10.1371/journal.pcbi.1009256

Computational identification and experimental characterization of preferred downstream positions in human core promoters
Cited by: 2
Author(s): René Dreos, Anna Sloutskin, Nati Malachi, Diana Ideses, Philipp Bücher, Tamar Juven‐Gershon
Software Mentions: 5
Published: almost 5 years ago

10.1371/journal.pone.0245444

The relationship between social support, stressful events, and menopause symptoms
Cited by: 20
Author(s): Megan Arnot, Emily H Emmott, Ruth Mace
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0067345

Impact of Geography and Climate on the Genetic Differentiation of the Subtropical Pine Pinus yunnanensis
Cited by: 37
Author(s): Baosheng Wang, Jian‐Feng Mao, Zhao Wang, Xiaoru Wang
Software Mentions: 5
Published: about 13 years ago

10.1371/journal.pntd.0007141

Association of rodent-borne Leptospira spp. with urban environments in Malaysian Borneo
Cited by: 39
Author(s): Kim R. Blasdell, Sergé Morand, David Perera, Cadhla Firth
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pntd.0003284

Improvements on Restricted Insecticide Application Protocol for Control of Human and Animal African Trypanosomiasis in Eastern Uganda
Cited by: 30
Author(s): Dennis Muhanguzi, Kim Picozzi, Jan Hatendorf, Michael Thrusfield, Susan C. Welburn, John David Kabasa, Charles Waiswa
Software Mentions: 5
Published: over 11 years ago

10.1371/journal.pone.0134817

Male Homosexual Preference: Where, When, Why?
Cited by: 9
Author(s): Julien Barthes, Pierre‐André Crochet, M. Raymond
Software Mentions: 5
Published: almost 11 years ago

10.1371/journal.pone.0171870

Phylogenetic patterns and the adaptive evolution of osmoregulation in fiddler crabs (Brachyura, Uca)
Cited by: 25
Author(s): Samuel Coelho Faria, Diogo B. Provete, Carl L. Thurman, John Campbell McNamara
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pone.0217839

The allometry of proboscis length in Melittidae (Hymenoptera: Apoidae) and an estimate of their foraging distance using museum collections
Cited by: 5
Author(s): Annalie Melin, Harald W. Krenn, Raurie C.K. Bowie, Colin M. Beale, John C. Manning, Jonathan F. Colville
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pntd.0008712

Vector competence and feeding-excretion behavior of Triatoma rubrovaria (Blanchard, 1843) (Hemiptera: Reduviidae) infected with Trypanosoma cruzi TcVI
Cited by: 10
Author(s): Thaiane Verly, Stephanie Costa, Nathanielly Rocha Casado de Lima, J Mallet, Francisco Odêncio, Mirian Cláudia de Souza Pereira, Carlos José de Carvalho Moreira, Constança Britto, Márcio G. Pavan
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0078392

Scale Effects between Body Size and Limb Design in Quadrupedal Mammals
Cited by: 55
Author(s): Brandon M. Kilbourne, Louwrens C. Hoffman
Software Mentions: 5
Published: over 12 years ago

10.1371/journal.pone.0010429

Novel Weapons Testing: Are Invasive Plants More Chemically Defended than Native Plants?
Cited by: 60
Author(s): Eric M. Lind, John D. Parker
Software Mentions: 5
Published: about 16 years ago

10.1371/journal.pone.0144147

The Independent Evolution Method Is Not a Viable Phylogenetic Comparative Method
Cited by: 3
Author(s): Rodger W. Griffin, Gabriel Yapuncich
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0198367

Comprehensive evolutionary analysis of the Anthroherpon radiation (Coleoptera, Leiodidae, Leptodirini)
Cited by: 10
Author(s): Iva Njunjić, A. Perrard, Kasper P. Hendriks, Menno Schilthuizen, Michel Perreau, Vincent Merckx, Michel Baylac, Louis Deharveng
Software Mentions: 5
Published: about 8 years ago

10.1371/journal.pone.0168441

Landscape Use and Co-Occurrence Patterns of Neotropical Spotted Cats
Cited by: 52
Author(s): Mariana B. Nagy‐Reis, James D. Nichols, Adriano Garcia Chiarello, Milton Cézar Ribeiro, Eleonore Zulnara Freire Setz
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pone.0094162

Geographic Variation of Melanisation Patterns in a Hornet Species: Genetic Differences, Climatic Pressures or Aposematic Constraints?
Cited by: 39
Author(s): A. Perrard, Marcella Arca, Quentin Rome, Franck Müller, Jiang-Li Tan, Sanjaya Bista, Hari Nugroho, Raymond Baudoin, Michel Baylac, Jean François Silvain, James M. Carpenter, Claire Villemant
Software Mentions: 5
Published: about 12 years ago

10.7717/peerj.6964

Coastal fish assemblages and predation pressure in northern-central Chilean <i>Lessonia trabeculata</i> kelp forests and barren grounds
Cited by: 10
Author(s): Nicolás Riquelme-Pérez, Catalina A. Musrri, Wolfgang Stotz, Osvaldo Cerda, Oscar Pino-Olivares, Martín Thiel
Software Mentions: 5
Published: about 7 years ago

10.1186/s13071-020-04221-z

Measuring mosquito control: adult-mosquito catches vs egg-trap data as endpoints of a cluster-randomized controlled trial of mosquito-disseminated pyriproxyfen
Cited by: 9
Author(s): Klauss Kleydmann Sabino Garcia, Hanid S. Versiani, Taís O. Araújo, João Paulo Araújo da Conceição, Marcos Takashi Obara, Walter Massa Ramalho, Thaís Tâmara Castro Minuzzi-Souza, Gustavo D. Gomes, Elisa Neves Vianna, Renata Velôzo Timbó, Vinicios G. C. Barbosa, Maridalva S. P. Rezende, Luciana P. F. Martins, Glauco O. Macedo, Bruno Lopes Carvalho, Israel Martins Moreira, Lorrainy A. Bartasson, Nadjar Nitz, Sérgio Luíz Bessa Luz, Rodrigo Gurgel-Gonçalves, Fernando Abad‐Franch
Software Mentions: 5
Published: almost 6 years ago

10.3390/ijms21051630

Alternatively Constructed Estrogen Receptor Alpha-Driven Super-Enhancers Result in Similar Gene Expression in Breast and Endometrial Cell Lines
Cited by: 1
Author(s): Dóra Bojcsuk, Gergely Nagy, Bálint László Bálint
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0244666

On genetic diversity in caraway: Genotyping of a large germplasm collection
Cited by: 2
Author(s): Daniel von Maydell, Heike Lehnert, Thomas Berner, Evelyn Klocke, Wolfram Junghanns, Jens Keilwagen, Frank Marthe
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0151075

Macro-Climatic Distribution Limits Show Both Niche Expansion and Niche Specialization among C4 Panicoids
Cited by: 8
Author(s): Lone Aagesen, Fernando Biganzoli, María Julia Bena, Ana C. Godoy-Bürki, Renata Reinheimer, Fernando O. Zuloaga
Software Mentions: 5
Published: over 10 years ago

10.3390/ijms20133315

Alu RNA Modulates the Expression of Cell Cycle Genes in Human Fibroblasts
Cited by: 10
Author(s): Simona Cantarella, Davide Carnevali, Marco Morselli, Anastasia Conti, Matteo Pellegrini, Barbara Montanini, Giorgio Dieci
Software Mentions: 5
Published: about 7 years ago

10.7554/eLife.46327

Identification of RBPMS as a mammalian smooth muscle master splicing regulator via proximity of its gene with super-enhancers
Cited by: 21
Author(s): Erick E Nakagaki-Silva, Clare Gooding, Miriam Llorian, Aishwarya G. Jacob, Fred Richards, Adrian Buckroyd, Sanjay Sinha, Christopher W.J. Smith
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0154871

Fruiting Season Length Restricts Global Distribution of Female-Only Parental Care in Frugivorous Passerine Birds
Cited by: 8
Author(s): Sahas Barve, Frank A. La Sorte
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pone.0239541

Genetic structure of a germplasm for hybrid breeding in rye (Secale cereale L.)
Cited by: 14
Author(s): Nikolaj Vendelbo, Pernille Sarup, Jihad Orabi, Peter Skov Kristensen, A. Jahoor
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0244803

Trypanosoma (Herpetosoma) diversity in rodents and lagomorphs of New Mexico with a focus on epizootological aspects of infection in Southern Plains woodrats (Neotoma micropus)
Cited by: 0
Author(s): Irina Goodrich, Clifton McKee, Michael Kosoy
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0148459

Assessment of Overlap of Phylogenetic Transmission Clusters and Communities in Simple Sexual Contact Networks: Applications to HIV-1
Cited by: 28
Author(s): Luc Villandré, David A. Stephens, Aurélie Labbe, Huldrych F. Günthard, Roger D. Kouyos, Tanja Stadler
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0127692

Revealing Beta-Diversity Patterns of Breeding Bird and Lizard Communities on Inundated Land-Bridge Islands by Separating the Turnover and Nestedness Components
Cited by: 71
Author(s): Xingfeng Si, Andrés Baselga, Ping Ding
Software Mentions: 5
Published: about 11 years ago

10.1371/journal.pone.0152067

MaxReport: An Enhanced Proteomic Result Reporting Tool for MaxQuant
Cited by: 13
Author(s): Tao Zhou, Chuyu Li, Wene Zhao, Xinru Wang, Fuqiang Wang, Jiahao Sha
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0113429

Body Size, Extinction Risk and Knowledge Bias in New World Snakes
Cited by: 14
Author(s): Bruno Vilela, Fabricio Villalobos, Miguel Á. Rodrı́guez, Levi Carina Terribile
Software Mentions: 5
Published: over 11 years ago

10.1007/s10530-017-1610-2

Environmental and ecological factors influencing the spillover of the non-native kelp, Undaria pinnatifida, from marinas into natural rocky reef communities
Cited by: 20
Author(s): Graham Epstein, Dan A. Smale
Software Mentions: 5
Published: over 8 years ago

10.7554/eLife.06942

NKX2-5 mutations causative for congenital heart disease retain functionality and are directed to hundreds of targets
Cited by: 52
Author(s): Romaric Bouveret, Ashley J. Waardenberg, Nicole Schönrock, Mirana Ramialison, Tram Doan, Daniëlle de Jong, Antoine Bondue, Gurpreet Kaur, Mohamed Salim, Hananeh Fonoudi, Chiann-mun Chen, Merridee A. Wouters, Shoumo Bhattacharya, Nicolas Plachta, Sally L. Dunwoodie, Gavin Chapman, Cédric Blanpain, Richard P. Harvey
Software Mentions: 5
Published: about 11 years ago

10.1186/s13059-020-01971-y

High-resolution modeling of the selection on local mRNA folding strength in coding sequences across the tree of life
Cited by: 22
Author(s): Michael Peeri, Tamir Tuller
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-020-72750-9

Cell type specific gene expression profiling reveals a role for complement component C3 in neutrophil responses to tissue damage
Cited by: 16
Author(s): Ruth A. Houseright, Emily E. Rosowski, Pui-ying Lam, Sébastien Tauzin, Oscar Mulvaney, Colin N. Dewey, Anna Huttenlocher
Software Mentions: 5
Published: almost 6 years ago

10.1093/gbe/evz246

Reprogramming of retrotransposon activity during speciation of the genus Citrus
Cited by: 2
Author(s): Carles Borredà, Estela Pérez-Román, Victoria Ibáñez, Javier Terol, Manuel Talón
Software Mentions: 5
Published: over 6 years ago

10.1016/j.meegid.2018.03.011

Clonal expansion across the seas as seen through CPLP-TB database: A joint effort in cataloguing Mycobacterium tuberculosis genetic diversity in Portuguese-speaking countries
Cited by: 16
Author(s): João Perdigão, Carla Silva, Jaciara Diniz, Catarina Pereira, Diana Machado, Jorge Ramos, Hugo Silva, Fernanda Abilleira, Clarice Brinck Brum, Ana Júlia Reis, Maíra Bidart de Macedo, João L. Scaini, Ana B. Silva, Lainister de Oliveira Esteves, Rita Macedo, Fernando Maltêz, Sofia Clemente, Elizabeth Coelho, Sofía Viegas, Paulo Rabna, Amabélia Rodrigues, Nuno Taveira, Luísa Jordão, Afrânio Lineu Kritski, José Roberto Lapa e Silva, Igor Mokrousov, David Couvin, Nalin Rastogi, Isabel Couto, Arnab Pain, Ruth McNerney, Taane G. Clark, Andréa von Groll, Elis R. Dalla-Costa, Maria Lúcia Rosa Rossetti, Pedro E. A. Silva, Miguel Viveiros, Isabel Portugal
Software Mentions: 5
Published: almost 7 years ago

10.1371/journal.pone.0231809

Genetic and demographic vulnerability of adder populations: Results of a genetic study in mainland Britain
Cited by: 3
Author(s): Sarah E. Ball, Nigel Hand, Faye Willman, Chris Durrant, Tobias Uller, Katja Claus, Joachim Mergeay, Dirk Bauwens, Trenton W. J. Garner
Software Mentions: 5
Published: about 6 years ago

10.3390/insects11060326

Evolutionary Patterns of Sex-Biased Genes in Three Species of Haplodiploid Insects
Cited by: 0
Author(s): Yujun Wang, Hua-Ling Wang, Xiaowei Wang, Shu‐Sheng Liu
Software Mentions: 5
Published: about 6 years ago

10.1111/jbi.12326

<i>Ficus insipida</i> subsp. <i>insipida</i> (Moraceae) reveals the role of ecology in the phylogeography of widespread Neotropical rain forest tree species
Cited by: 23
Author(s): Eurídice N. Honorio Coronado, Kyle G. Dexter, Monica F. Poelchau, Peter M. Hollingsworth, Oliver L. Phillips, R. Toby Pennington
Software Mentions: 5
Published: about 12 years ago

10.1098/rspb.2015.2840

Environmental drivers of crocodyliform extinction across the Jurassic/Cretaceous transition
Cited by: 40
Author(s): Jonathan Tennant, Philip D. Mannion, Paul Upchurch
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0119609

Behavioural Ecology and Group Cohesion of Juvenile Western Lowland Gorillas (Gorilla g. gorilla) during Rehabilitation in the Batéké Plateaux National Park, Gabon
Cited by: 8
Author(s): Guillaume Le Flohic, Peggy Motsch, Hélène M. De Nys, Simon Childs, Amos Courage, Tony King
Software Mentions: 5
Published: over 11 years ago

10.1098/rspb.2018.2387

The <i>achaete–scute</i> complex contains a single gene that controls bristle development in the semi-aquatic bugs
Cited by: 13
Author(s): Cédric Finet, Amélie Decaras, David Armisén, Abderrahman Khila
Software Mentions: 5
Published: over 7 years ago

10.1098/rsos.190939

Implications of kappa-casein evolutionary diversity for the self-assembly and aggregation of casein micelles
Cited by: 8
Author(s): Jean Manguy, Denis C. Shields
Software Mentions: 5
Published: almost 7 years ago

10.1371/journal.pone.0182270

Differential regulation of germ line apoptosis and germ cell differentiation by CPEB family members in C. elegans
Cited by: 4
Author(s): Kapil Dev Singh, Xue Zheng, Stuart Milstein, Martin Keller, Bernd Roschitzki, Jonas Grossmann, Michael O. Hengartner
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-018-29472-w

RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways
Cited by: 28
Author(s): Richard Ahn, Di Yan, Hsin-Wen Chang, Kristina Lee, Shrishti Bhattarai, Zhiming Huang, Mio Nakamura, Rasnik Singh, Ladan Afifi, Keyon Taravati, Priscila Muñoz-Sandoval, Mariela Pauli, Michael D. Rosenblum, Wilson Liao
Software Mentions: 5
Published: almost 8 years ago

10.1038/srep41393

Tree cover in Central Africa: determinants and sensitivity under contrasted scenarios of global change
Cited by: 11
Author(s): Julie C. Aleman, Olivier Blarquez, Sylvie Gourlet‐Fleury, Laurent Brémond, Charly Favier
Software Mentions: 5
Published: over 9 years ago

10.1172/jci.insight.142501

Surfactant protein C mutation links postnatal type 2 cell dysfunction to adult disease
Cited by: 10
Author(s): Sneha Sitaraman, Emily P. Martin, Cheng-Lun Na, Shuyang Zhao, Jenna Green, Hitesh Deshmukh, Anne‐Karina T. Perl, James P. Bridges, Yan Xu, Timothy E. Weaver
Software Mentions: 5
Published: almost 5 years ago

10.1038/s41598-018-28301-4

Parrots have evolved a primate-like telencephalic-midbrain-cerebellar circuit
Cited by: 43
Author(s): Cristian Gutiérrez-Ibáñez, Andrew N. Iwaniuk, Douglas R. Wylie
Software Mentions: 5
Published: about 8 years ago

10.1093/gbe/evu251

Diversity and Variability of NOD-Like Receptors in Fungi
Cited by: 77
Author(s): Witold Dyrka, Marina Lamacchia, Pascal Durrens, Boštjan Kobe, Asen Daskalov, Mathieu Paoletti, David James Sherman, Sven J. Saupe
Software Mentions: 5
Published: over 11 years ago

10.1038/s41598-018-36565-z

Terrestrial locomotion energy costs vary considerably between species: no evidence that this is explained by rate of leg force production or ecology
Cited by: 6
Author(s): Lewis G. Halsey, Craig R. White
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-44881-1

Accelerated diversifications in three diverse families of morphologically complex lichen-forming fungi link to major historical events
Cited by: 9
Author(s): Jen‐Pan Huang, Ekaphan Kraichak, Steven D. Leavitt, Matthew P. Nelsen, H. Thorsten Lumbsch
Software Mentions: 5
Published: about 7 years ago

10.3390/ijms20010059

We Are What We Eat: A Stoichiometric and Ecometabolomic Study of Caterpillars Feeding on Two Pine Subspecies of Pinus sylvestris
Cited by: 8
Author(s): Albert Rivas‐Ubach, Josep Peñuelas, José A. Hódar, Michal Oravec, Ljiljana Paša‐Tolić, Otmar Urban, Jordi Sardans
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-55894-1

Behavioral evolution contributes to hindbrain diversification among Lake Malawi cichlid fish
Cited by: 9
Author(s): Ryan A. York, Alexandra E. Byrne, Kawther Abdilleh, Chinar Patil, Todd Streelman, Thomas E. Finger, Russell D. Fernald
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-020-62782-6

Exploring the configuration spaces of surface materials using time-dependent diffraction patterns and unsupervised learning
Cited by: 4
Author(s): Daniel M. Packwood
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0196987

Diversity and potential activity patterns of planktonic eukaryotic microbes in a mesoeutrophic coastal area (eastern English Channel)
Cited by: 11
Author(s): Sara Rachik, Urania Christaki, Luen Luen Li, Savvas Genitsaris, Elsa Breton, Sébastien Monchy
Software Mentions: 5
Published: about 8 years ago

10.3390/ijms18081654

A Different Microbiome Gene Repertoire in the Airways of Cystic Fibrosis Patients with Severe Lung Disease
Cited by: 35
Author(s): Giovanni Bacci, Alessio Mengoni, Ersilia Fiscarelli, Nicola Segata, Giovanni Taccetti, Daniela Dolce, Patrizia Paganin, Patrizia Morelli, Vanessa Tuccio Guarna Assanti, A. De Alessandri, Vincenzina Lucidi, Annamaria Bevivino
Software Mentions: 5
Published: almost 9 years ago

10.1186/s12890-020-01202-x

Data driven decision making to characterize clinical personas of parents of children with cystic fibrosis: a mixed methods study
Cited by: 1
Author(s): Rhonda Szczesniak, Teresa Pestian, Leo L. Duan, Dan Li, Sophia Stamper, Brycen Ferrara, Elizabeth L. Kramer, John Clancy, Daniel H. Grossoehme
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-019-47247-9

Travel linearity and speed of human foragers and chimpanzees during their daily search for food in tropical rainforests
Cited by: 35
Author(s): Haneul Jang, Christophe Boesch, Roger Mundry, Simone D. Ban, Karline R. L. Janmaat
Software Mentions: 5
Published: almost 7 years ago

10.3390/ijerph17249566

In the Subtropical Monsoon Climate High-Density City, What Features of the Neighborhood Environment Matter Most for Public Health?
Cited by: 5
Author(s): 偉俊 高, Ruoxiang Tu, Hao Li, Yongli Fang, Qingmin Que
Software Mentions: 5
Published: over 5 years ago

10.1038/s41598-019-57198-w

Monitoring canid scent marking in space and time using a biologging and machine learning approach
Cited by: 8
Author(s): Owen R. Bidder, Agustina di Virgilio, J. F. Hunter, Alex McInturff, Kaitlyn M. Gaynor, Alison M. Smith, Janelle Dorcy, Frank Rosell
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0250890

Influenza forecasting for French regions combining EHR, web and climatic data sources with a machine learning ensemble approach
Cited by: 4
Author(s): Canelle Poirier, Yulin Hswen, Guillaume Bouzillé, Marc Cuggia, Audrey Lavenu, John S. Brownstein, Thomas G. Brewer, Mauricio Santillana
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-020-63005-8

Effects of a low-head weir on multi-scaled movement and behavior of three riverine fish species
Cited by: 17
Author(s): Luke Carpenter‐Bundhoo, Gavin L. Butler, Nick Bond, Stuart Bunn, Ivars Reinfelds, Mark J. Kennard
Software Mentions: 5
Published: about 6 years ago

10.3390/molecules26154588

Humic Acid Improves Zn Fertilization in Oxisols Successively Cultivated with Maize–Brachiaria
Cited by: 4
Author(s): Everton Geraldo de Morais, Carlos Alberto Silva, Keiji Jindo
Software Mentions: 5
Published: almost 5 years ago

10.3390/vaccines9070777

COVID-19 Vaccination Acceptance and Hesitancy among Healthcare Workers in Germany
Cited by: 68
Author(s): Christopher Holzmann‐Littig, Matthias C. Braunisch, Peter Kranke, Maria Popp, Christian Seeber, Falk Fichtner, Bianca Littig, Javier Carbajo-Lozoya, Christine Allwang, Tamara Frank, Joerg J Meerpohl, Bernhard Haller, Christoph Schmaderer
Software Mentions: 5
Published: almost 5 years ago

10.3390/nu12010055

Dietary Intakes and Cardiovascular Health of Healthy Adults in Short-, Medium-, and Long-Term Whole-Food Plant-Based Lifestyle Program
Cited by: 20
Author(s): Boštjan Jakše, Barbara Jakše, Stanislav Pinter, Borut Jug, Uroš Godnov, Jernej Pajek, Nataša Fidler Mis
Software Mentions: 5
Published: over 6 years ago

10.1002/ajpa.24293

Exploring directional and fluctuating asymmetry in the human palate during growth
Cited by: 8
Author(s): Gregorio Oxilia, Jessica C. Menghi Sartorio, Eugenio Bortolini, Giulia Zampirolo, Andrea Papini, Marco Boggioni, Sergio Martini, Filippo Marciani, Simona Arrighi, Carla Figus, Giulia Marciani, Matteo Romandini, Sara Silvestrini, Maria Elena Pedrosi, Tommaso Mori, Alessandro Riga, Ottmar Kullmer, Rachel Sarig, Luca Fiorenza, Melchiore Giganti, Rita Sorrentino, Maria Giovanna Belcastro, Jacopo Moggi‐Cecchi, Stefano Benazzi
Software Mentions: 5
Published: about 5 years ago

10.3390/microorganisms9071470

Changes in Soil Microbial Communities across an Urbanization Gradient: A Local-Scale Temporal Study in the Arid Southwestern USA
Cited by: 7
Author(s): Yongjian Chen, Adalee Martinez, Sydney Cleavenger, Julia Rudolph, Albert Barberán
Software Mentions: 5
Published: about 5 years ago

10.3389/fcell.2020.00552

Id Proteins Promote a Cancer Stem Cell Phenotype in Mouse Models of Triple Negative Breast Cancer via Negative Regulation of Robo1
Cited by: 15
Author(s): Wee Siang Teo, Holly Holliday, N. Karthikeyan, Aurélie Cazet, Daniel Roden, Kate Harvey, Christina Valbirk Konrad, Reshma Murali, Binitha Anu Varghese, Archana P. Thankamony, Chia-Ling Chan, Andrea McFarland, Simon Junankar, Sunny Ye, Jessica Yang, Iva Nikolić, Jaynish S. Shah, Laura A. Baker, Ewan K.A. Millar, Matthew J. Naylor, Christopher J. Ormandy, Sunil R. Lakhani, Warren Kaplan, Albert S. Mellick, Sandra A. O’Toole, Alexander Swarbrick, Radhika Nair
Software Mentions: 5
Published: almost 6 years ago

10.3390/md18120653

Extraction Improvement of the Bioactive Blue-Green Pigment “Marennine” from Diatom Haslea ostrearia’s Blue Water: A Solid-Phase Method Based on Graphitic Matrices
Cited by: 5
Author(s): William Bélanger, Alexandre A. Arnold, François Turcotte, Richard Saint-Louis, Jean-Daniel Deschênes, Bertrand Génard, Isabelle Marcotte, Réjean Tremblay
Software Mentions: 5
Published: over 5 years ago

10.2196/27633

Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation
Cited by: 716
Author(s): András Lánczky, Balázs Győrffy
Software Mentions: 5
Published: almost 5 years ago

10.3390/ijms21197288

Pathway Analysis of Selected Circulating miRNAs in Plasma of Breast Cancer Patients: A Preliminary Study
Cited by: 13
Author(s): Veronika Holubeková, Zuzana Kolková, Marián Grendár, Dušan Braný, Dana Dvorská, Igor Stastny, Marianna Jagelková, Katarína Zelinová, Marek Samec, Alena Líšková, Zuzana Laučeková, Erik Kúdela, Martina Bobrovská, Michal Kalman, Pavol Žúbor, Zuzana Daňková
Software Mentions: 5
Published: almost 6 years ago

10.1186/s13046-020-01823-4

The EGFR-HSF1 axis accelerates the tumorigenesis of pancreatic cancer
Cited by: 9
Author(s): Weikun Qian, Ke Chen, Tao Qin, Ying Xiao, Jie Li, Yangyang Yue, Cancan Zhou, Jiguang Ma, Wanxing Duan, Jing Liu, Liang Han, Li Li, Xin Shen, Zheng Wu, Qingyong Ma, Zheng Wang
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0130847

Latitudinal Gradient in Otolith Shape among Local Populations of Atlantic Herring (Clupea harengus L.) in Norway
Cited by: 27
Author(s): Lísa Anne Libungan, Aril Slotte, Åse Husebø, Jane Aanestad Godiksen, Snæbjörn Pálsson
Software Mentions: 5
Published: about 11 years ago

10.1186/1741-7007-8-26

Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila
Cited by: 22
Author(s): Carlo G. Artieri, Rama S. Singh
Software Mentions: 5
Published: over 16 years ago

10.1186/1471-2229-13-136

Integration of promoters, inverted repeat sequences and proteomic data into a model for high silencing efficiency of coeliac disease related gliadins in bread wheat
Cited by: 23
Author(s): Fernando Pistón, Javier Gil-Humanes, Francisco Barro
Software Mentions: 5
Published: over 13 years ago

10.3389/fncel.2018.00106

Automated Morphological Analysis of Microglia After Stroke
Cited by: 155
Author(s): Steffanie Heindl, Benno Gesierich, Corinne Benakis, Gemma Llovera, Marco Duering, Arthur Liesz
Software Mentions: 5
Published: about 8 years ago

10.3390/diagnostics11030476

Association of Circulating miRNA Expression with Preeclampsia, Its Onset, and Severity
Cited by: 8
Author(s): Zuzana Kolková, Veronika Holubeková, Marián Grendár, Marcela Ňachajová, Pavol Žúbor, Terézia Pribulová, Dušan Loderer, Imrich Zigo, Kamil Biringer, Andrea Horňáková
Software Mentions: 5
Published: over 5 years ago

10.1038/s42003-021-01656-7

Molecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors
Cited by: 19
Author(s): Kelsey Yetsko, Jessica Farrell, Nicholas B. Blackburn, Liam Whitmore, Maximilian R Stammnitz, Jenny Whilde, Catherine B. Eastman, Devon Rollinson Ramia, Rachel Thomas, Aleksandar Krstić, Paul J. Linser, Simon Creer, Gary R. Carvalho, Mariana A. Devlin, Nina Nahvi, Ana C Leandro, Thomas W. deMaar, Brooke Burkhalter, Elizabeth P. Murchison, Christine E. Schnitzler, David J. Duffy
Software Mentions: 5
Published: over 5 years ago

10.7717/peerj.3745

Relying on known or exploring for new? Movement patterns and reproductive resource use in a tadpole-transporting frog
Cited by: 24
Author(s): Kristina Barbara Beck, Matthias‐Claudio Loretto, Max Ringler, Walter Hödl, Andrius Pašukonis
Software Mentions: 5
Published: almost 9 years ago

10.1186/s12870-019-1714-1

A combination of approaches evidenced seed storage behaviour in the miracle berry Synsepalum dulcificum (Schumach. et Thonn.) Daniell
Cited by: 6
Author(s): Dèdéou Apocalypse Tchokponhoué, Sognigbé N’Danikou, Enoch G. Achigan‐Dako
Software Mentions: 5
Published: over 7 years ago

10.1186/s12864-016-2429-4

Genome-wide association mapping of partial resistance to Aphanomyces euteiches in pea
Cited by: 64
Author(s): Aurore Desgroux, Virginie Merot l'Anthoene, Martine Roux-Duparque, Jean-Philippe Rivière, Grégoire Aubert, Nadim Tayeh, Anne Moussart, P Mangin, Pierrick Vetel, Christophe Piriou, Rebecca J. McGee, Clarice J. Coyne, Judith Burstin, Alain Baranger, Maria Manzanares-Dauleux, Virginie Bourion, Marie‐Laure Pilet‐Nayel
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0243265

Genomic variation and epidemiology of SARS-CoV-2 importation and early circulation in Israel
Cited by: 4
Author(s): Neta S. Zuckerman, Efrat Bucris, Yaron Drori, Oran Erster, Danit Sofer, Rakefet Pando, Ella Mendelson, Orna Mor, Michal Mandelboim
Software Mentions: 5
Published: over 5 years ago

10.1186/1752-0509-8-56

Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling
Cited by: 0
Author(s): Rosario M. Piro, Stefan Wiesberg, Gunnar Schramm, Nico Rebel, Marcus Oswald, Roland Eils, Gerhard Reinelt, Rainer König
Software Mentions: 5
Published: about 12 years ago

10.1186/1471-2407-14-994

The association between Histone 3 Lysine 27 Trimethylation (H3K27me3) and prostate cancer: relationship with clinicopathological parameters
Cited by: 43
Author(s): Marjolaine Ngollo, André Lebert, Aslihan Dagdemir, Gaëlle Judes, Seher Karslı-Çeppioğlu, Marine Daures, Jean‐Louis Kemeny, Frédérique Penault‐Llorca, Jean‐Paul Boiteux, Yves‐Jean Bignon, Laurent Guy, Dominique Bernard‐Gallon
Software Mentions: 5
Published: over 11 years ago

10.1371/journal.pone.0236586

Transcriptome analysis of contrasting resistance to herbivory by Empoasca fabae in two shrub willow species and their hybrid progeny
Cited by: 5
Author(s): Wanyan Wang, Craig H. Carlson, Lawrence B. Smart, John E. Carlson
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-020-58528-z

Breeding Brown Pelicans Improve Foraging Performance as Energetic Needs Rise
Cited by: 13
Author(s): Brock Geary, Paul L. Leberg, Kevin M. Purcell, Scott T. Walter, Jordan Karubian
Software Mentions: 5
Published: over 6 years ago

10.3389/fpls.2018.01698

Geography and Environment Shape Landscape Genetics of Mediterranean Alpine Species Silene ciliata Poiret. (Caryophyllaceae)
Cited by: 15
Author(s): Javier Morente‐López, Cristina García, Carlos Lara‐Romero, Alfredo García‐Fernández, David Draper, J. M. Iriondo
Software Mentions: 5
Published: over 7 years ago

10.1111/febs.15292

Fibroblast‐specific genome‐scale modelling predicts an imbalance in amino acid metabolism in Refsum disease
Cited by: 4
Author(s): Agnieszka B. Wegrzyn, Katharina Herzog, Albert Gerding, Marcel Kwiatkowski, Justina C. Wolters, Amalia M. Dolga, A. E. M. van Lint, Ronald J. A. Wanders, Hans R. Waterham, Barbara M. Bakker
Software Mentions: 5
Published: over 6 years ago

10.3389/fnins.2013.00055

Optimized Design and Analysis of Sparse-Sampling fMRI Experiments
Cited by: 65
Author(s): Tyler K. Perrachione, Samik Ghosh
Software Mentions: 5
Published: over 13 years ago

10.3389/fgene.2021.693541

The Evolutionary Patterns of Genome Size in Ensifera (Insecta: Orthoptera)
Cited by: 15
Author(s): Hao Yuan, Yuan Huang, Ying Mao, Nan Zhang, Yimeng Nie, Xue Zhang, Yafu Zhou, Shao-Li Mao
Software Mentions: 5
Published: about 5 years ago

10.3389/fmicb.2020.596589

The Transition From Stochastic to Deterministic Bacterial Community Assembly During Permafrost Thaw Succession
Cited by: 24
Author(s): Stacey J. Doherty, Robyn A. Barbato, A. Stuart Grandy, W. Kelley Thomas, Sylvain Monteux, Ellen Dorrepaal, Margareta Johansson, Jessica G. Ernakovich
Software Mentions: 5
Published: over 5 years ago

10.1111/ele.13082

Linking phytoplankton community metabolism to the individual size distribution
Cited by: 20
Author(s): Daniel Padfield, Angus Buckling, Ruth Warfield, Chris D. Lowe, Gabriel Yvon‐Durocher
Software Mentions: 5
Published: about 8 years ago

10.1186/s13059-021-02474-0

Gramtools enables multiscale variation analysis with genome graphs
Cited by: 13
Author(s): Brice Letcher, Martin Hunt, Zamin Iqbal
Software Mentions: 5
Published: almost 5 years ago

10.1002/eap.2019

Disturbance regulates the density–body‐mass relationship of soil fauna
Cited by: 1
Author(s): Frank van Langevelde, Vincent Comor, S. de Bie, Herbert H. T. Prins, Madhav P. Thakur
Software Mentions: 5
Published: over 6 years ago

10.3389/fpls.2021.620786

On-Farm Trials Reveal Significant but Uncertain Control of Botrytis cinerea by Aureobasidium pullulans and Potassium Bicarbonate in Organic Grapevines
Cited by: 8
Author(s): Anabelle Laurent, David Makowski, Nicolas Aveline, Sévérine Dupin, Fernando E. Miguez
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0168717

Environmental Predictors of Seabird Wrecks in a Tropical Coastal Area
Cited by: 26
Author(s): Davi Castro Tavares, Jailson Fulgêncio de Moura, Salvatore Siciliano
Software Mentions: 5
Published: over 9 years ago

10.1242/jeb.242158

Effects of early-life conditions on innate immune function in adult zebra finches
Cited by: 2
Author(s): Merijn M. G. Driessen, Maaike A. Versteegh, Yoran H. Gerritsma, B. Irene Tieleman, Ido Pen, Simon Verhulst
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pcbi.1006646

Epithelial stratification shapes infection dynamics
Cited by: 11
Author(s): Carmen Lía Murall, Robert Jackson, Ingeborg Zehbe, Nathalie Boulle, Michel Segondy, Samuel Alizon
Software Mentions: 5
Published: over 7 years ago

10.3389/fcell.2020.608044

Loss of G-Protein Pathway Suppressor 2 Promotes Tumor Growth Through Activation of AKT Signaling
Cited by: 10
Author(s): Stefanie Chan, Emma Smith, Yuan Gao, Julian Kwan, Benjamin Blum, Andrew Tilston-Lünel, Isabella Turcinovic, Xaralabos Varelas, Maria Dafne Cardamone, Stefano Monti, Andrew Emili, Valentina Perissi
Software Mentions: 5
Published: over 5 years ago

10.1093/gigascience/giab065

SimFFPE and FilterFFPE: improving structural variant calling in FFPE samples
Cited by: 4
Author(s): Lanying Wei, Martin Dugas, Sarah Sandmann
Software Mentions: 5
Published: almost 5 years ago

10.3390/v13020291

Metatranscriptome Analysis of Sympatric Bee Species Identifies Bee Virus Variants and a New Virus, Andrena-Associated Bee Virus-1
Cited by: 12
Author(s): Katie F. Daughenbaugh, Idan Kahnonitch, Charles C. Carey, Alexander J. McMenamin, Tanner Wiegand, Tal Erez, Naama Arkin, Brian T. Ross, Blake Wiedenheft, Asaf Sadeh, Nor Chejanovsky, Yael Mandelik, Michelle L. Flenniken
Software Mentions: 5
Published: over 5 years ago