cran: MALDIquant | Projects | Ecosyste.ms: Papers

10.1002/pmic.201400392

Visualization of proteomics data using R and Bioconductor
Cited by: 46
Author(s): Laurent Gatto, Lisa M. Breckels, Thomas Naake, Sebastian Gibb
Software Mentions: 62
Published: over 9 years ago

Exploring the Potential of Micrococcus luteus Culture Supernatant With Resuscitation-Promoting Factor for Enhancing the Culturability of Soil Bacteria
Cited by: 9
Author(s): Marco Antonio Lopez Marin, Michal Strejcek, Petra Junková, Jáchym Šuman, Jiří Šantrůček, Ondřej Uhlík
Software Mentions: 10
Published: over 3 years ago

10.3390/genes12070995

Effects of the Developmental Regulator BOLITA on the Plant Metabolome
Cited by: 3
Author(s): Hugo Gerardo Lazcano-Ramírez, Roberto Gamboa-Becerra, Irving Jair Garcia-Lopez, Ricardo A. Chávez Montes, David Díaz-Ramírez, Octavio Martı́nez de la Vega, José Juan Ordaz-Ortíz, Stefan de Folter, Axel Tiessen-Favier, Robert Winkler, Nayelli Marsch-Martínez
Software Mentions: 9
Published: over 3 years ago

10.3390/s20236723

Wide Field Spectral Imaging with Shifted Excitation Raman Difference Spectroscopy Using the Nod and Shuffle Technique
Cited by: 7
Author(s): Florian Korinth, Elmar Schmälzlin, Clara Stiebing, T. Urrutia, Genoveva Micheva, C. Sandín, André Müller, Bernd Sumpf, Christoph Krafft, G. Tränkle, Martin Roth, Jürgen Popp
Software Mentions: 8
Published: about 4 years ago

10.1186/s13321-019-0338-7

Software solutions for evaluation and visualization of laser ablation inductively coupled plasma mass spectrometry imaging (LA-ICP-MSI) data: a short overview
Cited by: 30
Author(s): Ralf Weiskirchen, Sabine Weiskirchen, Philipp Kim, Robert Winkler
Software Mentions: 7
Published: almost 6 years ago

10.1128/mSphere.00806-20

Raman Spectroscopy-Based Measurements of Single-Cell Phenotypic Diversity in Microbial Populations
Cited by: 15
Author(s): Cristina García‐Timermans, Ruben Props, Boris Zacchetti, Myrsini Sakarika, Frank Delvigne, Nico Boon
Software Mentions: 7
Published: about 4 years ago

10.1038/s41598-018-37503-9

Combining MALDI-TOF and genomics in the study of methicillin resistant and multidrug resistant Staphylococcus pseudintermedius in New Zealand
Cited by: 30
Author(s): Shahista Nisa, Clément Bercker, Anne C. Midwinter, Ian J. Bruce, Chris Graham, Pierre Venter, A Bell, Nigel P. French, Jackie Benschop, Karen M. Bailey, David A. Wilkinson
Software Mentions: 6
Published: almost 6 years ago

10.7717/peerj.1401

An evolving computational platform for biological mass spectrometry: workflows, statistics and data mining with MASSyPup64
Cited by: 18
Author(s): Robert Winkler
Software Mentions: 6
Published: about 9 years ago

10.1038/s41598-021-98724-z

Novel attempt at discrimination of a bullet-shaped siphonophore (Family Diphyidae) using matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-ToF MS)
Cited by: 1
Author(s): Nayeon Park, Jisu Yeom, Raehyuk Jeong, Wonchoel Lee
Software Mentions: 6
Published: about 3 years ago

10.1371/journal.pone.0207051

A comparative venomic fingerprinting approach reveals that galling and non-galling fig wasp species have different venom profiles
Cited by: 4
Author(s): Leonardo Abdala Elias, Denise Brentan Silva, Ricardo Silva, Yan‐Qiong Peng, Da‐Rong Yang, Norberto P. Lopes, Rodrigo Augusto Santinelo Pereira
Software Mentions: 6
Published: about 6 years ago

10.1093/gigascience/giaa131

A methodological approach to correlate tumor heterogeneity with drug distribution profile in mass spectrometry imaging data
Cited by: 5
Author(s): Mridula Prasad, G.J. Postma, Pietro Franceschi, Lavinia Morosi, Silvia Giordano, Francesca Falcetta, Raffaella Giavazzi, Enrico Davoli, L.M.C. Buydens, Jeroen J. Jansen
Software Mentions: 6
Published: about 4 years ago

10.1186/s13567-020-00782-0

Genetic diversity and population structure of Tenacibaculum maritimum, a serious bacterial pathogen of marine fish: from genome comparisons to high throughput MALDI-TOF typing
Cited by: 19
Author(s): Sébastien Bridel, Frédéric Bourgeon, Arnaud Marie, Denis Saulnier, Sophie Pasek, Pierre Nicolas, Jean‐François Bernardet, Éric Duchaud
Software Mentions: 5
Published: over 4 years ago

10.3389/fmicb.2019.03000

Machine Learning Approach for Candida albicans Fluconazole Resistance Detection Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
Cited by: 26
Author(s): Margot Delavy, Lorenzo Cerutti, Antony Croxatto, Guy Prod’hom, Dominique Sanglard, Gilbert Greub, Alix T. Coste
Software Mentions: 5
Published: almost 5 years ago

10.26508/lsa.202000946

Prognostic accuracy of MALDI-TOF mass spectrometric analysis of plasma in COVID-19
Cited by: 23
Author(s): Lucas Cardoso Lázari, Fábio Ghilardi, Lívia Rosa-Fernandes, Diego M. Assis, José Carlos Nicolau, Verônica Feijoli Santiago, Talia Falcão Dalçóquio, Cláudia Blanes Angeli, Adriádne Justi Bertolin, Cláudio Romero Farias Marinho, Carsten Wrenger, Edison Luiz Durigon, Rinaldo Focaccia Siciliano, Giuseppe Palmisano
Software Mentions: 5
Published: over 3 years ago

10.3389/fcell.2021.655866

Proteomic Changes Associated With Sperm Fertilizing Ability in Meat-Type Roosters
Cited by: 4
Author(s): Anaïs Vitorino Carvalho, Laura Soler, Aurore Thélie, Isabelle Grasseau, Luiz Cordeiro, Daniel Tomas, Ana-Paula Teixeira-Gomes, Valérie Labas, Elisabeth Blesblois
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-018-33681-8

Pathogen Identification Direct From Polymicrobial Specimens Using Membrane Glycolipids
Cited by: 17
Author(s): William E. Fondrie, Tao Liang, Benjamin L. Oyler, Lisa M. Leung, Robert K. Ernst, Dudley K. Strickland, David R. Goodlett
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-018-29677-z

Automated analysis of lipid drug-response markers by combined fast and high-resolution whole cell MALDI mass spectrometry biotyping
Cited by: 18
Author(s): David Weigt, Denis A. Sammour, Timon Ulrich, Bogdan Munteanu, Carsten Hopf
Software Mentions: 5
Published: over 6 years ago

10.7717/peerj.11359

Development of an inexpensive matrix-assisted laser desorption—time of flight mass spectrometry method for the identification of endophytes and rhizobacteria cultured from the microbiome associated with maize
Cited by: 7
Author(s): Michael G. LaMontagne, Phi L. Tran, Alexander Benavidez, Lisa Morano
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2020.01931

Insights Into Subspecies Discrimination Potentiality From Bacteria MALDI-TOF Mass Spectra by Using Data Mining and Diversity Studies
Cited by: 10
Author(s): Audrey Giraud-Gatineau, Gaétan Texier, Éric Garnotel, Didier Raoult, Hervé Chaudet
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-019-47089-5

Quantitative Mass Spectrometry Imaging Reveals Mutation Status-independent Lack of Imatinib in Liver Metastases of Gastrointestinal Stromal Tumors
Cited by: 33
Author(s): Denis A. Sammour, Christian Marsching, Alexander Geisel, Katrin Erich, Sandra Schulz, Carina Ramallo Guevara, Jan Rabe, Alexander Marx, Peter Findeisen, Peter Hohenberger, Carsten Hopf
Software Mentions: 4
Published: over 5 years ago

10.1007/s00216-019-01976-y

Quantification of nitroaromatic explosives in contaminated soil using MALDI-TOF mass spectrometry
Cited by: 11
Author(s): Susan Kober, Henner Hollert, Marcus Frohme
Software Mentions: 3
Published: over 5 years ago

10.1002/mas.21602

Unsupervised machine learning for exploratory data analysis in imaging mass spectrometry
Cited by: 127
Author(s): Nico Verbeeck, Richard M. Caprioli, Raf Van de Plas
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2020.609033

Creation of an Online Platform for Identification of Microorganisms: Peak Picking or Full-Spectrum Analysis
Cited by: 3
Author(s): К. В. Старостин, Е. А. Демидов, Nikita I. Ershov, A. V. Bryanskaya, В. М. Ефимов, Valeriya N Shlyakhtun, S. E. Peltek
Software Mentions: 3
Published: about 4 years ago

10.3389/fmicb.2018.01294

Whole-Cell MALDI-TOF MS Versus 16S rRNA Gene Analysis for Identification and Dereplication of Recurrent Bacterial Isolates
Cited by: 67
Author(s): Michal Strejcek, Tereza Smrhova, Petra Junková, Ondřej Uhlík
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-017-04793-4

Identification of the ESKAPE pathogens by mass spectrometric analysis of microbial membrane glycolipids
Cited by: 56
Author(s): Lisa M. Leung, William E. Fondrie, Yohei Doi, J. Kristie Johnson, Dudley K. Strickland, Robert K. Ernst, David R. Goodlett
Software Mentions: 3
Published: over 7 years ago

10.1155/2016/3791214

A Support Vector Machine Classification of Thyroid Bioptic Specimens Using MALDI-MSI Data
Cited by: 17
Author(s): Manuel Galli, Italo Zoppis, Gabriele De Sio, Clizia Chinello, Fabio Pagni, Fulvio Magni, Giancarlo Mauri
Software Mentions: 3
Published: over 8 years ago

10.1093/gigascience/giz143

Accessible and reproducible mass spectrometry imaging data analysis in Galaxy
Cited by: 16
Author(s): Melanie Christine Föll, Lennart Moritz, Thomas Wollmann, Maren Nicole Stillger, Niklas Vockert, Martin Werner, Peter Bronsert, Karl Rohr, Björn Grüning, Oliver Schilling
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-021-84523-z

Detecting early myocardial ischemia in rat heart by MALDI imaging mass spectrometry
Cited by: 5
Author(s): Aleksandra Aljakna Khan, Nasim Bararpour, Marie Gorka, Timothée Joye, Sandrine Morel, Christophe Montessuit, Silke Grabherr, Tony Fracasso, Marc Augsburger, Brenda R. Kwak, Aurélien Thomas, Sara Sabatasso
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12859-015-0752-4

Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discovery
Cited by: 85
Author(s): Hugo López-Fernández, Hugo M. Santos, José Luís Capelo, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato
Software Mentions: 3
Published: about 9 years ago

10.3389/fgene.2021.635814

GeenaR: A Web Tool for Reproducible MALDI-TOF Analysis
Cited by: 3
Author(s): Eugenio Del Prete, Angelo Facchiano, Aldo Profumo, Claudia Angelini, Paolo Romano
Software Mentions: 3
Published: over 3 years ago

10.1128/mSystems.00320-21

Phylogenomic Characterization of a Novel Corynebacterium Species Associated with Fatal Diphtheritic Stomatitis in Endangered Yellow-Eyed Penguins
Cited by: 9
Author(s): Sarah C. Saunderson, Imen Nouioui, Anne C. Midwinter, David A. Wilkinson, Melanie Young, Kate McInnes, Jim Watts, Vartul Sangal
Software Mentions: 3
Published: over 3 years ago

10.7717/peerj-cs.585

Contrast optimization of mass spectrometry imaging (MSI) data visualization by threshold intensity quantization (TrIQ)
Cited by: 0
Author(s): Ignacio Rosas-Román, Robert Winkler
Software Mentions: 3
Published: over 3 years ago

10.3390/ijms21155326

Oviduct Fluid Extracellular Vesicles Change the Phospholipid Composition of Bovine Embryos Developed In Vitro
Cited by: 21
Author(s): Charles Banliat, Daniel Le Bourhis, Ophélie Bernardi, Daniel Tomas, Valérie Labas, Pascal Salvetti, Benoît Guyonnet, Pascal Mermillod, Marie Saint‐Dizier
Software Mentions: 3
Published: over 4 years ago

10.3390/ijms161226133

A Combined Metabolomic and Proteomic Analysis of Gestational Diabetes Mellitus
Cited by: 24
Author(s): Joanna Hajduk, Agnieszka Klupczynska, Paweł Dereziński, Jan Matysiak, Piotr Kokot, Dorota Nowak, Marzena Gajęcka, Ewa Nowak‐Markwitz, Zenon J. Kokot
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pone.0201793

MALDI-TOF analysis of blood serum proteome can predict the presence of monoclonal gammopathy of undetermined significance
Cited by: 7
Author(s): Francisca Barceló, Rosa M. Gomila, I. de Paul, Xavier Gili, J. Segura, Albert Pérez-Montaña, Teresa Jimenez‐Marco, Antònia Sampol, José Portugal
Software Mentions: 3
Published: over 6 years ago

10.1093/bioinformatics/btv146

Cardinal: an R package for statistical analysis of mass spectrometry-based imaging experiments
Cited by: 186
Author(s): Kyle D. Bemis, April Harry, Lívia S. Eberlin, Christina R. Ferreira, Stephanie M. W. Y. van de Ven, Parag Mallick, Mark L. Stolowitz, Olga Vitek
Software Mentions: 3
Published: almost 10 years ago

10.3390/cancers11091377

MALDI-MSI as a Complementary Diagnostic Tool in Cytopathology: A Pilot Study for the Characterization of Thyroid Nodules
Cited by: 22
Author(s): Giulia Capitoli, Isabella Piga, Stefania Galimberti, Davide Leni, Angela Ida Pincelli, Mattia Garancini, Francesca Clerici, Allia Mahajneh, Virginia Brambilla, Andrew Smith, Fulvio Magni, Fabio Pagni
Software Mentions: 3
Published: over 5 years ago

10.3389/fpls.2019.00172

Live Single-Cell Metabolomics With Matrix-Free Laser/Desorption Ionization Mass Spectrometry to Address Microalgal Physiology
Cited by: 25
Author(s): Tim U. H. Baumeister, Marine Vallet, Filip Kaftan, Aleš Svatoš, Georg Pohnert
Software Mentions: 2
Published: almost 6 years ago

10.1007/s00216-019-01826-x

Improved matrix coating for positive- and negative-ion-mode MALDI-TOF imaging of lipids in blood vessel tissues
Cited by: 13
Author(s): Christina Meisenbichler, Christian Doppler, David Bernhard, Thomas Müller
Software Mentions: 2
Published: over 5 years ago

10.1186/s12859-017-1565-4

Sparse Proteomics Analysis – a compressed sensing-based approach for feature selection and classification of high-dimensional proteomics mass spectrometry data
Cited by: 19
Author(s): Tim Conrad, Martin Genzel, Nada Cvetković, Niklas Wulkow, Alexander Benedikt Leichtle, Jan Vybíral, Gitta Kutyniok, Christof Schütte
Software Mentions: 2
Published: almost 8 years ago

10.1002/btm2.10200

Screening of important metabolites and KRAS genotypes in colon cancer using secondary ion mass spectrometry
Cited by: 3
Author(s): Kookrae Cho, Eun Kyung Choi, Sung Young Lee, Jung-Hee Kim, Dae Won Moon, Jong‐Wuk Son, Eun-Joo Kim
Software Mentions: 2
Published: about 4 years ago

10.1093/bioinformatics/bty622

SPUTNIK: an R package for filtering of spatially related peaks in mass spectrometry imaging data
Cited by: 17
Author(s): Paolo Inglese, Gonçalo dos Santos Correia, Zoltan Takáts, Jeremy K. Nicholson, Robert C. Glen
Software Mentions: 2
Published: over 6 years ago

10.3390/molecules25173857

FLIm and Raman Spectroscopy for Investigating Biochemical Changes of Bovine Pericardium upon Genipin Cross-Linking
Cited by: 6
Author(s): Tanveer Ahmed Shaik, Alba Alfonso‐Garcia, Martin Richter, Florian Korinth, Christoph Krafft, Laura Marcu, Jürgen Popp
Software Mentions: 2
Published: over 4 years ago

10.3390/vaccines9030249

Association between Venom Immunotherapy and Changes in Serum Protein—Peptide Patterns
Cited by: 3
Author(s): Joanna Matysiak, Eliza Matuszewska, Marek L. Kowalski, S Kosiński, Ewa Smorawska-Sabanty, Jan Matysiak
Software Mentions: 2
Published: almost 4 years ago

10.1186/1756-3305-7-392

Species determination of Culicoides biting midges via peptide profiling using matrix-assisted laser desorption ionization mass spectrometry
Cited by: 15
Author(s): K. Uhlmann, Sebastian Gibb, Stefan Kalkhof, Uriel Arroyo‐Abad, Claudia Schulz, Bernd Hoffmann, Francesca Stubbins, Simon Carpenter, Martin von Bergen, Ralph Feltens
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0182962

Identification of Shiga-Toxigenic Escherichia coli outbreak isolates by a novel data analysis tool after matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
Cited by: 5
Author(s): Coralie Martin, Dirk Dressler, Mark Andrian, Claudia Reule, Orlando Petrini
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0101924

Rapid MALDI-TOF Mass Spectrometry Strain Typing during a Large Outbreak of Shiga-Toxigenic Escherichia coli
Cited by: 82
Author(s): Coralie Martin, Maria Trusch, Holger Rohde, Marcel Kwiatkowski, Hartmut Schlüter, Manuel Wolters, Martin Aepfelbacher, Moritz Hentschke
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0194212

Rapid and easy detection of low-level resistance to vancomycin in methicillin-resistant Staphylococcus aureus by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
Cited by: 15
Author(s): Kota Asakura, Takuya Azechi, Hiroshi Sasano, Hidehito Matsui, Hideaki Hanaki, Motonobu Miyazaki, Tohru Takata, Miwa Sekine, Tomoiku Takaku, Tomonori Ochiai, Norio Komatsu, Keigo Shibayama, Yuki Katayama, Koji Yahara
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0218951

MALDI-TOF mass spectrometry on intact bacteria combined with a refined analysis framework allows accurate classification of MSSA and MRSA
Cited by: 28
Author(s): Wenhao Tang, Nisha Ranganathan, Vahid Shahrezaei, Gérald Larrouy-Maumus
Software Mentions: 2
Published: over 5 years ago

10.3390/diagnostics10121077

The Activation of Prothrombin Seems to Play an Earlier Role than the Complement System in the Progression of Colorectal Cancer: A Mass Spectrometry Evaluation
Cited by: 6
Author(s): Maider Beitia, Paolo Romano, Gorka Larrinaga, Jon Danel Solano-Iturri, Annalisa Salis, Gianluca Damonte, Marco Bruzzone, Marcello Ceppi, Aldo Profumo
Software Mentions: 2
Published: about 4 years ago

10.3389/fimmu.2021.679398

High Mobility Group Box 1 Contributes to the Acute Rejection of Liver Allografts by Activating Dendritic Cells
Cited by: 6
Author(s): Yi Chen, Wenmin Zhang, Hui Bao, Wubing He, Lihong Chen
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2019.00471

Subspecies Typing of Streptococcus agalactiae Based on Ribosomal Subunit Protein Mass Variation by MALDI-TOF MS
Cited by: 16
Author(s): Julian Rothen, Joël F. Pothier, Frédéric Foucault, Jochen Blom, Dulmini Nanayakkara, Carmen Li, Margaret Ip, Marcel Tanner, Guido Vogel, Valentin Pflüger, Claudia Daubenberger
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13059-017-1190-6

Genomic history of the origin and domestication of common bean unveils its closest sister species
Cited by: 109
Author(s): Martha Rendón-Anaya, Josaphat Miguel Montero-Vargas, Soledad Saburido-Álvarez, Anna Vlasova, Salvador Capella-Gutierrez, José Juan Ordaz-Ortíz, O. Mario Aguilar, Rosana Pereira Vianello-Brondani, Marta Santalla, Luis Delaye, Toni Gabaldón, Paul Gepts, Robert Winkler, Roderic Guigó, Alfonso Delgado‐Salinas, Alfredo Herrera-Estrella
Software Mentions: 2
Published: over 7 years ago

10.1186/s12953-016-0107-8

Informed baseline subtraction of proteomic mass spectrometry data aided by a novel sliding window algorithm
Cited by: 5
Author(s): Tyman Stanford, Christopher J. Bagley, P. J. Solomon
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-017-18477-6

Fourier Transform Infrared Microscopy Enables Guidance of Automated Mass Spectrometry Imaging to Predefined Tissue Morphologies
Cited by: 33
Author(s): Jan Rabe, Denis A. Sammour, Sandra Schulz, Bogdan Munteanu, Martina Ott, Katharina Ochs, Peter Hohenberger, Alexander Marx, Michael Platten, Christiane A. Opitz, Daniel S. Ory, Carsten Hopf
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-018-29727-6

Metabolomic and lipidomic profile in men with obstructive sleep apnoea: implications for diagnosis and biomarkers of cardiovascular risk
Cited by: 40
Author(s): Adriana Lebkuchen, Valdemir Melechco Carvalho, Gabriela Venturini, Jéssica Silva Salgueiro, Lunara S. Freitas, Alessandra Dellavance, Franco Chies Martins, Geraldo Lorenzi‐Filho, Karina Helena Morais Cardozo, Luciano F. Drager
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-45718-7

Revealing higher than expected diversity of Harpacticoida (Crustacea:Copepoda) in the North Sea using MALDI-TOF MS and molecular barcoding
Cited by: 26
Author(s): Sven Rossel, Pedro Martínez Arbizu
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-65314-4

Metabolomic effects of the colonization of Medicago truncatula by the facultative endophyte Arthrobacter agilis UMCV2 in a foliar inoculation system
Cited by: 13
Author(s): Arturo Ramírez-Ordorica, Eduardo Valencia-Cantero, Idolina Flores-Cortez, María Teresa Carrillo-Rayas, Ma. Isabel Cristina Elizarraraz-Anaya, Josaphat Miguel Montero-Vargas, Robert Winkler, Lourdes Macías‐Rodríguez
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-021-82308-y

Salicylic acid stabilizes Staphylococcus aureus biofilm by impairing the agr quorum-sensing system
Cited by: 24
Author(s): Cristián Dotto, Andrea Lombarte Serrat, Martín Ledesma, Carlos Vay, Monika Ehling‐Schulz, D O Sordelli, Tom Grunert, Fernanda R. Buzzola
Software Mentions: 2
Published: almost 4 years ago

10.1128/mSystems.00902-21

SubTap, a Versatile 3D Printed Platform for Eavesdropping on Extracellular Interactions
Cited by: 1
Author(s): Caroline Birer-Williams, Rosalie K. Chu, Christopher R. Anderton, Erik S. Wright
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0188217

A novel method to rapidly distinguish the geographical origin of traditional fermented-salted vegetables by mass fingerprinting
Cited by: 13
Author(s): So‐Ra Yoon, Sung Hyun Kim, Hae-Won Lee, Ji‐Hyoung Ha
Software Mentions: 1
Published: about 7 years ago

10.1186/s12896-015-0140-1

Quantitative whole-cell MALDI-TOF MS fingerprints distinguishes human monocyte sub-populations activated by distinct microbial ligands
Cited by: 19
Author(s): Damien Portevin, Valentin Pflüger, Patricia Otieno, René A. Brunisholz, Guido Vogel, Claudia Daubenberger
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.8888

Distinct gene expression and secondary metabolite profiles insuppressor of prosystemin-mediated responses2 (spr2)tomato mutants having impaired mycorrhizal colonization
Cited by: 5
Author(s): Kena Casarrubias-Castillo, Josaphat Miguel Montero-Vargas, Nicole Dabdoub-González, Robert Winkler, Norma Martínez‐Gallardo, Julia Zañudo‐Hernández, Hamlet Avilés-Arnaut, John Paul Délano‐Frier
Software Mentions: 1
Published: over 4 years ago

10.1128/AEM.01825-18

Trichoderma atroviride from Predator to Prey: Role of the Mitogen-Activated Protein Kinase Tmk3 in Fungal Chemical Defense against Fungivory by Drosophila melanogaster Larvae
Cited by: 18
Author(s): Karina Atriztán-Hernández, Abigail Moreno-Pedraza, Robert Winkler, Therese A. Markow, Alfredo Herrera-Estrella
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-75960-3

MALDI-TOF MS and genomic analysis can make the difference in the clarification of canine brucellosis outbreaks
Cited by: 9
Author(s): David Attuy Vey da Silva, Holger Brendebach, Josephine Grützke, Ralf Dieckmann, Rodrigo Martins Soares, Júlia Teresa Ribeiro de Lima, Lara Borges Keid, Dirk Hofreuter, Sascha Al Dahouk
Software Mentions: 1
Published: about 4 years ago

10.1186/s12859-018-2221-3

Semi-supervised machine learning for automated species identification by collagen peptide mass fingerprinting
Cited by: 26
Author(s): Muxin Gu, Michael Buckley
Software Mentions: 1
Published: over 6 years ago

10.3390/molecules24163011

A Mass Spectrometry-Based Study Shows that Volatiles Emitted by Arthrobacter agilis UMCV2 Increase the Content of Brassinosteroids in Medicago truncatula in Response to Iron Deficiency Stress
Cited by: 4
Author(s): Idolina Flores-Cortez, Robert Winkler, Arturo Ramírez-Ordorica, Ma. Isabel Cristina Elizarraraz-Anaya, María Teresa Carrillo-Rayas, Eduardo Valencia-Cantero, Lourdes Macías‐Rodríguez
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules26195880

Utilizing AgNPt-SALDI to Classify Edible Oils by Multivariate Statistics of Triacylglycerol Profile
Cited by: 1
Author(s): Tzu-Ling Yang, Cheng‐Liang Huang, Chuping Lee
Software Mentions: 1
Published: about 3 years ago

10.1038/srep36814

Assessment of pathological response to therapy using lipid mass spectrometry imaging
Cited by: 31
Author(s): Nathan Heath Patterson, Balqis Alabdulkarim, Anthoula Lazaris, Aurélien Thomas, M. Marcinkiewicz, Zu‐Hua Gao, Peter Vermeulen, Pierre Chaurand, Peter Metrakos
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2015.00791

MALDI-TOF mass spectrometry: an emerging technology for microbial identification and diagnosis
Cited by: 926
Author(s): Neelja Singhal, Manish Kumar, Pawan Kumar Kanaujia, Jugsharan Singh Virdi
Software Mentions: 1
Published: over 9 years ago

10.3390/metabo11060333

Rapid Discrimination and Authentication of Korean Farmstead Mozzarella Cheese through MALDI-TOF and Multivariate Statistical Analysis
Cited by: 3
Author(s): Sujatha Kandasamy, Jayeon Yoo, Jeonghee Yun, Hyung Seok Kang, Kuk-Hwan Seol, Jun-Sang Ham
Software Mentions: 1
Published: over 3 years ago

10.1186/s12014-016-9110-4

Challenges and opportunities of bovine milk analysis by mass spectrometry
Cited by: 31
Author(s): Aparna Verma, Kiran Ambatipudi
Software Mentions: 1
Published: over 8 years ago

10.1186/s12879-018-3266-7

MALDI-TOF MS monitoring of PBMC activation status in sepsis
Cited by: 8
Author(s): Aurélie Daumas, Julie Alingrin, Richard Ouedraogo, Patrick Villani, Marc Léone, Jean‐Louis Mège
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0102620

Analysis of the Phospholipid Profile of Metaphase II Mouse Oocytes Undergoing Vitrification
Cited by: 21
Author(s): Jaehun Jung, Hyejin Shin, So-Young Bang, Hyuck Jun Mok, Chang Suk Suh, Kwang Pyo Kim, Hyunjung Jade Lim
Software Mentions: 1
Published: over 10 years ago

Projects: cran: MALDIquant

Papers Mentioning MALDIquant 74