Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: HTSCluster
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/HTSCluster
Clustering High-Throughput Transcriptome Sequencing (HTS) Data
9 versions
Latest release: about 1 year ago
448 downloads last month
Papers Mentioning HTSCluster 7
10.1371/journal.pone.0236429
pH effect on strain-specific transcriptomes of the take-all fungusCited by: 1
Author(s): Kévin Gazengel, Lionel Lebreton, Nicolas Lapalu, Joëlle Amselem, Anne‐Yvonne Guillerm‐Erckelboudt, Denis Tagu, Stéphanie Daval
Software Mentions: 6
Published: over 4 years ago
10.1186/s12870-017-1037-z
Proanthocyanidin accumulation and transcriptional responses in the seed coat of cranberry beans (Phaseolus vulgaris L.) with different susceptibility to postharvest darkeningCited by: 30
Author(s): José A. Freixas Coutin, Seth Munholland, Anjali Silva, Sanjeena Subedi, Lewis Lukens, William L. Crosby, K. Peter Pauls, Gale G. Bozzo
Software Mentions: 4
Published: over 7 years ago
10.1186/s12859-019-2916-0
A multivariate Poisson-log normal mixture model for clustering transcriptome sequencing dataCited by: 26
Author(s): Anjali Silva, Steven J. Rothstein, Paul D. McNicholas, Sanjeena Subedi
Software Mentions: 4
Published: over 5 years ago
10.1038/s41375-021-01221-5
Temporal multiomic modeling reveals a B-cell receptor proliferative program in chronic lymphocytic leukemiaCited by: 5
Author(s): Cédric Schleiss, Raphaël Carapito, Luc‐Matthieu Fornecker, Leslie Muller, Nicodème Paul, Ouria Tahar, Angélique Pichot, Manuela Tavian, Alina Nicolae, Laurent Miguet, Laurent Mauvieux, Raoul Herbrecht, Sarah Cianférani, Jean–Noël Freund, Myriam Maumy-Bertrand, Seiamak Bahram, Frédèric Bertrand, Laurent Vallat
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pgen.1007180
Dynamic genome wide expression profiling of Drosophila head development reveals a novel role of Hunchback in retinal glia cell development and blood-brain barrier integrityCited by: 11
Author(s): Montserrat Torres-Oliva, Júlia Schneider, Gordon Wiegleb, Felix Kaufholz, Nico Posnien
Software Mentions: 3
Published: almost 7 years ago
10.1186/s12864-017-3623-8
Comparative transcriptome analyses of flower development in four species of Achimenes (Gesneriaceae)Cited by: 28
Author(s): Wade R. Roberts, Eric H. Roalson
Software Mentions: 3
Published: over 7 years ago
10.1371/journal.pntd.0005067
Under-Expression of Chemosensory Genes in Domiciliary Bugs of the Chagas Disease Vector Triatoma brasiliensisCited by: 22
Author(s): Axelle Marchant, Florence Mougel, Emmanuelle Jacquin‐Joly, Jane Costa, Carlos Eduardo Almeida, Myriam Harry
Software Mentions: 2
Published: about 8 years ago