Projects: bioconductor: PAST

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAST

Pathway Association Study Tool (PAST)
1 version
Latest release: over 2 years ago
4,613 downloads total

Enhanced Analysis
Repository Activity:
Repository Owner: IGBB (organization)
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses

Very Likely Science (100)

Papers Mentioning PAST 2,336

10.3390/microorganisms8040581
Effect of Inoculum Pretreatment on the Composition of Microbial Communities in Anaerobic Digesters Producing Volatile Fatty Acids
Cited by: 26
Author(s): Lucía Blasco, Minna Kahala, Elina Tampio, Markku Vainio, Satu Ervasti, Saija Rasi
Software Mentions: 2
Published: about 6 years ago
10.1186/s12889-018-6329-1
Criterion validity and test-retest reliability of SED-GIH, a single item question for assessment of daily sitting time
Cited by: 13
Author(s): Kristina Larsson, Lena Kallings, Örjan Ekblom, Victoria Blom, Eva Andersson, Maria Ekblom
Software Mentions: 2
Published: over 7 years ago
10.1186/s12866-020-1717-y
Diversity and geographic distribution of soil streptomycetes with antagonistic potential against actinomycetoma-causing Streptomyces sudanensis in Sudan and South Sudan
Cited by: 9
Author(s): Mohamed E. Hamid, Thomas Reitz, Martin R.P. Joseph, Kerstin Hommel, Adil Mahgoub, Mogahid M. Elhassan, François Buscot, Mika Tarkka
Software Mentions: 2
Published: over 6 years ago
10.1007/s00244-017-0481-y
Factors Affecting Element Concentrations in Eggshells of Three Sympatrically Nesting Waterbirds in Northern Poland
Cited by: 3
Author(s): Ignacy Kitowski, Dariusz Jakubas, Piotr Indykiewicz, Dariusz Wiącek
Software Mentions: 2
Published: over 8 years ago
10.3390/microorganisms7110518
Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem
Cited by: 11
Author(s): Despoina Vokou, Savvas Genitsaris, Katerina Karamanoli, Katerina Vareli, Marina Zachari, Despoina Voggoli, Nikolaos Monokrousos, John M. Halley, Ioannis Sainis
Software Mentions: 2
Published: over 6 years ago
10.3389/fpls.2018.00463
Forest Soil Phosphorus Resources and Fertilization Affect Ectomycorrhizal Community Composition, Beech P Uptake Efficiency, and Photosynthesis
Cited by: 43
Author(s): Aljoša Zavišić, Nan Yang, Sven Marhan, Ellen Kandeler, Andrea Polle
Software Mentions: 2
Published: about 8 years ago
10.3389/fpls.2014.00806
Genetic diversity in aspen and its relation to arthropod abundance
Cited by: 6
Author(s): Chunxia Zhang, Barbara Vornam, Katharina Volmer, Kathleen Prinz, Frauke Kleemann, Lars Köhler, Andrea Polle, Reiner Finkeldey
Software Mentions: 2
Published: over 11 years ago
10.3389/fnut.2021.590978
Mainstreaming Local Food Species for Nutritional and Livelihood Security: Insights From Traditional Food Systems of Adi Community of Arunachal Pradesh, India
Cited by: 3
Author(s): Ranjay K. Singh, Rakesh Bhardwaj, Anamika Singh, Temin Payum, Kumar Arvind, Anshuman Singh, L. Wangchu, Sanjay Kumar Upadhyay
Software Mentions: 2
Published: almost 5 years ago
10.3390/microorganisms9061214
Gut Microbiota Dynamics in Natural Populations of Pintomyia evansi under Experimental Infection with Leishmania infantum
Cited by: 4
Author(s): Rafael José Vivero, Víctor Alfonso Castañeda-Monsalve, Lupe Romero, Gregory D. D. Hurst, Gloria Cadavid-Restrepo, Claudia Ximena Moreno Herrera
Software Mentions: 2
Published: about 5 years ago
10.1186/s13568-019-0770-0
Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus
Cited by: 13
Author(s): Wei Feng, Jing Zhang, Ivan Jakovlić, Fan Xiong, Shangong Wu, Hong Zou, Wenxiang Li, Ming Li, Guitang Wang
Software Mentions: 2
Published: about 7 years ago
10.3389/fpls.2016.01619
Gene-Metabolite Networks of Volatile Metabolism in Airen and Tempranillo Grape Cultivars Revealed a Distinct Mechanism of Aroma Bouquet Production
Cited by: 34
Author(s): José L. Rambla, Almudena Trapero-Mozos, Gianfranco Diretto, Ángela Rubio-Moraga, Antonio Granell, Lourdes Gómez-Gómez, Oussama Ahrazem
Software Mentions: 2
Published: over 9 years ago
10.3390/insects8030064
Monitoring Effect of Fire on Ant Assemblages in Brazilian Rupestrian Grasslands: Contrasting Effects on Ground and Arboreal Fauna
Cited by: 13
Author(s): Diego V. Anjos, Ricardo I. Campos, Renata Bernardes Faria Campos, Sérvio Pontes Ribeiro
Software Mentions: 2
Published: almost 9 years ago
10.1038/s41598-019-53346-4
Multi-technique comparison of atherogenic and MCD NASH models highlights changes in sphingolipid metabolism
Cited by: 29
Author(s): Sophie A. Montandon, Emmanuel Somm, Ursula Loizides‐Mangold, Claudio De Vito, Charna Dibner, François R. Jornayvaz
Software Mentions: 2
Published: over 6 years ago
10.1038/s41598-019-53073-w
Microbial changes in relation to oral mucositis in autologous hematopoietic stem cell transplantation recipients
Cited by: 31
Author(s): Alexa M. G. A. Laheij, Judith E. Raber-Durlacher, Renée G. A. Koppelmans, Marie-Charlotte D.N.J.M. Huysmans, Carin Potting, Stephanie J. M. van Leeuwen, Mette D. Hazenberg, Michael T. Brennan, Inger von Bültzingslöwen, Jan‐Erik Johansson, J.J. de Soet, Thijs M. Haverman, Mark J. Buijs, Bernd W. Brandt, F.R. Rozema, Nicole M. A. Blijlevens, Egija Zaura
Software Mentions: 2
Published: over 6 years ago
10.3390/microorganisms8060942
Uncovered Microbial Diversity in Antarctic Cryptoendolithic Communities Sampling Three Representative Locations of the Victoria Land
Cited by: 10
Author(s): Claudia Coleine, Nuttapon Pombubpa, Laura Zucconi, Silvano Onofri, Benedetta Turchetti, Pietro Buzzini, Jason E. Stajich, Laura Selbmann
Software Mentions: 2
Published: almost 6 years ago
10.1186/2046-9063-10-11
Benthic infaunal community structuring in an acidified tropical estuarine system
Cited by: 15
Author(s): M. Belal Hossain, David J. Marshall
Software Mentions: 2
Published: over 12 years ago
10.3389/fmicb.2017.00608
Inbred Mouse Populations Exhibit Intergenerational Changes in Intestinal Microbiota Composition and Function Following Introduction to a Facility
Cited by: 16
Author(s): Jocelyn M. Choo, Paul J. Trim, Lex E. X. Leong, Guy C. J. Abell, Carly Brune, Nicole Jeffries, Steven Wesselingh, T. Neil Dear, Marten F. Snel, Geraint B. Rogers
Software Mentions: 2
Published: about 9 years ago
10.3390/microorganisms8091387
Both Soil Bacteria and Soil Chemical Property Affected the Micropredator Myxobacterial Community: Evidence from Natural Forest Soil and Greenhouse Rhizosphere Soil
Cited by: 6
Author(s): Zhihui Yang, Xianjiao Zhang, Qing Yao, Honghui Zhu
Software Mentions: 2
Published: over 5 years ago
10.3390/microorganisms8010058
A Deeper Look into the Biodiversity of the Extremely Acidic Copahue volcano-Río Agrio System in Neuquén, Argentina
Cited by: 9
Author(s): Germán López Bedogni, Francisco Luis Massello, Alejandra Giaveno, Edgardo R. Donati, María Sofía Urbieta
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2016.01046
Populations of Stored Product Mite Tyrophagus putrescentiae Differ in Their Bacterial Communities
Cited by: 35
Author(s): Tomáš Erban, Pavel B. Klimov, Jaroslav Smrž, Thomas W. Phillips, Marta Nešvorná, Jan Kopecký, Jan Hubert
Software Mentions: 2
Published: almost 10 years ago
10.1186/s12917-021-02841-w
Blood cultures and blood microbiota analysis as surrogates for bronchoalveolar lavage fluid analysis in dogs with bacterial pneumonia
Cited by: 5
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: about 5 years ago
10.3389/fmicb.2015.01166
Taxonomic and functional characteristics of microbial communities and their correlation with physicochemical properties of four geothermal springs in Odisha, India
Cited by: 57
Author(s): Jhasketan Badhai, Tarini Shankar Ghosh, Subrata K. Das
Software Mentions: 2
Published: over 10 years ago
10.3389/fmicb.2019.01209
Effect of Re-acidification on Buffalo Grass Rhizosphere and Bulk Microbial Communities During Phytostabilization of Metalliferous Mine Tailings
Cited by: 23
Author(s): Linnea K. Honeker, Catherine F. Gullo, Julia W. Neilson, Jon Chorover, Raina M. Maier
Software Mentions: 2
Published: about 7 years ago
10.3389/fmicb.2016.00536
Investigation of the Activity of the Microorganisms in a Reblochon-Style Cheese by Metatranscriptomic Analysis
Cited by: 46
Author(s): Christophe Monnet, Éric Dugat-Bony, Dominique Swennen, Jean-Marie Beckerich, Françoise Irlinger, Sébastien Fraud, Pascal Bonnarme
Software Mentions: 2
Published: about 10 years ago
10.1136/bmjopen-2016-013844
TAxonomy of Self-reported Sedentary behaviour Tools (TASST) framework for development, comparison and evaluation of self-report tools: content analysis and systematic review
Cited by: 40
Author(s): Philippa M. Dall, Elaine Coulter, Claire Fitzsimons, Dawn A. Skelton, Sébastien Chastin
Software Mentions: 2
Published: about 9 years ago
10.3389/fmicb.2017.00245
Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments
Cited by: 44
Author(s): Julio Bohórquez, Terry J. McGenity, Sokratis Papaspyrou, Emilio García‐Robledo, Alfonso Corzo, Graham J. C. Underwood
Software Mentions: 2
Published: over 9 years ago
10.1002/mgg3.934
MtDNA polymorphism analyses in the Chinese Mongolian group: Efficiency evaluation and further matrilineal genetic structure exploration
Cited by: 11
Author(s): Qiong Lan, Ting Xie, Xiaoye Jin, Yingying Fang, Shuyan Mei, Guang Yang, Bofeng Zhu
Software Mentions: 2
Published: almost 7 years ago
10.1186/s12898-018-0214-8
Transition of Ethiopian highland forests to agriculture-dominated landscapes shifts the soil microbial community composition
Cited by: 9
Author(s): Yoseph T. Delelegn, Witoon Purahong, Hans Sandén, Birru Yitaferu, Douglas L. Godbold, Tesfaye Wubet
Software Mentions: 2
Published: over 7 years ago
10.1002/mnfr.201900403
A Two‐Week Treatment with Plant Extracts Changes Gut Microbiota, Caecum Metabolome, and Markers of Lipid Metabolism in ob/ob Mice
Cited by: 14
Author(s): Amandine Brochot, Vincent Azalbert, Jean‐François Landrier, Franck Tourniaire, Matteo Sérino
Software Mentions: 2
Published: almost 7 years ago
10.3389/fmicb.2020.01352
Galactooligosaccharides and Resistant Starch Altered Microbiota and Short-Chain Fatty Acids in an in vitro Fermentation Study Using Gut Contents of Mud Crab (Scylla paramamosain)
Cited by: 19
Author(s): Ngoc Tuan Tran, Yong Tang, Zhongzhen Li, Ming Zou, Xiaobo Wen, Hongyu Ma, Shengkang Li
Software Mentions: 2
Published: almost 6 years ago
10.3389/fmicb.2014.00786
Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea
Cited by: 33
Author(s): Carlo Berg, Luisa Listmann, Verona Vandieken, Angela Vogts, Klaus Jürgens
Software Mentions: 2
Published: over 11 years ago
10.3389/fmicb.2017.00574
Characterization of Unexplored Deadwood Mycobiome in Highly Diverse Subtropical Forests Using Culture-independent Molecular Technique
Cited by: 30
Author(s): Witoon Purahong, Katherina A. Pietsch, Guillaume Lentendu, Ricardo Schöps, Helge Bruelheide, Christian Wirth, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-020-79102-7
Selenization of S. cerevisiae increases its protective potential in experimental autoimmune encephalomyelitis by triggering an intestinal immunomodulatory loop
Cited by: 4
Author(s): Thais Fernanda de Campos Fraga-Silva, Luiza Ayumi Nishiyama Mimura, Larissa Ragozo Cardoso de Oliveira, Juliana Helena dos Santos de Toledo, Patrícia Aparecida Borim, Sofia Fernanda Gonçalves Zorzella-Pezavento, Diego Peres Alonso, Paulo Eduardo Martins Ribolla, Carlos Alberto Ferreira de Oliveira, Denise Morais da Fonseca, Eduardo J. Villablanca, Alexandrina Sartori
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2018.00423
Halotolerant Exiguobacterium profundum PHM11 Tolerate Salinity by Accumulating L-Proline and Fine-Tuning Gene Expression Profiles of Related Metabolic Pathways
Cited by: 21
Author(s): Vikas Patel, R. P. Srivastava, Anjney Sharma, Anchal Srivastava, Surinder Singh, Alok Kumar Srivastava, Prem Lal Kashyap, Hillol Chakdar, Kurinji Pandiyan, Alok Kalra, Anil Kumar Saxena
Software Mentions: 2
Published: about 8 years ago
10.3390/plants9060790
Mitigation of the Adverse Effects of the El Niño (El Niño, La Niña) Southern Oscillation (ENSO) Phenomenon and the Most Important Diseases in Avocado cv. Hass Crops
Cited by: 8
Author(s): Joaquín Guillermo Ramírez‐Gil, Juan Camilo Henao-Rojas, Juan Gonzalo Morales Osorio
Software Mentions: 2
Published: almost 6 years ago
10.3389/fmicb.2019.01712
Indigenous Yeast Interactions in Dual-Starter Fermentations May Improve the Varietal Expression of Moschofilero Wine
Cited by: 19
Author(s): Aspasia Nisiotou, Athanasios Mallouchos, Chrysoula C. Tassou, Georgios Banilas
Software Mentions: 2
Published: almost 7 years ago
10.1186/s40168-020-00810-3
Lung function and microbiota diversity in cystic fibrosis
Cited by: 115
Author(s): Leah Cuthbertson, Alan W. Walker, Anna Oliver, Geraint B. Rogers, Damian W. Rivett, Thomas H. Hampton, Alix Ashare, J. Stuart Elborn, Anthony De Soyza, Mary Carroll, Lucas R. Hoffman, Clare Lanyon, Samuel M. Moskowitz, George A. O’Toole, Julian Parkhill, Paul J. Planet, Charlotte C. Tenebäck, Michael Tunney, Jonathan B. Zuckerman, Kenneth D. Bruce, Christopher J. van der Gast
Software Mentions: 2
Published: about 6 years ago
10.1007/s11103-015-0368-0
Tissue culture-induced genetic and epigenetic variation in triticale (× Triticosecale spp. Wittmack ex A. Camus 1927) regenerants
Cited by: 50
Author(s): Joanna Machczyńska, J. Zimny, Piotr Tomasz Bednarek
Software Mentions: 2
Published: almost 11 years ago
10.3389/fmicb.2016.01341
Bacterial Abilities and Adaptation Toward the Rhizosphere Colonization
Cited by: 59
Author(s): Lucas Dantas Lopes, Michele de Cássia Pereira e Silva, Fernando Dini Andreote
Software Mentions: 2
Published: almost 10 years ago
10.3389/fmicb.2017.00593
Microbial and Isotopic Evidence for Methane Cycling in Hydrocarbon-Containing Groundwater from the Pennsylvania Region
Cited by: 26
Author(s): Adrien Vigneron, Andrew N. Bishop, Eric Alsop, Kellie Hull, Ileana Rhodes, R. C. Hendricks, Ian M. Head, Nicolas Tsesmetzis
Software Mentions: 2
Published: about 9 years ago
10.3389/fmicb.2016.01612
Interactions between Obesity Status and Dietary Intake of Monounsaturated and Polyunsaturated Oils on Human Gut Microbiome Profiles in the Canola Oil Multicenter Intervention Trial (COMIT)
Cited by: 60
Author(s): Shuaihua Pu, Hamidreza Khazanehei, Peter J H Jones, Ehsan Khafipour
Software Mentions: 2
Published: over 9 years ago
10.1186/s40168-018-0587-0
Estrogen-mediated gut microbiome alterations influence sexual dimorphism in metabolic syndrome in mice
Cited by: 128
Author(s): Kanakaraju Kaliannan, Ruairi C. Robertson, Kiera Murphy, Catherine Stanton, Chao Kang, Bin Wang, Lei Hao, Atul K. Bhan, Jing Kang
Software Mentions: 2
Published: over 7 years ago
10.3389/fmicb.2017.01231
Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
Cited by: 26
Author(s): Yiseul Kim, William Van Bonn, Tiong Gim Aw, Joan B. Rose
Software Mentions: 2
Published: almost 9 years ago
10.1038/s41598-021-95814-w
Intra- and interspecific variability among congeneric Pagellus otoliths
Cited by: 27
Author(s): Claudio D’Iglio, Marco Albano, Sergio Famulari, Serena Savoca, Giuseppe Panarello, Davide Di Paola, Anna Perdichizzi, Paola Rinelli, Giovanni Lanteri, Nunziacarla Spanò, Gioele Capillo
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-021-98680-8
Soil microbiota and microarthropod communities in oil contaminated sites in the European Subarctic
Cited by: 8
Author(s): Elena N. Melekhina, Elena S. Belykh, М. Ю. Маркарова, А. А. Таскаева, Е. Е. Расова, О. А. Батурина, Мarsel R. Kabilov, Ilya O. Velegzhaninov
Software Mentions: 2
Published: over 4 years ago
10.1186/s13567-016-0333-1
The microbiome associated with equine periodontitis and oral health
Cited by: 56
Author(s): Rebekah C. Kennedy, David F. Lappin, Padraic Dixon, Mark J. Buijs, Egija Zaura, Wim Crielaard, Lindsay E. O’Donnell, David Bennett, Bernd W. Brandt, Marcello P. Riggio
Software Mentions: 2
Published: about 10 years ago
10.3389/fmicb.2016.00666
Superimposed Pristine Limestone Aquifers with Marked Hydrochemical Differences Exhibit Distinct Fungal Communities
Cited by: 19
Author(s): Ali Nawaz, Witoon Purahong, Robert Lehmann, Martina Herrmann, Kirsten Küsel, Kai Uwe Totsche, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: about 10 years ago
10.1186/s40168-021-01022-z
Opportunistic bacteria with reduced genomes are effective competitors for organic nitrogen compounds in coastal dinoflagellate blooms
Cited by: 21
Author(s): Han Yu, Nianzhi Jiao, Yao Zhang, Fan Zhang, Chen He, Xuejiao Liang, Ruanhong Cai, Quan Shi
Software Mentions: 2
Published: about 5 years ago
10.1007/s00122-017-2882-8
Discovery and characterization of two new stem rust resistance genes in Aegilops sharonensis
Cited by: 24
Author(s): Guotai Yu, Nicolas Champouret, Burkhard Steuernagel, Pablo D. Olivera, Jamie Simmons, Cole Williams, Ryan C. Johnson, Matthew J. Moscou, Inmaculada Hernández-Pinzón, Phon Green, Hanan Sela, E. Millet, Jonathan D. G. Jones, Eric Ward, Brian J. Steffenson, Brande B. H. Wulff
Software Mentions: 2
Published: about 9 years ago
10.3390/toxics9050093
Total and Metabolically Active Microbial Community of Aerobic Granular Sludge Systems Operated in Sequential Batch Reactors: Effect of Pharmaceutical Compounds
Cited by: 7
Author(s): Barbara Muñoz-Palazón, Aurora Rosa-Masegosa, Miguel Hurtado-Martinez, Alejandro Rodríguez-Sánchez, Alexander Link, Ramiro Vílchez-Vargas, Alejandro González‐Martínez, José Manuel López López
Software Mentions: 2
Published: about 5 years ago
10.3389/fmicb.2019.02969
Forage Rotations Conserve Diversity of Arbuscular Mycorrhizal Fungi and Soil Fertility
Cited by: 26
Author(s): Elisa Pellegrino, Hannes A. Gamper, Valentina Ciccolini, Laura Ercoli
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2019.00171
Modulation of Intestinal Microbiota in Solea senegalensis Fed Low Dietary Level of Ulva ohnoi
Cited by: 24
Author(s): Silvana Tapia‐Paniagua, Milena Fumanal, Victoria Anguís, Catalina Fernández‐Díaz, Francisco Javier Alarcón, Miguel A. Moriñigo, M.C. Balebona
Software Mentions: 2
Published: over 7 years ago
10.3390/v10120672
Communities of Phytoplankton Viruses across the Transition Zone of the St. Lawrence Estuary
Cited by: 5
Author(s): Myriam Labbé, Frédéric Raymond, Alice V. Lévesque, Mary Thaler, Vani Mohit, Martyne Audet, Jacques Corbeil, Alexander I. Culley
Software Mentions: 2
Published: over 7 years ago
10.3389/fcimb.2021.629723
The Oral Microbiome in Periodontal Health
Cited by: 41
Author(s): Magdalena Lenartova, Barbora Tesinska, Taťjana Janatová, Ondrej Hrebicek, Jaroslav Myšák, Jiřı́ Janata, Lucie Najmanová
Software Mentions: 2
Published: about 5 years ago
10.3390/foods9050595
Molecular Characterization and Enological Potential of A High Lactic Acid-Producing Lachancea thermotolerans Vineyard Strain
Cited by: 27
Author(s): Georgios Sgouros, Athanasios Mallouchos, Maria-Evangelia Filippousi, Georgios Banilas, Aspasia Nisiotou
Software Mentions: 2
Published: about 6 years ago
10.3389/fncel.2016.00152
A Novel Form of Compensation in the Tg2576 Amyloid Mouse Model of Alzheimer’s Disease
Cited by: 5
Author(s): Attila Somogyi, Zoltán Katonai, Alán Alpár, Ervin Wolf
Software Mentions: 2
Published: almost 10 years ago
10.1186/s40168-020-00862-5
Syntrophic acetate oxidation replaces acetoclastic methanogenesis during thermophilic digestion of biowaste
Cited by: 97
Author(s): Stefan Dyksma, Lukas Jansen, Claudia Gallert
Software Mentions: 2
Published: almost 6 years ago
10.3390/ph14030212
D-α-Tocopherol-Based Micelles for Successful Encapsulation of Retinoic Acid
Cited by: 24
Author(s): Guendalina Zuccari, Sara Baldassari, Silvana Alfei, Barbara Marengo, Giulia Elda Valenti, Cinzia Domenicotti, Giorgia Ailuno, Carla Villa, Leonardo Marchitto, Gabriele Caviglioli
Software Mentions: 2
Published: over 5 years ago
10.1007/s11274-020-2806-7
Preparation and characterization of site-specific dechlorinating microbial inocula capable of complete dechlorination enriched in anaerobic microcosms amended with clay mineral
Cited by: 4
Author(s): Zsuzsanna Nagymáté, Laura Jurecska, Csaba Romsics, Ferenc Tóth, Viktória Bódai, Éva Mészáros, Attila Szabó, Balázs Erdélyi, Károly Màrialigeti
Software Mentions: 2
Published: over 6 years ago
10.1242/bio.045674
The ventral epithelium of <i>Trichoplax adhaerens</i> deploys in distinct patterns cells that secrete digestive enzymes, mucus or diverse neuropeptides
Cited by: 24
Author(s): Tatiana D. Mayorova, Katherine Hammar, Christine A. Winters, Thomas S. Reese, Carolyn L. Smith
Software Mentions: 2
Published: over 7 years ago
10.1186/s12862-016-0836-4
Discrete phenotypes are not underpinned by genome-wide genetic differentiation in the squat lobster Munida gregaria (Crustacea: Decapoda: Munididae): a multi-marker study covering the Patagonian shelf
Cited by: 6
Author(s): Chen Wang, Shobhit Agrawal, Jürgen Laudien, Vreni Häussermann, Christoph Held
Software Mentions: 2
Published: over 9 years ago
10.3897/zookeys.140.1925
Triteleia peyerimhoffi comb. n., a remarkably variable circum-Mediterranean scelionid (Hymenoptera, Platygastroidea)
Cited by: 5
Author(s): Ovidiu Alin Popovici, Ferdinando Bin, Lubomír Masner, M. Popovici, David G. Notton
Software Mentions: 2
Published: over 14 years ago
10.1186/s40168-018-0501-9
Microbial diversity and community composition of caecal microbiota in commercial and indigenous Indian chickens determined using 16s rDNA amplicon sequencing
Cited by: 119
Author(s): Ramesh Pandit, Ankit T. Hinsu, Namrata Patel, Prakash G. Koringa, Subhash J. Jakhesara, Jalpa Thakkar, Tejas Shah, Georgina Limon, Androniki Psifidi, Javier Guitian, David Hume, Fiona M. Tomley, D. N. Rank, Muthusamy Raman, K.G. Tirumurugaan, Damer P. Blake, Chaitanya G. Joshi
Software Mentions: 2
Published: almost 8 years ago
10.3390/ijerph18168268
Application of Multivariate Statistical Techniques and Water Quality Index for the Assessment of Water Quality and Apportionment of Pollution Sources in the Yeongsan River, South Korea
Cited by: 12
Author(s): Mamun, Kwang-Guk An
Software Mentions: 2
Published: almost 5 years ago
10.3389/fgene.2021.679162
Screening and Mapping for Head Blast Resistance in a Panel of CIMMYT and South Asian Bread Wheat Germplasm
Cited by: 15
Author(s): Xinyao He, Philomin Juliana, Muhammad Rezaul Kabir, Krishna Kanta Roy, Rabiul Islam, Félix Marza, Gary L. Peterson, Gyanendra Singh, Aakash Chawade, Arun Kumar Joshi, Ravi P. Singh, Pawan Kumar Singh
Software Mentions: 2
Published: about 5 years ago
10.7554/eLife.04147
Decoding odor quality and intensity in the Drosophila brain
Cited by: 130
Author(s): Antonia Strutz, Jan Soelter, Amelie Baschwitz, Abu Farhan, Veit Grabe, Jürgen Rybak, Markus Knaden, Michael Schmuker, Bill S. Hansson, Silke Sachse
Software Mentions: 2
Published: over 11 years ago
10.1007/s11356-021-12750-y
Does river channelization increase the abundance of invasive crayfish? Survey of Faxonius limosus in small Central European streams
Cited by: 1
Author(s): Maciej Bonk, Rafał Bobrek
Software Mentions: 2
Published: over 5 years ago
10.1186/s12864-015-1862-0
Lasting effects of early exposure to temperature on the gonadal transcriptome at the time of sex differentiation in the European sea bass, a fish with mixed genetic and environmental sex determination
Cited by: 66
Author(s): Noèlia Díaz, Francesc Piferrer
Software Mentions: 2
Published: over 10 years ago
10.1186/s13072-017-0165-x
Subtracting the sequence bias from partially digested MNase-seq data reveals a general contribution of TFIIS to nucleosome positioning
Cited by: 17
Author(s): Gabriel Gutiérrez, Gonzalo Millán-Zambrano, Daniel A. Medina, Antonio Jordán-Pla, Jose E. Pérez-Ortı́n, Xenia Peñate, Sebastián Chávez
Software Mentions: 2
Published: over 8 years ago
10.3390/microorganisms8081245
Ibuprofen Degradation and Associated Bacterial Communities in Hyporheic Zone Sediments
Cited by: 22
Author(s): Cyrus Rutere, Kirsten Knoop, Malte Posselt, Adrian Ho, Marcus A. Horn
Software Mentions: 2
Published: almost 6 years ago
10.1186/s12864-015-2340-4
Effect of roughage on rumen microbiota composition in the efficient feed converter and sturdy Indian Jaffrabadi buffalo (Bubalus bubalis)
Cited by: 37
Author(s): Neelam M. Nathani, Amrutlal K. Patel, Malathi Shekar, Bhaskar Reddy, S. V. Shah, Pravin M. Lunagaria, Ramesh Kothari, Chaitanya G. Joshi
Software Mentions: 2
Published: over 10 years ago
10.7717/peerj.5883
A new microvertebrate assemblage from the Mussentuchit Member, Cedar Mountain Formation: insights into the paleobiodiversity and paleobiogeography of early Late Cretaceous ecosystems in western North America
Cited by: 14
Author(s): Haviv M. Avrahami, Terry A. Gates, Andrew B. Heckert, Peter J. Makovicky, Lindsay E. Zanno
Software Mentions: 2
Published: over 7 years ago
10.3390/ani11040982
A Multi-Biomarker Approach in European Sea Bass Exposed to Dynamic Temperature Changes under Dietary Supplementation with Origanum vulgare Essential Oil
Cited by: 6
Author(s): Francesca Rita Dinardo, Aristide Maggiolino, Elisabetta Casalino, M. Deflorio, Gerardo Centoducati
Software Mentions: 2
Published: about 5 years ago
10.3389/fgene.2021.676791
Day 7 Embryos Change the Proteomics and Exosomal Micro-RNAs Content of Bovine Uterine Fluid: Involvement of Innate Immune Functions
Cited by: 5
Author(s): Kaoru Kusama, Mohammad Bazlur Rashid, Rasoul Kowsar, Mohamed Ali Marey, Anup Kumar Talukder, Kentaro Nagaoka, M. Shimada, Hasan Khatib, Kazuhiko Imakawa, Akio Miyamoto
Software Mentions: 2
Published: almost 5 years ago
10.7717/peerj.2600
Herbarium-based studies on taxonomy, biogeography and ecology ofPsilochilus(Orchidaceae)
Cited by: 0
Author(s): Marta Kolanowska, Aleksandra M. Naczk, Radomir Jaskuła
Software Mentions: 2
Published: over 9 years ago
10.1186/s40168-020-00826-9
Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics
Cited by: 54
Author(s): Sanjie Cao, Weipeng Zhang, Wei Ding, Meng Wang, Shen Fan, Bo Yang, Andrew McMinn, Min Wang, Bin-Bin Xie, Qi‐Long Qin, Xiu-Lan Chen, Jianfeng He, Yuzhong Zhang
Software Mentions: 2
Published: about 6 years ago
10.1007/s00267-017-0833-4
Specific Vicariance of Two Primeval Lowland Forest Lichen Indicators
Cited by: 7
Author(s): Dariusz Kubiak, Piotr Osyczka
Software Mentions: 2
Published: over 9 years ago
10.1002/ece3.1828
Patterns of contact call differentiation in the panmictic East African Abyssinian White‐eye Z osterops abyssinicus (Aves: Passeriformes)
Cited by: 3
Author(s): Jan Christian Habel, Martin Husemann, Werner Ulrich
Software Mentions: 2
Published: over 10 years ago
10.1002/ece3.5040
Different responses of avian feeding guilds to spatial and environmental factors across an elevation gradient in the central Himalaya
Cited by: 21
Author(s): Zhifeng Ding, Jiankun Liang, Yiming Hu, Zhixin Zhou, Sun Hongbin, Lina Liu, Haijun Liu, Huijian Hu, Xingfeng Si
Software Mentions: 2
Published: about 7 years ago
10.1002/ece3.3074
Dampening of population cycles in voles affects small mammal community structure, decreases diversity, and increases prevalence of a zoonotic disease
Cited by: 21
Author(s): Frauke Ecke, David G. Angeler, Магнус Магнуссон, Hussein Khalil, Birger Hörnfeldt
Software Mentions: 2
Published: almost 9 years ago
10.1186/s12864-020-07333-z
Nutrient-imbalanced conditions shift the interplay between zooplankton and gut microbiota
Cited by: 4
Author(s): Yingdong Li, Zhimeng Xu, Hongbin Liu
Software Mentions: 2
Published: over 5 years ago
10.3390/biology10070637
Unveiling the Fecal Microbiota in Two Captive Mexican Wolf (Canis lupus baileyi) Populations Receiving Different Type of Diets
Cited by: 2
Author(s): Sergio I. Barraza-Guerrero, César A. Meza-Herrera, Cristina García-De la Peña, Verónica Ávila-Rodríguez, Felipe Vaca-Paniagua, Clara Díaz-Velásquez, Irene Pacheco-Torres, Mónica Valdez-Solana, Quetzaly K. Siller-Rodríguez, Luis Manuel Valenzuela-Núñez, Juan C. Herrera-Salazar
Software Mentions: 2
Published: almost 5 years ago
10.1002/ece3.6504
Hidden diversity in Antarctica: Molecular and morphological evidence of two different species within one of the most conspicuous ascidian species
Cited by: 6
Author(s): Micaela Ruiz, Anabela Taverna, Natalia Servetto, Ricardo Sahade, Christoph Held
Software Mentions: 2
Published: almost 6 years ago
10.1002/ece3.6762
Genetic diversity, population structure, and gene flow analysis of lowland bamboo [<i>Oxytenanthera abyssinica</i> (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: over 5 years ago
10.1002/ece3.2220
Leaf litter arthropod responses to tropical forest restoration
Cited by: 54
Author(s): Rebecca J. Cole, Karen D. Holl, Rakan A. Zahawi, Philipp Wickey, Alan R. Townsend
Software Mentions: 2
Published: almost 10 years ago
10.1007/s10661-017-6135-8
Trace element concentrations in livers of Common Buzzards Buteo buteo from eastern Poland
Cited by: 5
Author(s): Ignacy Kitowski, Dariusz Jakubas, Dariusz Wiącek, Agnieszka Sujak, Grzegorz Pitucha
Software Mentions: 2
Published: almost 9 years ago
10.3389/fimmu.2018.01996
Identification of Distinct Unmutated Chronic Lymphocytic Leukemia Subsets in Mice Based on Their T Cell Dependency
Cited by: 7
Author(s): Simar Pal Singh, Marjolein J. W. de Bruijn, Mariana P. de Almeida, Ruud W. J. Meijers, Lars Nitschke, Anton W. Langerak, Saravanan Y. Pillai, Ralph Stadhouders, Rudolf W. Hendriks
Software Mentions: 2
Published: over 7 years ago
10.1002/mbo3.828
Experimental evaluation on the applicability of necrobiome analysis in forensic veterinary science
Cited by: 9
Author(s): Fabiola Tuccia, Emad Zurgani, Sara Bortolini, Stefano Vanin
Software Mentions: 2
Published: about 7 years ago
10.7717/peerj.2696
Historical reconstruction of climatic and elevation preferences and the evolution of cloud forest-adapted tree ferns in Mesoamerica
Cited by: 21
Author(s): Victoria Sosa, Juan Francisco Ornelas, Santiago Ramírez‐Barahona, Etelvina Gándara
Software Mentions: 2
Published: over 9 years ago
10.1002/mbo3.230
Characterizing the diversity of active bacteria in soil by comprehensive stable isotope probing of DNA and RNA with H <sub>2</sub> <sup>18</sup> O
Cited by: 19
Author(s): Elizabeth A. Rettedal, Volker S. Brözel
Software Mentions: 2
Published: over 11 years ago
10.7717/peerj.5210
Spatial and temporal variations of aridity shape dung beetle assemblages towards the Sahara desert
Cited by: 8
Author(s): Indradatta deCastro‐Arrazola, Joaquín Hortal, Marco Moretti, Francisco Sánchez‐Piñero
Software Mentions: 2
Published: over 7 years ago
10.3897/zookeys.801.22829
The role of urban forest patches in maintaining isopod diversity (Oniscidea)
Cited by: 4
Author(s): Elisabeth Hornung, Andrea Kásler, Zsolt Tóth
Software Mentions: 2
Published: over 7 years ago
10.7717/peerj.2059
Geometric morphometric analysis of intratrackway variability: a case study on theropod and ornithopod dinosaur trackways from Münchehagen (Lower Cretaceous, Germany)
Cited by: 38
Author(s): Jens N. Lallensack, Anneke H. van Heteren, Oliver Wings
Software Mentions: 2
Published: almost 10 years ago
10.1002/ece3.2714
Does thinning-induced gap size result in altered soil microbial community in pine plantation in eastern Tibetan Plateau?
Cited by: 31
Author(s): Bing Yang, Xiaoyun Pang, Bin Hu, Weikai Bao, Guangming Tian
Software Mentions: 2
Published: about 9 years ago
10.1002/ece3.4998
High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary
Cited by: 9
Author(s): Angelina Nunziata, Laura Benedetti, Ilaria Marchioni, C. Cervelli
Software Mentions: 2
Published: about 7 years ago
10.1002/ece3.6631
DNA barcode assessment and population structure of aphidophagous hoverfly <i>Sphaerophoria scripta</i>: Implications for conservation biological control
Cited by: 4
Author(s): Nemanja Gojković, Ljubinka Francuski, Jasmina Ludoški, Vesna Milankov
Software Mentions: 2
Published: almost 6 years ago
10.1186/1471-2164-13-67
Aluminum tolerance association mapping in triticale
Cited by: 35
Author(s): Agnieszka Niedziela, Piotr Tomasz Bednarek, H. Cichy, Grzegorz Budzianowski, Andrzej Kilian, A. Anioł
Software Mentions: 2
Published: over 14 years ago
10.1002/ece3.562
Parallel and non-parallel morphological divergence among foraging specialists in European whitefish (<i>Coregonus lavaretus</i>)
Cited by: 47
Author(s): Anna Siwertsson, Rune Knudsen, Colin E. Adams, Kim Præbel, Per‐Arne Amundsen
Software Mentions: 2
Published: about 13 years ago
10.1002/mbo3.584
Microbial dynamics during harmful dinoflagellate<i>Ostreopsis</i>cf.<i>ovata</i>growth: Bacterial succession and viral abundance pattern
Cited by: 14
Author(s): Flavio Guidi, Laura Pezzolesi, Silvana Vanucci
Software Mentions: 2
Published: over 8 years ago
10.1002/ece3.4622
Birds in the Himalayas: What drives beta diversity patterns along an elevational gradient?
Cited by: 25
Author(s): Yiming Hu, Zhifeng Ding, Zhigang Jiang, Quan Qing, Keji Guo, Liqiao Tian, Huijian Hu, Luke Gibson
Software Mentions: 2
Published: over 7 years ago