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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Projects: bioconductor: beachmat

https://packages.ecosyste.ms/registries/bioconductor.org/packages/beachmat

Compiling Bioconductor to Handle Each Matrix Type
2 versions
Latest release: almost 2 years ago
14 dependent packages
734,034 downloads total

Enhanced Analysis
Educational Contributors: [email protected] [email protected] [email protected]
Repository Activity:
Repository Owner: tatami libraries and extensions (organization)
A variety of wild and wacky matrix representations in C++
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +60 Educational commit emails
    3 contributors with educational email addresses
Penalties:
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning beachmat 3

10.1371/journal.pcbi.1008625
mbkmeans: Fast clustering for single cell data using mini-batch k-means
Cited by: 27
Author(s): Stephanie C. Hicks, Ruoxi Liu, Yuwei Ni, Elizabeth Purdom, Davide Risso
Software Mentions: 15
Published: over 4 years ago
10.1371/journal.pcbi.1006135
beachmat: A Bioconductor C++ API for accessing high-throughput biological data from a variety of R matrix types
Cited by: 13
Author(s): Aaron T. L. Lun, Hervé Pagès, Mike L. Smith
Software Mentions: 10
Published: about 7 years ago
10.1093/bioinformatics/btaa1009
glmGamPoi: fitting Gamma-Poisson generalized linear models on single cell count data
Cited by: 89
Author(s): Constantin Ahlmann-Eltze, Wolfgang Huber
Software Mentions: 5
Published: over 4 years ago