Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/bts438

https://doi.org/10.1093/bioinformatics/bts438

iBBiG: iterative binary bi-clustering of gene sets

Cited by: 44
Author(s): Daniel Gusenleitner, Eleanor Howe, Stefan Bentink, John Quackenbush, Aedín C. Culhane
Published: over 12 years ago

Software Mentions 8

bioconductor: GSEAlm

Linear Model Toolset for Gene Set Enrichment Analysis
Papers that mentioned: 6

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: iBBiG

Iterative Binary Biclustering of Genesets
Papers that mentioned: 3

cran: biclust

BiCluster Algorithms
Papers that mentioned: 19

cran: GSA

Gene Set Analysis
Papers that mentioned: 285

pypi: GSA

Python Package to implement Gravitational Search Algorithm. Documentation at:https://github.com/deepanshu1999/GSA
Papers that mentioned: 285

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893

pypi: stats

Calculator-style statistical functions
Papers that mentioned: 3,105