bioconductor: PAST | Projects | Ecosyste.ms: Papers

10.1038/s41598-020-65031-y

Metagenomic analysis of an urban resistome before and after wastewater treatment
Cited by: 50
Author(s): Felipe Lira, Ivone Vaz‐Moreira, Javier Tamames, Célia M. Manaia, José Luis Martínez
Software Mentions: 3
Published: over 6 years ago

10.7717/peerj-cs.249

Landmark-based homologous multi-point warping approach to 3D facial recognition using multiple datasets
Cited by: 4
Author(s): Olalekan Agbolade, Azree Nazri, Razali Yaakob, Abdul Ghani, Yoke Kqueen Cheah
Software Mentions: 3
Published: almost 7 years ago

10.3390/plants10010104

CRISPR/Cas9-Mediated Knockout of HOS1 Reveals Its Role in the Regulation of Secondary Metabolism in Arabidopsis thaliana
Cited by: 14
Author(s): Yuri N. Shkryl, Yulia A. Yugay, Т.В. Авраменко, Valeria P. Grigorchuk, Tatiana Y. Gorpenchenko, Olga Grischenko, Victor P. Bulgakov
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41598-020-61420-5

Eosinophil accumulation in postnatal lung is specific to the primary septation phase of development
Cited by: 17
Author(s): Lucas F. Loffredo, Mackenzie E. Coden, Brian M. Jeong, Matthew T. Walker, Kishore R. Anekalla, Ton C. Doan, Raul I. Rodriguez, M.J. Browning, Ki-Won Nam, James J. Lee, Hiam Abdala‐Valencia, Sergejs Berdnikovs
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-020-73540-z

Stable isotope evidence for dietary diversification in the pre-Columbian Amazon
Cited by: 12
Author(s): André Carlo Colonese, Rachel Winter, Rafael Brandi, Thiago Fossile, Ricardo Fernandes, Silvia Soncin, Krista McGrath, Matthew von Tersch, Arkley Marques Bandeira
Software Mentions: 3
Published: about 6 years ago

10.7717/peerj.1702

Influence of whole-wheat consumption on fecal microbial community structure of obese diabetic mice
Cited by: 34
Author(s): José F. García-Mazcorro, Ivan Ivanov, David A. Mills, Giuliana Noratto
Software Mentions: 3
Published: over 10 years ago

10.7717/peerj.3511

The identification of Oligo-Miocene mammalian palaeocommunities from the Riversleigh World Heritage Area, Australia and an appraisal of palaeoecological techniques
Cited by: 8
Author(s): Troy Myers, Karen H. Black, Michael Archer, Suzanne J. Hand
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-019-51321-7

Holocene vegetation patterns in southern Lithuania indicate astronomical forcing on the millennial and centennial time scales
Cited by: 10
Author(s): Andrej Spiridonov, Lauras Balakauskas, Robertas Stankevič, Gražyna Kluczynska, Laura Gedminienė, Miglė Stančikaitė
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-019-49097-x

Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting
Cited by: 16
Author(s): Martina Grdiša, Ivan Radosavljević, Zlatko Liber, Gjoshe Stefkov, Parthenopi Ralli, Paschalina Chatzopoulou, Klaudija Carović‐Stanko, Zlatko Šatović
Software Mentions: 3
Published: about 7 years ago

10.7717/peerj.8571

Gynodioecy in the common spindle tree (Euonymus europaeusL.) involves differences in the asymmetry of corolla shapes between sexually differentiated flowers
Cited by: 3
Author(s): Jiří Neustupa
Software Mentions: 3
Published: over 6 years ago

10.1186/s12859-020-3497-7

A novel investigation of the effect of iterations in sliding semi-landmarks for 3D human facial images
Cited by: 1
Author(s): Azree Nazri, Olalekan Agbolade, Razali Yaakob, Abdul Ghani, Yoke Kqueen Cheah
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-019-50624-z

Diversity, Co-occurrence and Implications of Fungal Communities in Wastewater Treatment Plants
Cited by: 66
Author(s): Hailemariam Abrha Assress, Ramganesh Selvarajan, Hlengilizwe Nyoni, Khayalethu Ntushelo, Bhekie B. Mamba, Titus A.M. Msagati
Software Mentions: 3
Published: about 7 years ago

10.1038/s41598-020-78934-7

DNA metabarcoding uncovers fungal diversity in soils of protected and non-protected areas on Deception Island, Antarctica
Cited by: 30
Author(s): Luiz Henrique Rosa, Thamar Holanda da Silva, Mayara Baptistucci Ogaki, Otávio Henrique Bezerra Pinto, Michael Stech, Peter Convey, Micheline Carvalho‐Silva, Carlos A. Rosa, Paulo Eduardo Aguiar Saraiva Câmara
Software Mentions: 3
Published: almost 6 years ago

10.1038/srep12179

Resilience and receptivity worked in tandem to sustain a geothermal mat community amidst erratic environmental conditions
Cited by: 18
Author(s): Wriddhiman Ghosh, Chayan Roy, Ranjit Roy, Pravin Nilawe, Amartya Mukherjee, Prabir Kumar Haldar, Neeraj Chauhan, Sabyasachi Bhattacharya, Atima Agarwal, Ashish George, Prosenjit Pyne, Sanjay K. Mandal, Moidu Jameela Rameez, Goutam Bala
Software Mentions: 3
Published: over 11 years ago

10.1098/rsos.170899

Still slow, but even steadier: an update on the evolution of turtle cranial disparity interpolating shapes along branches
Cited by: 8
Author(s): Christian Foth, Eduardo Ascarrunz, Walter G. Joyce
Software Mentions: 3
Published: about 9 years ago

10.1038/srep12872

Geochemical influences and mercury methylation of a dental wastewater microbiome
Cited by: 17
Author(s): Asha Rani, Karl J. Rockne, James L. Drummond, Muntasar Al-Hinai, Ravi Ranjan
Software Mentions: 3
Published: about 11 years ago

10.1098/rspb.2014.2114

Cranial biomechanics underpins high sauropod diversity in resource-poor environments
Cited by: 57
Author(s): David Button, Emily J. Rayfield, Paul M. Barrett
Software Mentions: 3
Published: almost 12 years ago

10.7717/peerj.7970

Reconstructing the archosaur radiation using a Middle Triassic archosauriform tooth assemblage from Tanzania
Cited by: 7
Author(s): Devin K. Hoffman, Hunter R. Edwards, Paul M. Barrett, Sterling J. Nesbitt
Software Mentions: 3
Published: almost 7 years ago

10.3390/insects12020127

Biocontrol of Melolontha spp. Grubs in Organic Strawberry Plantations by Entomopathogenic Fungi as Affected by Environmental and Metabolic Factors and the Interaction with Soil Microbial Biodiversity
Cited by: 8
Author(s): Małgorzata Tartanus, Ewa M. Furmanczyk, Loredana Canfora, Flavia Pinzari, C. Tkaczuk, A. Majchrowska-Safaryan, Eligio Malusà
Software Mentions: 3
Published: over 5 years ago

10.1038/srep16350

Sample storage conditions significantly influence faecal microbiome profiles
Cited by: 329
Author(s): Jocelyn M. Choo, Lex E. X. Leong, Geraint B. Rogers
Software Mentions: 3
Published: almost 11 years ago

10.3389/fmicb.2017.00715

Relative Abundance and Diversity of Bacterial Methanotrophs at the Oxic–Anoxic Interface of the Congo Deep-Sea Fan
Cited by: 11
Author(s): Sandrine Bessette, Yann Moalic, Sébastien Gautey, Françoise Lesongeur, Anne Godfroy, Laurent Toffin
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2017.02319

Taxonomic and Functional Differences between Microbial Communities in Qinghai Lake and Its Input Streams
Cited by: 50
Author(s): Ze Ren, Fang Wang, Xiaodong Qu, James J. Elser, Yang Liu, Limin Chu
Software Mentions: 3
Published: almost 9 years ago

10.1007/s00027-019-0643-2

Importance of mixotrophic flagellates during the ice-free season in lakes located along an elevational gradient
Cited by: 14
Author(s): Anna Waibel, Hannes Peter, Rubén Sommaruga
Software Mentions: 3
Published: over 7 years ago

10.7717/peerj.4174

Is there a link between aging and microbiome diversity in exceptional mammalian longevity?
Cited by: 26
Author(s): Graham M. Hughes, John Leech, Sébastien J. Puechmaille, Jose V. Lopez, Emma C. Teeling
Software Mentions: 3
Published: almost 9 years ago

10.1186/1471-2180-12-122

Metagenome analyses of corroded concrete wastewater pipe biofilms reveal a complex microbial system
Cited by: 82
Author(s): Vicente Gomez-Alvarez, Randy P. Revetta, Jorge W. Santo Domingo
Software Mentions: 3
Published: over 14 years ago

10.3389/fmicb.2018.00002

Transcriptome Analysis of a Bloom-Forming Cyanobacterium Microcystis aeruginosa during Ma-LMM01 Phage Infection
Cited by: 25
Author(s): Daichi Morimoto, Shigeko Kimura, Yoshihiko Sako, Takashi Yoshida
Software Mentions: 3
Published: almost 9 years ago

10.7717/peerj.1589

Cranial ontogenetic variation in early saurischians and the role of heterochrony in the diversification of predatory dinosaurs
Cited by: 40
Author(s): Christian Foth, Brandon P Hedrick, Martín D. Ezcurra
Software Mentions: 3
Published: almost 11 years ago

10.1186/1756-3305-6-228

The compositional landscape of minicircle sequences isolated from active lesions and scars of American cutaneous leishmaniasis
Cited by: 5
Author(s): Eduardo Henrique Gomes Rodrigues, Fábia Carla da Silva Soares, Roberto P. Werkhäuser, Maria Edileuza Felinto de Brito, Octávio Fernandes, Frederico G. C. Abath, Adeílton Brandão
Software Mentions: 3
Published: about 13 years ago

10.3389/fmicb.2020.00285

The Distribution of Bathyarchaeota in Surface Sediments of the Pearl River Estuary Along Salinity Gradient
Cited by: 27
Author(s): Dayu Zou, Jie Pan, Zongbao Liu, Chuanlun Zhang, Hongbin Liu, Meng Li
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2016.00462

Carrageenan Gum and Adherent Invasive Escherichia coli in a Piglet Model of Inflammatory Bowel Disease: Impact on Intestinal Mucosa-associated Microbiota
Cited by: 41
Author(s): Peris M. Munyaka, Shadi Sepehri, Jean–Eric Ghia, Ehsan Khafipour
Software Mentions: 3
Published: over 10 years ago

10.3389/fmicb.2019.00594

High-Throughput Illumina MiSeq Amplicon Sequencing of Yeast Communities Associated With Indigenous Dairy Products From Republics of Benin and Niger
Cited by: 14
Author(s): Philippe Sessou, Santosh Keisam, Ngangyola Tuikhar, Mariama Gagara, Souaïbou Farougou, Kumaraswamy Jeyaram
Software Mentions: 3
Published: over 7 years ago

10.1186/s12859-014-0361-7

Tools for T-RFLP data analysis using Excel
Cited by: 15
Author(s): Nils Johan Fredriksson, Malte Hermansson, Britt‐Marie Wilén
Software Mentions: 3
Published: almost 12 years ago

10.1098/rspb.2013.1865

The radiation of cynodonts and the ground plan of mammalian morphological diversity
Cited by: 90
Author(s): Marcello Ruta, Jennifer Botha‐Brink, Stephen Α. Mitchell, Michael J. Benton
Software Mentions: 3
Published: about 13 years ago

10.1098/rspb.2019.0296

Network modularity influences plant reproduction in a mosaic tropical agroecosystem
Cited by: 19
Author(s): Manu E. Saunders, Romina Rader
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2018.01664

Microbial Community Changes in a Chlorinated Solvents Polluted Aquifer Over the Field Scale Treatment With Poly-3-Hydroxybutyrate as Amendment
Cited by: 26
Author(s): Bruna Matturro, Lucia Pierro, Emanuela Frascadore, Marco Petrangeli Papini, Simona Rossetti
Software Mentions: 3
Published: over 8 years ago

10.1098/rsos.181317

Mechanical significance of morphological variation in diprotodont incisors
Cited by: 3
Author(s): Philip James Rencher Morris, Philip G. Cox, Samuel N. Cobb
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2019.00908

Bacterioplankton Community Composition Along Environmental Gradients in Lakes From Byers Peninsula (Maritime Antarctica) as Determined by Next-Generation Sequencing
Cited by: 25
Author(s): Antonio Picazo, Carlos Rochera, Juan Antonio Villaescusa, Javier Miralles‐Lorenzo, David Velázquez, Antonio Quesada, Antonio Camacho
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2018.01251

Gut Bacterial Communities of Dendroctonus valens and Monoterpenes and Carbohydrates of Pinus tabuliformis at Different Attack Densities to Host Pines
Cited by: 7
Author(s): Dandan Xu, Letian Xu, Fangyuan Zhou, Bo Wang, Shanshan Wang, Min Lü, Jianghua Sun
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2016.00440

Rhizosphere Microbiomes of European + Seagrasses Are Selected by the Plant, But Are Not Species Specific
Cited by: 113
Author(s): Catarina Cúcio, Aschwin H. Engelen, Rodrigo Costa, Gerard Muyzer
Software Mentions: 3
Published: over 10 years ago

10.1186/s42523-021-00077-5

Ceftiofur reduced Fusobacterium leading to uterine microbiota alteration in dairy cows with metritis
Cited by: 9
Author(s): Seong-Jeub Jeon, Federico Cunha, R. Daetz, R.C. Bicalho, Svetlana Lima, Klibs N. Galvão
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2019.02271

Distinct Successions of Common and Rare Bacteria in Soil Under Humic Acid Amendment – A Microcosm Study
Cited by: 30
Author(s): Pengfa Li, Jia Liu, Chunyu Jiang, Meng Wu, Ming Liu, Zhongpei Li
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2019.02907

A New High Throughput Sequencing Assay for Characterizing the Diversity of Natural Vibrio Communities and Its Application to a Pacific Oyster Mortality Event
Cited by: 22
Author(s): William L. King, Nachshon Siboni, Tim Kahlke, Timothy Green, Maurizio Labbate, Justin R. Seymour
Software Mentions: 3
Published: almost 7 years ago

10.7717/peerj.5974

Genetic and phenotypic differentiation of lumpfish (Cyclopterus lumpus) across the North Atlantic: implications for conservation and aquaculture
Cited by: 23
Author(s): Benjamin Alexander Whittaker, Sofía Consuegra, Carlos García de Leániz
Software Mentions: 3
Published: almost 8 years ago

10.3389/fmicb.2018.00076

Fungal Genetics and Functional Diversity of Microbial Communities in the Soil under Long-Term Monoculture of Maize Using Different Cultivation Techniques
Cited by: 29
Author(s): Anna Gałązka, Jarosław Grządziel
Software Mentions: 3
Published: almost 9 years ago

10.1038/s41598-019-52395-z

Environmental and ecological factors mediate taxonomic composition and body size of polyplacophoran assemblages along the Peruvian Province
Cited by: 6
Author(s): Christian M. Ibáñez, Melany Waldisperg, Felipe I. Torres, Sergio A. Carrasco, Javier Sellanes, M. Cecilia Pardo‐Gandarillas, Julia D. Sigwart
Software Mentions: 3
Published: almost 7 years ago

10.1038/srep18563

Gut bacterial diversity of the tribes of India and comparison with the worldwide data
Cited by: 106
Author(s): Madhusmita Dehingia, Kanchal Thangjam devi, Narayan Chandra Talukdar, Rupjyoti Talukdar, Nageshwar Reddy, Sharmila S. Mande, Manab Deka, Mojibur R. Khan
Software Mentions: 3
Published: almost 11 years ago

10.1038/s41598-020-58587-2

Microbial Diversity and Metabolite Profiles of Palm Wine Produced From Three Different Palm Tree Species in Côte d’Ivoire
Cited by: 26
Author(s): Théodore N. Djeni, Karen H. Kouame, Francine D. M. Ake, Laurent S. T. Amoikon, Marcellin Koffi Djè, Kumaraswamy Jeyaram
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2018.02120

Determinants of Deadwood-Inhabiting Fungal Communities in Temperate Forests: Molecular Evidence From a Large Scale Deadwood Decomposition Experiment
Cited by: 39
Author(s): Witoon Purahong, Tesfaye Wubet, Guillaume Lentendu, Björn Hoppe, Katalee Jariyavidyanont, Tobias Arnstadt, Kristin Baber, Peter Otto, Harald Kellner, Martin Hofrichter, Jürgen Bauhus, Wolfgang W. Weisser, Dirk Krüger, Ernst Detlef Schulze, Tiemo Kahl, François Buscot
Software Mentions: 3
Published: about 8 years ago

10.1128/AEM.02885-19

Nutrient Level Determines Biofilm Characteristics and Subsequent Impact on Microbial Corrosion and Biocide Effectiveness
Cited by: 48
Author(s): Silvia J. Salgar-Chaparro, Kateřina Lepková, Thunyaluk Pojtanabuntoeng, Adam Darwin, Laura L. Machuca
Software Mentions: 3
Published: over 6 years ago

10.1186/s12864-017-3606-9

The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
Cited by: 268
Author(s): Ignazio Verde, Jerry Jenkins, Luca Dondini, Simona Micali, Giulia Pagliarani, Elisa Vendramin, Roberta Paris, Valeria Aramini, Laura Gazza, Laura Rossini, D. Bassi, Michela Troggio, Shengqiang Shu, Jane Grimwood, Stefano Tartarini, Maria Teresa Dettori, Jeremy Schmutz
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2021.629169

Targeting the Active Rhizosphere Microbiome of Trifolium pratense in Grassland Evidences a Stronger-Than-Expected Belowground Biodiversity-Ecosystem Functioning Link
Cited by: 15
Author(s): Sara Fareed Mohamed Wahdan, Anna Heintz‐Buschart, Chakriya Sansupa, Benjawan Tanunchai, Yuting Wu, Martin Schädler, Matthias Noll, Witoon Purahong, François Buscot
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2018.00578

Benthic Algal Community Structures and Their Response to Geographic Distance and Environmental Variables in the Qinghai-Tibetan Lakes With Different Salinity
Cited by: 23
Author(s): Jian Yang, Hongchen Jiang, Wen Liu, Beichen Wang
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-020-67512-6

Impact of habitat alteration on amphibian diversity and species composition in a lowland tropical rainforest in Northeastern Leyte, Philippines
Cited by: 8
Author(s): Syrus Cesar Decena, Carlo Aguirre Avorque, Ian Christopher Pacle Decena, Pol Delbert Asis, Bryan Pacle
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2016.00426

The Features of Fecal and Ileal Mucosa-Associated Microbiota in Dairy Calves during Early Infection with Mycobacterium avium Subspecies paratuberculosis
Cited by: 42
Author(s): Hooman Derakhshani, Jeroen De Buck, Rienske A.R. Mortier, Herman W. Barkema, Denis O. Krause, Ehsan Khafipour
Software Mentions: 3
Published: over 10 years ago

10.3390/microorganisms9010075

On-Site Blackwater Treatment Fosters Microbial Groups and Functions to Efficiently and Robustly Recover Carbon and Nutrients
Cited by: 3
Author(s): Eiko E. Kuramae, Maurício R. Dimitrov, Gustavo H. R. da Silva, Adriano Reis Lucheta, Lucas William Mendes, Ronildson Lima Luz, Louise E. M. Vet, Tânia V. Fernandes
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2015.01300

Forest Management Type Influences Diversity and Community Composition of Soil Fungi across Temperate Forest Ecosystems
Cited by: 117
Author(s): Kezia Goldmann, Ingo Schöning, François Buscot, Tesfaye Wubet
Software Mentions: 3
Published: almost 11 years ago

10.1007/s00248-016-0775-z

Nitrate and the Origin of Saliva Influence Composition and Short Chain Fatty Acid Production of Oral Microcosms
Cited by: 50
Author(s): Jessica E. Koopman, Mark J. Buijs, Bernd W. Brandt, Bart J. F. Keijser, Wim Crielaard, Egija Zaura
Software Mentions: 3
Published: over 10 years ago

10.1128/AEM.02189-20

Dichotomy between Regulation of Coral Bacterial Communities and Calcification Physiology under Ocean Acidification Conditions
Cited by: 8
Author(s): Amanda Shore, Rusty D. Day, Joseph Stewart, Colleen A. Burge
Software Mentions: 3
Published: over 5 years ago

10.1007/s00248-016-0748-2

Abundance and Diversity of Bacterial, Archaeal, and Fungal Communities Along an Altitudinal Gradient in Alpine Forest Soils: What Are the Driving Factors?
Cited by: 254
Author(s): J.A. Siles, Rosa Margesin
Software Mentions: 3
Published: over 10 years ago

10.1007/s00248-020-01565-y

Canopy Position Has a Stronger Effect than Tree Species Identity on Phyllosphere Bacterial Diversity in a Floodplain Hardwood Forest
Cited by: 12
Author(s): Martina Herrmann, Patricia Geesink, Ronny Richter, Kirsten Küsel
Software Mentions: 3
Published: about 6 years ago

10.1007/s00248-020-01543-4

Unveiling the Microbiota Diversity of the Xerophyte Argania spinosa L. Skeels Root System and Residuesphere
Cited by: 6
Author(s): Francesca Mapelli, Valentina Riva, Lorenzo Vergani, Redouane Choukr‐Allah, Sara Borin
Software Mentions: 3
Published: over 6 years ago

10.1002/ece3.1555

Size matters: nest colonization patterns for twig‐nesting ants
Cited by: 31
Author(s): Estelí Jiménez‐Soto, Stacy M. Philpott
Software Mentions: 3
Published: over 11 years ago

10.1002/ece3.5024

Availability of food resources and habitat structure shape the individual‐resource network of a Neotropical marsupial
Cited by: 15
Author(s): Nícholas F. de Camargo, Hernani Oliveira, Juliana Fernandes Ribeiro, A. J. A. de Camargo, Emerson M. Vieira
Software Mentions: 3
Published: over 7 years ago

10.1002/ece3.4105

Strong associations between plant genotypes and bacterial communities in a natural salt marsh
Cited by: 24
Author(s): Gregory P. Zogg, Steven E. Travis, Daniel A. Brazeau
Software Mentions: 3
Published: over 8 years ago

10.1128/mSphereDirect.00211-19

Laryngotracheal Microbiota in Adult Laryngotracheal Stenosis
Cited by: 30
Author(s): Alexander T. Hillel, Sharon Tang, Camila Carlos, Joseph H. Skarlupka, Madhu Gowda, Linda X. Yin, Kevin Motz, Cameron R. Currie, Garret Suen, Susan L. Thibeault
Software Mentions: 3
Published: over 7 years ago

10.3390/microorganisms9081704

The Sisal Virome: Uncovering the Viral Diversity of Agave Varieties Reveals New and Organ-Specific Viruses
Cited by: 3
Author(s): Gabriel Quintanilha-Peixoto, Paula Luize Camargos Fonseca, Fábio Trigo Raya, Marina Püpke Marone, Dener Eduardo Bortolini, Piotr A. Mieczkowski, Roenick Proveti Olmo, Marcelo Falsarella Carazzolle, Christian A. Voigt, Ana Cristina Fermino Soares, Gonçalo Amarante Guimarães Pereira, Aristóteles Goés-Neto, Eric Roberto Guimarães Rocha Aguiar
Software Mentions: 3
Published: about 5 years ago

10.3390/microorganisms9051024

Isoprene-Degrading Bacteria from Soils Associated with Tropical Economic Crops and Framework Forest Trees
Cited by: 2
Author(s): Toungporn Uttarotai, Boyd A. McKew, Farid Benyahia, J. Colin Murrell, Wuttichai Mhuantong, Sunanta Wangkarn, Thararat Chitov, Sakunnee Bovonsombut, Terry J. McGenity
Software Mentions: 3
Published: over 5 years ago

10.3390/molecules26061546

A Novel Validated Injectable Colistimethate Sodium Analysis Combining Advanced Chemometrics and Design of Experiments
Cited by: 3
Author(s): Ioanna Dagla, Anthony Tsarbopoulos, Evagelos Gikas
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0032093

Spatial Scales of Bacterial Diversity in Cold-Water Coral Reef Ecosystems
Cited by: 39
Author(s): Sandra Schöttner, Christian Wild, Friederike Hoffmann, Antje Boetius, Alban Ramette
Software Mentions: 3
Published: over 14 years ago

10.3389/fmicb.2017.02511

Succession of Bacterial Communities in a Seasonally Stratified Lake with an Anoxic and Sulfidic Hypolimnion
Cited by: 42
Author(s): Muhe Diao, Ruben Sinnige, Karsten Kalbitz, Jef Huisman, Gerard Muyzer
Software Mentions: 3
Published: almost 9 years ago

10.3389/fmicb.2013.00253

Plant soil interactions alter carbon cycling in an upland grassland soil
Cited by: 22
Author(s): Bruce C. Thomson, Nicholas J. Ostle, Niall P. McNamara, Simon Oakley, Andrew S. Whiteley, Mark Bailey, Robert I. Griffiths
Software Mentions: 3
Published: almost 14 years ago

10.3390/microorganisms8111708

Bacterial Communities in the Rhizosphere and Phyllosphere of Halophytes and Drought-Tolerant Plants in Mediterranean Ecosystems
Cited by: 11
Author(s): Savvas Genitsaris, Natassa Stefanidou, Kleopatra Leontidou, Theodora Matsi, Katerina Karamanoli, Ιfigeneia Mellidou
Software Mentions: 3
Published: about 6 years ago

10.1002/ece3.1950

Molecular and iridescent feather reflectance data reveal recent genetic diversification and phenotypic differentiation in a cloud forest hummingbird
Cited by: 19
Author(s): Juan Francisco Ornelas, Clementina González, Blanca E. Hernández‐Baños, Jaime García‐Moreno
Software Mentions: 3
Published: almost 11 years ago

10.1186/s12862-017-1038-4

Historical biogeography and ecological niche modelling of the Asimina-Disepalum clade (Annonaceae): role of ecological differentiation in Neotropical-Asian disjunctions and diversification in Asia
Cited by: 13
Author(s): Pui-Sze Li, Daniel C. Thomas, Richard M. Saunders
Software Mentions: 3
Published: about 9 years ago

10.1002/ece3.908

Expanding the understanding of local community assembly in adaptive radiations
Cited by: 5
Author(s): Katharina C. Wollenberg, Michael Veith, Stefan Lötters
Software Mentions: 3
Published: almost 13 years ago

10.1186/s12862-015-0425-y

Cytotype diversity and genome size variation in Knautia (Caprifoliaceae, Dipsacoideae)
Cited by: 29
Author(s): Božo Frajman, Ivana Rešetnik, Hanna Weiss‐Schneeweiss, Friedrich Ehrendorfer
Software Mentions: 3
Published: over 11 years ago

10.1186/s40168-021-00999-x

Genomic evidence for sulfur intermediates as new biogeochemical hubs in a model aquatic microbial ecosystem
Cited by: 25
Author(s): Adrien Vigneron, Perrine Cruaud, Alexander I. Culley, Raoul-Marie Couture, Connie Lovejoy, Warwick F. Vincent
Software Mentions: 3
Published: over 5 years ago

10.1002/ece3.5713

Rapid redistribution of agricultural land alters avian richness, abundance, and functional diversity
Cited by: 6
Author(s): Stephen Pringle, Ngoni Chiweshe, Peter Steward, Peter J. Mundy, Martin Dallimer
Software Mentions: 3
Published: about 7 years ago

10.3390/microorganisms8121984

Temporal Resistome and Microbial Community Dynamics in an Intensive Aquaculture Facility with Prophylactic Antimicrobial Treatment
Cited by: 15
Author(s): Hemant J. Patil, Joao Gatica, Avihai Zolti, Ayana Benet-Perelberg, Alon Naor, Barak Dror, Ashraf Al-Ashhab, Sophi Marman, Nur A. Hasan, Rita R. Colwell, Daniel Sher, Dror Minz, Eddie Cytryn
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0059927

Pyrosequencing Reveals High-Temperature Cellulolytic Microbial Consortia in Great Boiling Spring after In Situ Lignocellulose Enrichment
Cited by: 39
Author(s): Joseph P. Peacock, Jesse Cole, Senthil K. Murugapiran, Jeremy A. Dodsworth, James S. Fisher, Duane P. Moser, Brian P. Hedlund
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0208406

Extracellular polymeric substances (EPS) producing and oil degrading bacteria isolated from the northern Gulf of Mexico
Cited by: 46
Author(s): Hernando P. Bacosa, Manoj Kamalanathan, Meng Hsuen Chiu, Shih Ming Tsai, Luni Sun, Jessica M. Labonté, Kathleen A. Schwehr, David Hala, Peter H. Santschi, Wei Chun Chin, Antonietta Quigg
Software Mentions: 3
Published: almost 8 years ago

10.1186/s40168-018-0597-y

Rhizosheath microbial community assembly of sympatric desert speargrasses is independent of the plant host
Cited by: 95
Author(s): Ramona Marasco, María J. Mosqueira, Marco Fusi, Jean‐Baptiste Ramond, Giuseppe Merlino, Jenny Marie Booth, Gillian Maggs‐Kölling, Don A. Cowan, Daniele Daffonchio
Software Mentions: 3
Published: almost 8 years ago

10.1186/s40168-017-0284-4

Transplanted human fecal microbiota enhanced Guillain Barré syndrome autoantibody responses after Campylobacter jejuni infection in C57BL/6 mice
Cited by: 28
Author(s): Phillip T. Brooks, Kelsey A. Brakel, Julia A. Bell, Christopher E. Bejcek, Trey E. Gilpin, Jean M. Brudvig, Linda S. Mansfield
Software Mentions: 3
Published: about 9 years ago

10.1002/ece3.8075

High genetic and epigenetic variation of transposable elements: Potential drivers to rapid adaptive evolution for the noxious invasive weed Mikania micrantha
Cited by: 5
Author(s): Yingjuan Su, Qiqi Huang, Zhen Wang, Ting Wang
Software Mentions: 3
Published: about 5 years ago

10.1002/ece3.5656

To remain or leave: Dispersal variation and its genetic consequences in benthic freshwater invertebrates
Cited by: 2
Author(s): Paolo Ruggeri, Ellen Pasternak, Beth Okamura
Software Mentions: 3
Published: about 7 years ago

10.1186/s40168-019-0753-z

The composition and functional protein subsystems of the human nasal microbiome in granulomatosis with polyangiitis: a pilot study
Cited by: 20
Author(s): Josef Wagner, Ewan M. Harrison, Marcos Martinez Del Pero, Beth Blane, Gert Mayer, Johannes Leierer, Seerapani Gopaluni, Mark A. Holmes, Julian Parkhill, Sharon J. Peacock, David Jayne, Andreas Kronbichler
Software Mentions: 3
Published: about 7 years ago

10.1186/s12862-018-1308-9

Seed size evolution and biogeography of Plukenetia (Euphorbiaceae), a pantropical genus with traditionally cultivated oilseed species
Cited by: 16
Author(s): Warren M. Cardinal‐McTeague, Kenneth J. Wurdack, Erin M. Sigel, Lynn J. Gillespie
Software Mentions: 3
Published: almost 8 years ago

10.3390/cells8060623

Functionally Significant Features in the 5′ Untranslated Region of the ABCA1 Gene and Their Comparison in Vertebrates
Cited by: 10
Author(s): Pavel Dvořák, Sarah Leupen, Pavel Souček
Software Mentions: 3
Published: over 7 years ago

10.1128/MRA.00757-19

The Bacterial Community in the Western Region of North Pacific Intermediate Water
Cited by: 0
Author(s): Maki Teramoto, Ayumi Komatsu, Kouhei Ohnishi
Software Mentions: 3
Published: about 7 years ago

10.1002/mbo3.856

Potential links between wood‐inhabiting and soil fungal communities: Evidence from high‐throughput sequencing
Cited by: 12
Author(s): Witoon Purahong, Katherina A. Pietsch, Helge Bruelheide, Christian Wirth, François Buscot, Tesfaye Wubet
Software Mentions: 3
Published: over 7 years ago

10.1093/aobpla/plab013

Male sterility significantly elevates shape variation and fluctuating asymmetry of zygomorphic corolla in gynodioecious Glechoma hederacea (Lamiaceae)
Cited by: 4
Author(s): Jiří Neustupa, K. E. Woodard
Software Mentions: 3
Published: over 5 years ago

10.3390/cells9122700

Differentially Expressed Genes Shared by Two Distinct Cytoplasmic Male Sterility (CMS) Types of Silene vulgaris Suggest the Importance of Oxidative Stress in Pollen Abortion
Cited by: 6
Author(s): Manuela Krüger, Oushadee A. J. Abeyawardana, Claudia Krüger, Miloslav Juříček, Helena Štorchová
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0124146

The Role of Temporal Abundance Structure and Habitat Preferences in the Survival of Conodonts during the Mid-Early Silurian Ireviken Mass Extinction Event
Cited by: 13
Author(s): Andrej Spiridonov, Antanas Brazauskas, Sigitas Radzevičius
Software Mentions: 3
Published: over 11 years ago

10.1371/journal.pone.0173029

Exploring gastric bacterial community in young pigs
Cited by: 8
Author(s): Vincenzo Motta, Paolo Trevisi, Francesca Bertolini, Anisa Ribani, Giuseppina Schiavo, Luca Fontanesi, Paolo Bosi
Software Mentions: 3
Published: over 9 years ago

10.1264/jsme2.ME17135

Plant Materials are Sustainable Substrates Supporting New Technologies of Plant-Only-Based Culture Media for in vitro Culturing of the Plant Microbiota
Cited by: 20
Author(s): Elhussein F. Mourad, Mohamed S. Sarhan, Hassan-Sibroe A. Daanaa, Mennatullah Abdou, Ahmed Morsi, Mohamed R. Abdelfadeel, Hend Elsawey, Rahma A. Nemr, Mahmoud El-Tahan, M. Hamza, Mohamed Abbas, Hanan H. Youssef, Abdelhadi A. Abdelhadi, Wafaa M. Amer, M. B. E. Fayez, Silke Ruppel, N. A. Hegazi
Software Mentions: 3
Published: almost 9 years ago

10.1186/s13568-016-0284-y

Bacterial and archeal community composition in hot springs from Indo-Burma region, North-east India
Cited by: 51
Author(s): Amrita Kumari Panda, Satpal Singh Bisht, Surajit De Mandal, Nachimuthu Senthil Kumar
Software Mentions: 3
Published: almost 10 years ago

10.1186/s12862-020-01673-w

The roles of vicariance and isolation by distance in shaping biotic diversification across an ancient archipelago: evidence from a Seychelles caecilian amphibian
Cited by: 2
Author(s): Simon T. Maddock, Ronald A. Nussbaum, Julia J. Day, Leigh C. Latta, Mark P. Miller, Debra L. Fisk, Mark Wilkinson, Sara Rocha, David J. Gower, Michael E. Pfrender
Software Mentions: 3
Published: about 6 years ago

10.1002/mbo3.1179

Comparative analysis of the intestinal bacterial communities in mud crabScylla serratain South India
Cited by: 8
Author(s): Elina Apine, Praveen Rai, Madhu K. Mani, Vikram Subramanian, Indrani Karunasagar, Anna Godhe, Lucy M. Turner
Software Mentions: 3
Published: over 5 years ago

10.3390/microorganisms9081757

Seasonal Dynamics of Fungi Associated with Healthy and Diseased Pinus sylvestris Needles in Northern Europe
Cited by: 9
Author(s): Ahto Agan, Halvor Solheim, Kalev Adamson, Ari M. Hietala, Leho Tedersoo, Rein Drenkhan
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0105515

Soil Bacterial Community Response to Differences in Agricultural Management along with Seasonal Changes in a Mediterranean Region
Cited by: 85
Author(s): Annamaria Bevivino, Patrizia Paganin, Giovanni Bacci, Alessandro Florio, Maite Sampedro Pellicer, Maria Cristiana Papaleo, Alessio Mengoni, Luigi Ledda, Renato Fani, Antonio Benedetti, Claudia Dalmastri
Software Mentions: 3
Published: about 12 years ago

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