I. Kisel, S. Kiselev, A. Kisiel, G. Kiss, J. L. Klay, C. Klein, J. Klein, C. Klein-Bösing, S. Klewin, Alexander Kluge, M. L. Knichel, A. G. Knospe, C. Kobdaj, M. Kofarago, T. Kollegger, A. Kolojvari, V. Kondratiev, N. Kondratyeva, E. Kondratyuk, A. Konevskikh, M. Kopčík, M. Kour, C. Kouzinopoulos, O. Kovalenko, В. Коваленко, M. Kowalski, G. Koyithatta Meethaleveedu, I. Králik, A. Kravčáková, M. Krivda, F. Křížek, E. Kryshen, M. Krzewicki, A. M. Kubera, V. Kučera, C. Kuhn, P. G. Kuijer, Arun Kumar, J. Kumar, L. Kumar, Sanjeev Kumar, P. Kurashvili, A. Kurepin, A. Kuryakin, M. J. Kweon, Y. Kwon, Sarah Louise La Pointe, P. La Rocca, P. Ladrón de Guevara, C. Lagana Fernandes, I. Lakomov, R. Langoy, K. Lapidus, C. Lara, A. Lardeux, A. Lattuca, E. Laudi, R. Lea, L. Leardini, S. Lee, F. Lehas, S. Lehner, R. C. Lemmon, V. Lenti, E. Leogrande, I. Léon Monźon, H. León Vargas, M. Leoncino, P. Lévai, S. Li, X. Li, J. Lien, R. Lietava, S. Lindal, V. Lindenstruth, C. Lippmann, M. A. Lisa, H. M. Ljunggren, D. F. Lodato, P. I. Loenne, V. Loginov, C. Loizides, X. Lopez, E. López Torres, A. J. Lowe, P. Luettig, M. Lunardon, G. Luparello, M. Lupi, T. H. Lutz, A. Maevskaya, M. Mager, S. Mahajan, S. M. Mahmood, A. Maire, R. Majka, M. Malaev, I. Maldonado Cervantes, L. Malinina, D. Mal’Kevich, P. Malzacher, A. Mamonov, V. Manko, F. Manso, V. Manzari, Y. Mao, M. Marchisone, J. Mareš, G. V. Margagliotti, A. Margotti, J. Margutti, A. Marı́n, C. Markert, M. Marquard, N. A. Martin, P. Martinengo, M. Martı́nez, G. Martınez García, M. Martinez Pedreira, A. Mas, S. Masciocchi, M. Masera, A. Masoni, A. Mastroserio, A. Matyja, Christoph Mayer, J. Mazer, M. A. Mazzoni, D. McDonald, F. Meddi, Y. Melikyan, A. Menchaca‐Rocha, E. Meninno, J. Mercado Pérez, M. Meres, S. Mhlanga, Y. Miake, M. M. Mieskolainen, K. Mikhaylov, L. Milano, J. Milošević, A. Mischke, Aditya Nath Mishra, D. Miśkowiec, J. Mitra, C. M. Mitu, N. Mohammadi, B. Mohanty, L. Molnár, L. Montaño Zetina, E. Montes, D. A. Moreira De Godoy, L. A. P. Moreno, S. Moretto, A. Morreale, A. Morsch, V. Muccifora, E. Mudnić, D. Mühlheim, S. Muhuri, M. Mukherjee, J. D. Mulligan, M. G. Munhoz, K. Münning, Robert Helmut Münzer, H. Murakami, S. Murray, L. Musa, J. Mušinský, B. Naik, R. Nair, B. K. Nandi, R. Nania, E. Nappi, M. U. Naru, H. Natal da Luz, C. Nattrass, S. R. Navarro, K. Nayak, R. Nayak, T. K. Nayak, S. Nazarenko, A. Nedosekin, R. A. Negrao De Oliveira, L. Nellen, F. Ng, M. Nicassio, M. Niculescu, J. Niedziela, B. S. Nielsen, S. Nikolaev, S. Nikulin, V. Nikulin, F. Noferini, P. Nomokonov, G. Nooren, J. C. C. Noris, J. Norman, A. Nyanin, J. Nystrand, H. Oeschler, S. Oh, S. Oh, A. Ohlson, A. Okatan, T. Okubo, L. Oláh, J. Oleniacz, A. C. Oliveira Da Silva, Michael Henry Oliver, J. Onderwaater, C. Oppedisano, R. Orava, M. Oravec, A. Ortiz Velasquez, A. Öskarsson, J. Otwinowski, K. Oyama, K. Ozdemir, Y. Pachmayer, D. Pagano, P. Pagano, G. Paić, S. K. Pal, P. Palni, J. Pan, A. K. Pandey, V. Papikyan, G. S. Pappalardo, P. Pareek, J. Park, W. J. Park, S. Parmar, A. Passfeld, V. Paticchio, Rajendra Nath Patra, B. Paul, H. Pei, T. Peitzmann, X. Peng, H. Pereira Da Costa, D. Peresunko, E. Perez Lezama, V. Peskov, Y. Pestov, V. Petráček, V. Petrov, M. Petrovici, C. Petta, S. Piano, M. Pikna, P. Pillot, L. O. D. L. Pimentel, O. Pinazza, L. Pinsky, D. B. Piyarathna, M. Płoskoń, M. Planinić, J. Pluta, S. Pochybová, P. L.M. Podesta-Lerma, M. G. Poghosyan, B. Polichtchouk, N. Poljak, W. Poonsawat, A. Pop, H. Poppenborg, S. Porteboeuf-Houssais, J. Porter, J. Pospı́šil, Sidharth Kumar Prasad, R. Preghenella, F. Prino, C. Pruneau, I. Pshenichnov, M. Puccio, G. Puddu, P. R. Pujahari, V. Punin, J. Putschke, H. Qvigstad, A. Rachevski, S. Raha, S. Rajput, J. Rak, A. Rakotozafindrabe, L. Ramello, F. Rami, R. Raniwala, S. Raniwala, S. S. Räsänen, B. T. Rascanu, D. Rathee, K. F. Read, K. Redlich, R. Reed, A. Rehman, P. Reichelt, F. Reidt, X. Ren, R. Renfordt, A. R. Reolon, A. Reshetin, K. Reygers, V. Riabov, R. A. Ricci, T. Richert, Matthias Richter, P. Riedler, W. Riegler, F. Riggi, C. Ristea, E. Rocco, M. Rodríguez Cahuantzi, A. Rodriguez Manso, K. Røed, E. Rogochaya, D. Røhr, D. Röhrich, F. Ronchetti, L. Ronflette, P. Rosnet, A. Rossi, F. Roukoutakis, A. Roy, C. Roy, P. Roy, A. J. Rubio Montero, R. Rui, Riccardo Russo, E. Ryabinkin, Y. F. Ryabov, A. Rybicki, S. Saarinen, S. Sadhu, S. Sadovsky, K. Šafǎŕık, B. Sahlmuller, P. Sahoo, R. Sahoo, S. Sahoo, P. K. Sahu, J. Saini, S. Sakai, M. A. Saleh, J. Salzwedel, S. Sambyal, V. Samsonov, L. Šándor, A. Sandoval, M. Sano, D. Sarkar, N. Sarkar, P. Sarma, E. Scapparone, F. Scarlassara, C. Schiaua, R. Schicker, C. Schmidt, H. R. Schmidt, M. P. Schmidt, S. Schuchmann, J. Schukraft, Y. Schütz, K. Schwarz, K. Schweda, G. Scioli, E. Scomparin, R. Scott, M. Šefčík, J. Seger, Y. Sekiguchi, D. Sekihata, I. Selyuzhenkov, K. Senosi, S. Senyukov, E. Serradilla, A. Sevcenco, A. Shabanov, A. Shabetai, O. Shadura, R. Shahoyan, A. Shangaraev, A. Sharma, M. Sharma, N. Sharma, A. I. Sheikh, K. Shigaki, Q. Shou, K. Shtejer, Y. Sibiriak, S. Siddhanta, K. M. Sielewicz, T. Siemiarczuk, D. Silvermyr, C. Silvestre, G. Simatovic, G. Simonetti, R. Singaraju, R. Singh, V. Singhal, T. Sinha, B. Sitár, M. Sitta, T. B. Skaali, M. Słupecki, N. Smirnov, Raimond Snellings, T. W. Snellman, J. Song, M. Song, Z. Song, F. Soramel, S. Sörensen, F. Sozzi, E. Spiriti, I. Sputowska, M. Spyropoulou‐Stassinaki, J. Stachel, I. Stan, P. W. Stankus, E. Stenlund, G. Steyn, J. H. Stiller, D. Stocco, P. Strmeň, Alexandre Alarcon Do Passo Suaide, T. Sugitate, C. Suire, M. Suleymanov, M. Šuljić, R. Sultanov, M. Šumbera, S. Sumowidagdo, A. Szabó, I. Szarka, A. Szczepankiewicz, M. Szymański, U. Tabassam, J. Takahashi, Ganesh Jagannath Tambave, N. Tanaka, M. Tarhini, Mohammad Tariq, M. G. Târzilă, A. Tauro, G. Tejeda Muñoz, A. Telesca, K. Terasaki, C. Terrevoli, B. Teyssier, J. Thäder, D. Thakur, D. Thomas, R. Tieulent, A. Tikhonov, A. R. Timmins, A. Toia, S. Trogolo, G. Trombetta, V. Trubnikov, W. H. Trzaska, T. Tsuji, A. Tumkin, R. Turrisi, T. S. Tveter, K. Ullaland, A. Uras, G. Usai, A. Utrobicic, M. Vala, L. Valencia Palomo, S. Vallero, J. Van Der Maarel, J. W. Van Hoorne, M. van Leeuwen, T. Vǎnát, P. Vande Vyvre, D. Varga, A. Vargas, M. Vargyas, R. Varma, M. Vasileiou, A. Vasiliev, A. Vauthier, O. Vázquez Doce, V. Vechernin, A. M. Veen, A. Velure, E. Vercellin, S. Vergara Limón, R. Vernet, M. Verweij, L. Vickovic, J. Viinikainen, Z. Vilakazi, O. Villalobos Baillie, A. Villatoro Tello, А. Виноградов, L. Vinogradov, T. Virgili, V. Vislavicius, Y. P. Viyogi, A. Vodopyanov, Martin Andreas Volkl, K. Voloshin, S. A. Voloshin, G. Volpe, B. von Haller, I. Vorobyev, D. Vranić, J. Vrláková, B. Vulpescu, B. Wagner, Jan Wagner, H. Wang, M. Wang, Daisuke Watanabe, Y. Watanabe, M. Weber, S. G. Weber, D. F. Weiser, J. P. Wessels, U. Westerhoff, A. M. Whitehead, J. Wiechuła, J. Wikne, G. Wilk, J. Wilkinson, Guido Alexander Willems, M. C. S. Williams, B. Windelband, Michael Andreas Winn, S. Yalcin, P. Yang, S. Yano, Z. Yin, H. Yokoyama, I. K. Yoo, Ji Eun Lee, V. Yurchenko, A. Zaborowska, V. Zaccolo, A. Zaman, C. Zampolli, Henrique José Correia Zanoli, S. Zaporozhets, N. Zardoshti, A. Zarochentsev, P. Závada, N. Zaviyalov, H. Zbroszczyk, I. S. Zgura, M. Zhalov, H. Zhang, X. Zhang, Y. Zhang, C. Zhang, Z. Zhang, C. Zhao, N. Zhigareva, D. Zhou, Y. Zhou, Z. Zhou, H. Zhu, J. Zhu, A. Zichichi, A. Zimmermann, M. B. Zimmermann, G. Zinovjev, M. Zyzak
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.ppat.1004756
Structure of the Low pH Conformation of Chandipura Virus G Reveals Important Features in the Evolution of the Vesiculovirus GlycoproteinCited by: 21
Author(s): Eduard Baquero, Aurélie A. Albertini, Hélène Raux, Linda Buonocore, John K. Rose, Stéphane Bressanelli, Yves Gaudin
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.ppat.1005035
Characterization of a Prefusion-Specific Antibody That Recognizes a Quaternary, Cleavage-Dependent Epitope on the RSV Fusion GlycoproteinCited by: 101
Author(s): M.S.A. Gilman, Syed M. Moin, Vicente Más, Man Chen, Nita Patel, Kramer Kari, Qing Zhu, Stephanie C. Kabeche, Abhinav Kumar, Concepción Palomo, Tim Beaumont, Ulrich Baxa, Nancy D. Ulbrandt, José A. Melero, Barney S. Graham, Jason S. McLellan
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.ppat.1005042
Human Non-neutralizing HIV-1 Envelope Monoclonal Antibodies Limit the Number of Founder Viruses during SHIV Mucosal Infection in Rhesus MacaquesCited by: 132
Author(s): Sampa Santra, Georgia D. Tomaras, Ranjit Warrier, Nathan I. Nicely, Hua‐Xin Liao, Justin Pollara, Pinghuang Liu, S. Munir Alam, Ruijun Zhang, Sarah L. Cocklin, Xiaoying Shen, Ryan Duffy, Shi-Mao Xia, Robert J. Schutte, Charles W. Pemble, S. Moses Dennison, Hui Li, Andrew Chao, Kora Vidnovic, Abbey Evans, Katja Klein, Amit Kumar, James E. Robinson, Gary Landucci, Donald N. Forthal, David C. Montefiori, Jaranit Kaewkungwal, Sorachai Nitayaphan, Punnee Pitisuttithum, Supachai Rerks-Ngarm, Merlin L. Robb, Nelson L. Michael, Jerome H. Kim, Kelly A. Soderberg, Elena E. Giorgi, Lily Blair, Bette T. Korber, Christiane Moog, Robin J. Shattock, Norman L. Letvin, Jörn E. Schmitz, M. Anthony Moody, Feng Gao, Guido Ferrari, George M. Shaw, Barton F. Haynes
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.ppat.1005203
Crystal Structures of a Piscine Betanodavirus: Mechanisms of Capsid Assembly and Viral InfectionCited by: 102
Author(s): Nai Chi Chen, Masato Yoshimura, Hongbing Guan, Ting Yu Wang, Yuko Misumi, Chi‐Chang Lin, Phimonphan Chuankhayan, Atsushi Nakagawa, Sunney I. Chan, Tomitake Tsukihara, Tzong Yueh Chen, Chun‐Jung Chen
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.ppat.1005269
Structural Insight into Archaic and Alternative Chaperone-Usher Pathways Reveals a Novel Mechanism of Pilus BiogenesisCited by: 28
Author(s): Natalia Pakharukova, James A. Garnett, Minna Tuittila, Sari Paavilainen, Mamou Diallo, Yingqi Xu, Stephen Matthews, Anton V. Zavialov
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.ppat.1005411
An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell TropismCited by: 81
Author(s): Hao Song, Jianxun Qi, Zahra Khedri, Sandra Díaz, Hai Yu, Xi Chen, Ajit Varki, Yi Shi, George F. Gao
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.ppat.1005414
BS69/ZMYND11 C-Terminal Domains Bind and Inhibit EBNA2Cited by: 21
Author(s): Matthew R. Harter, Cheng-Der Liu, Chih-Lung Shen, Elsie Gonzalez-Hurtado, Zhimin Zhang, Muyu Xu, Ernest Martinez, Chih‐Wen Peng, Jikui Song
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.ppat.1005523
Initiation of RNA Polymerization and Polymerase Encapsidation by a Small dsRNA VirusCited by: 39
Author(s): Aaron M. Collier, Outi Lyytinen, Yusong R. Guo, Yukimatsu Toh, Minna M. Poranen, Yizhi Jane Tao
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.ppat.1005635
Atomic Structure and Biochemical Characterization of an RNA Endonuclease in the N Terminus of Andes Virus L ProteinCited by: 27
Author(s): Fernández-García Yaiza, Juan Reguera, Carola Busch, Gregor Witte, Sánchez-Ramos Oliberto, Christian Betzel, Stephen Cusack, Stephan Günther, Sophia Reindl
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.ppat.1005779
How Quorum Sensing Connects Sporulation to Necrotrophism in Bacillus thuringiensisCited by: 36
Author(s): Stéphane Perchat, Antoine Talagas, Sandrine Poncet, Noureddine Lazar, I. Li de la Sierra-Gallay, Michel Gohar, Didier Lereclus, Sylvie Nessler
Software Mentions: 1
Published: over 8 years ago