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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.3390/genes12070995

https://doi.org/10.3390/genes12070995

Effects of the Developmental Regulator BOLITA on the Plant Metabolome

Cited by: 3
Author(s): Hugo Gerardo Lazcano-Ramírez, Roberto Gamboa-Becerra, Irving Jair Garcia-Lopez, Ricardo A. Chávez Montes, David Díaz-Ramírez, Octavio Martı́nez de la Vega, José Juan Ordaz-Ortíz, Stefan de Folter, Axel Tiessen-Favier, Robert Winkler, Nayelli Marsch-Martínez
Published: about 4 years ago

Software Mentions 9

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
Very Likely Science (100)
bioconductor: xcms
LC-MS and GC-MS Data Analysis
Papers that mentioned: 68
Very Likely Science (100)
cran: MALDIquant
Quantitative Analysis of Mass Spectrometry Data
Papers that mentioned: 74
Very Likely Science (85)
cran: MALDIquantForeign
Import/Export Routines for 'MALDIquant'
Papers that mentioned: 21
Very Likely Science (75)
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
Very Likely Science (75)
cran: pvclust
Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
Papers that mentioned: 442
Very Likely Science (75)
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
Very Likely Science (100)
pypi: xcms
calculated extended contact mode score provided the query and template protein-ligand structures
Papers that mentioned: 68
Likely Science (55)