bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1007/s00244-017-0481-y

Factors Affecting Element Concentrations in Eggshells of Three Sympatrically Nesting Waterbirds in Northern Poland
Cited by: 3
Author(s): Ignacy Kitowski, Dariusz Jakubas, Piotr Indykiewicz, Dariusz Wiącek
Software Mentions: 2
Published: almost 9 years ago

10.3390/microorganisms7110518

Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem
Cited by: 11
Author(s): Despoina Vokou, Savvas Genitsaris, Katerina Karamanoli, Katerina Vareli, Marina Zachari, Despoina Voggoli, Nikolaos Monokrousos, John M. Halley, Ioannis Sainis
Software Mentions: 2
Published: almost 7 years ago

10.3389/fpls.2018.00463

Forest Soil Phosphorus Resources and Fertilization Affect Ectomycorrhizal Community Composition, Beech P Uptake Efficiency, and Photosynthesis
Cited by: 43
Author(s): Aljoša Zavišić, Nan Yang, Sven Marhan, Ellen Kandeler, Andrea Polle
Software Mentions: 2
Published: over 8 years ago

10.3389/fpls.2014.00806

Genetic diversity in aspen and its relation to arthropod abundance
Cited by: 6
Author(s): Chunxia Zhang, Barbara Vornam, Katharina Volmer, Kathleen Prinz, Frauke Kleemann, Lars Köhler, Andrea Polle, Reiner Finkeldey
Software Mentions: 2
Published: over 11 years ago

10.3389/fnut.2021.590978

Mainstreaming Local Food Species for Nutritional and Livelihood Security: Insights From Traditional Food Systems of Adi Community of Arunachal Pradesh, India
Cited by: 3
Author(s): Ranjay K. Singh, Rakesh Bhardwaj, Anamika Singh, Temin Payum, Kumar Arvind, Anshuman Singh, L. Wangchu, Sanjay Kumar Upadhyay
Software Mentions: 2
Published: about 5 years ago

10.3390/microorganisms9061214

Gut Microbiota Dynamics in Natural Populations of Pintomyia evansi under Experimental Infection with Leishmania infantum
Cited by: 4
Author(s): Rafael José Vivero, Víctor Alfonso Castañeda-Monsalve, Lupe Romero, Gregory D. D. Hurst, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera
Software Mentions: 2
Published: over 5 years ago

10.1186/s13568-019-0770-0

Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus
Cited by: 13
Author(s): Wei Feng, Jing Zhang, Ivan Jakovlić, Fan Xiong, Shangong Wu, Hong Zou, Wenxiang Li, Ming Li, Guitang Wang
Software Mentions: 2
Published: over 7 years ago

10.3389/fpls.2016.01619

Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production
Cited by: 34
Author(s): José L. Rambla, Almudena Trapero-Mozos, Gianfranco Diretto, Ángela Rubio-Moraga, Antonio Granell, Lourdes Gómez-Gómez, Oussama Ahrazem
Software Mentions: 2
Published: almost 10 years ago

10.3390/insects8030064

Monitoring Effect of Fire on Ant Assemblages in Brazilian Rupestrian Grasslands: Contrasting Effects on Ground and Arboreal Fauna
Cited by: 13
Author(s): Diego V. Anjos, Ricardo I. Campos, Renata Bernardes Faria Campos, Sérvio Pontes Ribeiro
Software Mentions: 2
Published: about 9 years ago

10.3390/microorganisms8060942

Uncovered Microbial Diversity in Antarctic Cryptoendolithic Communities Sampling Three Representative Locations of the Victoria Land
Cited by: 10
Author(s): Claudia Coleine, Nuttapon Pombubpa, Laura Zucconi, Silvano Onofri, Benedetta Turchetti, Pietro Buzzini, Jason E. Stajich, Laura Selbmann
Software Mentions: 2
Published: about 6 years ago

10.1186/1471-2180-12-140

Diversity and dynamics of Archaea in an activated sludge wastewater treatment plant
Cited by: 41
Author(s): Nils Johan Fredriksson, Malte Hermansson, Britt‐Marie Wilén
Software Mentions: 2
Published: over 14 years ago

10.3390/genes12071022

The Influence of Soil Fertilization on the Distribution and Diversity of Phosphorus Cycling Genes and Microbes Community of Maize Rhizosphere Using Shotgun Metagenomics
Cited by: 12
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: about 5 years ago

10.3390/microorganisms8060938

Sex-Specific Associations between Gut Prevotellaceae and Host Genetics on Adiposity
Cited by: 26
Author(s): Amelia Marti, José Ignacio Riezu-Boj, Elizabeth Guruceaga, Fermı́n I. Milagro, J. Alfredo Martínéz
Software Mentions: 2
Published: about 6 years ago

10.3390/microorganisms7020033

Cave Drip Water-Related Samples as a Natural Environment for Aromatic Hydrocarbon-Degrading Bacteria
Cited by: 15
Author(s): Eric de Lima Silva Marques, Gislaine S. Silva, João Carlos Teixeira Dias, Eduardo Gross, Moara Silva Costa, Rachel Passos Rezende
Software Mentions: 2
Published: over 7 years ago

10.1186/2046-9063-10-11

Benthic infaunal community structuring in an acidified tropical estuarine system
Cited by: 15
Author(s): M. Belal Hossain, David J. Marshall
Software Mentions: 2
Published: over 12 years ago

10.1016/j.geoderma.2019.01.001

Impact of conservation tillage in rice–based cropping systems on soil aggregation, carbon pools and nutrients
Cited by: 101
Author(s): Rajiv Nandan, Vikram Singh, S. K. Singh, Virender Kumar, Kali Krishna Hazra, Chaitanya Prasad Nath, Shishpal Poonia, R. K. Malik, Ranjan Bhattacharyya, Andrew J. McDonald
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2017.00608

Inbred Mouse Populations Exhibit Intergenerational Changes in Intestinal Microbiota Composition and Function Following Introduction to a Facility
Cited by: 16
Author(s): Jocelyn M. Choo, Paul J. Trim, Lex E. X. Leong, Guy C. J. Abell, Carly Brune, Nicole Jeffries, Steven Wesselingh, T. Neil Dear, Marten F. Snel, Geraint B. Rogers
Software Mentions: 2
Published: over 9 years ago

10.3390/microorganisms9071373

Can Potato Plants Be Colonized with the Fungi Metarhizium and Beauveria under Their Natural Load in Agrosystems?
Cited by: 15
Author(s): Maksim Tyurin, Мarsel R. Kabilov, Н. В. Смирнова, Oksana G. Tomilova, O. N. Yaroslavtseva, Tatyana Alikina, В. В. Глупов, V. Yu. Kryukov
Software Mentions: 2
Published: about 5 years ago

10.3390/microorganisms8091387

Both Soil Bacteria and Soil Chemical Property Affected the Micropredator Myxobacterial Community: Evidence from Natural Forest Soil and Greenhouse Rhizosphere Soil
Cited by: 6
Author(s): Zhihui Yang, Xianjiao Zhang, Qing Yao, Honghui Zhu
Software Mentions: 2
Published: almost 6 years ago

10.1186/s13568-021-01182-z

Soil fertilization affects the abundance and distribution of carbon and nitrogen cycling genes in the maize rhizosphere
Cited by: 20
Author(s): Matthew Chekwube Enebe, Olubukola Oluranti Babalola
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms8010058

A Deeper Look into the Biodiversity of the Extremely Acidic Copahue volcano-Río Agrio System in Neuquén, Argentina
Cited by: 9
Author(s): Germán López Bedogni, Francisco Luis Massello, Alejandra Giaveno, Edgardo R. Donati, María Sofía Urbieta
Software Mentions: 2
Published: over 6 years ago

10.3390/microorganisms9020355

Landscape Setting Drives the Microbial Eukaryotic Community Structure in Four Swedish Mountain Lakes over the Holocene
Cited by: 4
Author(s): Eric Capo, Sofia Ninnes, Isabelle Domaizon, Stefan Bertilsson, Christian Bigler, Xiaoru Wang, Richard Bindler, Johan Rydberg
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2016.01046

Populations of Stored Product Mite Tyrophagus putrescentiae Differ in Their Bacterial Communities
Cited by: 35
Author(s): Tomáš Erban, Pavel B. Klimov, Jaroslav Smrž, Thomas W. Phillips, Marta Nešvorná, Jan Kopecký, Jan Hubert
Software Mentions: 2
Published: about 10 years ago

10.3390/microorganisms9071419

Metagenomic Insight into the Community Structure of Maize-Rhizosphere Bacteria as Predicted by Different Environmental Factors and Their Functioning within Plant Proximity
Cited by: 12
Author(s): Saheed Adekunle Akinola, Ayansina Segun Ayangbenro, Olubukola Oluranti Babalola
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2015.01166

Taxonomic and functional characteristics of microbial communities and their correlation with physicochemical properties of four geothermal springs in Odisha, India
Cited by: 57
Author(s): Jhasketan Badhai, Tarini Shankar Ghosh, Subrata K. Das
Software Mentions: 2
Published: almost 11 years ago

10.3390/microorganisms9051088

Metagenomics Analysis Reveals an Extraordinary Inner Bacterial Diversity in Anisakids (Nematoda: Anisakidae) L3 Larvae
Cited by: 4
Author(s): Susana C. Arcos, Felipe Lira, Lee Robertson, Miguel Ángel González Rebollo, Noelia Carballeda-Sangiao, Isabel Sánchez‐Alonso, Laura Zamorano, Mercedes Careche, Yolanda Jiménez‐Ruiz, Ricardo Ramos, Carlos Lloréns, Miguel González‐Muñoz, Antonio Oliver, José Luis Martínez, Andrés Navas
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2019.01209

Effect of Re-acidification on Buffalo Grass Rhizosphere and Bulk Microbial Communities During Phytostabilization of Metalliferous Mine Tailings
Cited by: 23
Author(s): Linnea K. Honeker, Catherine F. Gullo, Julia W. Neilson, Jon Chorover, Raina M. Maier
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2016.00536

Investigation of the Activity of the Microorganisms in a Reblochon-Style Cheese by Metatranscriptomic Analysis
Cited by: 46
Author(s): Christophe Monnet, Éric Dugat-Bony, Dominique Swennen, Jean-Marie Beckerich, Françoise Irlinger, Sébastien Fraud, Pascal Bonnarme
Software Mentions: 2
Published: over 10 years ago

10.3390/microorganisms8060908

Future Climate Significantly Alters Fungal Plant Pathogen Dynamics during the Early Phase of Wheat Litter Decomposition
Cited by: 17
Author(s): Sara Fareed Mohamed Wahdan, Shakhawat Hossen, Benjawan Tanunchai, Martin Schädler, François Buscot, Witoon Purahong
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2017.00245

Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments
Cited by: 44
Author(s): Julio Bohórquez, Terry J. McGenity, Sokratis Papaspyrou, Emilio García‐Robledo, Alfonso Corzo, Graham J. C. Underwood
Software Mentions: 2
Published: over 9 years ago

10.1186/s12870-021-03037-y

Transcriptomic resources for prairie grass (Bromus catharticus): expressed transcripts, tissue-specific genes, and identification and validation of EST-SSR markers
Cited by: 11
Author(s): Ming Sun, Zhixiao Dong, Jian Yang, Wen Bing Wu, Chenglin Zhang, Jianbo Zhang, Junlong Zhao, Yi Xiong, Shangang Jia, Xiao Ma
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2020.01352

Galactooligosaccharides and Resistant Starch Altered Microbiota and Short-Chain Fatty Acids in an in vitro Fermentation Study Using Gut Contents of Mud Crab (Scylla paramamosain)
Cited by: 19
Author(s): Ngoc Tuan Tran, Yong Tang, Zhongzhen Li, Ming Zou, Xiaobo Wen, Hongyu Ma, Shengkang Li
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2014.00786

Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea
Cited by: 33
Author(s): Carlo Berg, Luisa Listmann, Verona Vandieken, Angela Vogts, Klaus Jürgens
Software Mentions: 2
Published: over 11 years ago

10.3389/fmicb.2017.00574

Characterization of Unexplored Deadwood Mycobiome in Highly Diverse Subtropical Forests Using Culture-independent Molecular Technique
Cited by: 30
Author(s): Witoon Purahong, Katherina A. Pietsch, Guillaume Lentendu, Ricardo Schöps, Helge Bruelheide, Christian Wirth, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2018.00423

Halotolerant Exiguobacterium profundum PHM11 Tolerate Salinity by Accumulating L-Proline and Fine-Tuning Gene Expression Profiles of Related Metabolic Pathways
Cited by: 21
Author(s): Vikas Patel, R. P. Srivastava, Anjney Sharma, Anchal Srivastava, Surinder Singh, Alok Kumar Srivastava, Prem Lal Kashyap, Hillol Chakdar, Kurinji Pandiyan, Alok Kalra, Anil Kumar Saxena
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-017-14527-1

Anaerobic digestion of pig manure supernatant at high ammonia concentrations characterized by high abundances of Methanosaeta and non-euryarchaeotal archaea
Cited by: 29
Author(s): Anna Synnøve Røstad Nordgård, Wenche Hennie Bergland, Ôlav Vadstein, В. А. Миронов, Rune Bakke, Kjetill Østgaard, Ingrid Bakke
Software Mentions: 2
Published: almost 9 years ago

10.3390/plants9060790

Mitigation of the Adverse Effects of the El Niño (El Niño, La Niña) Southern Oscillation (ENSO) Phenomenon and the Most Important Diseases in Avocado cv. Hass Crops
Cited by: 8
Author(s): Joaquín Guillermo Ramírez‐Gil, Juan Camilo Henao-Rojas, Juan Gonzalo Morales Osorio
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2019.01712

Indigenous Yeast Interactions in Dual-Starter Fermentations May Improve the Varietal Expression of Moschofilero Wine
Cited by: 19
Author(s): Aspasia Nisiotou, Athanasios Mallouchos, Chrysoula C. Tassou, Georgios Banilas
Software Mentions: 2
Published: about 7 years ago

10.1186/s40168-020-00810-3

Lung function and microbiota diversity in cystic fibrosis
Cited by: 115
Author(s): Leah Cuthbertson, Alan W. Walker, Anna Oliver, Geraint B. Rogers, Damian W. Rivett, Thomas H. Hampton, Alix Ashare, J. Stuart Elborn, Anthony De Soyza, Mary Carroll, Lucas R. Hoffman, Clare Lanyon, Samuel M. Moskowitz, George A. O’Toole, Julian Parkhill, Paul J. Planet, Charlotte C. Tenebäck, Michael Tunney, Jonathan B. Zuckerman, Kenneth D. Bruce, Christopher J. van der Gast
Software Mentions: 2
Published: over 6 years ago

10.1007/s11103-015-0368-0

Tissue culture-induced genetic and epigenetic variation in triticale (× Triticosecale spp. Wittmack ex A. Camus 1927) regenerants
Cited by: 50
Author(s): Joanna Machczyńska, J. Zimny, Piotr Tomasz Bednarek
Software Mentions: 2
Published: about 11 years ago

10.3389/fmicb.2016.01341

Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Cited by: 59
Author(s): Lucas Dantas Lopes, Michele de Cássia Pereira e Silva, Fernando Dini Andreote
Software Mentions: 2
Published: about 10 years ago

10.3389/fmicb.2017.00593

Microbial and Isotopic Evidence for Methane Cycling in Hydrocarbon-Containing Groundwater from the Pennsylvania Region
Cited by: 26
Author(s): Adrien Vigneron, Andrew N. Bishop, Eric Alsop, Kellie Hull, Ileana Rhodes, R. C. Hendricks, Ian M. Head, Nicolas Tsesmetzis
Software Mentions: 2
Published: over 9 years ago

10.3389/fmicb.2016.01612

Interactions between Obesity Status and Dietary Intake of Monounsaturated and Polyunsaturated Oils on Human Gut Microbiome Profiles in the Canola Oil Multicenter Intervention Trial (COMIT)
Cited by: 60
Author(s): Shuaihua Pu, Hamidreza Khazanehei, Peter J H Jones, Ehsan Khafipour
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12889-018-6329-1

Criterion validity and test-retest reliability of SED-GIH, a single item question for assessment of daily sitting time
Cited by: 13
Author(s): Kristina Larsson, Lena Kallings, Örjan Ekblom, Victoria Blom, Eva Andersson, Maria Ekblom
Software Mentions: 2
Published: over 7 years ago

10.1186/s40168-018-0587-0

Estrogen-mediated gut microbiome alterations influence sexual dimorphism in metabolic syndrome in mice
Cited by: 128
Author(s): Kanakaraju Kaliannan, Ruairi C. Robertson, Kiera Murphy, Catherine Stanton, Chao Kang, Bin Wang, Lei Hao, Atul K. Bhan, Jing Kang
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2017.01231

Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
Cited by: 26
Author(s): Yiseul Kim, William Van Bonn, Tiong Gim Aw, Joan B. Rose
Software Mentions: 2
Published: about 9 years ago

10.3389/fmicb.2016.00666

Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities
Cited by: 19
Author(s): Ali Nawaz, Witoon Purahong, Robert Lehmann, Martina Herrmann, Kirsten Küsel, Kai Uwe Totsche, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-018-32747-x

First insight into microbiome profile of fungivorous thrips Hoplothrips carpathicus (Insecta: Thysanoptera) at different developmental stages: molecular evidence of Wolbachia endosymbiosis
Cited by: 18
Author(s): Agnieszka Kaczmarczyk, Halina Kucharczyk, Marek Kucharczyk, Przemysław Kapusta, Jerzy Sell, Sylwia Zielińska
Software Mentions: 2
Published: almost 8 years ago

10.1186/s40168-021-01022-z

Opportunistic bacteria with reduced genomes are effective competitors for organic nitrogen compounds in coastal dinoflagellate blooms
Cited by: 21
Author(s): Han Yu, Nianzhi Jiao, Yao Zhang, Fan Zhang, Chen He, Xuejiao Liang, Ruanhong Cai, Quan Shi
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2019.02969

Forage Rotations Conserve Diversity of Arbuscular Mycorrhizal Fungi and Soil Fertility
Cited by: 26
Author(s): Elisa Pellegrino, Hannes A. Gamper, Valentina Ciccolini, Laura Ercoli
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.00171

Modulation of Intestinal Microbiota in Solea senegalensis Fed Low Dietary Level of Ulva ohnoi
Cited by: 24
Author(s): Silvana Tapia‐Paniagua, Milena Fumanal, Victoria Anguís, Catalina Fernández‐Díaz, Francisco Javier Alarcón, Miguel A. Moriñigo, M.C. Balebona
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-019-40551-4

Consistent bacterial selection by date palm root system across heterogeneous desert oasis agroecosystems
Cited by: 27
Author(s): María J. Mosqueira, Ramona Marasco, Marco Fusi, Grégoire Michoud, Giuseppe Merlino, Ameur Chérif, Daniele Daffonchio
Software Mentions: 2
Published: over 7 years ago

10.3389/fcimb.2021.629723

The Oral Microbiome in Periodontal Health
Cited by: 41
Author(s): Magdalena Lenartova, Barbora Tesinska, Taťjana Janatová, Ondrej Hrebicek, Jaroslav Myšák, Jiřı́ Janata, Lucie Najmanová
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-45279-9

Changes in human mandibular shape during the Terminal Pleistocene-Holocene Levant
Cited by: 12
Author(s): Ariel Pokhojaev, Hadas Leah Avni, Tatiana Sella Tunis, Rachel Sarig, Hila May
Software Mentions: 2
Published: about 7 years ago

10.1016/j.scitotenv.2018.08.101

Reducing water use by alternate-furrow irrigation with livestock wastewater reduces antibiotic resistance gene abundance in the rhizosphere but not in the non-rhizosphere
Cited by: 16
Author(s): Yuan Liu, Erping Cui, Andrew L. Neal, Xiaoxian Zhang, Zhongyang Li, Yatao Xiao, Zhenggang Du, Feng Gao, Xiucai Fan, Chao Hu
Software Mentions: 2
Published: over 7 years ago

10.3390/s21020329

BLE-Based Indoor Tracking System with Overlapping-Resistant IoT Solution for Tourism Applications
Cited by: 10
Author(s): Radosław Belka, Stanisław Deniziak, Grzegorz Łukawski, Paweł Pięta
Software Mentions: 2
Published: over 5 years ago

10.3390/foods9050595

Molecular Characterization and Enological Potential of A High Lactic Acid-Producing Lachancea thermotolerans Vineyard Strain
Cited by: 27
Author(s): Georgios Sgouros, Athanasios Mallouchos, Maria-Evangelia Filippousi, Georgios Banilas, Aspasia Nisiotou
Software Mentions: 2
Published: over 6 years ago

10.3389/fncel.2016.00152

A Novel Form of Compensation in the Tg2576 Amyloid Mouse Model of Alzheimer’s Disease
Cited by: 5
Author(s): Attila Somogyi, Zoltán Katonai, Alán Alpár, Ervin Wolf
Software Mentions: 2
Published: about 10 years ago

10.3390/toxics9050093

Total and Metabolically Active Microbial Community of Aerobic Granular Sludge Systems Operated in Sequential Batch Reactors: Effect of Pharmaceutical Compounds
Cited by: 7
Author(s): Barbara Muñoz-Palazón, Aurora Rosa-Masegosa, Miguel Hurtado-Martinez, Alejandro Rodríguez-Sánchez, Alexander Link, Ramiro Vílchez-Vargas, Alejandro González‐Martínez, José Manuel López López
Software Mentions: 2
Published: over 5 years ago

10.1186/s40168-020-00862-5

Syntrophic acetate oxidation replaces acetoclastic methanogenesis during thermophilic digestion of biowaste
Cited by: 97
Author(s): Stefan Dyksma, Lukas Jansen, Claudia Gallert
Software Mentions: 2
Published: about 6 years ago

10.3390/ph14030212

D-α-Tocopherol-Based Micelles for Successful Encapsulation of Retinoic Acid
Cited by: 24
Author(s): Guendalina Zuccari, Sara Baldassari, Silvana Alfei, Barbara Marengo, Giulia Elda Valenti, Cinzia Domenicotti, Giorgia Ailuno, Carla Villa, Leonardo Marchitto, Gabriele Caviglioli
Software Mentions: 2
Published: over 5 years ago

10.1186/s40168-018-0501-9

Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing
Cited by: 119
Author(s): Ramesh Pandit, Ankit T. Hinsu, Namrata Patel, Prakash G. Koringa, Subhash J. Jakhesara, Jalpa Thakkar, Tejas Shah, Georgina Limon, Androniki Psifidi, Javier Guitian, David Hume, Fiona M. Tomley, D. N. Rank, Muthusamy Raman, K.G. Tirumurugaan, Damer P. Blake, Chaitanya G. Joshi
Software Mentions: 2
Published: about 8 years ago

10.3389/fgene.2021.679162

Screening and Mapping for Head Blast Resistance in a Panel of CIMMYT and South Asian Bread Wheat Germplasm
Cited by: 15
Author(s): Xinyao He, Philomin Juliana, Muhammad Rezaul Kabir, Krishna Kanta Roy, Rabiul Islam, Félix Marza, Gary L. Peterson, Gyanendra Singh, Aakash Chawade, Arun Kumar Joshi, Ravi P. Singh, Pawan Kumar Singh
Software Mentions: 2
Published: over 5 years ago

10.1128/mSystems.01249-20

Insights into the Cultured Bacterial Fraction of Corals
Cited by: 40
Author(s): Michael Sweet, Helena Villela, Tina Keller‐Costa, Rodrigo Costa, Stefano Romano, David G. Bourne, Anny Cárdenas, Megan J. Huggett, Allison H. Kerwin, Felicity Kuek, Mónica Medina, Julie Meyer, Moritz Müller, F. Joseph Pollock, Michael S. Rappé, Mathieu G. Séré, Koty Sharp, Christian R. Voolstra, Nathan J Zaccardi, Maren Ziegler, Raquel S. Peixoto
Software Mentions: 2
Published: about 5 years ago

10.1007/s11356-021-12750-y

Does river channelization increase the abundance of invasive crayfish? Survey of Faxonius limosus in small Central European streams
Cited by: 1
Author(s): Maciej Bonk, Rafał Bobrek
Software Mentions: 2
Published: over 5 years ago

10.1186/s12864-015-1862-0

Lasting effects of early exposure to temperature on the gonadal transcriptome at the time of sex differentiation in the European sea bass, a fish with mixed genetic and environmental sex determination
Cited by: 66
Author(s): Noèlia Díaz, Francesc Piferrer
Software Mentions: 2
Published: about 11 years ago

10.1136/bmjopen-2016-013844

TAxonomy of Self-reported Sedentary behaviour Tools (TASST) framework for development, comparison and evaluation of self-report tools: content analysis and systematic review
Cited by: 40
Author(s): Philippa M. Dall, Elaine Coulter, Claire Fitzsimons, Dawn A. Skelton, Sébastien Chastin
Software Mentions: 2
Published: over 9 years ago

10.1111/jfb.14054

Impacts of acidification on brown troutSalmo truttapopulations and the contribution of stocking to population recovery and genetic diversity
Cited by: 9
Author(s): Paulo A. Prodöhl, A. Ferguson, Caroline Bradley, Robin Ade, Colin Roberts, E. J. Keay, Artur R. Costa, Rosaleen Hynes
Software Mentions: 2
Published: about 7 years ago

10.1002/mgg3.934

MtDNA polymorphism analyses in the Chinese Mongolian group: Efficiency evaluation and further matrilineal genetic structure exploration
Cited by: 11
Author(s): Qiong Lan, Ting Xie, Xiaoye Jin, Yingying Fang, Shuyan Mei, Guang Yang, Bofeng Zhu
Software Mentions: 2
Published: about 7 years ago

10.1186/s12898-018-0214-8

Transition of Ethiopian highland forests to agriculture-dominated landscapes shifts the soil microbial community composition
Cited by: 9
Author(s): Yoseph T. Delelegn, Witoon Purahong, Hans Sandén, Birru Yitaferu, Douglas L. Godbold, Tesfaye Wubet
Software Mentions: 2
Published: almost 8 years ago

10.1002/mnfr.201900403

A Two‐Week Treatment with Plant Extracts Changes Gut Microbiota, Caecum Metabolome, and Markers of Lipid Metabolism in ob/ob Mice
Cited by: 14
Author(s): Amandine Brochot, Vincent Azalbert, Jean‐François Landrier, Franck Tourniaire, Matteo Sérino
Software Mentions: 2
Published: about 7 years ago

10.1186/s13072-017-0165-x

Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning
Cited by: 17
Author(s): Gabriel Gutiérrez, Gonzalo Millán-Zambrano, Daniel A. Medina, Antonio Jordán-Pla, Jose E. Pérez-Ortı́n, Xenia Peñate, Sebastián Chávez
Software Mentions: 2
Published: almost 9 years ago

10.1093/jisesa/iev107

An Alien in the Group: Eusocial Male Bees Sharing Nonspecific Reproductive Aggregations
Cited by: 9
Author(s): Charles Fernando dos Santos, M. J. Ferreira-Caliman, Fábio Santos do Nascimento
Software Mentions: 2
Published: over 11 years ago

10.3897/mycokeys.61.38175

Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts
Cited by: 5
Author(s): Emilia Ossowska, Beata Guzow-Krzemińska, Marta Kolanowska, Katarzyna Szczepańska, Martin Kukwa
Software Mentions: 2
Published: over 6 years ago

10.1186/s12864-015-2340-4

Effect of roughage on rumen microbiota composition in the efficient feed converter and sturdy Indian Jaffrabadi buffalo (Bubalus bubalis)
Cited by: 37
Author(s): Neelam M. Nathani, Amrutlal K. Patel, Malathi Shekar, Bhaskar Reddy, S. V. Shah, Pravin M. Lunagaria, Ramesh Kothari, Chaitanya G. Joshi
Software Mentions: 2
Published: almost 11 years ago

10.7717/peerj.5883

A new microvertebrate assemblage from the Mussentuchit Member, Cedar Mountain Formation: insights into the paleobiodiversity and paleobiogeography of early Late Cretaceous ecosystems in western North America
Cited by: 14
Author(s): Haviv M. Avrahami, Terry A. Gates, Andrew B. Heckert, Peter J. Makovicky, Lindsay E. Zanno
Software Mentions: 2
Published: almost 8 years ago

10.3390/ani11040982

A Multi-Biomarker Approach in European Sea Bass Exposed to Dynamic Temperature Changes under Dietary Supplementation with Origanum vulgare Essential Oil
Cited by: 6
Author(s): Francesca Rita Dinardo, Aristide Maggiolino, Elisabetta Casalino, M. Deflorio, Gerardo Centoducati
Software Mentions: 2
Published: over 5 years ago

10.3390/ijms20164030

Dynamic Changes in Metabolite Accumulation and the Transcriptome during Leaf Growth and Development in Eucommia ulmoides
Cited by: 21
Author(s): Long Li, Minhao Liu, Kun Shi, Zhiying Yu, Ying Zhou, Ruishen Fan, Qianqian Shi
Software Mentions: 2
Published: about 7 years ago

10.3389/fgene.2021.676791

Day 7 Embryos Change the Proteomics and Exosomal Micro-RNAs Content of Bovine Uterine Fluid: Involvement of Innate Immune Functions
Cited by: 5
Author(s): Kaoru Kusama, Mohammad Bazlur Rashid, Rasoul Kowsar, Mohamed Ali Marey, Anup Kumar Talukder, Kentaro Nagaoka, M. Shimada, Hasan Khatib, Kazuhiko Imakawa, Akio Miyamoto
Software Mentions: 2
Published: about 5 years ago

10.7717/peerj.2600

Herbarium-based studies on taxonomy, biogeography and ecology ofPsilochilus(Orchidaceae)
Cited by: 0
Author(s): Marta Kolanowska, Aleksandra M. Naczk, Radomir Jaskuła
Software Mentions: 2
Published: almost 10 years ago

10.1186/s40168-020-00826-9

Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics
Cited by: 54
Author(s): Sanjie Cao, Weipeng Zhang, Wei Ding, Meng Wang, Shen Fan, Bo Yang, Andrew McMinn, Min Wang, Bin-Bin Xie, Qi‐Long Qin, Xiu-Lan Chen, Jianfeng He, Yuzhong Zhang
Software Mentions: 2
Published: over 6 years ago

10.1007/s00267-017-0833-4

Specific Vicariance of Two Primeval Lowland Forest Lichen Indicators
Cited by: 7
Author(s): Dariusz Kubiak, Piotr Osyczka
Software Mentions: 2
Published: over 9 years ago

10.1002/ece3.1828

Patterns of contact call differentiation in the panmictic East African Abyssinian White‐eye Z osterops abyssinicus (Aves: Passeriformes)
Cited by: 3
Author(s): Jan Christian Habel, Martin Husemann, Werner Ulrich
Software Mentions: 2
Published: almost 11 years ago

10.1002/ece3.5040

Different responses of avian feeding guilds to spatial and environmental factors across an elevation gradient in the central Himalaya
Cited by: 21
Author(s): Zhifeng Ding, Jiankun Liang, Yiming Hu, Zhixin Zhou, Sun Hongbin, Lina Liu, Haijun Liu, Huijian Hu, Xingfeng Si
Software Mentions: 2
Published: over 7 years ago

10.1002/ece3.3074

Dampening of population cycles in voles affects small mammal community structure, decreases diversity, and increases prevalence of a zoonotic disease
Cited by: 21
Author(s): Frauke Ecke, David G. Angeler, Магнус Магнуссон, Hussein Khalil, Birger Hörnfeldt
Software Mentions: 2
Published: over 9 years ago

10.1186/s12864-020-07333-z

Nutrient-imbalanced conditions shift the interplay between zooplankton and gut microbiota
Cited by: 4
Author(s): Yingdong Li, Zhimeng Xu, Hongbin Liu
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2014.00105

Stormwater runoff drives viral community composition changes in inland freshwaters
Cited by: 25
Author(s): Kurt E. Williamson, Jamie V. Harris, Jasmin C. Green, Faraz Rahman, Randolph M. Chambers
Software Mentions: 2
Published: over 12 years ago

10.1186/s13567-016-0333-1

The microbiome associated with equine periodontitis and oral health
Cited by: 56
Author(s): Rebekah C. Kennedy, David F. Lappin, Padraic Dixon, Mark J. Buijs, Egija Zaura, Wim Crielaard, Lindsay E. O’Donnell, David Bennett, Bernd W. Brandt, Marcello P. Riggio
Software Mentions: 2
Published: over 10 years ago

10.1002/ece3.6504

Hidden diversity in Antarctica: Molecular and morphological evidence of two different species within one of the most conspicuous ascidian species
Cited by: 6
Author(s): Micaela Ruiz, Anabela Taverna, Natalia Servetto, Ricardo Sahade, Christoph Held
Software Mentions: 2
Published: about 6 years ago

10.1002/ece3.6762

Genetic diversity, population structure, and gene flow analysis of lowland bamboo [Oxytenanthera abyssinica (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: almost 6 years ago

10.1002/ece3.2220

Leaf litter arthropod responses to tropical forest restoration
Cited by: 54
Author(s): Rebecca J. Cole, Karen D. Holl, Rakan A. Zahawi, Philipp Wickey, Alan R. Townsend
Software Mentions: 2
Published: about 10 years ago

10.1007/s10661-017-6135-8

Trace element concentrations in livers of Common Buzzards Buteo buteo from eastern Poland
Cited by: 5
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak, Grzegorz Pitucha
Software Mentions: 2
Published: about 9 years ago

10.3389/fimmu.2018.01996

Identification of Distinct Unmutated Chronic Lymphocytic Leukemia Subsets in Mice Based on Their T Cell Dependency
Cited by: 7
Author(s): Simar Pal Singh, Marjolein J. W. de Bruijn, Mariana P. de Almeida, Ruud W. J. Meijers, Lars Nitschke, Anton W. Langerak, Saravanan Y. Pillai, Ralph Stadhouders, Rudolf W. Hendriks
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep27234

Glacial melting: an overlooked threat to Antarctic krill
Cited by: 40
Author(s): Verónica Fuentes, Gastón Alurralde, Bettina Meyer, Gastón E. Aguirre, Antonio Canepa, Anne-Cathrin Wölfl, Christian Hass, Gabriela Noemí Williams, Irene R Schloss
Software Mentions: 2
Published: over 10 years ago

10.1002/mbo3.828

Experimental evaluation on the applicability of necrobiome analysis in forensic veterinary science
Cited by: 9
Author(s): Fabiola Tuccia, Emad Zurgani, Sara Bortolini, Stefano Vanin
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.2696

Historical reconstruction of climatic and elevation preferences and the evolution of cloud forest-adapted tree ferns in Mesoamerica
Cited by: 21
Author(s): Victoria Sosa, Juan Francisco Ornelas, Santiago Ramírez‐Barahona, Etelvina Gándara
Software Mentions: 2
Published: almost 10 years ago

10.1002/mbo3.230

Characterizing the diversity of active bacteria in soil by comprehensive stable isotope probing of DNA and RNA with H 2 18 O
Cited by: 19
Author(s): Elizabeth A. Rettedal, Volker S. Brözel
Software Mentions: 2
Published: over 11 years ago

10.7717/peerj.5210

Spatial and temporal variations of aridity shape dung beetle assemblages towards the Sahara desert
Cited by: 8
Author(s): Indradatta deCastro‐Arrazola, Joaquín Hortal, Marco Moretti, Francisco Sánchez‐Piñero
Software Mentions: 2
Published: almost 8 years ago

10.7717/peerj.2059

Geometric morphometric analysis of intratrackway variability: a case study on theropod and ornithopod dinosaur trackways from Münchehagen (Lower Cretaceous, Germany)
Cited by: 38
Author(s): Jens N. Lallensack, Anneke H. van Heteren, Oliver Wings
Software Mentions: 2
Published: over 10 years ago

10.1002/ece3.2714

Does thinning-induced gap size result in altered soil microbial community in pine plantation in eastern Tibetan Plateau?
Cited by: 31
Author(s): Bing Yang, Xiaoyun Pang, Bin Hu, Weikai Bao, Guangming Tian
Software Mentions: 2
Published: over 9 years ago

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