Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: FGNet
https://packages.ecosyste.ms/registries/bioconductor.org/packages/FGNet
Functional Gene Networks derived from biological enrichment analyses
1 version
Latest release: about 1 year ago
1 dependent package
24,801 downloads total
Papers Mentioning FGNet 7
10.1371/journal.pcbi.1007792
eXplainable Artificial Intelligence (XAI) for the identification of biologically relevant gene expression patterns in longitudinal human studies, insights from obesity researchCited by: 38
Author(s): Augusto Anguita‐Ruiz, Alberto Segura‐Delgado, Rafael Alcalá, Concepción M. Aguilera, Jesús Alcalá‐Fdez
Software Mentions: 23
Published: over 4 years ago
10.1016/j.csbj.2015.08.004
Dynamics in Transcriptomics: Advancements in RNA-seq Time Course and Downstream AnalysisCited by: 73
Author(s): Daniel Spies, Constance Ciaudo
Software Mentions: 11
Published: almost 10 years ago
10.1038/s41598-019-55434-x
QuantSeq. 3′ Sequencing combined with Salmon provides a fast, reliable approach for high throughput RNA expression analysisCited by: 28
Author(s): Susan M. Corley, Niamh M. Troy, Anthony Bosco, Marc R. Wilkins
Software Mentions: 9
Published: almost 5 years ago
10.1186/s12864-016-3230-0
Insights into the human mesenchymal stromal/stem cell identity through integrative transcriptomic profilingCited by: 47
Author(s): Beatriz Rosón-Burgo, Fermín Sánchez‐Guijo, Consuelo del Cañizo, Javier De Las Rivas
Software Mentions: 4
Published: about 8 years ago
10.1186/s12859-019-2886-2
Genes with human-specific features are primarily involved with brain, immune and metabolic evolutionCited by: 9
Author(s): Mainá Bitar, Stefanie Kuiper, Elizabeth O’Brien, Guy Barry
Software Mentions: 3
Published: about 5 years ago
10.1186/s12859-020-03784-z
GeneSetCluster: a tool for summarizing and integrating gene-set analysis resultsCited by: 12
Author(s): Ewoud Ewing, Nuria Planell-Picola, Maja Jagodic, David Green
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-019-54683-0
Elevated CO2 regulates the Wnt signaling pathway in mammals, Drosophila melanogaster and Caenorhabditis elegansCited by: 21
Author(s): Masahiko Shigemura, Emilia Lecuona, Martín Angulo, Laura A. Dada, Melanie B. Edwards, Lynn C. Welch, S. Marina Casalino‐Matsuda, Peter H. S. Sporn, István Vadász, Iiro Taneli Helenius, Gustavo A. Nader, Yosef Gruenbaum, Kfir Sharabi, Eoin P. Cummins, Cormac T. Taylor, Ankit Bharat, Cara J. Gottardi, Greg J. Beitel, Naftali Kaminski, G. R. Scott Budinger, Sergejs Berdnikovs, Jacob I. Sznajder
Software Mentions: 1
Published: about 5 years ago