Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: PAST

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAST

Pathway Association Study Tool (PAST)
1 version
Latest release: about 1 year ago
4,613 downloads total

Papers Mentioning PAST 2,336

10.3389/fmicb.2015.01297
Particle-Associated Differ from Free-Living Bacteria in Surface Waters of the Baltic Sea
Cited by: 132
Author(s): Angelika Rieck, Daniel P. R. Herlemann, Klaus Jürgens, Hans‐Peter Grossart
Software Mentions: 3
Published: almost 9 years ago
10.1002/ece3.4678
Coral epigenetic responses to nutrient stress: Histone H2A.X phosphorylation dynamics and DNA methylation in the staghorn coral <i>Acropora cervicornis</i>
Cited by: 35
Author(s): Javier Rodríguez-Casariego, Mark C. Ladd, Andrew A. Shantz, Christian Lopes, Manjinder S. Cheema, Bohyun Kim, Steven B. Roberts, James W. Fourqurean, Juan Ausió, Deron E. Burkepile, José M. Eirín‐López
Software Mentions: 3
Published: almost 6 years ago
10.3389/fmicb.2019.02271
Distinct Successions of Common and Rare Bacteria in Soil Under Humic Acid Amendment – A Microcosm Study
Cited by: 30
Author(s): Pengfa Li, Jia Liu, Chunyu Jiang, Meng Wu, Ming Liu, Zhongpei Li
Software Mentions: 3
Published: about 5 years ago
10.1038/s41598-018-29307-8
Mineralogical and textural characteristics of nest building geomaterials used by three sympatric mud-nesting hirundine species
Cited by: 9
Author(s): Dimitrios Papoulis, Olga Tzortzakaki, Pavlos Avramidis, Panagiotis Mentis, Paraskevi Lampropoulou, George Iliopoulos
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pone.0039752
Convergence and Divergence in the Evolution of Cat Skulls: Temporal and Spatial Patterns of Morphological Diversity
Cited by: 54
Author(s): Manabu Sakamoto, Marcello Ruta
Software Mentions: 3
Published: over 12 years ago
10.1371/journal.pone.0067792
Evolution and Allometry of Calcaneal Elongation in Living and Extinct Primates
Cited by: 53
Author(s): Douglas Boyer, Erik R. Seiffert, Justin T. Gladman, Jonathan I. Bloch
Software Mentions: 3
Published: over 11 years ago
10.3389/fmicb.2019.02907
A New High Throughput Sequencing Assay for Characterizing the Diversity of Natural Vibrio Communities and Its Application to a Pacific Oyster Mortality Event
Cited by: 22
Author(s): William L. King, Nachshon Siboni, Tim Kahlke, Timothy Green, Maurizio Labbate, Justin R. Seymour
Software Mentions: 3
Published: almost 5 years ago
10.3389/fmicb.2018.01251
Gut Bacterial Communities of Dendroctonus valens and Monoterpenes and Carbohydrates of Pinus tabuliformis at Different Attack Densities to Host Pines
Cited by: 7
Author(s): Dandan Xu, Letian Xu, Fangyuan Zhou, Bo Wang, Shanshan Wang, Min Lü, Jianghua Sun
Software Mentions: 3
Published: over 6 years ago
10.1038/s41598-018-33007-8
Local confinement of disease-related microbiome facilitates recovery of gorgonian sea fans from necrotic-patch disease
Cited by: 14
Author(s): Elena Quintanilla, Catalina Ramírez‐Portilla, Boahemaa Adu-Oppong, Gretchen Walljasper, Stefanie P. Glaeser, Thomas Wilke, Alejandro Reyes, Juan A. Sánchez
Software Mentions: 3
Published: about 6 years ago
10.1128/mSphereDirect.00211-19
Laryngotracheal Microbiota in Adult Laryngotracheal Stenosis
Cited by: 30
Author(s): Alexander T. Hillel, Sharon Tang, Camila Carlos, Joseph H. Skarlupka, Madhu Gowda, Linda X. Yin, Kevin Motz, Cameron R. Currie, Garret Suen, Susan L. Thibeault
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-018-33634-1
Diversity and characteristics of colonization of root-associated fungi of Vaccinium uliginosum
Cited by: 24
Author(s): Hongyi Yang, Xingyu Zhao, Changli Liu, Long Bai, Min Zhao, Lili Li
Software Mentions: 3
Published: about 6 years ago
10.1128/mSystems.01056-20
Microbiome Aggregated Traits and Assembly Are More Sensitive to Soil Management than Diversity
Cited by: 14
Author(s): Andrew L. Neal, David Hughes, Ian M. Clark, Janet K. Jansson, P. R. Hirsch
Software Mentions: 3
Published: over 3 years ago
10.1038/s41598-017-15624-x
Influences of anthropogenic land use on microbial community structure and functional potentials of stream benthic biofilms
Cited by: 31
Author(s): Xiaodong Qu, Ze Ren, Haiping Zhang, Min Zhang, Yuhang Zhang, Xiaobo Liu, Wenqi Peng
Software Mentions: 3
Published: about 7 years ago
10.1038/s41396-018-0300-0
Legacy of land use history determines reprogramming of plant physiology by soil microbiome
Cited by: 140
Author(s): Yong Li, Alexandre Jousset, Wietse de Boer, Víctor J. Carrión, Taolin Zhang, Xingxiang Wang, Eiko E. Kuramae
Software Mentions: 3
Published: about 6 years ago
10.3389/fmicb.2017.02511
Succession of Bacterial Communities in a Seasonally Stratified Lake with an Anoxic and Sulfidic Hypolimnion
Cited by: 42
Author(s): Muhe Diao, Ruben Sinnige, Karsten Kalbitz, Jef Huisman, Gerard Muyzer
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0105515
Soil Bacterial Community Response to Differences in Agricultural Management along with Seasonal Changes in a Mediterranean Region
Cited by: 85
Author(s): Annamaria Bevivino, Patrizia Paganin, Giovanni Bacci, Alessandro Florio, Maite Sampedro Pellicer, Maria Cristiana Papaleo, Alessio Mengoni, Luigi Ledda, Renato Fani, Antonio Benedetti, Claudia Dalmastri
Software Mentions: 3
Published: over 10 years ago
10.1002/ece3.646
Environmental effects on molecular and phenotypic variation in populations of<i>Eruca sativa</i>across a steep climatic gradient
Cited by: 31
Author(s): Erik Westberg, Shachar Ohali, Anatoly Shevelevich, Pinchas Fine, Oz Barazani
Software Mentions: 3
Published: over 11 years ago
10.3390/cells8060623
Functionally Significant Features in the 5′ Untranslated Region of the ABCA1 Gene and Their Comparison in Vertebrates
Cited by: 10
Author(s): Pavel Dvořák, Sarah Leupen, Pavel Souček
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2016.00440
Rhizosphere Microbiomes of European + Seagrasses Are Selected by the Plant, But Are Not Species Specific
Cited by: 113
Author(s): Catarina Cúcio, Aschwin H. Engelen, Rodrigo Costa, Gerard Muyzer
Software Mentions: 3
Published: over 8 years ago
10.1371/journal.pone.0248806
Soil bacterial communities and their associated functions for forest restoration on a limestone mine in northern Thailand
Cited by: 11
Author(s): Chakriya Sansupa, Witoon Purahong, Tesfaye Wubet, Pimonrat Tiansawat, Wasu Pathom-aree, Neung Teaumroong, Panuwan Chantawannakul, François Buscot, Stephen Elliott, Terd Disayathanoowat
Software Mentions: 3
Published: over 3 years ago
10.3390/cells9122700
Differentially Expressed Genes Shared by Two Distinct Cytoplasmic Male Sterility (CMS) Types of Silene vulgaris Suggest the Importance of Oxidative Stress in Pollen Abortion
Cited by: 6
Author(s): Manuela Krüger, Oushadee A. J. Abeyawardana, Claudia Krüger, Miloslav Juříček, Helena Štorchová
Software Mentions: 3
Published: almost 4 years ago
10.1002/ece3.4859
Physical, but not chemical, antiherbivore defense expression is related to the clustered spatial distribution of tropical trees in an Amazonian forest
Cited by: 7
Author(s): Johanna Cobo-Quinche, María‐José Endara, Renato Valencia, Dolly Muñoz-Upegui, Rafael E. Cárdenas
Software Mentions: 3
Published: almost 6 years ago
10.1002/ece3.5024
Availability of food resources and habitat structure shape the individual‐resource network of a Neotropical marsupial
Cited by: 15
Author(s): Nícholas F. de Camargo, Hernani Oliveira, Juliana Fernandes Ribeiro, A. J. A. de Camargo, Emerson M. Vieira
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2019.00908
Bacterioplankton Community Composition Along Environmental Gradients in Lakes From Byers Peninsula (Maritime Antarctica) as Determined by Next-Generation Sequencing
Cited by: 25
Author(s): Antonio Picazo, Carlos Rochera, Juan Antonio Villaescusa, Javier Miralles‐Lorenzo, David Velázquez, Antonio Quesada, Antonio Camacho
Software Mentions: 3
Published: over 5 years ago
10.1038/s41598-019-38993-x
Regime shift in fish assemblage structure in the Yangtze River following construction of the Three Gorges Dam
Cited by: 24
Author(s): Xin Gao, Masami Fujiwara, Kirk O. Winemiller, Pengcheng Lin, Mingzheng Li, Huanzhang Liu
Software Mentions: 3
Published: over 5 years ago
10.1155/2018/2837328
Illumina MiSeq Sequencing for Preliminary Analysis of Microbiome Causing Primary Endodontic Infections in Egypt
Cited by: 15
Author(s): Sally Ali Tawfik, Marwa Azab, Ali Abdellah Abdelrahman Ahmed, Dalia Mukhtar Fayyad
Software Mentions: 3
Published: almost 7 years ago
10.1002/ece3.1555
Size matters: nest colonization patterns for twig‐nesting ants
Cited by: 31
Author(s): Estelí Jiménez‐Soto, Stacy M. Philpott
Software Mentions: 3
Published: over 9 years ago
10.3389/fmicb.2019.00594
High-Throughput Illumina MiSeq Amplicon Sequencing of Yeast Communities Associated With Indigenous Dairy Products From Republics of Benin and Niger
Cited by: 14
Author(s): Philippe Sessou, Santosh Keisam, Ngangyola Tuikhar, Mariama Gagara, Souaïbou Farougou, Kumaraswamy Jeyaram
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2016.00462
Carrageenan Gum and Adherent Invasive Escherichia coli in a Piglet Model of Inflammatory Bowel Disease: Impact on Intestinal Mucosa-associated Microbiota
Cited by: 41
Author(s): Peris M. Munyaka, Shadi Sepehri, Jean–Eric Ghia, Ehsan Khafipour
Software Mentions: 3
Published: over 8 years ago
10.3389/fmicb.2016.00426
The Features of Fecal and Ileal Mucosa-Associated Microbiota in Dairy Calves during Early Infection with Mycobacterium avium Subspecies paratuberculosis
Cited by: 42
Author(s): Hooman Derakhshani, Jeroen De Buck, Rienske A.R. Mortier, Herman W. Barkema, Denis O. Krause, Ehsan Khafipour
Software Mentions: 3
Published: over 8 years ago
10.1038/s41598-019-42207-9
Parallel sequencing of porA reveals a complex pattern of Campylobacter genotypes that differs between broiler and broiler breeder chickens
Cited by: 12
Author(s): Frances M. Colles, Stephen G. Preston, Kenneth Klingenberg Barfod, Patrik G. Flammer, Maiden Mcj., Adrian L. Smith
Software Mentions: 3
Published: over 5 years ago
10.3389/fmicb.2018.01664
Microbial Community Changes in a Chlorinated Solvents Polluted Aquifer Over the Field Scale Treatment With Poly-3-Hydroxybutyrate as Amendment
Cited by: 26
Author(s): Bruna Matturro, Lucia Pierro, Emanuela Frascadore, Marco Petrangeli Papini, Simona Rossetti
Software Mentions: 3
Published: over 6 years ago
10.1002/ece3.4105
Strong associations between plant genotypes and bacterial communities in a natural salt marsh
Cited by: 24
Author(s): Gregory P. Zogg, Steven E. Travis, Daniel A. Brazeau
Software Mentions: 3
Published: over 6 years ago
10.3389/fmicb.2018.00002
Transcriptome Analysis of a Bloom-Forming Cyanobacterium Microcystis aeruginosa during Ma-LMM01 Phage Infection
Cited by: 25
Author(s): Daichi Morimoto, Shigeko Kimura, Yoshihiko Sako, Takashi Yoshida
Software Mentions: 3
Published: almost 7 years ago
10.3389/fmicb.2015.01300
Forest Management Type Influences Diversity and Community Composition of Soil Fungi across Temperate Forest Ecosystems
Cited by: 117
Author(s): Kezia Goldmann, Ingo Schöning, François Buscot, Tesfaye Wubet
Software Mentions: 3
Published: almost 9 years ago
10.3389/fmicb.2020.00285
The Distribution of Bathyarchaeota in Surface Sediments of the Pearl River Estuary Along Salinity Gradient
Cited by: 27
Author(s): Dayu Zou, Jie Pan, Zongbao Liu, Chuanlun Zhang, Hongbin Liu, Meng Li
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0225246
Genetic and morphological divergence in the warm-water planktonic foraminifera genus Globigerinoides
Cited by: 33
Author(s): Raphaël Morard, Angelina Füllberg, G.J.A. Brummer, Mattia Greco, Lukas Jonkers, André Wizemann, Agnes Weiner, Kate Darling, Michael Siccha, Ronan Ledevin, Hiroshi Kitazato, Thibault de Garidel‐Thoron, Colomban de Vargas, Michal Kučera
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0017000
Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils
Cited by: 440
Author(s): Heiko Nacke, Andrea Thürmer, Antje Wollherr, Christiane Will, Ladislav Hodač, Nadine Herold, Ingo Schöning, Marion Schrumpf, Rolf Daniel
Software Mentions: 3
Published: almost 14 years ago
10.1371/journal.pone.0124146
The Role of Temporal Abundance Structure and Habitat Preferences in the Survival of Conodonts during the Mid-Early Silurian Ireviken Mass Extinction Event
Cited by: 13
Author(s): Andrej Spiridonov, Antanas Brazauskas, Sigitas Radzevičius
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0226985
What nature separated, and human joined together: About a spontaneous hybridization between two allopatric dogwood species (Cornus controversa and C. alternifolia)
Cited by: 3
Author(s): Barbara Gawrońska, Maria Morozowska, Katarzyna Nuc, Piotr Kosiński, Ryszard Słomski
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0173029
Exploring gastric bacterial community in young pigs
Cited by: 8
Author(s): Vincenzo Motta, Paolo Trevisi, Francesca Bertolini, Anisa Ribani, Giuseppina Schiavo, Luca Fontanesi, Paolo Bosi
Software Mentions: 3
Published: over 7 years ago
10.1002/ece3.5713
Rapid redistribution of agricultural land alters avian richness, abundance, and functional diversity
Cited by: 6
Author(s): Stephen Pringle, Ngoni Chiweshe, Peter Steward, Peter J. Mundy, Martin Dallimer
Software Mentions: 3
Published: about 5 years ago
10.3389/fmicb.2018.00076
Fungal Genetics and Functional Diversity of Microbial Communities in the Soil under Long-Term Monoculture of Maize Using Different Cultivation Techniques
Cited by: 29
Author(s): Anna Gałązka, Jarosław Grządziel
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0218257
Microbiota data from low biomass milk samples is markedly affected by laboratory and reagent contamination
Cited by: 35
Author(s): Josef Dahlberg, Li Sun, Karin Persson Waller, K. Östensson, Mark A. McGuire, Sigrid Agenäs, Johan Dicksved
Software Mentions: 3
Published: over 5 years ago
10.1002/ece3.8075
High genetic and epigenetic variation of transposable elements: Potential drivers to rapid adaptive evolution for the noxious invasive weed <i>Mikania micrantha</i>
Cited by: 5
Author(s): Yingjuan Su, Qiqi Huang, Zhen Wang, Ting Wang
Software Mentions: 3
Published: about 3 years ago
10.3389/fmicb.2021.629169
Targeting the Active Rhizosphere Microbiome of Trifolium pratense in Grassland Evidences a Stronger-Than-Expected Belowground Biodiversity-Ecosystem Functioning Link
Cited by: 15
Author(s): Sara Fareed Mohamed Wahdan, Anna Heintz‐Buschart, Chakriya Sansupa, Benjawan Tanunchai, Yuting Wu, Martin Schädler, Matthias Noll, Witoon Purahong, François Buscot
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0235312
Who’s afraid of the big bad boar? Assessing the effect of wild boar presence on the occurrence and activity patterns of other mammals
Cited by: 6
Author(s): Êmila Silveira de Oliveira, Manoel Ludwig da Fontoura Rodrigues, Magnus Machado Severo, Tiágo Gomes dos Santos, Carlos Benhur Kasper
Software Mentions: 3
Published: over 4 years ago
10.3390/ijms17111734
Pine Defensive Monoterpene α-Pinene Influences the Feeding Behavior of Dendroctonus valens and Its Gut Bacterial Community Structure
Cited by: 33
Author(s): Letian Xu, Zhanghong Shi, Bo Wang, Min Lü, Sun Jian
Software Mentions: 3
Published: about 8 years ago
10.3389/fmicb.2017.00715
Relative Abundance and Diversity of Bacterial Methanotrophs at the Oxic–Anoxic Interface of the Congo Deep-Sea Fan
Cited by: 11
Author(s): Sandrine Bessette, Yann Moalic, Sébastien Gautey, Françoise Lesongeur, Anne Godfroy, Laurent Toffin
Software Mentions: 3
Published: over 7 years ago
10.1038/srep35507
Historical dimensions of population structure in a continuously distributed marine species: The case of the endemic Chilean dolphin
Cited by: 8
Author(s): María José Pérez‐Álvarez, Carlos Olavarría, Rodrigo Moraga, C. Scott Baker, Rebecca M. Hamner, Élie Poulin
Software Mentions: 3
Published: about 8 years ago
10.1002/ece3.1950
Molecular and iridescent feather reflectance data reveal recent genetic diversification and phenotypic differentiation in a cloud forest hummingbird
Cited by: 19
Author(s): Juan Francisco Ornelas, Clementina González, Blanca E. Hernández‐Baños, Jaime García‐Moreno
Software Mentions: 3
Published: almost 9 years ago
10.3389/fmicb.2018.02120
Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
Cited by: 39
Author(s): Witoon Purahong, Tesfaye Wubet, Guillaume Lentendu, Björn Hoppe, Katalee Jariyavidyanont, Tobias Arnstadt, Kristin Baber, Peter Otto, Harald Kellner, Martin Hofrichter, Jürgen Bauhus, Wolfgang W. Weisser, Dirk Krüger, Ernst Detlef Schulze, Tiemo Kahl, François Buscot
Software Mentions: 3
Published: about 6 years ago
10.3389/fmicb.2017.02319
Taxonomic and Functional Differences between Microbial Communities in Qinghai Lake and Its Input Streams
Cited by: 50
Author(s): Ze Ren, Fang Wang, Xiaodong Qu, James J. Elser, Yang Liu, Limin Chu
Software Mentions: 3
Published: almost 7 years ago
10.1002/ece3.908
Expanding the understanding of local community assembly in adaptive radiations
Cited by: 5
Author(s): Katharina C. Wollenberg, Michael Veith, Stefan Lötters
Software Mentions: 3
Published: almost 11 years ago
10.1002/ece3.4622
Birds in the Himalayas: What drives beta diversity patterns along an elevational gradient?
Cited by: 25
Author(s): Yiming Hu, Zhifeng Ding, Zhigang Jiang, Quan Qing, Keji Guo, Liqiao Tian, Huijian Hu, Luke Gibson
Software Mentions: 2
Published: about 6 years ago
10.1007/s00442-021-04865-3
Plant species- and stage-specific differences in microbial decay of mangrove leaf litter: the older the better?
Cited by: 18
Author(s): Novia Arinda Pradisty, Ahmad Aldrie Amir, Martin Zimmer
Software Mentions: 2
Published: almost 4 years ago
10.1093/jisesa/iev107
An Alien in the Group: Eusocial Male Bees Sharing Nonspecific Reproductive Aggregations
Cited by: 9
Author(s): Charles Fernando dos Santos, M. J. Ferreira-Caliman, Fábio Santos do Nascimento
Software Mentions: 2
Published: almost 10 years ago
10.3389/fmicb.2017.01911
Denitrification and Biodiversity of Denitrifiers in a High-Mountain Mediterranean Lake
Cited by: 18
Author(s): Antonio Castellano‐Hinojosa, David Correa‐Galeote, Presentación Carrillo, Eulogio J. Bedmar, Juan Manuel Medina‐Sánchez
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0143332
A Hominin Femur with Archaic Affinities from the Late Pleistocene of Southwest China
Cited by: 13
Author(s): Darren Curnoe, Xueping Ji, Wu Liu, Bao Zhende, Paul S.C. Taçon, Liang Ren
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0195345
Fungal community profiles in agricultural soils of a long-term field trial under different tillage, fertilization and crop rotation conditions analyzed by high-throughput ITS-amplicon sequencing
Cited by: 65
Author(s): Loreen Sommermann, Joerg Geistlinger, Daniel Wibberg, Annette Deubel, Jessica Zwanzig, Doreen Babin, Andreas Schlüter, Ingo Schellenberg
Software Mentions: 2
Published: over 6 years ago
10.3389/fmicb.2018.02082
Desiccation- and Saline-Tolerant Bacteria and Archaea in Kalahari Pan Sediments
Cited by: 33
Author(s): Steffi Genderjahn, Mashal Alawi, Kai Mangelsdorf, Fabian Horn, Dirk Wagner
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0168860
Effects of Propidium Monoazide (PMA) Treatment on Mycobiome and Bacteriome Analysis of Cystic Fibrosis Airways during Exacerbation
Cited by: 21
Author(s): Linh D. N. Nguyen, Pieter Deschaght, Sophie Merlin, Alexandre Loywick, Christophe Audebert, S. Van Daele, Éric Viscogliosi, Mario Vaneechoutte, Laurence Delhaès
Software Mentions: 2
Published: almost 8 years ago
10.7554/eLife.04147
Decoding odor quality and intensity in the Drosophila brain
Cited by: 130
Author(s): Antonia Strutz, Jan Soelter, Amelie Baschwitz, Abu Farhan, Veit Grabe, Jürgen Rybak, Markus Knaden, Michael Schmuker, Bill S. Hansson, Silke Sachse
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0053649
Biased Diversity Metrics Revealed by Bacterial 16S Pyrotags Derived from Different Primer Sets
Cited by: 144
Author(s): Chunye Lin, Lin Ye, Amy Tong, Si Lok, Tong Zhang
Software Mentions: 2
Published: almost 12 years ago
10.1002/ece3.3899
What determines prey selection in owls? Roles of prey traits, prey class, environmental variables, and taxonomic specialization
Cited by: 19
Author(s): Orr Comay, Tamar Dayan
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0234395
Mapping QTLs underpin nutrition components in aromatic rice germplasm
Cited by: 11
Author(s): Mohammad Zahidul Islam, Md. Arifuzzaman, Sarbani Banik, Mahmud Hossain, Jannatul Ferdous, M Khalequzzaman, Barry R. Pittendrigh, Motonori Tomita, M. P. Ali
Software Mentions: 2
Published: over 4 years ago
10.1002/ece3.1962
Dispersal, niche, and isolation processes jointly explain species turnover patterns of nonvolant small mammals in a large mountainous region of China
Cited by: 12
Author(s): Zhixin Wen, Quan Qing, Yuanbao Du, Lin Xia, Deyan Ge, Qisen Yang
Software Mentions: 2
Published: almost 9 years ago
10.7554/eLife.65532
Genomic basis for drought resistance in European beech forests threatened by climate change
Cited by: 25
Author(s): Markus Pfenninger, Friederike Reuss, Angelika Kiebler, Philipp Schönnenbeck, Cosima Caliendo, Susanne Gerber, Berardino Cocchiararo, Sabrina Reuter, Nico Blüthgen, Karsten Mody, Bagdevi Mishra, Miklós Bálint, Marco Thines, Barbara Feldmeyer
Software Mentions: 2
Published: over 3 years ago
10.1002/ece3.1501
Elevation as a barrier: genetic structure for an<scp>A</scp>tlantic rain forest tree (<i><scp>B</scp>athysa australis</i>) in the<scp>S</scp>erra do<scp>M</scp>ar mountain range,<scp>SE</scp>Brazil
Cited by: 16
Author(s): Talita Soares Reis, Maísa Ciampi-Guillardi, Miklos Maximiliano Bajay, Anete Pereira de Souza, Flávio Antonio Maës dos Santos
Software Mentions: 2
Published: over 9 years ago
10.3390/ijms20040988
FTIR and Raman Spectroscopy-Based Biochemical Profiling Reflects Genomic Diversity of Clinical Candida Isolates That May Be Useful for Diagnosis and Targeted Therapy of Candidiasis
Cited by: 19
Author(s): Leszek Potocki, Joanna Depciuch, Ewelina Kuna, Mariusz Worek, Anna Lewińska, Maciej Wnuk
Software Mentions: 2
Published: over 5 years ago
10.3389/fmicb.2012.00434
Lower Respiration in the Littoral Zone of a Subtropical Shallow Lake
Cited by: 8
Author(s): Ng Haig They, David da Motta Marques, Rafael Siqueira Souza
Software Mentions: 2
Published: almost 12 years ago
10.3390/ijms20164030
Dynamic Changes in Metabolite Accumulation and the Transcriptome during Leaf Growth and Development in Eucommia ulmoides
Cited by: 21
Author(s): Long Li, Minhao Liu, Kun Shi, Zhiying Yu, Ying Zhou, Ruishen Fan, Qianqian Shi
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0162328
Population Genetic Structure of Aedes fluviatilis (Diptera: Culicidae)
Cited by: 20
Author(s): Laura Cristina Multini, André Barretto Bruno Wilke, Lincoln Suesdek, Mauro Toledo Marrelli
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0076095
Combined Amplicon Pyrosequencing Assays Reveal Presence of the Apicomplexan “type-N” (cf. Gemmocystis cylindrus) and Chromera velia on the Great Barrier Reef, Australia
Cited by: 20
Author(s): Jan Šlapeta, Marjorie C. Linares
Software Mentions: 2
Published: about 11 years ago
10.1038/srep27234
Glacial melting: an overlooked threat to Antarctic krill
Cited by: 40
Author(s): Verónica Fuentes, Gastón Alurralde, Bettina Meyer, Gastón E. Aguirre, Antonio Canepa, Anne-Cathrin Wölfl, Christian Hass, Gabriela Noemí Williams, Irene R Schloss
Software Mentions: 2
Published: over 8 years ago
10.1002/ece3.562
Parallel and non-parallel morphological divergence among foraging specialists in European whitefish (<i>Coregonus lavaretus</i>)
Cited by: 47
Author(s): Anna Siwertsson, Rune Knudsen, Colin E. Adams, Kim Præbel, Per‐Arne Amundsen
Software Mentions: 2
Published: over 11 years ago
10.1038/srep31447
Simulated leakage of high pCO2 water negatively impacts bivalve dominated infaunal communities from the Western Baltic Sea
Cited by: 21
Author(s): Hanna Schade, Lisa Mevenkamp, Katja Guilini, Stefanie Meyer, Stanislav N. Gorb, Doris Abele, Alexandra Vanreusel, Frank Melzner
Software Mentions: 2
Published: over 8 years ago
10.1038/srep33013
Rate of biological invasions is lower in coastal marine protected areas
Cited by: 24
Author(s): Alba Ardura, Francis Juanes, Serge Planes, Eva García‐Vázquez
Software Mentions: 2
Published: about 8 years ago
10.1371/journal.pone.0141651
Carnivory during Ontogeny of the Plagioscion squamosissimus: A Successful Non-Native Fish in a Lentic Environment of the Upper Paraná River Basin
Cited by: 18
Author(s): Mayara Pereira Neves, Rosilene Luciana Delariva, Ana Tereza Bittencourt Guimarães, Paulo Vanderlei Sanches
Software Mentions: 2
Published: about 9 years ago
10.1038/srep36645
Tracking modern human population history from linguistic and cranial phenotype
Cited by: 11
Author(s): Hugo Reyes-Centeno, Katerina Harvati, Gerhard Jäger
Software Mentions: 2
Published: about 8 years ago
10.1038/srep36169
Stepwise onset of the Icehouse world and its impact on Oligo-Miocene Central Asian mammals
Cited by: 21
Author(s): Mathias Harzhauser, Gudrun Daxner-Höck, Paloma López-Guerrero, Olivier Maridet, Adriana Oliver, Werner E. Piller, Sylvain Richoz, Margarita A. Erbajeva, Thomas A. Neubauer, Ursula B. Göhlich
Software Mentions: 2
Published: almost 8 years ago
10.1038/srep37753
Selection for predation, not female fecundity, explains sexual size dimorphism in the orchid mantises
Cited by: 17
Author(s): Gavin J. Svenson, Sydney K. Brannoch, Henrique M. Rodrigues, James C. O’Hanlon, Werner Frank
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0231696
Mashes to Mashes, Crust to Crust. Presenting a novel microstructural marker for malting in the archaeological record
Cited by: 17
Author(s): A. Heiß, Marian Berihuete Azorín, Ferran Antolín, Lucy Kubiak-Martens, Elena Marinova, Elke K. Arendt, Costas G. Βiliaderis, H. Kretschmer, Athina Lazaridou, Hans‐Peter Stika, Martin Zarnkow, Mitsuhisa Baba, Niels Bleicher, Krzysztof M. Ciałowicz, Marek Chłodnicki, Irenäus Matuschik, Helmut Schlichtherle, Soultana Maria Valamoti
Software Mentions: 2
Published: over 4 years ago
10.1038/srep42278
Linking gene expression to productivity to unravel long- and short-term responses of seagrasses exposed to CO2 in volcanic vents
Cited by: 20
Author(s): Irene Olivé, João Silva, Chiara Lauritano, Monya M. Costa, Miriam Ruocco, Gabriele Procaccini, Rui Santos
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0221770
The Pacific harbor seal gut microbiota in Mexico: Its relationship with diet and functional inferences
Cited by: 22
Author(s): Arlette Pacheco-Sandoval, Yolanda Schramm, Gisela Heckel, Elizabeth Brassea-Pérez, Marcel Martínez‐Porchas, Asunción Lago‐Lestón
Software Mentions: 2
Published: about 5 years ago
10.1038/srep44382
Linking the Belowground Microbial Composition, Diversity and Activity to Soilborne Disease Suppression and Growth Promotion of Tomato Amended with Biochar
Cited by: 134
Author(s): Amit K. Jaiswal, Y. Elad, Indira Paudel, Ellen R. Graber, Eddie Cytryn, Omer Frenkel
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0148130
Spatial Distribution of Fungal Communities in an Arable Soil
Cited by: 55
Author(s): Julia Moll, Björn Hoppe, Stephan König, Tesfaye Wubet, François Buscot, Dirk Krüger
Software Mentions: 2
Published: almost 9 years ago
10.1038/srep46297
Inorganic carbon physiology underpins macroalgal responses to elevated CO2
Cited by: 107
Author(s): Christopher E. Cornwall, Andrew T. Revill, Jason M. Hall‐Spencer, Marco Milazzo, John A. Raven, Catriona L. Hurd
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0230952
Using Maize δ15N values to assess soil fertility in fifteenth- and sixteenth-century ad Iroquoian agricultural fields
Cited by: 10
Author(s): John P. Hart, Robert S. Feranec
Software Mentions: 2
Published: over 4 years ago
10.1002/ece3.4998
High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary
Cited by: 9
Author(s): Angelina Nunziata, Laura Benedetti, Ilaria Marchioni, C. Cervelli
Software Mentions: 2
Published: over 5 years ago
10.1002/ece3.6631
DNA barcode assessment and population structure of aphidophagous hoverfly <i>Sphaerophoria scripta</i>: Implications for conservation biological control
Cited by: 4
Author(s): Nemanja Gojković, Ljubinka Francuski, Jasmina Ludoški, Vesna Milankov
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-017-04934-9
Large perturbations in CO2 flux and subsequent chemosynthesis are induced in agricultural soil by the addition of elemental sulfur
Cited by: 8
Author(s): Brian P. Kelleher, Paul Flanagan, Kris M. Hart, André J. Simpson, Seth F. Oppenheimer, Brian T. Murphy, Shane S. O’Reilly, Sean Jordan, Anthony Grey, A. D. Ibrahim, Christopher C. R. Allen
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-06714-x
Bottom-up effects on herbivore-induced plant defences: a case study based on compositional patterns of rhizosphere microbial communities
Cited by: 14
Author(s): Emilio Benítez, Daniel Paredes, Estefanı́a Rodrı́guez, Diana Aldana, Mónica González, R. Nogales, Mercedes Campos, Beatriz González Moreno
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-07251-3
The East Asian summer monsoon variability over the last 145 years inferred from the Shihua Cave record, North China
Cited by: 42
Author(s): Xianglei Li, Hai Cheng, Liangcheng Tan, Fengmei Ban, Ashish Sinha, Wuhui Duan, Hanying Li, Haiwei Zhang, Youfeng Ning, Gayatri Kathayat, R. Lawrence Edwards
Software Mentions: 2
Published: over 7 years ago
10.1002/ece3.2714
Does thinning-induced gap size result in altered soil microbial community in pine plantation in eastern Tibetan Plateau?
Cited by: 31
Author(s): Bing Yang, Xiaoyun Pang, Bin Hu, Weikai Bao, Guangming Tian
Software Mentions: 2
Published: over 7 years ago
10.1038/s41598-017-09073-9
Correlations of age and growth rate with microbiota composition in Atlantic cod (Gadus morhua) larvae
Cited by: 10
Author(s): Ly T. T. Trinh, Ingrid Bakke, Ôlav Vadstein
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0029581
Shared Pattern of Endocranial Shape Asymmetries among Great Apes, Anatomically Modern Humans, and Fossil Hominins
Cited by: 66
Author(s): Antoine Balzeau, Emmanuel Gilissen, Dominique Grimaud-Hervé
Software Mentions: 2
Published: almost 13 years ago
10.1038/s41598-017-12092-1
De novo transcriptome of the cosmopolitan dinoflagellate Amphidinium carterae to identify enzymes with biotechnological potential
Cited by: 51
Author(s): Chiara Lauritano, Danièle De Luca, Alberto Ferrarini, C. Avanzato, Andrea Minio, Francesco Esposito, Adrianna Ianora
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0077527
Availability of Ectomycorrhizal Fungi to Black Spruce above the Present Treeline in Eastern Labrador
Cited by: 19
Author(s): Laura Reithmeier, Gavin Kernaghan
Software Mentions: 2
Published: about 11 years ago
10.1038/s41598-017-15345-1
Short-term effects of non-grazing on plants, soil biota and aboveground-belowground links in Atlantic mountain grasslands
Cited by: 15
Author(s): Lur Epelde, Anders Lanzén, Iker Mijangos, Estibaliz Sarrionandia, Mikel Anza, Carlos Garbisu
Software Mentions: 2
Published: about 7 years ago