Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-017-3817-0

https://doi.org/10.1186/s12864-017-3817-0

lncRNA-screen: an interactive platform for computationally screening long non-coding RNAs in large genomics datasets

Cited by: 22
Author(s): Yixiao Gong, Hsin‐Chun Huang, Yu Liang, Thomas Trimarchi, Iannis Aifantis, Aristotelis Tsirigos
Published: over 7 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: CPAT
Change Point Analysis Tests
Papers that mentioned: 299
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: CPAT
CPAT (Coding Potential Assessment Tool)
Papers that mentioned: 299
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203