Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: miRBaseConverter
https://packages.ecosyste.ms/registries/bioconductor.org/packages/miRBaseConverter
A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions
1 version
Latest release: 10 months ago
2 dependent packages
11,559 downloads total
Papers Mentioning miRBaseConverter 10
10.1038/s41598-021-88698-3
In-depth transcriptomic analysis of human retina reveals molecular mechanisms underlying diabetic retinopathyCited by: 23
Author(s): Kolja Becker, H. Klein, Eric J. Simon, Coralie Viollet, Christian Haslinger, Germán Leparc, Christian Schultheis, Victor Chong, Markus H. Kuehn, Francesc Fernández-Albert, Remko A. Bakker
Software Mentions: 11
Published: about 3 years ago
10.15252/emmm.201911900
Epigenetic gene expression links heart failure to memory impairmentCited by: 13
Author(s): Rezaul Islam, Dawid Lbik, M. Sadman Sakib, Raoul Maximilian Hofmann, Tea Berulava, Martí Jiménez Mausbach, Julia Cha, Maria Amélia Azevêdo Goldberg, Elerdashvili Vakhtang, Christian Schiffmann, Anke Zieseniß, Dörthe M. Katschinski, Farahnaz Sananbenesi, Karl Toischer, André Fischer
Software Mentions: 11
Published: over 3 years ago
10.3390/diagnostics10090617
microRNA Expression Profile in Single Hormone Receptor-Positive Breast Cancers Is Mainly Dependent on HER2 Status—A Pilot StudyCited by: 6
Author(s): Michał Kunc, Marta Popęda, Magdalena Niemira, Anna Szałkowska, Michał Bieńkowski, Rafał Pęksa, Aleksandra Łacko, Barbara Radecka, Marcin Braun, Joanna Pikiel, Maria Litwiniuk, Katarzyna Pogoda, Ewa Iżycka‐Świeszewska, Adam Krętowski, Anna Żaczek, Wojciech Biernat, Elżbieta Senkus
Software Mentions: 5
Published: almost 4 years ago
10.1371/journal.pone.0249424
miRGTF-net: Integrative miRNA-gene-TF network analysis reveals key drivers of breast cancer recurrenceCited by: 15
Author(s): Stepan Nersisyan, A. V. Galatenko, Vladimir Galatenko, M. Yu. Shkurnikov, Alexander G. Tonevitsky
Software Mentions: 4
Published: over 3 years ago
10.1371/journal.pone.0253009
miR-361-5p as a promising qRT-PCR internal control for tumor and normal breast tissuesCited by: 4
Author(s): Sogol Ghanbari, Adel Salimi, Saeid Rahmani, Nahid Nafissi, Ali Sharifi‐Zarchi, Seyed Javad Mowla
Software Mentions: 4
Published: about 3 years ago
10.1186/s12859-018-2531-5
miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBaseCited by: 52
Author(s): Taosheng Xu, Ning Su, Lin Liu, Junpeng Zhang, Hongqiang Wang, Weijia Zhang, Jie Gui, Ke Yu, Jiuyong Li, Thuc Duy Le
Software Mentions: 3
Published: over 5 years ago
10.3390/biom10111576
HumiR: Web Services, Tools and Databases for Exploring Human microRNA DataCited by: 5
Author(s): Jeffrey Solomon, Fabian Kern, Tobias Fehlmann, Eckart Meese, Andreas Keller
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pcbi.1008608
miRNA normalization enables joint analysis of several datasets to increase sensitivity and to reveal novel miRNAs differentially expressed in breast cancerCited by: 2
Author(s): Shay Ben-Elazar, Miriam Ragle Aure, Kristín Jónsdóttir, Suvi‐Katri Leivonen, Vessela N. Kristensen, E. A. M. Janssen, Kristine Kleivi Sahlberg, Ole Christian Lingjærde, Zohar Yakhini
Software Mentions: 3
Published: over 3 years ago
10.3389/fgene.2020.562971
ASDmiR: A Stepwise Method to Uncover miRNA Regulation Related to Autism Spectrum DisorderCited by: 5
Author(s): Chenchen Xiong, Shaoping Sun, Weili Jiang, Junpeng Zhang
Software Mentions: 3
Published: almost 4 years ago
10.1016/j.csbj.2021.03.035
Genome-wide analysis of primary microRNA expression using H3K36me3 ChIP-seq dataCited by: 1
Author(s): Tanja Turunen, Ana Hernández de Sande, Petri Pölönen, Merja Heinäniemi
Software Mentions: 1
Published: over 3 years ago