Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: GSEAlm

https://packages.ecosyste.ms/registries/bioconductor.org/packages/GSEAlm

Linear Model Toolset for Gene Set Enrichment Analysis
1 version
Latest release: about 1 year ago
39,521 downloads total

Papers Mentioning GSEAlm 6

10.1371/journal.pcbi.1002276

BeadArray Expression Analysis Using Bioconductor
Cited by: 50
Author(s): Matthew E. Ritchie, Mark J. Dunning, Mike L. Smith, Wei Shi, Andy G. Lynch
Software Mentions: 11
Published: almost 13 years ago

10.1093/bioinformatics/bts438

iBBiG: iterative binary bi-clustering of gene sets
Cited by: 44
Author(s): Daniel Gusenleitner, Eleanor Howe, Stefan Bentink, John Quackenbush, Aedín C. Culhane
Software Mentions: 8
Published: over 12 years ago

10.7717/peerj.3334

<i>pathVar:</i>a new method for pathway-based interpretation of gene expression variability
Cited by: 6
Author(s): Laurence de Torrenté, Stephanie M. Zimmerman, Deanne Taylor, Yu Hasegawa, Christine A. Wells, Jessica C. Mar
Software Mentions: 4
Published: over 7 years ago

10.1186/1471-2105-11-499

Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of metabolic syndrome
Cited by: 21
Author(s): Melissa J. Morine, Jolene McMonagle, Sinéad Toomey, Clare M. Reynolds, A.P. Moloney, Isobel Claire Gormley, Peadar Ó Gaora, Helen M. Roche
Software Mentions: 3
Published: about 14 years ago

10.1371/journal.pcbi.1002967

Differential Expression Analysis for Pathways
Cited by: 65
Author(s): Winston Haynes, Roger Higdon, Larissa Stanberry, Dwayne Collins, Eugene Kolker
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0025445

attract: A Method for Identifying Core Pathways That Define Cellular Phenotypes
Cited by: 37
Author(s): Jessica C. Mar, Nicholas Matigian, John Quackenbush, Christine A. Wells
Software Mentions: 2
Published: about 13 years ago