bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2017.02511

Succession of Bacterial Communities in a Seasonally Stratified Lake with an Anoxic and Sulfidic Hypolimnion
Cited by: 42
Author(s): Muhe Diao, Ruben Sinnige, Karsten Kalbitz, Jef Huisman, Gerard Muyzer
Software Mentions: 3
Published: almost 9 years ago

10.3389/fmicb.2018.00578

Benthic Algal Community Structures and Their Response to Geographic Distance and Environmental Variables in the Qinghai-Tibetan Lakes With Different Salinity
Cited by: 23
Author(s): Jian Yang, Hongchen Jiang, Wen Liu, Beichen Wang
Software Mentions: 3
Published: over 8 years ago

10.3390/insects12020127

Biocontrol of Melolontha spp. Grubs in Organic Strawberry Plantations by Entomopathogenic Fungi as Affected by Environmental and Metabolic Factors and the Interaction with Soil Microbial Biodiversity
Cited by: 8
Author(s): Małgorzata Tartanus, Ewa M. Furmanczyk, Loredana Canfora, Flavia Pinzari, C. Tkaczuk, A. Majchrowska-Safaryan, Eligio Malusà
Software Mentions: 3
Published: over 5 years ago

10.1186/s40168-017-0284-4

Transplanted human fecal microbiota enhanced Guillain Barré syndrome autoantibody responses after Campylobacter jejuni infection in C57BL/6 mice
Cited by: 28
Author(s): Phillip T. Brooks, Kelsey A. Brakel, Julia A. Bell, Christopher E. Bejcek, Trey E. Gilpin, Jean M. Brudvig, Linda S. Mansfield
Software Mentions: 3
Published: about 9 years ago

10.1002/ece3.4859

Physical, but not chemical, antiherbivore defense expression is related to the clustered spatial distribution of tropical trees in an Amazonian forest
Cited by: 7
Author(s): Johanna Cobo-Quinche, María‐José Endara, Renato Valencia, Dolly Muñoz-Upegui, Rafael E. Cárdenas
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pone.0250452

eDNA as a tool for non-invasive monitoring of the fauna of a turbid, well-mixed system, the Elbe estuary in Germany
Cited by: 12
Author(s): Martin Schwentner, Reza Zahiri, Satoshi Yamamoto, Martin Husemann, Björn Kullmann, Ralf Thiel
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0191913

Metabarcoding analysis of eukaryotic microbiota in the gut of HIV-infected patients
Cited by: 20
Author(s): Ibrahim Hamad, Rita Abou Abdallah, Isabelle Ravaux, Saadia Mokhtari, Hervé Tissot‐Dupont, Caroline Michelle, Andréas Stein, Jean-Christophe Lagier, Didier Raoult, Fadi Bittar
Software Mentions: 3
Published: almost 9 years ago

10.1371/journal.pone.0024750

Changes in N-Transforming Archaea and Bacteria in Soil during the Establishment of Bioenergy Crops
Cited by: 118
Author(s): Yuejian Mao, Anthony C. Yannarell, Roderick I. Mackie
Software Mentions: 3
Published: about 15 years ago

10.1371/journal.pone.0059927

Pyrosequencing Reveals High-Temperature Cellulolytic Microbial Consortia in Great Boiling Spring after In Situ Lignocellulose Enrichment
Cited by: 39
Author(s): Joseph P. Peacock, Jesse Cole, Senthil K. Murugapiran, Jeremy A. Dodsworth, James S. Fisher, Duane P. Moser, Brian P. Hedlund
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0157890

Repeatability, Reproducibility, Separative Power and Subjectivity of Different Fish Morphometric Analysis Methods
Cited by: 24
Author(s): Péter Takács, Zoltán Vitál, Árpád Ferincz, Ádám Staszny
Software Mentions: 3
Published: over 10 years ago

10.1002/ece3.5713

Rapid redistribution of agricultural land alters avian richness, abundance, and functional diversity
Cited by: 6
Author(s): Stephen Pringle, Ngoni Chiweshe, Peter Steward, Peter J. Mundy, Martin Dallimer
Software Mentions: 3
Published: about 7 years ago

10.1002/ece3.8075

High genetic and epigenetic variation of transposable elements: Potential drivers to rapid adaptive evolution for the noxious invasive weed Mikania micrantha
Cited by: 5
Author(s): Yingjuan Su, Qiqi Huang, Zhen Wang, Ting Wang
Software Mentions: 3
Published: about 5 years ago

10.1002/ece3.908

Expanding the understanding of local community assembly in adaptive radiations
Cited by: 5
Author(s): Katharina C. Wollenberg, Michael Veith, Stefan Lötters
Software Mentions: 3
Published: almost 13 years ago

10.3390/genes10010042

Stress-Tolerant Yeasts: Opportunistic Pathogenicity Versus Biocontrol Potential
Cited by: 52
Author(s): Janja Zajc, Cene Gostinčar, Anja Černoša, Nina Gunde‐Cimerman
Software Mentions: 3
Published: almost 8 years ago

10.1002/ece3.646

Environmental effects on molecular and phenotypic variation in populations ofEruca sativaacross a steep climatic gradient
Cited by: 31
Author(s): Erik Westberg, Shachar Ohali, Anatoly Shevelevich, Pinchas Fine, Oz Barazani
Software Mentions: 3
Published: over 13 years ago

10.1002/ece3.6361

Modularity and heterochrony in the evolution of the ceratopsian dinosaur frill
Cited by: 9
Author(s): Albert Prieto‐Márquez, Joan García-Porta, Shantanu H. Joshi, Mark A. Norell, Peter J. Makovicky
Software Mentions: 3
Published: over 6 years ago

10.3390/genes12040545

A Complex Gene Network Mediated by Ethylene Signal Transduction TFs Defines the Flower Induction and Differentiation in Olea europaea L.
Cited by: 2
Author(s): Amelia Salimonti, Ivano Forgione, Tiziana Maria Sirangelo, Guglielmo Puccio, Antonio Mauceri, Francesco Mercati, Francesco Sunseri, Fabrizio Carbone
Software Mentions: 3
Published: over 5 years ago

10.1002/ece3.1950

Molecular and iridescent feather reflectance data reveal recent genetic diversification and phenotypic differentiation in a cloud forest hummingbird
Cited by: 19
Author(s): Juan Francisco Ornelas, Clementina González, Blanca E. Hernández‐Baños, Jaime García‐Moreno
Software Mentions: 3
Published: almost 11 years ago

10.1093/gigascience/giy073

Arabidopsis phenotyping through geometric morphometrics
Cited by: 19
Author(s): Carlos Augusto Manacorda, Sebastián Asurmendi
Software Mentions: 3
Published: over 8 years ago

10.1371/journal.pone.0173029

Exploring gastric bacterial community in young pigs
Cited by: 8
Author(s): Vincenzo Motta, Paolo Trevisi, Francesca Bertolini, Anisa Ribani, Giuseppina Schiavo, Luca Fontanesi, Paolo Bosi
Software Mentions: 3
Published: over 9 years ago

10.1002/ece3.5656

To remain or leave: Dispersal variation and its genetic consequences in benthic freshwater invertebrates
Cited by: 2
Author(s): Paolo Ruggeri, Ellen Pasternak, Beth Okamura
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0124146

The Role of Temporal Abundance Structure and Habitat Preferences in the Survival of Conodonts during the Mid-Early Silurian Ireviken Mass Extinction Event
Cited by: 13
Author(s): Andrej Spiridonov, Antanas Brazauskas, Sigitas Radzevičius
Software Mentions: 3
Published: over 11 years ago

10.1038/srep35507

Historical dimensions of population structure in a continuously distributed marine species: The case of the endemic Chilean dolphin
Cited by: 8
Author(s): María José Pérez‐Álvarez, Carlos Olavarría, Rodrigo Moraga, C. Scott Baker, Rebecca M. Hamner, Élie Poulin
Software Mentions: 3
Published: about 10 years ago

10.1002/ece3.4678

Coral epigenetic responses to nutrient stress: Histone H2A.X phosphorylation dynamics and DNA methylation in the staghorn coral Acropora cervicornis
Cited by: 35
Author(s): Javier Rodríguez-Casariego, Mark C. Ladd, Andrew A. Shantz, Christian Lopes, Manjinder S. Cheema, Bohyun Kim, Steven B. Roberts, James W. Fourqurean, Juan Ausió, Deron E. Burkepile, José M. Eirín‐López
Software Mentions: 3
Published: almost 8 years ago

10.1002/ece3.5024

Availability of food resources and habitat structure shape the individual‐resource network of a Neotropical marsupial
Cited by: 15
Author(s): Nícholas F. de Camargo, Hernani Oliveira, Juliana Fernandes Ribeiro, A. J. A. de Camargo, Emerson M. Vieira
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0250731

The abundance and diversity of fruit flies and their parasitoids change with elevation in guava orchards in a tropical Andean forest of Peru, independent of seasonality
Cited by: 5
Author(s): Paolo Salazar-Mendoza, Ivan Peralta-Aragón, Ladislao C. Romero-Rivas, Jordano Salamanca, Cesar Rodriguez‐Saona
Software Mentions: 3
Published: over 5 years ago

10.1002/ece3.1555

Size matters: nest colonization patterns for twig‐nesting ants
Cited by: 31
Author(s): Estelí Jiménez‐Soto, Stacy M. Philpott
Software Mentions: 3
Published: over 11 years ago

10.1002/ece3.4105

Strong associations between plant genotypes and bacterial communities in a natural salt marsh
Cited by: 24
Author(s): Gregory P. Zogg, Steven E. Travis, Daniel A. Brazeau
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-017-15624-x

Influences of anthropogenic land use on microbial community structure and functional potentials of stream benthic biofilms
Cited by: 31
Author(s): Xiaodong Qu, Ze Ren, Haiping Zhang, Min Zhang, Yuhang Zhang, Xiaobo Liu, Wenqi Peng
Software Mentions: 3
Published: almost 9 years ago

10.1371/journal.pone.0167286

Transcriptomic Analysis of Mouse Cochlear Supporting Cell Maturation Reveals Large-Scale Changes in Notch Responsiveness Prior to the Onset of Hearing
Cited by: 39
Author(s): Juan C. Maass, Rende Gu, Tiantian Cai, Ying-Wooi Wan, Silvia C. Cantellano, Joanna Asprer, Hongyuan Zhang, Hsin-I Jen, Renée K. Edlund, Zhandong Liu, Andrew K. Groves
Software Mentions: 3
Published: almost 10 years ago

10.1371/journal.pone.0105515

Soil Bacterial Community Response to Differences in Agricultural Management along with Seasonal Changes in a Mediterranean Region
Cited by: 85
Author(s): Annamaria Bevivino, Patrizia Paganin, Giovanni Bacci, Alessandro Florio, Maite Sampedro Pellicer, Maria Cristiana Papaleo, Alessio Mengoni, Luigi Ledda, Renato Fani, Antonio Benedetti, Claudia Dalmastri
Software Mentions: 3
Published: about 12 years ago

10.1371/journal.pone.0228976

Seasonal and social factors associated with spacing in a wild territorial electric fish
Cited by: 7
Author(s): Lucía Zubizarreta, Laura Quintana, Daniel Hernández, Franco Teixeira de Mello, Mariana Meerhoff, Renato Massaaki Honji, Renata Guimarães Moreira, Ana C. Silva
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2016.00837

Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
Cited by: 22
Author(s): Mary-Cathrine Leewis, Ondřej Uhlík, Serena Fraraccio, Kelly M. McFarlin, Anastasia Kottara, Catherine Glover, Tomáš Macek, Mary Beth Leigh
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2019.01666

Compositional Shifts of Bacterial Communities Associated With Pyropia yezoensis and Surrounding Seawater Co-occurring With Red Rot Disease
Cited by: 14
Author(s): Yonggang Yan, Huichao Yang, Lei Tang, Jie Li, Yunxiang Mao, Zhaolan Mo
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-018-26713-w

Effect of different types of olive oil pomace dietary supplementation on the rumen microbial community profile in Comisana ewes
Cited by: 41
Author(s): Federica Mannelli, Alice Cappucci, Francesco Pini, Roberta Pastorelli, Francesca Decorosi, Luciana Giovannetti, Marcello Mele, Sara Minieri, Giuseppe Conte, Mariano Pauselli, Stefano Rapaccini, Carlo Viti, Arianna Buccioni
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-27705-6

Need for focus on microbial species following ice melt and changing freshwater regimes in a Janus Arctic Gateway
Cited by: 17
Author(s): Nathalie Joli, Michel Gosselin, Mathieu Ardyna, Marcel Babin, Deo Florence L. Onda, Jean‐Éric Tremblay, Connie Lovejoy
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2020.571400

Exploring the Influence of Signal Molecules on Marine Biofilms Development
Cited by: 14
Author(s): Ruojun Wang, Wei Ding, Lexin Long, Yi Lan, Haoya Tong, Subhasish Saha, Yue Him Wong, Jin Sun, Yong-Xin Li, Weipeng Zhang, Pei‐Yuan Qian
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2018.00364

Substrate Shift Reveals Roles for Members of Bacterial Consortia in Degradation of Plant Cell Wall Polymers
Cited by: 27
Author(s): Camila Carlos, Huan Fan, Cameron R. Currie
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-29307-8

Mineralogical and textural characteristics of nest building geomaterials used by three sympatric mud-nesting hirundine species
Cited by: 9
Author(s): Dimitrios Papoulis, Olga Tzortzakaki, Pavlos Avramidis, Panagiotis Mentis, Paraskevi Lampropoulou, George Iliopoulos
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2019.00726

Negligible Impact of Perinatal Tulathromycin Metaphylaxis on the Developmental Dynamics of Fecal Microbiota and Their Accompanying Antimicrobial Resistome in Piglets
Cited by: 12
Author(s): Mohamed Zeineldin, Ameer Megahed, Benjamin Blair, Brandi Burton, Brian Aldridge, James Lowe
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-018-33007-8

Local confinement of disease-related microbiome facilitates recovery of gorgonian sea fans from necrotic-patch disease
Cited by: 14
Author(s): Elena Quintanilla, Catalina Ramírez‐Portilla, Boahemaa Adu-Oppong, Gretchen Walljasper, Stefanie P. Glaeser, Thomas Wilke, Alejandro Reyes, Juan A. Sánchez
Software Mentions: 3
Published: about 8 years ago

10.1371/journal.pone.0208406

Extracellular polymeric substances (EPS) producing and oil degrading bacteria isolated from the northern Gulf of Mexico
Cited by: 46
Author(s): Hernando P. Bacosa, Manoj Kamalanathan, Meng Hsuen Chiu, Shih Ming Tsai, Luni Sun, Jessica M. Labonté, Kathleen A. Schwehr, David Hala, Peter H. Santschi, Wei Chun Chin, Antonietta Quigg
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-33634-1

Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
Cited by: 24
Author(s): Hongyi Yang, Xingyu Zhao, Changli Liu, Long Bai, Min Zhao, Lili Li
Software Mentions: 3
Published: about 8 years ago

10.3390/cells8060623

Functionally Significant Features in the 5′ Untranslated Region of the ABCA1 Gene and Their Comparison in Vertebrates
Cited by: 10
Author(s): Pavel Dvořák, Sarah Leupen, Pavel Souček
Software Mentions: 3
Published: over 7 years ago

10.3390/cells9122700

Differentially Expressed Genes Shared by Two Distinct Cytoplasmic Male Sterility (CMS) Types of Silene vulgaris Suggest the Importance of Oxidative Stress in Pollen Abortion
Cited by: 6
Author(s): Manuela Krüger, Oushadee A. J. Abeyawardana, Claudia Krüger, Miloslav Juříček, Helena Štorchová
Software Mentions: 3
Published: almost 6 years ago

10.3389/fphar.2021.623070

Insular Pharmacopoeias: Ethnobotanical Characteristics of Medicinal Plants Used on the Adriatic Islands
Cited by: 14
Author(s): Łukasz Łuczaj, Marija Jug-Dujaković, Katija Dolina, Mirjana Jeričević, Ivana Vitasović‐Kosić
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0078613

Distinct Phyllosphere Bacterial Communities on Arabidopsis Wax Mutant Leaves
Cited by: 77
Author(s): Eva E. Reisberg, U. Hildebrandt, Markus Riederer, Ute Hentschel
Software Mentions: 3
Published: almost 13 years ago

10.1371/journal.pone.0114015

The Importance of Microhabitat for Biodiversity Sampling
Cited by: 23
Author(s): Zia Mehrabi, Eleanor M. Slade, Ángel Solís, Darren J. Mann
Software Mentions: 3
Published: almost 12 years ago

10.1038/s41598-019-38993-x

Regime shift in fish assemblage structure in the Yangtze River following construction of the Three Gorges Dam
Cited by: 24
Author(s): Xin Gao, Masami Fujiwara, Kirk O. Winemiller, Pengcheng Lin, Mingzheng Li, Huanzhang Liu
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0034339

Radiating on Oceanic Islands: Patterns and Processes of Speciation in the Land Snail Genus Theba (Risso 1826)
Cited by: 23
Author(s): Carola Greve, Rainer Hutterer, Bernhard Misof, Martín Haase
Software Mentions: 3
Published: over 14 years ago

10.1371/journal.pone.0194646

Role of oceanography in shaping the genetic structure in the North Pacific hake Merluccius productus
Cited by: 17
Author(s): Francisco J. Garcı́a de León, Carolina Galván‐Tirado, Laura Sánchez Velasco, Claudia A. Silva‐Segundo, Rafael Hernández‐Guzmán, Irene de los A. Barriga-Sosa, Píndaro Díaz Jaimes, Michael F. Canino, Pedro Cruz‐Hernández
Software Mentions: 3
Published: over 8 years ago

10.3389/fpls.2021.634960

Life on the Rocks: First Insights Into the Microbiota of the Threatened Aquatic Rheophyte Hanseniella heterophylla
Cited by: 3
Author(s): Witoon Purahong, Shakhawat Hossen, Ali Nawaz, Dolaya Sadubsarn, Benjawan Tanunchai, Sven Dommert, Matthias Noll, La‐aw Ampornpan, Petcharat Werukamkul, Tesfaye Wubet
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-42207-9

Parallel sequencing of porA reveals a complex pattern of Campylobacter genotypes that differs between broiler and broiler breeder chickens
Cited by: 12
Author(s): Frances M. Colles, Stephen G. Preston, Kenneth Klingenberg Barfod, Patrik G. Flammer, Maiden Mcj., Adrian L. Smith
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0108924

Fecal Bacterial Community Changes Associated with Isoflavone Metabolites in Postmenopausal Women after Soy Bar Consumption
Cited by: 82
Author(s): Cindy H. Nakatsu, Arthur Armstrong, Andrea Clavijo, Berdine R. Martin, Stephen Barnes, Connie M. Weaver
Software Mentions: 3
Published: about 12 years ago

10.1371/journal.pone.0197675

Procrustes-based geometric morphometrics on MRI images: An example of inter-operator bias in 3D landmarks and its impact on big datasets
Cited by: 25
Author(s): Amro Daboul, Tatyana Ivanovska, Robin Bülow, Reiner Biffar, Andrea Cardini
Software Mentions: 2
Published: over 8 years ago

10.1038/srep44382

Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar
Cited by: 134
Author(s): Amit K. Jaiswal, Y. Elad, Indira Paudel, Ellen R. Graber, Eddie Cytryn, Omer Frenkel
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0121166

Ornaments Reveal Resistance of North European Cultures to the Spread of Farming
Cited by: 42
Author(s): Solange Rigaud, Francesco d’Errico, Marian Vanhaeren
Software Mentions: 2
Published: over 11 years ago

10.1038/srep46297

Inorganic carbon physiology underpins macroalgal responses to elevated CO2
Cited by: 107
Author(s): Christopher E. Cornwall, Andrew T. Revill, Jason M. Hall‐Spencer, Marco Milazzo, John A. Raven, Catriona L. Hurd
Software Mentions: 2
Published: over 9 years ago

10.1002/ece3.1501

Elevation as a barrier: genetic structure for an<scp>A</scp>tlantic rain forest tree (<scp>B</scp>athysa australis) in the<scp>S</scp>erra do<scp>M</scp>ar mountain range,<scp>SE</scp>Brazil
Cited by: 16
Author(s): Talita Soares Reis, Maísa Ciampi-Guillardi, Miklos Maximiliano Bajay, Anete Pereira de Souza, Flávio Antonio Maës dos Santos
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0241829

Mechanical and structural properties of major ampullate silk from spiders fed carbon nanomaterials
Cited by: 5
Author(s): Shalonda Kelly, Kun-Ping Huang, Chen‐Pan Liao, Riza Ariyani Nur Khasanah, Fan Ching Chien, Jwu‐Sheng Hu, Chien‐Liang Wu, I‐Min Tso
Software Mentions: 2
Published: almost 6 years ago

10.1002/ece3.1962

Dispersal, niche, and isolation processes jointly explain species turnover patterns of nonvolant small mammals in a large mountainous region of China
Cited by: 12
Author(s): Zhixin Wen, Quan Qing, Yuanbao Du, Lin Xia, Deyan Ge, Qisen Yang
Software Mentions: 2
Published: almost 11 years ago

10.1038/s42003-021-02365-x

High concentrations of dissolved biogenic methane associated with cyanobacterial blooms in East African lake surface water
Cited by: 20
Author(s): Stefano Fazi, Stefano Amalfitano, Stefanía Venturi, Nic Pacini, Eusebi Vázquez, Lydia Olaka, Franco Tassi, Simona Crognale, Peter Herzsprung, Oliver J. Lechtenfeld, Jacopo Cabassi, Francesco Capecchiacci, Simona Rossetti, Michail M. Yakimov, Orlando Vaselli, David M. Harper, Andrea Butturini
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.7416

Changes in the Montagu’s Harrier Circus pygargus diet in Eastern Poland across decades promote insects and reptilians, but not birds and rodents
Cited by: 2
Author(s): Ignacy Kitowski, Dariusz Jakubas, Paweł Mirski, Grzegorz Pitucha, Kornelia Markowska
Software Mentions: 2
Published: over 5 years ago

10.3389/fnut.2021.590978

Mainstreaming Local Food Species for Nutritional and Livelihood Security: Insights From Traditional Food Systems of Adi Community of Arunachal Pradesh, India
Cited by: 3
Author(s): Ranjay K. Singh, Rakesh Bhardwaj, Anamika Singh, Temin Payum, Kumar Arvind, Anshuman Singh, L. Wangchu, Sanjay Kumar Upadhyay
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0195643

A snapshot of gut microbiota of an adult urban population from Western region of India
Cited by: 39
Author(s): Disha Tandon, Mohammed Monzoorul Haque, R Saravanan, Shafiq Shaikh, Pradeep Ram Angia Sriram, Ashok Kumar Dubey, Sharmila S. Mande
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0125043

Lake Tanganyika—A 'Melting Pot' of Ancient and Young Cichlid Lineages (Teleostei: Cichlidae)?
Cited by: 35
Author(s): Juliane D. Weiss, F.P.D. Cotterill, Ulrich K. Schliewen
Software Mentions: 2
Published: over 11 years ago

10.1038/s41598-017-04934-9

Large perturbations in CO2 flux and subsequent chemosynthesis are induced in agricultural soil by the addition of elemental sulfur
Cited by: 8
Author(s): Brian P. Kelleher, Paul Flanagan, Kris M. Hart, André J. Simpson, Seth F. Oppenheimer, Brian T. Murphy, Shane S. O’Reilly, Sean Jordan, Anthony Grey, A. D. Ibrahim, Christopher C. R. Allen
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-018-35940-0

Exploration of deep terrestrial subsurface microbiome in Late Cretaceous Deccan traps and underlying Archean basement, India
Cited by: 37
Author(s): Avishek Dutta, Srimanti Dutta Gupta, Abhishek Gupta, Jayeeta Sarkar, Sukanta Roy, Abhijit Mukherjee, Pinaki Sar
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0030121

Gibberellin and Auxin Influence the Diurnal Transcription Pattern of Photoreceptor Genes via CRY1a in Tomato
Cited by: 18
Author(s): Paolo Facella, Loretta Daddiego, Giovanni Giuliano, Gaetano Perrotta
Software Mentions: 2
Published: almost 15 years ago

10.1002/ece3.3899

What determines prey selection in owls? Roles of prey traits, prey class, environmental variables, and taxonomic specialization
Cited by: 19
Author(s): Orr Comay, Tamar Dayan
Software Mentions: 2
Published: over 8 years ago

10.1002/ece3.6762

Genetic diversity, population structure, and gene flow analysis of lowland bamboo [Oxytenanthera abyssinica (A. Rich.) Munro] in Ethiopia
Cited by: 16
Author(s): Oumer Abdie Oumer, Kifle Dagne, Tileye Feyissa, Kassahun Tesfaye, Jayaraman Durai, Muhammad Zeeshan Hyder
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-017-06714-x

Bottom-up effects on herbivore-induced plant defences: a case study based on compositional patterns of rhizosphere microbial communities
Cited by: 14
Author(s): Emilio Benítez, Daniel Paredes, Estefanı́a Rodrı́guez, Diana Aldana, Mónica González, R. Nogales, Mercedes Campos, Beatriz González Moreno
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-017-07251-3

The East Asian summer monsoon variability over the last 145 years inferred from the Shihua Cave record, North China
Cited by: 42
Author(s): Xianglei Li, Hai Cheng, Liangcheng Tan, Fengmei Ban, Ashish Sinha, Wuhui Duan, Hanying Li, Haiwei Zhang, Youfeng Ning, Gayatri Kathayat, R. Lawrence Edwards
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-019-43478-y

Dynamics of archaeal community in soil with application of composted tannery sludge
Cited by: 14
Author(s): Ana Roberta Lima Miranda, Lucas William Mendes, Leandro Nascimento Lemos, Jadson Emanuel Lopes Antunes, Marineide Rodrigues do Amorim, Vânia Maria Maciel Melo, Wanderley José de Melo, Paul J. Van den Brink, Ademir Sérgio Ferreira de Araújo
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0180371

Shifts in the bacterial community composition along deep soil profiles in monospecific and mixed stands of Eucalyptus grandis and Acacia mangium
Cited by: 60
Author(s): Arthur Prudêncio de Araújo Pereira, Pedro Avelino Maia de Andrade, Daniel Bini, Ademir Durrer, Agnès Robin, J. P. Bouillet, Fernando Dini Andreote, Elke Jurandy Bran Nogueira Cardoso
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-017-09073-9

Correlations of age and growth rate with microbiota composition in Atlantic cod (Gadus morhua) larvae
Cited by: 10
Author(s): Ly T. T. Trinh, Ingrid Bakke, Ôlav Vadstein
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0237283

Fate of antibiotic resistant E. coli and antibiotic resistance genes during full scale conventional and advanced anaerobic digestion of sewage sludge
Cited by: 13
Author(s): Sky Redhead, Jeroen Nieuwland, Sandra Esteves, Do‐Hoon Lee, Dae-Wi Kim, Jordan Mathias, Chang-Jun Cha, Mark A. Toleman, Richard M. Dinsdale, Alan J. Guwy, Emma J. Hayhurst
Software Mentions: 2
Published: almost 6 years ago

10.3389/fvets.2019.00354

Respiratory Dysbiosis in Canine Bacterial Pneumonia: Standard Culture vs. Microbiome Sequencing
Cited by: 14
Author(s): Aida I. Vientós‐Plotts, Aaron C. Ericsson, Hansjörg Rindt, Carol R. Reinero
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-017-12092-1

De novo transcriptome of the cosmopolitan dinoflagellate Amphidinium carterae to identify enzymes with biotechnological potential
Cited by: 51
Author(s): Chiara Lauritano, Danièle De Luca, Alberto Ferrarini, C. Avanzato, Andrea Minio, Francesco Esposito, Adrianna Ianora
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0248279

The oldest Homo erectus buried lithic horizon from the Eastern Saharan Africa. EDAR 7 - an Acheulean assemblage with Kombewa method from the Eastern Desert, Sudan
Cited by: 8
Author(s): Mirosław Masojć, Ju Yong Kim, Joanna Krupa‐Kurzynowska, Young Kwan Sohn, Maciej Ehlert, Grzegorz Michalec, Marzena Cendrowska, Eric Andrieux, Simon Armitage, Marcin Szmit, Ewa Dreczko, Jin Cheul Kim, Ji Sung Kim, Gwang-Soo Lee, Piotr Moska, Modather Abdalla Jadain
Software Mentions: 2
Published: over 5 years ago

10.3389/fvets.2020.00115

Effects of Tilmicosin Treatment on the Nasopharyngeal Microbiota of Feedlot Cattle With Respiratory Disease During the First Week of Clinical Recovery
Cited by: 7
Author(s): Mohamed Zeineldin, James Lowe, Brian Aldridge
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2019.01209

Effect of Re-acidification on Buffalo Grass Rhizosphere and Bulk Microbial Communities During Phytostabilization of Metalliferous Mine Tailings
Cited by: 23
Author(s): Linnea K. Honeker, Catherine F. Gullo, Julia W. Neilson, Jon Chorover, Raina M. Maier
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.00214

Characterization of Asymptomatic Bacteriuria Escherichia coli Isolates in Search of Alternative Strains for Efficient Bacterial Interference against Uropathogens
Cited by: 21
Author(s): Christoph Stork, Beáta Kovács, Barnabás Rózsai, Johannes Putze, Matthias Kiel, Ágnes Dorn, Judit Kovács, Szilvia Melegh, Andreas Leimbach, Tamás Kovács, G. Schneider, Mónika Kerényi, Levente Emődy, Ulrich Dobrindt
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2016.00536

Investigation of the Activity of the Microorganisms in a Reblochon-Style Cheese by Metatranscriptomic Analysis
Cited by: 46
Author(s): Christophe Monnet, Éric Dugat-Bony, Dominique Swennen, Jean-Marie Beckerich, Françoise Irlinger, Sébastien Fraud, Pascal Bonnarme
Software Mentions: 2
Published: over 10 years ago

10.3389/fmicb.2021.642125

Comparative Genomics of Emerging Lineages and Mobile Resistomes of Contemporary Broiler Strains of Salmonella Infantis and E. coli
Cited by: 6
Author(s): Ama Szmolka, Haleluya Wami, Ulrich Dobrindt
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-017-15345-1

Short-term effects of non-grazing on plants, soil biota and aboveground-belowground links in Atlantic mountain grasslands
Cited by: 15
Author(s): Lur Epelde, Anders Lanzén, Iker Mijangos, Estibaliz Sarrionandia, Mikel Anza, Carlos Garbisu
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-017-14527-1

Anaerobic digestion of pig manure supernatant at high ammonia concentrations characterized by high abundances of Methanosaeta and non-euryarchaeotal archaea
Cited by: 29
Author(s): Anna Synnøve Røstad Nordgård, Wenche Hennie Bergland, Ôlav Vadstein, В. А. Миронов, Rune Bakke, Kjetill Østgaard, Ingrid Bakke
Software Mentions: 2
Published: almost 9 years ago

10.3389/fpls.2015.00636

Host and non-host roots in rice: cellular and molecular approaches reveal differential responses to arbuscular mycorrhizal fungi
Cited by: 67
Author(s): Valentina Fiorilli, Marta Vallino, Chiara Biselli, Antonella Faccio, Paolo Bagnaresi, Paola Bonfante
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0237160

Iterative taxonomic study of Pareiorhaphis hystrix (Siluriformes, Loricariidae) suggests a single, yet phenotypically variable, species in south Brazil
Cited by: 4
Author(s): Patricia Calegari Fagundes, Edson H. L. Pereira, Roberto Esser dos Reis
Software Mentions: 2
Published: about 6 years ago

10.3389/fmicb.2014.00105

Stormwater runoff drives viral community composition changes in inland freshwaters
Cited by: 25
Author(s): Kurt E. Williamson, Jamie V. Harris, Jasmin C. Green, Faraz Rahman, Randolph M. Chambers
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0165447

Testing Dietary Hypotheses of East African Hominines Using Buccal Dental Microwear Data
Cited by: 19
Author(s): Laura M. Martínez, Ferran Estebaranz‐Sánchez, Jordi Galbany, Alejandro Pérez‐Pérez
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2015.01166

Taxonomic and functional characteristics of microbial communities and their correlation with physicochemical properties of four geothermal springs in Odisha, India
Cited by: 57
Author(s): Jhasketan Badhai, Tarini Shankar Ghosh, Subrata K. Das
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0185187

Photosynthetic epibionts and endobionts of Pacific oyster shells from oyster reefs in rocky versus mudflat shores
Cited by: 16
Author(s): Laurent Barillé, Anthony Le Bris, Vona Méléder, Patrick Launeau, Marc Robin, Ioanna Louvrou, Lourenço Ribeiro
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0141152

Microbial Contaminants of Cord Blood Units Identified by 16S rRNA Sequencing and by API Test System, and Antibiotic Sensitivity Profiling
Cited by: 6
Author(s): Luís França, Catarina Simões, Marco Taborda, Catarina Diogo, Milton S. da Costa
Software Mentions: 2
Published: about 11 years ago

10.1038/s41598-019-39860-5

New molecular insights on the response of the green alga Tetraselmis suecica to nitrogen starvation
Cited by: 45
Author(s): Chiara Lauritano, Danièle De Luca, Mariano M. Amoroso, Salvatore Benfatto, Simone Maestri, Claudia Racioppi, Francesco Esposito, Adrianna Ianora
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0202278

Subgingival microbiome of rheumatoid arthritis patients in relation to their disease status and periodontal health
Cited by: 40
Author(s): Kathrin Beyer, Egija Zaura, Bernd W. Brandt, M.J. Buijs, Johan G. Brun, Wim Crielaard, Anne Isine Bolstad
Software Mentions: 2
Published: about 8 years ago

10.1038/s42003-021-02249-0

Supplier-origin mouse microbiomes significantly influence locomotor and anxiety-related behavior, body morphology, and metabolism
Cited by: 12
Author(s): Aaron C. Ericsson, Marcia L. Hart, Jessica Y. Kwan, Louise Lanoue, Lynette Bower, Renee Araiza, Kevin C K Lloyd, Craig L. Franklin
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.00574

Characterization of Unexplored Deadwood Mycobiome in Highly Diverse Subtropical Forests Using Culture-independent Molecular Technique
Cited by: 30
Author(s): Witoon Purahong, Katherina A. Pietsch, Guillaume Lentendu, Ricardo Schöps, Helge Bruelheide, Christian Wirth, François Buscot, Tesfaye Wubet
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0080825

Variable Effects of Dispersal on Productivity of Bacterial Communities Due to Changes in Functional Trait Composition
Cited by: 19
Author(s): Ina Severin, Örjan Östman, Eva S. Lindström
Software Mentions: 2
Published: almost 13 years ago

10.1002/ece3.4622

Birds in the Himalayas: What drives beta diversity patterns along an elevational gradient?
Cited by: 25
Author(s): Yiming Hu, Zhifeng Ding, Zhigang Jiang, Quan Qing, Keji Guo, Liqiao Tian, Huijian Hu, Luke Gibson
Software Mentions: 2
Published: almost 8 years ago

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