Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0236429

https://doi.org/10.1371/journal.pone.0236429

pH effect on strain-specific transcriptomes of the take-all fungus

Cited by: 1
Author(s): Kévin Gazengel, Lionel Lebreton, Nicolas Lapalu, Joëlle Amselem, Anne‐Yvonne Guillerm‐Erckelboudt, Denis Tagu, Stéphanie Daval
Published: over 4 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: HTSCluster
Clustering High-Throughput Transcriptome Sequencing (HTS) Data
Papers that mentioned: 7
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
pypi: Sickle
A lightweight OAI client library for Python
Papers that mentioned: 740