Projects: bioconductor: PAST

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAST

Pathway Association Study Tool (PAST)
1 version
Latest release: about 3 years ago
4,613 downloads total

Enhanced Analysis
Repository Activity:
Repository Owner: IGBB (organization)
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses

Very Likely Science (100)

Papers Mentioning PAST 2,336

10.3389/fmicb.2018.02882
Low-Abundance Members of the Firmicutes Facilitate Bioremediation of Soil Impacted by Highly Acidic Mine Drainage From the Malanjkhand Copper Project, India
Cited by: 67
Author(s): Abhishek Gupta, Avishek Dutta, Jayeeta Sarkar, M. K. Panigrahi, Pinaki Sar
Software Mentions: 2
Published: almost 8 years ago
10.3390/microorganisms8010058
A Deeper Look into the Biodiversity of the Extremely Acidic Copahue volcano-Río Agrio System in Neuquén, Argentina
Cited by: 9
Author(s): Germán López Bedogni, Francisco Luis Massello, Alejandra Giaveno, Edgardo R. Donati, María Sofía Urbieta
Software Mentions: 2
Published: almost 7 years ago
10.1007/s13205-014-0238-5
Diversified diazotrophs associated with the rhizosphere of Western Indian Himalayan native red kidney beans (Phaseolus vulgaris L.)
Cited by: 24
Author(s): Deep Chandra Suyal, Amit Yadav, Yogesh S. Shouche
Software Mentions: 2
Published: over 12 years ago
10.3390/insects12040306
Effects of Land-Use Change on the Community Structure of the Dung Beetle (Scarabaeinae) in an Altered Ecosystem in Southern Ecuador
Cited by: 5
Author(s): Vinicio Carrión-Paladines, Andreas Fries, Andrés Izquierdo Muñoz, Eddy Castillo, Roberto García‐Ruiz, Diego Marín‐Armijos
Software Mentions: 2
Published: over 5 years ago
10.3390/insects12040341
Wing Morphometrics of Aedes Mosquitoes from North-Eastern France
Cited by: 8
Author(s): Jean-Philippe Martinet, Hubert Ferté, Pacôme Sientzoff, Eva Krupa, Bruno Mathieu, Jérôme Depaquit
Software Mentions: 2
Published: over 5 years ago
10.1186/s40104-015-0054-8
Fecal microbiome of growing pigs fed a cereal based diet including chicory (Cichorium intybus L.) or ribwort (Plantago lanceolata L.) forage
Cited by: 13
Author(s): Johan Dicksved, Janet Jansson, Jan Erik Lindberg
Software Mentions: 2
Published: almost 11 years ago
10.1111/1365-2664.12860
Sweat bees on hot chillies: provision of pollination services by native bees in traditional slash‐and‐burn agriculture in the Yucatán Peninsula of tropical Mexico
Cited by: 36
Author(s): Patricia Landaverde-González, José Javier G. Quezada–Eúan, Panagiotis Theodorou, Tomás E. Murray, Martin Husemann, Ricardo Ayala, Humberto Moo-Valle, Rémy Vandame, Robert J. Paxton
Software Mentions: 2
Published: over 9 years ago
10.3389/fmicb.2019.01937
Root-Associated Microbial Communities of Abies nordmanniana: Insights Into Interactions of Microbial Communities With Antioxidative Enzymes and Plant Growth
Cited by: 16
Author(s): Adriana M. García-Lemos, Dominik K. Großkinsky, Michaela Schiller Stokholm, Ole Lund, Mette Haubjerg Nicolaisen, Thomas Roitsch, Bjarke Veierskov, Ole Nybroe
Software Mentions: 2
Published: about 7 years ago
10.3389/fmicb.2019.02365
Temporal Dynamics of the Soil Metabolome and Microbiome During Simulated Anaerobic Soil Disinfestation
Cited by: 44
Author(s): Shashika S. Hewavitharana, Emmi Klarer, Andrew J. Reed, Rachel Leisso, Brenton C. Poirier, Loren Honaas, David R. Rudell, Mark Mazzola
Software Mentions: 2
Published: about 7 years ago
10.3389/fmicb.2016.00752
Snapshot of a Bacterial Microbiome Shift during the Early Symptoms of a Massive Sponge Die-Off in the Western Mediterranean
Cited by: 36
Author(s): Andrea Blanquer, María Jesús Uriz, Emma Cebrián, Pierre E. Galand
Software Mentions: 2
Published: over 10 years ago
10.3389/fmicb.2019.02252
Resistance Breeding of Common Bean Shapes the Physiology of the Rhizosphere Microbiome
Cited by: 34
Author(s): Lucas William Mendes, Maria Luíza Morais Barreto de Chaves, Mariley de Cássia da Fonseca, Rodrigo Mendes, Jos M. Raaijmakers, Siu Mui Tsai
Software Mentions: 2
Published: about 7 years ago
10.3389/fmicb.2018.00857
Rhizosphere Protists Change Metabolite Profiles in Zea mays
Cited by: 19
Author(s): Anke Kuppardt, Thomas Fester, Claus Härtig, Antonis Chatzinotas
Software Mentions: 2
Published: over 8 years ago
10.1186/s12889-018-6329-1
Criterion validity and test-retest reliability of SED-GIH, a single item question for assessment of daily sitting time
Cited by: 13
Author(s): Kristina Larsson, Lena Kallings, Örjan Ekblom, Victoria Blom, Eva Andersson, Maria Ekblom
Software Mentions: 2
Published: almost 8 years ago
10.3389/fmicb.2018.00279
Cultivation-Independent and Cultivation-Dependent Analysis of Microbes in the Shallow-Sea Hydrothermal System Off Kueishantao Island, Taiwan: Unmasking Heterotrophic Bacterial Diversity and Functional Capacity
Cited by: 23
Author(s): Kai Tang, Yao Zhang, Dan Lin, Han Yu, Chen‐Tung Arthur Chen, Deli Wang, Yu‐Shih Lin, Jia Sun, Qiang Zheng, Nianzhi Jiao
Software Mentions: 2
Published: over 8 years ago
10.3389/fmicb.2018.01796
Biases in Prokaryotic Community Amplicon Sequencing Affected by DNA Extraction Methods in Both Saline and Non-saline Soil
Cited by: 12
Author(s): Kehui Xie, Yong Deng, Xuze Zhang, Xueting Wang, Guangbo Kang, Liang Bai, He Huang
Software Mentions: 2
Published: about 8 years ago
10.3390/molecules26092825
Quality Evaluation of Light- and Dark-Colored Hungarian Honeys, Focusing on Botanical Origin, Antioxidant Capacity and Mineral Content
Cited by: 19
Author(s): Alexandra Bodó, Lilla Radványi, Tamás Kőszegi, Rita Csepregi, Dávid U. Nagy, Ágnes Farkas, Marianna Kocsis
Software Mentions: 2
Published: over 5 years ago
10.1002/prca.201900058
Dysbiosis of the Oral Ecosystem in Severe Congenital Neutropenia Patients
Cited by: 5
Author(s): Egija Zaura, Bernd W. Brandt, Mark J. Buijs, Gülnur Emingil, Merve Ergüz, Deniz Yılmaz Karapınar, Burç Pekpinarli, Kai Bao, Georgios N. Belibasakis, Nagihan Bostancı
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2018.02903
Water Quality and Total Microbial Load: A Double-Threshold Identification Procedure Intended for Space Applications
Cited by: 6
Author(s): Stefano Amalfitano, Caterina Levantesi, Laurent Garrelly, D. Giacosa, Francesca Bersani, Simona Rossetti
Software Mentions: 2
Published: almost 8 years ago
10.3389/fmicb.2016.01782
Distinct Factors Shape Aquatic and Sedimentary Microbial Community Structures in the Lakes of Western China
Cited by: 47
Author(s): Jian Yang, Hongchen Jiang, Geng Wu, Wen Li, Guojing Zhang
Software Mentions: 2
Published: almost 10 years ago
10.1098/rsos.210529
Confirmed archaeological evidence of water deer in Vietnam: relics of the Pleistocene or a shifting baseline?
Cited by: 3
Author(s): Christopher Stimpson, Shawn O’Donnell, Nguyễn Thị Mai Hương, Rachael Holmes, Benjamin Utting, Thorsten Kahlert, Ryan Rabett
Software Mentions: 2
Published: over 5 years ago
10.1186/s40168-020-00810-3
Lung function and microbiota diversity in cystic fibrosis
Cited by: 115
Author(s): Leah Cuthbertson, Alan W. Walker, Anna Oliver, Geraint B. Rogers, Damian W. Rivett, Thomas H. Hampton, Alix Ashare, J. Stuart Elborn, Anthony De Soyza, Mary Carroll, Lucas R. Hoffman, Clare Lanyon, Samuel M. Moskowitz, George A. O’Toole, Julian Parkhill, Paul J. Planet, Charlotte C. Tenebäck, Michael Tunney, Jonathan B. Zuckerman, Kenneth D. Bruce, Christopher J. van der Gast
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2020.00012
The Role of Microbial Mats in the Removal of Hexavalent Chromium and Associated Shifts in Their Bacterial Community Composition
Cited by: 11
Author(s): Raeid M. M. Abed, Mary Shanti, T. S. Muthukrishnan, Zayana Al-Riyami, Bernhard Pracejus, Daniel Moraetis
Software Mentions: 2
Published: over 6 years ago
10.1007/s11103-015-0368-0
Tissue culture-induced genetic and epigenetic variation in triticale (× Triticosecale spp. Wittmack ex A. Camus 1927) regenerants
Cited by: 50
Author(s): Joanna Machczyńska, J. Zimny, Piotr Tomasz Bednarek
Software Mentions: 2
Published: about 11 years ago
10.1007/s11103-020-00973-5
Precise evaluation of tissue culture-induced variation during optimisation of in vitro regeneration regime in barley
Cited by: 20
Author(s): Renata Orłowska, Piotr Tomasz Bednarek
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2019.01414
Effect of Single Dose of Antimicrobial Administration at Birth on Fecal Microbiota Development and Prevalence of Antimicrobial Resistance Genes in Piglets
Cited by: 14
Author(s): Mohamed Zeineldin, Ameer Megahed, Brandi Burton, Benjamin Blair, Brian Aldridge, James Lowe
Software Mentions: 2
Published: over 7 years ago
10.3389/fmicb.2018.00495
Host Age Affects the Development of Southern Catfish Gut Bacterial Community Divergent From That in the Food and Rearing Water
Cited by: 47
Author(s): Zhimin Zhang, Dapeng Li, Mohamed M. Refaey, Weigang Xu, Rong Tang, Li Li
Software Mentions: 2
Published: over 8 years ago
10.3389/fmicb.2014.00786
Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea
Cited by: 33
Author(s): Carlo Berg, Luisa Listmann, Verona Vandieken, Angela Vogts, Klaus Jürgens
Software Mentions: 2
Published: almost 12 years ago
10.3389/fmicb.2017.00245
Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments
Cited by: 44
Author(s): Julio Bohórquez, Terry J. McGenity, Sokratis Papaspyrou, Emilio García‐Robledo, Alfonso Corzo, Graham J. C. Underwood
Software Mentions: 2
Published: over 9 years ago
10.3389/fmicb.2017.01385
Bacteria Associated to Plants Naturally Selected in a Historical PCB Polluted Soil Show Potential to Sustain Natural Attenuation
Cited by: 23
Author(s): Lorenzo Vergani, Francesca Mapelli, Ramona Marasco, Elena Crotti, Marco Fusi, Antonio Di Guardo, Stefano Armiraglio, Daniele Daffonchio, Sara Borin
Software Mentions: 2
Published: over 9 years ago
10.3389/fmicb.2020.01352
Galactooligosaccharides and Resistant Starch Altered Microbiota and Short-Chain Fatty Acids in an in vitro Fermentation Study Using Gut Contents of Mud Crab (Scylla paramamosain)
Cited by: 19
Author(s): Ngoc Tuan Tran, Yong Tang, Zhongzhen Li, Ming Zou, Xiaobo Wen, Hongyu Ma, Shengkang Li
Software Mentions: 2
Published: over 6 years ago
10.1186/s40168-021-01022-z
Opportunistic bacteria with reduced genomes are effective competitors for organic nitrogen compounds in coastal dinoflagellate blooms
Cited by: 21
Author(s): Han Yu, Nianzhi Jiao, Yao Zhang, Fan Zhang, Chen He, Xuejiao Liang, Ruanhong Cai, Quan Shi
Software Mentions: 2
Published: over 5 years ago
10.1186/s12917-021-02841-w
Blood cultures and blood microbiota analysis as surrogates for bronchoalveolar lavage fluid analysis in dogs with bacterial pneumonia
Cited by: 5
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-019-53346-4
Multi-technique comparison of atherogenic and MCD NASH models highlights changes in sphingolipid metabolism
Cited by: 29
Author(s): Sophie A. Montandon, Emmanuel Somm, Ursula Loizides‐Mangold, Claudio De Vito, Charna Dibner, François R. Jornayvaz
Software Mentions: 2
Published: almost 7 years ago
10.3389/fmicb.2016.01612
Interactions between Obesity Status and Dietary Intake of Monounsaturated and Polyunsaturated Oils on Human Gut Microbiome Profiles in the Canola Oil Multicenter Intervention Trial (COMIT)
Cited by: 60
Author(s): Shuaihua Pu, Hamidreza Khazanehei, Peter J H Jones, Ehsan Khafipour
Software Mentions: 2
Published: about 10 years ago
10.3389/fmicb.2019.00983
Characterization of the Castanopsis carlesii Deadwood Mycobiome by Pacbio Sequencing of the Full-Length Fungal Nuclear Ribosomal Internal Transcribed Spacer (ITS)
Cited by: 17
Author(s): Witoon Purahong, Ausana Mapook, Yuting Wu, Chaur-Tzuhn Chen
Software Mentions: 2
Published: over 7 years ago
10.3389/fmicb.2018.03275
The Influence of Bt Maize Cultivation on Communities of Arbuscular Mycorrhizal Fungi Revealed by MiSeq Sequencing
Cited by: 15
Author(s): Huilan Zeng, Wang Zhong, Fengxiao Tan, Yinghua Shu, Ying Feng, Jianwu Wang
Software Mentions: 2
Published: almost 8 years ago
10.3389/fmicb.2017.00593
Microbial and Isotopic Evidence for Methane Cycling in Hydrocarbon-Containing Groundwater from the Pennsylvania Region
Cited by: 26
Author(s): Adrien Vigneron, Andrew N. Bishop, Eric Alsop, Kellie Hull, Ileana Rhodes, R. C. Hendricks, Ian M. Head, Nicolas Tsesmetzis
Software Mentions: 2
Published: over 9 years ago
10.1002/mgg3.934
MtDNA polymorphism analyses in the Chinese Mongolian group: Efficiency evaluation and further matrilineal genetic structure exploration
Cited by: 11
Author(s): Qiong Lan, Ting Xie, Xiaoye Jin, Yingying Fang, Shuyan Mei, Guang Yang, Bofeng Zhu
Software Mentions: 2
Published: about 7 years ago
10.1186/s12898-018-0214-8
Transition of Ethiopian highland forests to agriculture-dominated landscapes shifts the soil microbial community composition
Cited by: 9
Author(s): Yoseph T. Delelegn, Witoon Purahong, Hans Sandén, Birru Yitaferu, Douglas L. Godbold, Tesfaye Wubet
Software Mentions: 2
Published: almost 8 years ago
10.3389/fmicb.2016.01341
Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Cited by: 59
Author(s): Lucas Dantas Lopes, Michele de Cássia Pereira e Silva, Fernando Dini Andreote
Software Mentions: 2
Published: about 10 years ago
10.3389/fmicb.2019.01712
Indigenous Yeast Interactions in Dual-Starter Fermentations May Improve the Varietal Expression of Moschofilero Wine
Cited by: 19
Author(s): Aspasia Nisiotou, Athanasios Mallouchos, Chrysoula C. Tassou, Georgios Banilas
Software Mentions: 2
Published: over 7 years ago
10.1186/s40168-020-00862-5
Syntrophic acetate oxidation replaces acetoclastic methanogenesis during thermophilic digestion of biowaste
Cited by: 97
Author(s): Stefan Dyksma, Lukas Jansen, Claudia Gallert
Software Mentions: 2
Published: over 6 years ago
10.3390/ph14030212
D-α-Tocopherol-Based Micelles for Successful Encapsulation of Retinoic Acid
Cited by: 24
Author(s): Guendalina Zuccari, Sara Baldassari, Silvana Alfei, Barbara Marengo, Giulia Elda Valenti, Cinzia Domenicotti, Giorgia Ailuno, Carla Villa, Leonardo Marchitto, Gabriele Caviglioli
Software Mentions: 2
Published: over 5 years ago
10.1186/s40168-018-0501-9
Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing
Cited by: 119
Author(s): Ramesh Pandit, Ankit T. Hinsu, Namrata Patel, Prakash G. Koringa, Subhash J. Jakhesara, Jalpa Thakkar, Tejas Shah, Georgina Limon, Androniki Psifidi, Javier Guitian, David Hume, Fiona M. Tomley, D. N. Rank, Muthusamy Raman, K.G. Tirumurugaan, Damer P. Blake, Chaitanya G. Joshi
Software Mentions: 2
Published: over 8 years ago
10.3389/fmicb.2016.00666
Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities
Cited by: 19
Author(s): Ali Nawaz, Witoon Purahong, Robert Lehmann, Martina Herrmann, Kirsten Küsel, Kai Uwe Totsche, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 10 years ago
10.1186/s12898-018-0164-1
Interference competition as a key determinant for spatial distribution of mangrove crabs
Cited by: 19
Author(s): Stefano Cannicci, Marco Fusi, Filippo Cimò, Farid Dahdouh‐Guebas, Sara Fratini
Software Mentions: 2
Published: over 8 years ago
10.1038/s41598-020-69292-5
Carbon steel corrosion by bacteria from failed seal rings at an offshore facility
Cited by: 32
Author(s): Silvia J. Salgar-Chaparro, Adam Darwin, Anna H. Kaksonen, Laura L. Machuca
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-020-72679-z
Edaphic factors and plants influence denitrification in soils from a long-term arable experiment
Cited by: 1
Author(s): Ian M. Clark, Qingling Fu, Maïder Abadie, E. R. Dixon, Aimeric Blaud, P. R. Hirsch
Software Mentions: 2
Published: about 6 years ago
10.1186/s12864-015-1862-0
Lasting effects of early exposure to temperature on the gonadal transcriptome at the time of sex differentiation in the European sea bass, a fish with mixed genetic and environmental sex determination
Cited by: 66
Author(s): Noèlia Díaz, Francesc Piferrer
Software Mentions: 2
Published: about 11 years ago
10.3389/fmicb.2019.02969
Forage Rotations Conserve Diversity of Arbuscular Mycorrhizal Fungi and Soil Fertility
Cited by: 26
Author(s): Elisa Pellegrino, Hannes A. Gamper, Valentina Ciccolini, Laura Ercoli
Software Mentions: 2
Published: almost 7 years ago
10.7717/peerj.9152
Phyllosphere bacterial assembly in citrus crop under conventional and ecological management
Cited by: 4
Author(s): C R Fernandes de Carvalho, Armando Cavalcante Franco Dias, Sérgio Kenji Homma, Elke Jbn Cardoso
Software Mentions: 2
Published: over 6 years ago
10.1186/s12864-015-2340-4
Effect of roughage on rumen microbiota composition in the efficient feed converter and sturdy Indian Jaffrabadi buffalo (Bubalus bubalis)
Cited by: 37
Author(s): Neelam M. Nathani, Amrutlal K. Patel, Malathi Shekar, Bhaskar Reddy, S. V. Shah, Pravin M. Lunagaria, Ramesh Kothari, Chaitanya G. Joshi
Software Mentions: 2
Published: almost 11 years ago
10.7717/peerj.5883
A new microvertebrate assemblage from the Mussentuchit Member, Cedar Mountain Formation: insights into the paleobiodiversity and paleobiogeography of early Late Cretaceous ecosystems in western North America
Cited by: 14
Author(s): Haviv M. Avrahami, Terry A. Gates, Andrew B. Heckert, Peter J. Makovicky, Lindsay E. Zanno
Software Mentions: 2
Published: almost 8 years ago
10.3390/ani11040982
A Multi-Biomarker Approach in European Sea Bass Exposed to Dynamic Temperature Changes under Dietary Supplementation with Origanum vulgare Essential Oil
Cited by: 6
Author(s): Francesca Rita Dinardo, Aristide Maggiolino, Elisabetta Casalino, M. Deflorio, Gerardo Centoducati
Software Mentions: 2
Published: over 5 years ago
10.3389/fncel.2016.00152
A Novel Form of Compensation in the Tg2576 Amyloid Mouse Model of Alzheimer’s Disease
Cited by: 5
Author(s): Attila Somogyi, Zoltán Katonai, Alán Alpár, Ervin Wolf
Software Mentions: 2
Published: over 10 years ago
10.3389/fcimb.2021.629723
The Oral Microbiome in Periodontal Health
Cited by: 41
Author(s): Magdalena Lenartova, Barbora Tesinska, Taťjana Janatová, Ondrej Hrebicek, Jaroslav Myšák, Jiřı́ Janata, Lucie Najmanová
Software Mentions: 2
Published: over 5 years ago
10.3389/fgene.2021.679162
Screening and Mapping for Head Blast Resistance in a Panel of CIMMYT and South Asian Bread Wheat Germplasm
Cited by: 15
Author(s): Xinyao He, Philomin Juliana, Muhammad Rezaul Kabir, Krishna Kanta Roy, Rabiul Islam, Félix Marza, Gary L. Peterson, Gyanendra Singh, Aakash Chawade, Arun Kumar Joshi, Ravi P. Singh, Pawan Kumar Singh
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-021-88658-x
Uncovering the hidden bacterial ghost communities of yeast and experimental evidences demonstrates yeast as thriving hub for bacteria
Cited by: 3
Author(s): B. Indu, Tallapragada Keertana, Ipsita Sahu, Uppada Jagadeeshwari, Ch. Sasikala, Chintalapati Venkata Ramana
Software Mentions: 2
Published: over 5 years ago
10.3390/foods9050595
Molecular Characterization and Enological Potential of A High Lactic Acid-Producing Lachancea thermotolerans Vineyard Strain
Cited by: 27
Author(s): Georgios Sgouros, Athanasios Mallouchos, Maria-Evangelia Filippousi, Georgios Banilas, Aspasia Nisiotou
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-021-91182-7
Soil degradation influences soil bacterial and fungal community diversity in overgrazed alpine meadows of the Qinghai-Tibet Plateau
Cited by: 20
Author(s): Lin Dong, Jingjing Li, Juan Sun, Chao Yang
Software Mentions: 2
Published: over 5 years ago
10.3389/fgene.2021.676791
Day 7 Embryos Change the Proteomics and Exosomal Micro-RNAs Content of Bovine Uterine Fluid: Involvement of Innate Immune Functions
Cited by: 5
Author(s): Kaoru Kusama, Mohammad Bazlur Rashid, Rasoul Kowsar, Mohamed Ali Marey, Anup Kumar Talukder, Kentaro Nagaoka, M. Shimada, Hasan Khatib, Kazuhiko Imakawa, Akio Miyamoto
Software Mentions: 2
Published: over 5 years ago
10.1007/s10493-020-00587-y
Patterns of intraspecific morphological variability in soil mites reflect their dispersal ability
Cited by: 1
Author(s): Julia Baumann
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12864-020-07333-z
Nutrient-imbalanced conditions shift the interplay between zooplankton and gut microbiota
Cited by: 4
Author(s): Yingdong Li, Zhimeng Xu, Hongbin Liu
Software Mentions: 2
Published: almost 6 years ago
10.1186/s13072-017-0165-x
Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning
Cited by: 17
Author(s): Gabriel Gutiérrez, Gonzalo Millán-Zambrano, Daniel A. Medina, Antonio Jordán-Pla, Jose E. Pérez-Ortı́n, Xenia Peñate, Sebastián Chávez
Software Mentions: 2
Published: almost 9 years ago
10.1007/s11356-016-7554-8
Analysis of morphological and molecular composition changes in allergenic Artemisia vulgaris L. pollen under traffic pollution using SEM and FTIR spectroscopy
Cited by: 37
Author(s): Joanna Depciuch, Idalia Kasprzyk, Elzbieta Roga, Magdalena Parlinska-Wojtan
Software Mentions: 2
Published: about 10 years ago
10.1007/s10661-017-6135-8
Trace element concentrations in livers of Common Buzzards Buteo buteo from eastern Poland
Cited by: 5
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak, Grzegorz Pitucha
Software Mentions: 2
Published: about 9 years ago
10.3390/ijms21249509
Comprehensive Analysis Reveals Novel Interactions between Circulating MicroRNAs and Gut Microbiota Composition in Human Obesity
Cited by: 20
Author(s): Taís Silveira Assmann, Amelia Marti, José Ignacio Riezu-Boj, Fermı́n I. Milagro, J. Alfredo Martínéz
Software Mentions: 2
Published: almost 6 years ago
10.3390/ijms221910871
Characterization of the Human Eccrine Sweat Proteome—A Focus on the Biological Variability of Individual Sweat Protein Profiles
Cited by: 7
Author(s): Bastien Burat, A. Reynaerts, Dominique Baiwir, Maximilien Fléron, Gauthier Eppe, Teresinha Leal, Gabriel Mazzucchelli
Software Mentions: 2
Published: about 5 years ago
10.1186/s40413-018-0186-3
Extended IgE profile based on an allergen macroarray: a novel tool for precision medicine in allergy diagnosis
Cited by: 68
Author(s): Enrico Heffler, Francesca Puggioni, Silvia Peveri, Marcello Montagni, Giorgio Walter Canonica, Giovanni Melioli
Software Mentions: 2
Published: almost 9 years ago
10.1007/s11356-021-12750-y
Does river channelization increase the abundance of invasive crayfish? Survey of Faxonius limosus in small Central European streams
Cited by: 1
Author(s): Maciej Bonk, Rafał Bobrek
Software Mentions: 2
Published: over 5 years ago
10.1242/bio.045674
The ventral epithelium of <i>Trichoplax adhaerens</i> deploys in distinct patterns cells that secrete digestive enzymes, mucus or diverse neuropeptides
Cited by: 24
Author(s): Tatiana D. Mayorova, Katherine Hammar, Christine A. Winters, Thomas S. Reese, Carolyn L. Smith
Software Mentions: 2
Published: almost 8 years ago
10.1186/s12862-016-0836-4
Discrete phenotypes are not underpinned by genome-wide genetic differentiation in the squat lobster Munida gregaria (Crustacea: Decapoda: Munididae): a multi-marker study covering the Patagonian shelf
Cited by: 6
Author(s): Chen Wang, Shobhit Agrawal, Jürgen Laudien, Vreni Häussermann, Christoph Held
Software Mentions: 2
Published: almost 10 years ago
10.3897/zookeys.140.1925
Triteleia peyerimhoffi comb. n., a remarkably variable circum-Mediterranean scelionid (Hymenoptera, Platygastroidea)
Cited by: 5
Author(s): Ovidiu Alin Popovici, Ferdinando Bin, Lubomír Masner, M. Popovici, David G. Notton
Software Mentions: 2
Published: about 15 years ago
10.3389/fimmu.2018.01996
Identification of Distinct Unmutated Chronic Lymphocytic Leukemia Subsets in Mice Based on Their T Cell Dependency
Cited by: 7
Author(s): Simar Pal Singh, Marjolein J. W. de Bruijn, Mariana P. de Almeida, Ruud W. J. Meijers, Lars Nitschke, Anton W. Langerak, Saravanan Y. Pillai, Ralph Stadhouders, Rudolf W. Hendriks
Software Mentions: 2
Published: about 8 years ago
10.3389/fmicb.2012.00422
Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change
Cited by: 51
Author(s): Sophie Charvet, Warwick F. Vincent, A. Comeau, Connie Lovejoy
Software Mentions: 2
Published: almost 15 years ago
10.1002/ece3.5040
Different responses of avian feeding guilds to spatial and environmental factors across an elevation gradient in the central Himalaya
Cited by: 21
Author(s): Zhifeng Ding, Jiankun Liang, Yiming Hu, Zhixin Zhou, Sun Hongbin, Lina Liu, Haijun Liu, Huijian Hu, Xingfeng Si
Software Mentions: 2
Published: over 7 years ago
10.1002/ece3.2220
Leaf litter arthropod responses to tropical forest restoration
Cited by: 54
Author(s): Rebecca J. Cole, Karen D. Holl, Rakan A. Zahawi, Philipp Wickey, Alan R. Townsend
Software Mentions: 2
Published: over 10 years ago
10.1002/ece3.1828
Patterns of contact call differentiation in the panmictic East African Abyssinian White‐eye Z osterops abyssinicus (Aves: Passeriformes)
Cited by: 3
Author(s): Jan Christian Habel, Martin Husemann, Werner Ulrich
Software Mentions: 2
Published: almost 11 years ago
10.1002/ece3.3074
Dampening of population cycles in voles affects small mammal community structure, decreases diversity, and increases prevalence of a zoonotic disease
Cited by: 21
Author(s): Frauke Ecke, David G. Angeler, Магнус Магнуссон, Hussein Khalil, Birger Hörnfeldt
Software Mentions: 2
Published: over 9 years ago
10.7717/peerj.5210
Spatial and temporal variations of aridity shape dung beetle assemblages towards the Sahara desert
Cited by: 8
Author(s): Indradatta deCastro‐Arrazola, Joaquín Hortal, Marco Moretti, Francisco Sánchez‐Piñero
Software Mentions: 2
Published: about 8 years ago
10.7717/peerj.2059
Geometric morphometric analysis of intratrackway variability: a case study on theropod and ornithopod dinosaur trackways from Münchehagen (Lower Cretaceous, Germany)
Cited by: 38
Author(s): Jens N. Lallensack, Anneke H. van Heteren, Oliver Wings
Software Mentions: 2
Published: over 10 years ago
10.1002/ece3.6504
Hidden diversity in Antarctica: Molecular and morphological evidence of two different species within one of the most conspicuous ascidian species
Cited by: 6
Author(s): Micaela Ruiz, Anabela Taverna, Natalia Servetto, Ricardo Sahade, Christoph Held
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0067280
Genetic Diversity and Population Structure of Tetraploid Wheats (Triticum turgidum L.) Estimated by SSR, DArT and Pedigree Data
Cited by: 118
Author(s): Giovanni Laidò, Giacomo Mangini, Francesca Taranto, Ágata Gadaleta, A. Blanco, Luigi Cattivelli, Daniela Marone, Anna Maria Mastrangelo, Roberto Papa, Pasquale De Vita
Software Mentions: 2
Published: over 13 years ago
10.1371/journal.pone.0188864
InDel marker based genetic differentiation and genetic diversity in traditional rice (Oryza sativa L.) landraces of Chhattisgarh, India
Cited by: 14
Author(s): Parmeshwar K. Sahu, Suvendu Mondal, Deepak Sharma, Gautam Vishwakarma, Vikash Kumar, Bikram Das
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0223932
Evaluation of bacterial proliferation with a microfluidic-based device: Antibiochip
Cited by: 0
Author(s): Valentina Gallo, Alessia Ruiba, Massimo Zanin, Paolo Begnamino, S. Ledda, Tiziana Pesce, Giovanni Melioli, M. Pizzi
Software Mentions: 2
Published: over 6 years ago
10.1186/1471-2164-13-67
Aluminum tolerance association mapping in triticale
Cited by: 35
Author(s): Agnieszka Niedziela, Piotr Tomasz Bednarek, H. Cichy, Grzegorz Budzianowski, Andrzej Kilian, A. Anioł
Software Mentions: 2
Published: over 14 years ago
10.1371/journal.pone.0168933
Colonization in North American Arid Lands: The Journey of Agarito (Berberis trifoliolata) Revealed by Multilocus Molecular Data and Packrat Midden Fossil Remains
Cited by: 17
Author(s): Diego F. Angulo, Leonardo Amarilla, Ana M. Antón, Victoria Sosa
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0068429
Invasion Is a Community Affair: Clandestine Followers in the Bacterial Community Associated to Green Algae, Caulerpa racemosa, Track the Invasion Source
Cited by: 58
Author(s): Tânia Aires, Ester A. Serrão, Gary A. Kendrick, Carlos M. Duarte, Sophie Arnaud–Haond
Software Mentions: 2
Published: over 13 years ago
10.1371/journal.pone.0072627
Microbial Communities of Deep-Sea Methane Seeps at Hikurangi Continental Margin (New Zealand)
Cited by: 68
Author(s): S. Emil Ruff, Julia Arnds, Katrin Knittel, Rudolf Amann, Gunter Wegener, Alban Ramette, Antje Boetius
Software Mentions: 2
Published: about 13 years ago
10.1371/journal.pone.0218838
Spatial distribution of epibionts on olive ridley sea turtles at Playa Ostional, Costa Rica
Cited by: 5
Author(s): Nathan J. Robinson, Emily M. Lazo-Wasem, Brett Oliver Butler, Eric A. Lazo-Wasem, John D. Zardus, Theodora Pinou
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0225369
Normal and altered masticatory load impact on the range of craniofacial shape variation: An analysis of pre-Hispanic and modern populations of the American Southern Cone
Cited by: 12
Author(s): Andrea Eyquem, Susan Kuzminsky, J. Tor Aguilera, Williams Astudillo, Viviana Toro‐Ibacache
Software Mentions: 2
Published: almost 7 years ago
10.1128/AEM.02371-20
Manipulation of Saliva-Derived Microcosm Biofilms To Resemble Dysbiotic Subgingival Microbiota
Cited by: 2
Author(s): Yaling Jiang, Bernd W. Brandt, Mark J. Buijs, Lei Cheng, R.A.M. Exterkate, Wim Crielaard, Dongsheng Deng
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0202446
Ruminal methane emissions, metabolic, and microbial profile of Holstein steers fed forage and concentrate, separately or as a total mixed ration
Cited by: 24
Author(s): Rajaraman Bharanidharan, Selvaraj Arokiyaraj, Eun Bae Kim, Young Moo Lee, Yang Won Woo, Youngjun Na, Danil Kim, Kyoung Hoon Kim
Software Mentions: 2
Published: about 8 years ago
10.1264/jsme2.ME14119
Increase in Bacterial Colony Formation from a Permafrost Ice Wedge Dosed with a &lt;i&gt;Tomitella biformata&lt;/i&gt; Recombinant Resuscitation-Promoting Factor Protein
Cited by: 9
Author(s): Indun Dewi Puspita, Wataru Kitagawa, Yoichi Kamagata, Michiko Tanaka, Cindy H. Nakatsu
Software Mentions: 2
Published: almost 12 years ago
10.3389/fmicb.2019.00171
Modulation of Intestinal Microbiota in Solea senegalensis Fed Low Dietary Level of Ulva ohnoi
Cited by: 24
Author(s): Silvana Tapia‐Paniagua, Milena Fumanal, Victoria Anguís, Catalina Fernández‐Díaz, Francisco Javier Alarcón, Miguel A. Moriñigo, M.C. Balebona
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0240685
Ecological status of a freshwater tectonic lake of the indo-burmese province: Implications for livelihood development
Cited by: 0
Author(s): Arup Kumar Hazarika, Unmilan Kalita, Rev. George Michael, Saroj Panthi, Dulumoni Das
Software Mentions: 2
Published: almost 6 years ago
10.3389/fmicb.2017.01231
Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
Cited by: 26
Author(s): Yiseul Kim, William Van Bonn, Tiong Gim Aw, Joan B. Rose
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0153061
Biocomplexity in Populations of European Anchovy in the Adriatic Sea
Cited by: 10
Author(s): Paolo Ruggeri, Andrea Splendiani, Giulia Occhipinti, Tatiana Fioravanti, Alberto Santojanni, Iole Leonori, Andrea De Felice, Enrico Arneri, Gabriele Procaccini, Gaetano Catanese, Vjekoslav Tičina, A. Bonanno, Paola Nisi Cerioni, Massimo Giovannotti, W. Stewart Grant, Vincenzo Caputo Barucchi
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0243848
Influence of vintage, geographic location and cultivar on the structure of microbial communities associated with the grapevine rhizosphere in vineyards of San Juan Province, Argentina
Cited by: 13
Author(s): Mónica Oyuela Aguilar, Alex Gobbi, Patrick Browne, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen, Liliana Semorile, Mariano Pistorio
Software Mentions: 2
Published: almost 6 years ago
10.7717/peerj.1197
Cranial and mandibular shape variation in the genus<i>Carollia</i>(Mammalia: Chiroptera) from Colombia: biogeographic patterns and morphological modularity
Cited by: 16
Author(s): Camilo López‐Aguirre, Jairo Pérez‐Torres, L. T. Wilson
Software Mentions: 2
Published: about 11 years ago