cran: JASPAR | Projects | Ecosyste.ms: Papers

10.1038/s41388-018-0298-9

C5a induces A549 cell proliferation of non-small cell lung cancer via GDF15 gene activation mediated by GCN5-dependent KLF5 acetylation
Cited by: 44
Author(s): Cheng Zhao, Yong-Ting Li, Wen Qiu, Fengxia He, Weiming Zhang, Dan Zhao, Zhiwei Zhang, Erbao Zhang, Pei Ma, Yiqian Liu, Ling Ma, Fengming Yang, Yingwei Wang, Yongqian Shu
Software Mentions: 1
Published: over 6 years ago

10.1038/s41388-018-0628-y

RETRACTED ARTICLE: YAP1-induced MALAT1 promotes epithelial–mesenchymal transition and angiogenesis by sponging miR-126-5p in colorectal cancer
Cited by: 179
Author(s): Zhenqiang Sun, Chunlin Ou, Zhibin Wang, Chen Chen, Quanbo Zhou, Shenghong Yang, Guiyuan Li, Guixian Wang, Junmin Song, Zhen Li, Zhiyong Zhang, Weitang Yuan, Xiayu Li
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41388-018-0476-9

Unbalanced YAP–SOX9 circuit drives stemness and malignant progression in esophageal squamous cell carcinoma
Cited by: 65
Author(s): Lianghai Wang, Zhe Zhang, Xiaodan Yu, Xuan Huang, Lianwen Zheng, Yuhang Chai, Lei Yang, Qian Wang, Man Li, Jin Zhao, Jun Hou, Feng Li
Software Mentions: 1
Published: about 6 years ago

10.1038/s41388-019-0962-8

Targeting the TR4 nuclear receptor-mediated lncTASR/AXL signaling with tretinoin increases the sunitinib sensitivity to better suppress the RCC progression
Cited by: 22
Author(s): Hangchuan Shi, Yin Sun, Miao He, Xiong Yang, Michiaki Hamada, Tsukasa Fukunaga, Xiaoping Zhang, Chawnshang Chang
Software Mentions: 1
Published: about 5 years ago

10.1038/s41388-019-1107-9

TGF-β1 accelerates the hepatitis B virus X-induced malignant transformation of hepatic progenitor cells by upregulating miR-199a-3p
Cited by: 12
Author(s): Kai Dong, Chen Yan, Guang Yang, Zhibin Liao, Hongwei Zhang, Huifang Liang, Xiaoping Chen, Haotian Dong
Software Mentions: 1
Published: about 5 years ago

10.1038/s41388-020-01388-8

AR-induced long non-coding RNA LINC01503 facilitates proliferation and metastasis via the SFPQ-FOSL1 axis in nasopharyngeal carcinoma
Cited by: 21
Author(s): Shiwei He, Cheng Xu, Ying-Qing Li, Yin Zhao, Panpan Zhang, Yuan Liu, Ye‐Lin Liang, Junyan Li, Qian Li, Chen Yang, Shao Min Huang, Jun Ma, Na Liu
Software Mentions: 1
Published: over 4 years ago

10.1038/s41388-020-01450-5

High-metastatic cancer cells derived exosomal miR92a-3p promotes epithelial-mesenchymal transition and metastasis of low-metastatic cancer cells by regulating PTEN/Akt pathway in hepatocellular carcinoma
Cited by: 101
Author(s): Beng Yang, Xiaode Feng, Hua Liu, Rongliang Tong, Jingbang Wu, Changbiao Li, Hanxi Yu, Yunhao Chen, Qiyang Cheng, Junru Chen, Xianlei Cai, Wenxuan Wu, Yuejie Lu, Jiating Hu, Kejiong Liang, Zhen Lv, Jian Wu, Shusen Zheng
Software Mentions: 1
Published: about 4 years ago

10.1038/s41388-020-01635-y

Hypoxia-induced PLOD1 overexpression contributes to the malignant phenotype of glioblastoma via NF-κB signaling
Cited by: 31
Author(s): Zhenlin Wang, Yun Shi, Chenting Ying, Yang Jiang, Jiangfeng Hu
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41388-020-01616-1

Androgen receptor promotes renal cell carcinoma (RCC) vasculogenic mimicry (VM) via altering TWIST1 nonsense-mediated decay through lncRNA-TANAR
Cited by: 18
Author(s): Bosen You, Yin Sun, Jie Luo, Keliang Wang, Qing Liu, Ruizhe Fang, Bingmei Liu, Fu-Ju Chou, Ronghao Wang, Jialin Meng, Chi‐Ping Huang, Shuyuan Yeh, Chawnshang Chang, Wanhai Xu
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41388-021-01740-6

POU1F1 transcription factor induces metabolic reprogramming and breast cancer progression via LDHA regulation
Cited by: 26
Author(s): Anxo Martínez-Ordóñez, Samuel Seoane, Leandro Avila, Noemí Eiró, Manuel Macı́a, Efigenia Arias, Фернандо Лобо Перейра, Tomás García‐Caballero, Noemí Gómez-Lado, Pablo Aguiar, F Vizoso, Román Perez-Fernandez
Software Mentions: 1
Published: over 3 years ago

10.1038/s41388-021-01788-4

C/EBPβ promotes poly(ADP-ribose) polymerase inhibitor resistance by enhancing homologous recombination repair in high-grade serous ovarian cancer
Cited by: 8
Author(s): Jiahong Tan, Zheng Xu, Mengchen Li, Fei Ye, Chunyan Song, Changwu Xu, Xiaoxue Zhang, Wenqian Li, Ya Wang, Shaoqing Zeng, Huayi Li, Gang Chen, Xiaoyuan Huang, Ding Ma, Dan Liŭ, Qinglei Gao
Software Mentions: 1
Published: over 3 years ago

10.1038/s41388-021-01845-y

Long non-coding RNA Lnc-408 promotes invasion and metastasis of breast cancer cell by regulating LIMK1
Cited by: 15
Author(s): Yina Qiao, Tengchuan Jin, Shengdong Guan, Shaojie Cheng, Siyang Wen, Hualin Zeng, Mingqiu Zhao, Liping Yang, Xueying Wan, Yumin Qiu, Qiao Li, Manran Liu, Yixuan Hou
Software Mentions: 1
Published: over 3 years ago

10.1038/s41388-021-01900-8

NF-κB-activated SPRY4-IT1 promotes cancer cell metastasis by downregulating TCEB1 mRNA via Staufen1-mediated mRNA decay
Cited by: 12
Author(s): Lin Zhao, Longyang Jiang, Ming Zhang, Zhang Qiang, Qiutong Guan, Yalun Li, Miao He, Jingdong Zhang, Minjie Wei
Software Mentions: 1
Published: over 3 years ago

10.1038/s41388-021-01864-9

SOX9 is a critical regulator of TSPAN8-mediated metastasis in pancreatic cancer
Cited by: 19
Author(s): Junjian Li, Xiaoliang Chen, Lin Zhu, Zhenghong Lao, Tianhao Zhou, Lijuan Zang, Weiting Ge, Min Jiang, Jingxuan Xu, Yuan Cao, Shaoqian Du, Yue Yu, Guangjian Fan, Hongxia Wang
Software Mentions: 1
Published: over 3 years ago

10.1038/s41388-021-01948-6

The ELF3-regulated lncRNA UBE2CP3 is over-stabilized by RNA–RNA interactions and drives gastric cancer metastasis via miR-138-5p/ITGA2 axis
Cited by: 36
Author(s): Dandan Li, Jiajun She, Xinhui Hu, Meixin Zhang, Rong Sun, Shanshan Qin
Software Mentions: 1
Published: over 3 years ago

10.1038/s41389-018-0113-z

Estrogen receptor-α regulation of microRNA-590 targets FAM171A1—a modifier of breast cancer invasiveness
Cited by: 9
Author(s): Rahul Sanawar, Vipin Mohan Dan, T.R. Santhoshkumar, Rakesh Kumar, M. Radhakrishna Pillai
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41389-019-0131-5

CUL4B promotes prostate cancer progression by forming positive feedback loop with SOX4
Cited by: 18
Author(s): Mei Qi, Jing Hu, Yanyi Cui, Meng Ji, Tingting Feng, Xinjun Li, Yu Pang, Xinyi Chen, Ruixi Qin, Peng Su, Hui Zhang, Yan Wang, Yaoqin Gong, Bo Han
Software Mentions: 1
Published: over 5 years ago

10.1038/s41389-020-00283-x

Nuclear FOXP3 inhibits tumor growth and induced apoptosis in hepatocellular carcinoma by targeting c-Myc
Cited by: 13
Author(s): Zhongqin Gong, Jia Hao, Jianqing Yu, Yi Liu, Jianwei Ren, Shengli Yang, Baoguang Hu, Liping Liu, Paul Lai, George G Chen
Software Mentions: 1
Published: about 4 years ago

10.1038/s41389-021-00347-6

E2F1 and epigenetic modifiers orchestrate breast cancer progression by regulating oxygen-dependent ESRP1 expression
Cited by: 10
Author(s): Cheemala Ashok, Neha Ahuja, Subhashis Natua, Jharna Mishra, Atul Samaiya, Sanjeev Shukla
Software Mentions: 1
Published: over 3 years ago

10.1007/s00109-020-01942-7

Genetically programmed changes in transcription of the novel progranulin regulator
Cited by: 4
Author(s): Maria Keller, Claudia Gebhardt, Sandra Huth, Dorit Schleinitz, Henrike O. Heyne, Markus Scholz, Michael Stümvoll, Yvonne Böttcher, Anke Tönjes, Peter Kovacs
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.29656

An FGF-driven feed-forward circuit patterns the cardiopharyngeal mesoderm in space and time
Cited by: 25
Author(s): Florian Razy-Krajka, Basile Gravez, Nicole Kaplan, Claudia Racioppi, Wei Wang, Lionel Christiaen
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.25094

Dual role for Jumu in the control of hematopoietic progenitors in the Drosophila lymph gland
Cited by: 30
Author(s): Yangguang Hao, Li Jin
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.50731

MYC and Twist1 cooperate to drive metastasis by eliciting crosstalk between cancer and innate immunity
Cited by: 34
Author(s): Renumathy Dhanasekaran, Virginie Baylot, Minsoon Kim, Sibu Kuruvilla, David I. Bellovin, Nia Adeniji, Anand Rajan Kd, Ian Lai, Meital Gabay, Taotao Ling, Maya S. Krishnan, Jangho Park, Theodore Hu, Mustafa A. Barbhuiya, Andrew J. Gentles, Kasthuri Kannan, Phuoc T. Tran, Dean W. Felsher
Software Mentions: 1
Published: almost 5 years ago

10.7554/eLife.38070

Generative modeling of multi-mapping reads with mHi-C advances analysis of Hi-C studies
Cited by: 26
Author(s): Yi Zheng, Ferhat Ay, Sündüz Keleş
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms141020820

Identification of Novel MicroRNAs in Primates by Using the Synteny Information and Small RNA Deep Sequencing Data
Cited by: 1
Author(s): Zhixiang Yuan, Hongde Liu, Yumin Nie, Suping Ding, Mingli Yan, Suxu Tan, Yuanchang Jin, Xiao Sun
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms16046757

In Silico Analysis of the Genes Encoding Proteins that Are Involved in the Biosynthesis of the RMS/MAX/D Pathway Revealed New Roles of Strigolactones in Plants
Cited by: 54
Author(s): Marek Marzec, Aleksandra Muszyńska
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms161025759

Identification and Analysis of Regulatory Elements in Porcine Bone Morphogenetic Protein 15 Gene Promoter
Cited by: 5
Author(s): Qianhui Wan, Yaxian Wang, Huayan Wang
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms17101737

Zinc Finger and X-Linked Factor (ZFX) Binds to Human SET Transcript 2 Promoter and Transactivates SET Expression
Cited by: 15
Author(s): Siliang Xu, Peng Duan, Jinping Li, Tristan Senkowski, Feng-Biao Guo, Haibin Chen, A. Romero, Yugui Cui, Jiayin Liu, Shi‐Wen Jiang
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms19030864

Allopregnanolone Alters the Gene Expression Profile of Human Glioblastoma Cells
Cited by: 9
Author(s): Carmen J. Zamora-Sánchez, Aylin Del Moral-Morales, Ana M Hernández-Vega, Valeria Hansberg-Pastor, Iván Salido-Guadarrama, Mauricio Rodríguez-Dorantes, Ignacio Camacho‐Arroyo
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms19103037

Knockdown of LXRα Inhibits Goat Intramuscular Preadipocyte Differentiation
Cited by: 15
Author(s): Yan Xiong, Qiyou Xu, Senjie Lin, Yong Wang, Yaqiu Lin, Jiangjiang Zhu
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms20061398

Altered Promoter and G-Box Binding Factor for 1-Deoxy-d-Xylulose-5-Phosphate Synthase Gene Grown from Poa pratensis Seeds after Spaceflight
Cited by: 0
Author(s): Lu Gan, Yuehui Chao, Haotian Su, Yujing Ren, Shaowu Yin, Liebao Han
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms20071801

Molecular Cloning, Characterization, and Nutritional Regulation of Elovl6 in Large Yellow Croaker (Larimichthys crocea)
Cited by: 23
Author(s): Yongnan Li, Yuning Pang, Xiaojun Xiang, Jiangfeng Du, Kangsen Mai, Qinghui Ai
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms20205059

Angiotensin II Influences Pre-mRNA Splicing Regulation by Enhancing RBM20 Transcription Through Activation of the MAPK/ELK1 Signaling Pathway
Cited by: 12
Author(s): Hanfang Cai, Chaoqun Zhu, Zhilong Chen, Maimaiti Rexiati, Mingming Sun, Richard J. McCormick, Xianyong Lan, Hong Chen, Wei Guo
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms20215398

Inverse Regulation of Lipocalin-2/24p3 Receptor/SLC22A17 and Lipocalin-2 Expression by Tonicity, NFAT5/TonEBP and Arginine Vasopressin in Mouse Cortical Collecting Duct Cells mCCD(cl.1): Implications for Osmotolerance
Cited by: 9
Author(s): Stephanie Probst, Bettina Scharner, Ruairi McErlean, Wing-Kee Lee, Frank Thévenod
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms20235934

TGFB1-Mediated Gliosis in Multiple Sclerosis Spinal Cords Is Favored by the Regionalized Expression of HOXA5 and the Age-Dependent Decline in Androgen Receptor Ligands
Cited by: 15
Author(s): Serge Nataf, Marine Guillen, Laurent Pays
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms21020530

Components from the Human c-myb Transcriptional Regulation System Reactivate Epigenetically Repressed Transgenes
Cited by: 3
Author(s): Cassandra Barrett, Reilly McCracken, Jacob Elmer, Karmella A. Haynes
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms21082682

Expression of a Constitutively Active Form of Hck in Chondrocytes Activates Wnt and Hedgehog Signaling Pathways, and Induces Chondrocyte Proliferation in Mice
Cited by: 5
Author(s): Viviane K. S. Kawata Matsuura, Chisato Yoshida, Hisato Komori, Chiharu Sakane, Kei Yamana, Qing Jiang, Toshihisa Komori
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms21124349

Estrogen Receptors and Estrogen-Induced Uterine Vasodilation in Pregnancy
Cited by: 39
Author(s): Jin Bai, Qian-Rong Qi, Yan Li, Robert C. Day, Josh Makhoul, Ronald R. Magness, Dong‐bao Chen
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms21176446

Role of the Transcription Factor Yin Yang 1 and Its Selectively Identified Target Survivin in High-Grade B-Cells Non-Hodgkin Lymphomas: Potential Diagnostic and Therapeutic Targets
Cited by: 6
Author(s): Silvia Vivarelli, Luca Falzone, Giovanni Ligresti, Saverio Candido, A Garozzo, Gaetano Magro, Benjamin Bonavida, Massimo Libra
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms21176023

Asymmetric Conservation within Pairs of Co-Occurred Motifs Mediates Weak Direct Binding of Transcription Factors in ChIP-Seq Data
Cited by: 4
Author(s): Victor G. Levitsky, Dmitry Oshchepkov, Elena V. Zemlyanskaya, Т. И. Меркулова
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22010460

STAT3 Is an Upstream Regulator of Granzyme G in the Maternal-To-Zygotic Transition of Mouse Embryos
Cited by: 6
Author(s): Huan Ouyang, Simon Wu, Li Ying Sung, Shiao Hsuan Yang, Shang Hsun Yang, Kowit-Yu Chong, Chuan-Mu Chen
Software Mentions: 1
Published: almost 4 years ago

10.3390/ijms22052492

Genomic Space of MGMT in Human Glioma Revisited: Novel Motifs, Regulatory RNAs, NRF1, 2, and CTCF Involvement in Gene Expression
Cited by: 6
Author(s): Mohammed A. I. Al‐Obaide, Viswanath Arutla, Manny D. Bacolod, Wei Wang, Ruiwen Zhang, Kalkunte S. Srivenugopal
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms22062943

The Impact of Modern Technologies on Molecular Diagnostic Success Rates, with a Focus on Inherited Retinal Dystrophy and Hearing Loss
Cited by: 6
Author(s): Suzanne E. de Bruijn, Zeinab Fadaie, Frans P.M. Cremers, Hannie Kremer, Susanne Roosing
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms22126454

Regulatory SNPs: Altered Transcription Factor Binding Sites Implicated in Complex Traits and Diseases
Cited by: 23
Author(s): Arina O. Degtyareva, E. V. Antontseva, T. I. Merkulova
Software Mentions: 1
Published: over 3 years ago

10.1186/s12974-021-02172-5

miR-19a/b-3p promotes inflammation during cerebral ischemia/reperfusion injury via SIRT1/FoxO3/SPHK1 pathway
Cited by: 37
Author(s): Feng Zhou, Yukai Wang, Chengguo Zhang, Bingyi Wu
Software Mentions: 1
Published: over 3 years ago

10.1186/s12974-019-1421-8

TNF-α/STAT3 pathway epigenetically upregulates Nav1.6 expression in DRG and contributes to neuropathic pain induced by L5-VRT
Cited by: 47
Author(s): Huan‐Huan Ding, Subo Zhang, Yan Lv, Chao Ma, Meng Li, Kuibo Zhang, Xiuxiu Ruan, Jia-You Wei, Wenjun Xin, Shaoling Wu
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.isci.2020.101329

Sox21 Regulates Anapc10 Expression and Determines the Fate of Ectodermal Organ
Cited by: 16
Author(s): Kan Saito, Fréderic Michon, Aya Yamada, Hiroyuki Inuzuka, Satoko Yamaguchi, Emiko Fukumoto, Keigo Yoshizaki, Takashi Nakamura, Makiko Arakaki, Yuta Chiba, Mayuko Ishikawa, Hideyuki Okano, Irma Thesleff, Satoshi Fukumoto
Software Mentions: 1
Published: over 4 years ago

10.1186/s13048-020-00683-y

Bioinformatic analysis reveals MIR502 as a potential tumour suppressor in ovarian cancer
Cited by: 4
Author(s): Li Yan, Qi Wang, Ning Ning, Fanglan Tang, Yan Wang
Software Mentions: 1
Published: over 4 years ago

10.18632/oncotarget.6575

Human telomerase reverse transcriptase (hTERT) promotes gastric cancer invasion through cooperating with c-Myc to upregulate heparanase expression
Cited by: 46
Author(s): Bo Tang, Rui Xie, Yong Qin, Yufeng Xiao, Yong Xin, Lei Zheng, Hui Dong, Shiming Yang
Software Mentions: 1
Published: almost 9 years ago

10.18632/oncotarget.8478

Apoptosis signal-regulating kinase 1 mediates the inhibitory effect of hepatocyte nuclear factor-4α on hepatocellular carcinoma
Cited by: 18
Author(s): Cai‐Feng Jiang, Liangzhi Wen, Chuan Yin, Wenrong Xu, Bin Shi, Xin Zhang, Wei‐Fen Xie
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.8824

Krüppel-like factor 4 promotes human osteosarcoma growth and metastasis via regulating CRYAB expression
Cited by: 29
Author(s): Lu Zhang, Li Zhang, Xin Xia, Sheng‐Wei He, Hongtao He, Wenzhi Zhao
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.9042

Downregulation of miR-199b is associated with distant metastasis in colorectal cancer via activation of SIRT1 and inhibition of CREB/KISS1 signaling
Cited by: 54
Author(s): Zhanlong Shen, Bo Wang, Kewei Jiang, Chun-xiang Ye, Cheng Cheng, Yichao Yan, Jizhun Zhang, Yang Yang, Zhidong Gao, Yingjiang Ye, Shan Wang
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.9930

Reduced CD146 expression promotes tumorigenesis and cancer stemness in colorectal cancer through activating Wnt/β-catenin signaling
Cited by: 36
Author(s): Dan Liŭ, Lixin Du, Dong Chen, Zhongde Ye, Hongxia Duan, Tao Tu, Jing Feng, Yili Yang, Quan Chen, Xiyun Yan
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.11271

HBV suppresses expression of MICA/B on hepatoma cells through up-regulation of transcription factors GATA2 and GATA3 to escape from NK cell surveillance
Cited by: 17
Author(s): Yun Guan, Weiqun Li, Zhaohua Hou, Qiuju Han, Peixiang Lan, Jian Zhang, Zhigang Tian, Cai Zhang
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.10462

Nuclear IKKα mediates microRNA-7/-103/107/21 inductions to downregulate maspin expression in response to HBx overexpression
Cited by: 10
Author(s): Wen Shu Chen, Liang‐Chih Liu, Chia Jui Yen, Yun Ju Chen, Jhen Yu Chen, Chien Yi Ho, Shu Hui Liu, Ching-Chow Chen, Wei-Chien Huang
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.10977

Expression of the p66Shc protein adaptor is regulated by the activator of transcription STAT4 in normal and chronic lymphocytic leukemia B cells
Cited by: 18
Author(s): Francesca Cattaneo, Laura Patrussi, Nagaja Capitani, Federica Frezzato, Mario Milco D’Elios, Livio Trentin, Gianpietro Semenzato, Cosima T. Baldari
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.14168

Androgen receptor transcriptionally regulates semaphorin 3C in a GATA2-dependent manner
Cited by: 15
Author(s): Kevin J. Tam, Kush Dalal, Michael Hsing, Chi Wing Cheng, Shahram Khosravi, Parvin Yenki, Charan Tse, James W. Peacock, Aishwariya Sharma, Yan Ting Chiang, Yuzhuo Wang, Artem Cherkasov, Paul S. Rennie, Martin Gleave, Christopher J. Ong
Software Mentions: 1
Published: almost 8 years ago

10.18632/oncotarget.12626

DNA methylation promotes paired box 2 expression via myeloid zinc finger 1 in endometrial cancer
Cited by: 20
Author(s): Jun Nan, Jieyu Wang, Qing Li, Xiang Tao, Kai‐Kai Chang, Keqin Hua, Yu Shih Yang, Kwong-Kwok Wong, Weiwei Feng
Software Mentions: 1
Published: about 8 years ago

10.18632/oncotarget.12938

CREB1 directly activates the transcription of ribonucleotide reductase small subunit M2 and promotes the aggressiveness of human colorectal cancer
Cited by: 24
Author(s): Zejun Fang, Aifen Lin, Jiaoe Chen, Xiaomin Zhang, Hong Liu, Hongzhang Li, Yifei Hu, Xia Zhang, Jian Gang Zhang, Lanlan Qiu, Lingming Mei, Jimin Shao, Xiang Chen
Software Mentions: 1
Published: about 8 years ago

10.18632/oncotarget.15891

High Myc expression and transcription activity underlies intra-tumoral heterogeneity in triple-negative breast cancer
Cited by: 21
Author(s): Nidhi Gupta, Karen Jung, Chenming Wu, Abdulraheem Alshareef, Hind Alqahtani, Sambasivarao Damaraju, John R. Mackey, Sunita Ghosh, Siham Sabri, Bassam Abdulkarim, Gilbert Bigras, Raymond Lai
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.16248

The miR-124-p63 feedback loop modulates colorectal cancer growth
Cited by: 19
Author(s): Kuijie Liu, Hongliang Yao, Sanlin Lei, Xiong Li, Haiyun Qi, Qing Ke, Jiqiang Liu, Peng Wang, Hua Zhao
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.16742

MicroRNA-22 suppresses the growth, migration and invasion of colorectal cancer cells through a Sp1 negative feedback loop
Cited by: 37
Author(s): Shu-Sen Xia, Guangjun Zhang, Zuo-Liang Liu, Hongpeng Tian, Yi He, Chunyan Meng, Lifa Li, Ziwei Wang, Tong Zhou
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.18387

CXCL13 is androgen-responsive and involved in androgen induced prostate cancer cell migration and invasion
Cited by: 22
Author(s): Lixia Fan, Qingyi Zhu, Li Liu, Chengwei Zhu, Haojie Huang, Shan Lu, Ping Liu
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.20204

Comprehensive bioinformatics analysis of the characterization and determination underlying mechanisms of over-expression and co-expression of genes residing on 20q in colorectal cancer
Cited by: 9
Author(s): Daojiang Li, Changwei Lin, Chen Miao, Nanpeng Li, Yuheng Du, Chen Su, Chunxing Yang, Ni Gong, Hao Wu, Runliu Wu, Arad Jain, Yi Zhang, Xiaorong Li
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.20244

CD163 as a novel target gene of STAT3 is a potential therapeutic target for gastric cancer
Cited by: 32
Author(s): Zhenguo Cheng, Danhua Zhang, Baocheng Gong, Pengliang Wang, Funan Liu
Software Mentions: 1
Published: over 7 years ago

10.18632/oncotarget.22122

Decreased expression of interferon-induced protein 2 (IFIT2) by Wnt/β-catenin signaling confers anti-apoptotic properties to colorectal cancer cells
Cited by: 16
Author(s): Tomoyuki Ohsugi, Kiyoshi Yamaguchi, Ce Zhu, Tsuneo Ikenoue, Yoichi Furukawa
Software Mentions: 1
Published: about 7 years ago

10.18632/oncotarget.22948

ICAM-1 regulates macrophage polarization by suppressing MCP-1 expression via miR-124 upregulation
Cited by: 49
Author(s): Wei Gu, Lun Yao, Lexing Li, Jianping Zhang, Aaron T. Place, Richard D. Minshall, Guoquan Liu
Software Mentions: 1
Published: almost 7 years ago

10.18632/oncotarget.22973

MAGE-A11 is activated through TFCP2/ZEB1 binding sites de-methylation as well as histone modification and facilitates ESCC tumor growth
Cited by: 16
Author(s): Shina Liu, Fei Liu, Weina Huang, Lina Gu, Lingjiao Meng, Yingchao Ju, Yunyan Wu, Juan Li, Lihua Liu, Meixiang Sang
Software Mentions: 1
Published: almost 7 years ago

10.18632/oncotarget.27232

Two novel ligand-independent variants of the VEGFR-1 receptor are expressed in human testis and spermatozoa, one of them with the ability to activate SRC proto-oncogene tyrosine kinases
Cited by: 0
Author(s): Belén Álvarez-Palomo, Carme Barrot-Feixat, Helena Sarret, Jordi Vilaseca i Requena, Montserrat Pau, José M. Vidal-Taboada, Rafael Oliva, Josep-Lluis Ballesca, Michael J. Edel, Jovita Mezquita‐Pla
Software Mentions: 1
Published: about 5 years ago

10.1098/rsob.150079

Evolution of lineage-specific functions in ancient <i>cis</i> -regulatory modules
Cited by: 6
Author(s): Stefan Pauls, Debbie K. Goode, Libero Petrone, Paola Oliveri, Greg Elgar
Software Mentions: 1
Published: about 9 years ago

10.1098/rsob.180043

Loss of <i>runx1</i> function results in B cell immunodeficiency but not T cell in adult zebrafish
Cited by: 11
Author(s): Yali Chi, Zhibin Huang, Qi Chen, Xiaojie Xiong, Kemin Chen, Jin Xu, Yiyue Zhang, Wenqing Zhang
Software Mentions: 1
Published: over 6 years ago

10.1098/rsob.200395

Integrative omics identification, evolutionary and structural analysis of low affinity nitrate transporters in diatoms, diNPFs
Cited by: 5
Author(s): Anna Santin, Luigi Caputi, Antonella Longo, Maurizio Chiurazzi, Maurizio Ribera d’Alcalà, Monia Teresa Russo, Maria Immacolata Ferrante, Alessandra Rogato
Software Mentions: 1
Published: over 3 years ago

10.1186/s12967-017-1308-3

A Yin-Yang 1/miR-30a regulatory circuit modulates autophagy in pancreatic cancer cells
Cited by: 29
Author(s): Chuang Yang, Jingjing Zhang, Yunpeng Peng, Yaping Zhu, Lingdi Yin, Jishu Wei, Wentao Gao, Kuirong Jiang, Yi Miao
Software Mentions: 1
Published: about 7 years ago

10.1155/2013/737591

NRF2-ome: An Integrated Web Resource to Discover Protein Interaction and Regulatory Networks of NRF2
Cited by: 38
Author(s): Dénes Türei, Diána Papp, Dávid Fazekas, László Földvári-Nagy, Dezső Módos, Katalin Lenti, Péter Csermely, Tamás Korcsmáros
Software Mentions: 1
Published: almost 12 years ago

10.1155/2019/8189079

lncRNA AK054386 Functions as a ceRNA to Sequester miR-199 and Induce Sustained Endoplasmic Reticulum Stress in Hepatic Reperfusion Injury
Cited by: 14
Author(s): Binghua Dai, Liang Qiao, Mingke Zhang, Lipeng Cheng, Ling Zhang, Li Geng, Chenxi Shi, Minfeng Zhang, Chengjun Sui, Weifeng Shi, Ying Sun, Qian Chen, Hongyan Dong, Yue Wang, Jiamei Yang
Software Mentions: 1
Published: about 5 years ago

10.1007/s13205-011-0040-6

A niched Pareto genetic algorithm for finding variable length regulatory motifs in DNA sequences
Cited by: 0
Author(s): Shripal Vijayvargiya, Pratyoosh Shukla
Software Mentions: 1
Published: almost 13 years ago

10.3390/nu12123765

A Comparison of Gene Expression Changes in the Blood of Individuals Consuming Diets Supplemented with Olives, Nuts or Long-Chain Omega-3 Fatty Acids
Cited by: 10
Author(s): Virginie Bottero, Judith A. Potashkin
Software Mentions: 1
Published: almost 4 years ago

10.1007/s13205-011-0006-8

Cataloguing functionally relevant polymorphisms in gene DNA ligase I: a computational approach
Cited by: 5
Author(s): Abhishek A. Singh, Dakshinamurthy Sivakumar, Pallavi Somvanshi
Software Mentions: 1
Published: over 13 years ago

10.1186/s40478-020-01022-4

New somatic TERT promoter variants enhance the Telomerase activity in Glioblastoma
Cited by: 11
Author(s): Tiziana Pierini, Carlotta Nardelli, Anair Graciela Lema Fernandez, Valentina Pierini, Fabrizia Pellanera, Valeria Nofrini, Paolo Gorello, Martina Moretti, Silvia Arniani, Giovanni Roti, Paolo Giovenali, Marco Lupattelli, Giulio Metro, Carmen Molica, Corrado Castrioto, Rodolfo Corinaldesi, Maria Elena Laurenti, Stefano Ascani, Cristina Mecucci, Roberta La Starza
Software Mentions: 1
Published: over 4 years ago

10.1002/advs.202004515

Downregulation of a Dorsal Root Ganglion‐Specifically Enriched Long Noncoding RNA is Required for Neuropathic Pain by Negatively Regulating RALY‐Triggered Ehmt2 Expression
Cited by: 30
Author(s): Zengxiang Pan, Shouying Du, Kun Wang, Xinying Guo, Qingxiang Mao, Xiaozhou Feng, Lanqing Huang, Shaogen Wu, Baohua Hou, Yun‐Juan Chang, Tong Liu, Tong Chen, Hong Li, Thomas Bachmann, Alex Bekker, Huijuan Hu, Yuan‐Xiang Tao
Software Mentions: 1
Published: over 3 years ago

10.18632/aging.103015

USF1-mediated upregulation of lncRNA GAS6-AS2 facilitates osteosarcoma progression through miR-934/BCAT1 axis
Cited by: 11
Author(s): Guojun Wei, Tianwei Zhang, Zongguang Li, Naichun Yu, Xiang Xue, Daguo Zhou, Yongjie Chen, Linlin Zhang, Xiaoli Yao, Guangrong Ji
Software Mentions: 1
Published: over 4 years ago

10.18632/aging.101383

Ultraviolet A irradiation induces senescence in human dermal fibroblasts by down-regulating DNMT1 via ZEB1
Cited by: 20
Author(s): Yuxin Yi, Hongfu Xie, Xiao Xiao, Ben Wang, Rui Du, Yingzi Liu, Zibo Li, Jun Wang, Lun‐Quan Sun, Zhili Deng, Ji Li
Software Mentions: 1
Published: almost 7 years ago

10.18632/aging.104073

The long noncoding RNA HCG18 participates in PM2.5-mediated vascular endothelial barrier dysfunction
Cited by: 13
Author(s): Shiwen Wang, Yuwan Lin, Yue Zhong, Maozhou Zhao, Weirong Yao, Xiaohui Ren, Qin Wang, Xiaolan Guo, Qianqian Zhang, Jianwei Dai
Software Mentions: 1
Published: about 4 years ago

10.18632/aging.202204

IRF-1 contributes to the pathological phenotype of VSMCs during atherogenesis by increasing CCL19 transcription
Cited by: 5
Author(s): Yongbin Shen, Zhongyi Sun, Shuran Mao, Yingnan Zhang, Weiliang Jiang, Haitao Wang
Software Mentions: 1
Published: about 4 years ago

10.18632/aging.102991

PCNA-associated factor KIAA0101 transcriptionally induced by ELK1 controls cell proliferation and apoptosis in nasopharyngeal carcinoma: an integrated bioinformatics and experimental study
Cited by: 6
Author(s): Zhao Hu, Miaosheng Chen, Jie Wang, Gang Cao, Wei Chen, Jing Xu
Software Mentions: 1
Published: over 4 years ago

10.18632/aging.101875

Endothelial cells secreted endothelin-1 augments diabetic nephropathy via inducing extracellular matrix accumulation of mesangial cells in ETBR-/- mice
Cited by: 16
Author(s): Honghong Zou, Li Wang, Xiaoxu Zheng, Gaosi Xu, Yue Shen
Software Mentions: 1
Published: over 5 years ago

10.18632/aging.103660

SP1-induced HOXD-AS1 promotes malignant progression of cholangiocarcinoma by regulating miR-520c-3p/MYCN
Cited by: 14
Author(s): Jinglin Li, Xingming Jiang, Zhenglong Li, Liyi Huang, Daolin Ji, Liang Yu, Yi Zhou, Yunfu Cui
Software Mentions: 1
Published: about 4 years ago

10.18632/aging.203024

TCF-3-mediated transcription of lncRNA HNF1A-AS1 targeting oncostatin M expression inhibits epithelial-mesenchymal transition via TGFβ signaling in gastroenteropancreatic neuroendocrine neoplasms
Cited by: 6
Author(s): Jingwen Xue, Jianan Bai, Qin Long, Yue Wei, Jialing Pan, Xin Li, Qiyun Tang
Software Mentions: 1
Published: over 3 years ago

10.18632/aging.202401

Lumican inhibits immune escape and carcinogenic pathways in colorectal adenocarcinoma
Cited by: 11
Author(s): Yiqing Zang, Qiuping Dong, Yi Lü, Kaiti Dong, Rong Wang, Zheng Liang
Software Mentions: 1
Published: almost 4 years ago

10.18632/aging.103824

HOXC10 promotes tumour metastasis by regulating the EMT-related gene Slug in ovarian cancer
Cited by: 15
Author(s): Yuan Peng, Yuanyuan Li, Yimin Li, Anqi Wu, Lili Fan, Wenli Huang, Chunyan Fu, Zhili Deng, Kuansong Wang, Yu Zhang, Guang Shu, Gang Yin
Software Mentions: 1
Published: about 4 years ago

10.18632/aging.102938

STAT5A induced LINC01198 promotes proliferation of glioma cells through stabilizing DGCR8
Cited by: 9
Author(s): Cheng Tan, Yimeng Dai, Xiaoyang Liu, Guifang Zhao, Weiyao Wang, Jia Li, Ling Qi
Software Mentions: 1
Published: over 4 years ago

10.18632/aging.203093

Calycosin inhibits breast cancer cell migration and invasion by suppressing EMT via BATF/TGF-β1
Cited by: 20
Author(s): Zhenxia Zhang, Min Lin, Junli Wang, Fenglian Yang, Yang Peng, Yaqun Liu, Zikai Chen, Yuzhong Zheng
Software Mentions: 1
Published: over 3 years ago

10.18632/aging.202770

WTAP promotes myocardial ischemia/reperfusion injury by increasing endoplasmic reticulum stress via regulating m6A modification of ATF4 mRNA
Cited by: 45
Author(s): Jiayi Wang, Jiehan Zhang, Yan Ma, Yuxiao Zeng, Cheng Wei Lu, Fenghua Yang, Nianxin Jiang, Xuan Zhang, Yuhua Wang, You‐Ping Xu, Hanjing Hou, Shengyang Jiang, Shaowei Zhuang
Software Mentions: 1
Published: over 3 years ago

10.18632/aging.102296

The interaction between STAT3 and nAChRα1 interferes with nicotine-induced atherosclerosis via Akt/mTOR signaling cascade
Cited by: 14
Author(s): Shengwen Xu, Huaner Ni, Hangwei Chen, Qiuyan Dai
Software Mentions: 1
Published: about 5 years ago

10.1111/acel.12360

Nuclear respiratory factor 2 induces <scp>SIRT</scp> 3 expression
Cited by: 63
Author(s): F. Kyle Satterstrom, William R. Swindell, Gaëlle Laurent, Sejal Vyas, Martha L. Bulyk, Marcia C. Haigis
Software Mentions: 1
Published: over 9 years ago

10.1111/acel.13107

Muscle atrophy‐related myotube‐derived exosomal microRNA in neuronal dysfunction: Targeting both coding and long noncoding RNAs
Cited by: 17
Author(s): Chia Pei Yang, Wan Shan Yang, Yu Hui Wong, Kai Hsuan Wang, Yuan Teng, Ming Chen, Ko Hsun Liao, Fang Nian, Chuan Chuan Chao, Jo Ting Tsai, Wei Lun Hwang, Ming Lin, Tsai Yu Tzeng, Pei Ning Wang, Mel Campbell, Liang Kung Chen, Ting Fen Tsai, Pei Ching Chang, Hsing Jien Kung
Software Mentions: 1
Published: over 4 years ago

10.1111/acel.12990

Forkhead box O3 protects the heart against paraquat‐induced aging‐associated phenotypes by upregulating the expression of antioxidant enzymes
Cited by: 34
Author(s): Zao Shang Chang, Jing Xia, Hai Yan Wu, Wen Tao Peng, Fu Qing Jiang, Jing Li, Chi Qian Liang, Hui Zhao, Kyu Sang Park, Guo Hua Song, Soo Ki Kim, Ruijin Huang, Li Zheng, Dongqing Cai, Xu Qi
Software Mentions: 1
Published: over 5 years ago

10.1186/1748-7188-8-23

Jaccard index based similarity measure to compare transcription factor binding site models
Cited by: 52
Author(s): Ilya E. Vorontsov, Ivan V. Kulakovskiy, Vsevolod J. Makeev
Software Mentions: 1
Published: about 11 years ago

10.5713/ajas.19.1000

Regulation of chicken vanin1 gene expression by peroxisome proliferators activated receptor α and miRNA-181a-5p
Cited by: 0
Author(s): Zhongliang Wang, Jianfeng Yu, Nan Hua, Jie Li, Lei Xu, Wen Yao, Gu Z
Software Mentions: 1
Published: almost 4 years ago

10.3390/ani11020292

Long Noncoding RNA LncPGCR Mediated by TCF7L2 Regulates Primordial Germ Cell Formation in Chickens
Cited by: 4
Author(s): Jingyi Jiang, Chen Chen, Shaoze Cheng, Xia Yuan, Jing Jin, Chen Zhang, Xin Sun, Jiuzhou Song, Qisheng Zuo, Yani Zhang, Guohong Chen
Software Mentions: 1
Published: almost 4 years ago

Projects: cran: JASPAR

Papers Mentioning JASPAR 1,283