Projects: bioconductor: BCRANK
https://packages.ecosyste.ms/registries/bioconductor.org/packages/BCRANK
Predicting binding site consensus from ranked DNA sequences
1 version
Latest release: over 2 years ago
34,722 downloads total
Science Score: 75/100
Starting Score: 100 points
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (75)
Papers Mentioning BCRANK 6
10.1038/srep38411
Distinct epigenomes in CD4+ T cells of newborns, middle-ages and centenariansCited by: 34
Author(s): Ming Zhao, Jian Qin, Hang Yin, Yixin Tan, Wei Liao, Qian Liu, Shuangyan Luo, Min He, Gongping Liang, Yajing Shi, Qing Zhang, Wenjun Cai, Guangliang Yin, Yin Zhou, Jing Wang, Mengying Li, Yi Huang, Aiyun Liu, Haijian Wu, Zhiyong Zhang, Qianjin Lu
Software Mentions: 8
Published: over 9 years ago
10.1186/s13073-016-0382-0
Non-coding single nucleotide variants affecting estrogen receptor binding and activityCited by: 5
Author(s): Amir Bahreini, Kevin M. Levine, Lucas Santana-Santos, Panayiotis V. Benos, Peilu Wang, Courtney Andersen, Steffi Oesterreich, Adrian V. Lee
Software Mentions: 6
Published: over 9 years ago
10.1128/mSystems.01006-20
Genome-Scale Mapping Reveals Complex Regulatory Activities of RpoN in Yersinia pseudotuberculosisCited by: 6
Author(s): A. K. M. Firoj Mahmud, K. Peter R. Nilsson, Anna Fahlgren, Roberto Navais, Rajdeep Choudhury, Kemal Avican, Maria Fällman
Software Mentions: 6
Published: about 5 years ago
10.1186/1471-2164-9-601
Combinatorial control of gene expression by the three yeast repressors Mig1, Mig2 and Mig3Cited by: 85
Author(s): Jakub Orzechowski Westholm, Niklas Nordberg, Eva Murén, Adam Ameur, Jan Komorowski, Hans Ronne
Software Mentions: 2
Published: over 17 years ago
10.3389/fpls.2016.01125
Comparative Transcriptional Profiling of Primed and Non-primed Rice Seedlings under Submergence StressCited by: 46
Author(s): Saddam Hussain, Hanqi Yin, Shaobing Peng, Faheem Ahmed Khan, Fahad Khan, Muhammad Sameeullah, Hafiz Athar Hussain, Jikun Huang, Kehui Cui, Lei Nie
Software Mentions: 1
Published: over 9 years ago
10.1186/gb-2009-10-11-r129
Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seqCited by: 64
Author(s): Mehdi Motallebipour, Adam Ameur, Madhu Sudhan Reddy Bysani, Kalicharan Patra, Ola Wallerman, Jonathan Mangion, Melissa Barker, Kevin McKernan, Jan Komorowski, Claes Wadelius
Software Mentions: 1
Published: about 17 years ago