Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: BCRANK
https://packages.ecosyste.ms/registries/bioconductor.org/packages/BCRANK
Predicting binding site consensus from ranked DNA sequences
1 version
Latest release: 7 months ago
34,722 downloads total
Papers Mentioning BCRANK 6
10.1038/srep38411
Distinct epigenomes in CD4+ T cells of newborns, middle-ages and centenariansCited by: 34
Author(s): Ming Zhao, Jian Qin, Hang Yin, Yixin Tan, Wei Liao, Qian Liu, Shuangyan Luo, Min He, Gongping Liang, Yajing Shi, Qing Zhang, Wenjun Cai, Guangliang Yin, Yin Zhou, Jing Wang, Mengying Li, Yi Huang, Aiyun Liu, Haijian Wu, Zhiyong Zhang, Qianjin Lu
Software Mentions: 8
Published: over 7 years ago
10.1186/s13073-016-0382-0
Non-coding single nucleotide variants affecting estrogen receptor binding and activityCited by: 5
Author(s): Amir Bahreini, Kevin M. Levine, Lucas Santana-Santos, Panayiotis V. Benos, Peilu Wang, Courtney Andersen, Steffi Oesterreich, Adrian V. Lee
Software Mentions: 6
Published: over 7 years ago
10.1128/mSystems.01006-20
Genome-Scale Mapping Reveals Complex Regulatory Activities of RpoN in Yersinia pseudotuberculosisCited by: 6
Author(s): A. K. M. Firoj Mahmud, K. Peter R. Nilsson, Anna Fahlgren, Roberto Navais, Rajdeep Choudhury, Kemal Avican, Maria Fällman
Software Mentions: 6
Published: over 3 years ago
10.1186/1471-2164-9-601
Combinatorial control of gene expression by the three yeast repressors Mig1, Mig2 and Mig3Cited by: 85
Author(s): Jakub Orzechowski Westholm, Niklas Nordberg, Eva Murén, Adam Ameur, Jan Komorowski, Hans Ronne
Software Mentions: 2
Published: over 15 years ago
10.3389/fpls.2016.01125
Comparative Transcriptional Profiling of Primed and Non-primed Rice Seedlings under Submergence StressCited by: 46
Author(s): Saddam Hussain, Hanqi Yin, Shaobing Peng, Faheem Ahmed Khan, Fahad Khan, Muhammad Sameeullah, Hafiz Athar Hussain, Jikun Huang, Kehui Cui, Lei Nie
Software Mentions: 1
Published: almost 8 years ago
10.1186/gb-2009-10-11-r129
Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seqCited by: 64
Author(s): Mehdi Motallebipour, Adam Ameur, Madhu Sudhan Reddy Bysani, Kalicharan Patra, Ola Wallerman, Jonathan Mangion, Melissa Barker, Kevin McKernan, Jan Komorowski, Claes Wadelius
Software Mentions: 1
Published: over 15 years ago