Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: quantro
https://packages.ecosyste.ms/registries/bioconductor.org/packages/quantro
A test for when to use quantile normalization
1 version
Latest release: about 1 year ago
3 dependent packages
28,300 downloads total
Papers Mentioning quantro 6
10.15252/emmm.202012640
Mithramycin induces promoter reprogramming and differentiation of rhabdoid tumorCited by: 7
Author(s): Maggie H. Chassé, Benjamin K. Johnson, Elissa A. Boguslawski, Katie M. Sorensen, Jessica E Rosien, Min H. Kang, C. Patrick Reynolds, Lyong Heo, Zachary Madaj, Ian Beddows, Gabrielle E. Foxa, Susan M. Kitchen-Goosen, Bart O. Williams, Timothy J. Triche, Patrick J. Grohar
Software Mentions: 18
Published: about 4 years ago
10.3390/ijms22062790
Differential Methylation in the GSTT1 Regulatory Region in Sudden Unexplained Death and Sudden Unexpected Death in EpilepsyCited by: 4
Author(s): Steffan Noe Christiansen, Stine Jacobsen, Jeppe Dyrberg Andersen, Marie-Louise Kampmann, Linea C Trudsø, Karsten Olsen, Jacob Tfelt-Hansen, Jytte Banner, Niels Morling
Software Mentions: 13
Published: almost 4 years ago
10.12688/f1000research.8839.3
A cross-package Bioconductor workflow for analysing methylation array dataCited by: 80
Author(s): Jovana Maksimovic, Belinda Phipson, Alicia Oshlack
Software Mentions: 12
Published: over 7 years ago
10.7717/peerj.1621
Cross-platform normalization of microarray and RNA-seq data for machine learning applicationsCited by: 71
Author(s): Jeffrey Thompson, Jie Tan, Casey S. Greene
Software Mentions: 7
Published: almost 9 years ago
10.3389/fonc.2021.729219
A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial CancerCited by: 5
Author(s): Diocésio Alves Pinto de Andrade, Luciane Sussuchi da Silva, Ana Carolina Laus, Marcos Alves de Lima, Gustavo Nóriz Berardinelli, Vinícius Duval da Silva, Graziela de Macêdo Matsushita, Murilo Bonatelli, Aline Larissa Virginio da Silva, Adriane Feijó Evangelista, Jesus Paula Carvalho, Rui Manuel Reis, Ricardo dos Reis
Software Mentions: 5
Published: over 3 years ago
10.1186/s13059-015-0679-0
quantro: a data-driven approach to guide the choice of an appropriate normalization methodCited by: 70
Author(s): Stephanie C. Hicks, Rafael A. Irizarry
Software Mentions: 2
Published: over 9 years ago