10.3389/fimmu.2020.00594

Expansion of Neutrophils and Classical and Nonclassical Monocytes as a Hallmark in Relapsing-Remitting Multiple Sclerosis
Cited by: 23
Author(s): David Haschka, Piotr Tymoszuk, Gabriel Bsteh, Verena Petzer, Klaus Berek, Igor Theurl, Thomas Berger, Günter Weiß
Software Mentions: 4
Published: over 6 years ago

10.1093/sleep/zsab035

Sleep health and cognitive function among people with and without HIV: the use of different machine learning approaches
Cited by: 10
Author(s): Davide De Francesco, Caroline Sabin, Alan Winston, Michael Rueschman, Nicki Doyle, Jane Anderson, Jaime H. Vera, Marta Boffito, Memory Sachikonye, Patrick Mallon, Lewis Haddow, Frank A. Post, Susan Redline, Ken M. Kunisaki
Software Mentions: 4
Published: over 5 years ago

10.1186/1756-0500-5-85

Mathematical modeling and comparison of protein size distribution in different plant, animal, fungal and microbial species reveals a negative correlation between protein size and protein number, thus providing insight into the evolution of proteomes
Cited by: 84
Author(s): Axel Tiessen, Paulino Pérez‐Rodríguez, Luis Delaye
Software Mentions: 4
Published: over 14 years ago

10.1186/1472-6807-7-15

Scoring predictive models using a reduced representation of proteins: model and energy definition
Cited by: 26
Author(s): Federico Fogolari, L. Pieri, Agostino Dovier, Luca Bortolussi, G. Giugliarelli, Alessandra Corazza, Gennaro Esposito, Paolo Viglino
Software Mentions: 4
Published: over 19 years ago

10.1007/s13592-020-00758-1

Urbanisation is associated with reduced Nosema sp. infection, higher colony strength and higher richness of foraged pollen in honeybees
Cited by: 14
Author(s): Ash E. Samuelson, Richard J. Gill, Ellouise Leadbeater
Software Mentions: 4
Published: over 6 years ago

10.1038/celldisc.2015.45

Mapping gene regulatory circuitry of Pax6 during neurogenesis
Cited by: 56
Author(s): Sudhir Thakurela, Neha Tiwari, Sandra Schick, Angela Garding, Robert Ivánek, Benedikt Berninger, Vijay Tiwari
Software Mentions: 4
Published: over 10 years ago

10.3389/fgene.2019.01035

Population Genomics of the Neotropical Brown Stink Bug, Euschistus heros: The Most Important Emerging Insect Pest to Soybean in Brazil
Cited by: 15
Author(s): Maria Imaculada Zucchi, Erick M. G. Cordeiro, Weijie Xing, Letícia Marise Lamana, Patrick J. Brown, Shilpa Manjunatha, João Paulo Gomes Viana, Celso Omoto, José Baldin Pinheiro, Steven J. Clough
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0130622

DELTA: A Distal Enhancer Locating Tool Based on AdaBoost Algorithm and Shape Features of Chromatin Modifications
Cited by: 54
Author(s): Yiming Lu, Wubin Qu, Guangyu Shan, Chenggang Zhang
Software Mentions: 4
Published: about 11 years ago

10.7717/peerj.11772

Shape familiarity modulates preference for curvature in drawings of common-use objects
Cited by: 4
Author(s): Erick G. Chuquichambi, Letizia Palumbo, Carlos Rey, Enric Munar
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0231142

Sex-based differences in movement and space use of the blacktip reef shark, Carcharhinus melanopterus
Cited by: 4
Author(s): Audrey M. Schlaff, Michelle R. Heupel, Vinay Udyawer, Colin A. Simpfendorfer
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2016.00703

Unearthing the Ecology of Soil Microorganisms Using a High Resolution DNA-SIP Approach to Explore Cellulose and Xylose Metabolism in Soil
Cited by: 122
Author(s): Charles Pepe-Ranney, Ashley Campbell, Chantal Koechli, Sean T. Berthrong, Daniel H. Buckley
Software Mentions: 4
Published: about 10 years ago

10.1371/journal.pone.0222272

Mortality, perception, and scale: Understanding how predation shapes space use in a wild prey population
Cited by: 6
Author(s): Lindsey N. Messinger, Erica F. Stuber, Christopher J. Chizinski, Joseph J. Fontaine
Software Mentions: 4
Published: almost 7 years ago

10.1002/ece3.7005

Plant phylogeny drives arboreal caterpillar assemblages across the Holarctic
Cited by: 8
Author(s): Carlo L. Seifert, Martin Volf, Leonardo Ré Jorge, Tomokazu Abe, Grace Carscallen, Pavel Drozd, Rajesh Kumar, Greg P. A. Lamarre, Martin Libra, María Eugenia Losada, Scott E. Miller, Masashi Murakami, Geoffrey Nichols, Petr Pyszko, Martin Šigut, David L. Wagner, Vojtěch Novotný
Software Mentions: 4
Published: almost 6 years ago

10.1002/ece3.3564

Phylogenetic turnover during subtropical forest succession across environmental and phylogenetic scales
Cited by: 22
Author(s): Oliver Purschke, Stefan G. Michalski, Helge Bruelheide, Walter Durka
Software Mentions: 4
Published: over 8 years ago

10.1093/conphys/coaa086

Under cover of the night: context-dependency of anthropogenic disturbance on stress levels of wild roe deer Capreolus capreolus
Cited by: 15
Author(s): Jeffrey Carbillet, Benjamin Rey, Rupert Palme, Nicolas Morellet, Nadège C. Bonnot, Yannick Chaval, Bruno Cargnelutti, A. J. Mark Hewison, Emmanuelle Gilot‐Fromont, Hélène Verheyden
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.3827

Characterizing habitat suitability for a central‐place forager in a dynamic marine environment
Cited by: 20
Author(s): Dana K. Briscoe, Sabrina Fossette, Kylie L. Scales, Elliott L. Hazen, Steven J. Bograd, Sara M. Maxwell, Elizabeth A. McHuron, Patrick W. Robinson, Carey E. Kuhn, Daniel P. Costa, Larry B. Crowder, Rebecca L. Lewison
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0206317

Proteomic analysis of Lactobacillus casei GCRL163 cell-free extracts reveals a SecB homolog and other biomarkers of prolonged heat stress
Cited by: 11
Author(s): Kayode T. Adu, Richard Wilson, David S. Nichols, Anthony L. Baker, John P. Bowman, ML Britz
Software Mentions: 4
Published: almost 8 years ago

10.1002/ece3.6608

Are fission–fusion dynamics consistent among populations? A large‐scale study with Cape buffalo
Cited by: 6
Author(s): Elodie Wielgus, Daniel Cornélis, Michel De Garine‐Wichatitsky, Bradley Cain, Hervé Fritz, Eve Miguel, Hugo Valls‐Fox, Alexandre Caron, Simon Chamaillé‐Jammes
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-018-37309-9

HRGPred: Prediction of herbicide resistant genes with k-mer nucleotide compositional features and support vector machine
Cited by: 8
Author(s): Prabina Kumar Meher, Tanmaya Kumar Sahu, K. Raghunandan, Shachi Gahoi, Nalini Kanta Choudhury, Atmakuri Ramakrishna Rao
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.7398

Fine‐scale foraging behavior reveals differences in the functional roles of herbivorous reef fishes
Cited by: 8
Author(s): Robert F. Semmler, Simon J. Brandl, Sally A. Keith, David R. Bellwood
Software Mentions: 4
Published: over 5 years ago

10.3390/v10100576

Gene Gangs of the Chloroviruses: Conserved Clusters of Collinear Monocistronic Genes
Cited by: 10
Author(s): Phillip Seitzer, Adrien Jeanniard, Fangrui Ma, James L. Van Etten, Marc T. Facciotti, David D. Dunigan
Software Mentions: 4
Published: almost 8 years ago

10.1186/s12864-016-2738-7

Structural and functional analysis of the finished genome of the recently isolated toxic Anabaena sp. WA102
Cited by: 22
Author(s): Nathan Brown, Robert F. Mueller, Jonathan W. Shepardson, Zachary C. Landry, Jeff Morré, Christoph Maier, F. Joan Hardy, Theo W. Dreher
Software Mentions: 4
Published: about 10 years ago

10.1007/s10329-021-00927-5

Home range size in central chimpanzees (Pan troglodytes troglodytes) from Loango National Park, Gabon
Cited by: 4
Author(s): Laura Martínez-Íñigo, Pauline Baas, Harmonie Klein, Simone Pika, Tobias Deschner
Software Mentions: 4
Published: about 5 years ago

10.1186/s12859-019-3020-1

LSX: automated reduction of gene-specific lineage evolutionary rate heterogeneity for multi-gene phylogeny inference
Cited by: 3
Author(s): Carlos Rivera-Rivera, Juan I. Montoya‐Burgos
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41598-019-48853-3

Hunters select for behavioral traits in a large carnivore
Cited by: 16
Author(s): Martin Leclerc, Andreas Zedrosser, Jon E. Swenson, Fanie Pelletier
Software Mentions: 4
Published: almost 7 years ago

10.1098/rsos.200577

Group dominance increases territory size and reduces neighbour pressure in wild chimpanzees
Cited by: 19
Author(s): Sylvain Lemoine, Christophe Boesch, Anna Preis, Liran Samuni, Catherine Crockford, Roman M. Wittig
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-017-15482-7

Influence of Precipitation and Crop Germination on Resource Selection by Mule Deer (Odocoileus hemionus) in Southwest Colorado
Cited by: 1
Author(s): Emily Megan Carrollo, Heather E. Johnson, Justin W. Fischer, Matthew P. Hammond, Patricia D. Dorsey, Charles W. Anderson, Kurt C. VerCauteren, W. David Walter
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-019-49879-3

Subsidies from anthropogenic resources alter diet, activity, and ranging behavior of an apex predator (Canis lupus)
Cited by: 14
Author(s): Tyler R. Petroelje, Jerrold L. Belant, Dean E. Beyer, Nathan J. Svoboda
Software Mentions: 4
Published: almost 7 years ago

10.3389/frobt.2019.00053

Sentiment Analysis for Words and Fiction Characters From the Perspective of Computational (Neuro-)Poetics
Cited by: 29
Author(s): Arthur Jacobs
Software Mentions: 4
Published: about 7 years ago

10.7717/peerj.9380

Multi-predator assemblages, dive type, bathymetry and sex influence foraging success and efficiency in African penguins
Cited by: 17
Author(s): Grace J. Sutton, Lorien Pichegru, Julia Botha, Abbas Z. Kouzani, Scott Adams, Charles A. Bost, John P. Y. Arnould
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0235263

Visualisation tools for dependent peptide searches to support the exploration of in vitro protein modifications
Cited by: 2
Author(s): George W. Preston, Liping Yang, David H. Phillips, Claudia S. Maier
Software Mentions: 4
Published: about 6 years ago

10.1007/s00442-020-04754-1

Seasonal and daily shifts in behavior and resource selection: how a carnivore navigates costly landscapes
Cited by: 16
Author(s): E. Hance Ellington, Erich M. Muntz, Stanley D. Gehrt
Software Mentions: 4
Published: almost 6 years ago

10.1007/s00227-016-2922-y

Changes in behaviour drive inter-annual variability in the at-sea distribution of northern gannets
Cited by: 18
Author(s): Victoria Warwick-Evans, Philip W. Atkinson, John P. Y. Arnould, Roland D Gauvain, Louise Soanes, Leonie A. Robinson, Jonathan A. Green
Software Mentions: 4
Published: about 10 years ago

10.1371/journal.pone.0228108

Community-intrinsic properties enhance keratin degradation from bacterial consortia
Cited by: 15
Author(s): Poonam Nasipuri, Jakob Herschend, Asker Brejnrod, Jonas Stenløkke Madsen, Roall Espersen, Birte Svensson, Mette Burmølle, Samuel Jacquiod, Søren J. Sørensen
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pntd.0006351

Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2)
Cited by: 9
Author(s): Gilberto Santos de Oliveira, Rebeca Kawahara, Lívia Rosa-Fernandes, Simon Ngao Mule, Carla Cristi Avila, Marta Maria Geraldes Teixeira, Martin R. Larsen, Giuseppe Palmisano
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pgen.1008551

Aspergillus fumigatus calcium-responsive transcription factors regulate cell wall architecture promoting stress tolerance, virulence and caspofungin resistance
Cited by: 32
Author(s): Patrícia Alves de Castro, Ana Cristina Colabardini, Adriana Oliveira Manfiolli, Jéssica Chiaratto, Lilian Pereira Silva, Eliciane Cevolani Mattos, Giuseppe Palmisano, Fausto Almeida, Gabriela Félix Persinoti, Laure Nicolas Annick Ries, Laura Mellado, Marina Campos Rocha, Michael Bromley, Roberto Nascimento Silva, Gabriel Scalini de Souza, Flávio Vieira Loures, Iran Malavazi, Neil Andrew Brown, Gustavo H. Goldman
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-018-22236-6

Support for viral persistence in bats from age-specific serology and models of maternal immunity
Cited by: 35
Author(s): Alison J. Peel, Kate S. Baker, David T. S. Hayman, Christopher C. Broder, Andrew A. Cunningham, Anthony R. Fooks, Romain Garnier, James Wood, Olivier Restif
Software Mentions: 4
Published: over 8 years ago

10.1074/mcp.RA117.000189

Spatial Tissue Proteomics Quantifies Inter- and Intratumor Heterogeneity in Hepatocellular Carcinoma (HCC)
Cited by: 63
Author(s): Katarzyna Buczak, Alessandro Ori, Joanna Kirkpatrick, Kerstin Hölzer, Daniel Dauch, Stephanie Roessler, Volker Endris, Felix Lasitschka, Luca Parca, Alexander Schmidt, Lars Zender, Peter Schirmacher, Jeroen Krijgsveld, Stephan Singer, Martin Beck
Software Mentions: 4
Published: over 8 years ago

10.1016/j.molcel.2021.06.016

Targeted protein degradation reveals a direct role of SPT6 in RNAPII elongation and termination
Cited by: 31
Author(s): Ashwin Narain, Pranjali Bhandare, Bikash Adhikari, Simone Backes, Martin Eilers, Lars Dölken, Andreas Schlösser, Florian Erhard, Apoorva Baluapuri, Elmar Wolf
Software Mentions: 4
Published: about 5 years ago

10.1186/s13068-016-0608-9

Time-scale dynamics of proteome and transcriptome of the white-rot fungus Phlebia radiata: growth on spruce wood and decay effect on lignocellulose
Cited by: 91
Author(s): Jaana Kuuskeri, Mari Häkkinen, Pia Laine, Olli‐Pekka Smolander, Fitsum Tamene, Sini Miettinen, Paula Nousiainen, Marianna Kemell, Petri Auvinen, Taina Lundell
Software Mentions: 4
Published: almost 10 years ago

10.1186/s12942-020-00234-0

Multivariate Bayesian meta-analysis: joint modelling of multiple cancer types using summary statistics
Cited by: 2
Author(s): Farzana Jahan, Earl Duncan, Susanna Cramb, Peter D. Baade, Kerrie Mengersen
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0119276

Effect of Landscape Pattern on Insect Species Density within Urban Green Spaces in Beijing, China
Cited by: 20
Author(s): Zhimin Su, Xiaoma Li, Weiqi Zhou, Zhiyun Ouyang
Software Mentions: 4
Published: over 11 years ago

10.3390/ijms22147250

Drugs and Epigenetic Molecular Functions. A Pharmacological Data Scientometric Analysis
Cited by: 5
Author(s): Dario Kringel, Sebastian Malkusch, Jörn Lötsch
Software Mentions: 4
Published: about 5 years ago

10.1007/s12520-020-01123-0

Identifying early stages of reindeer domestication in the archaeological record: a 3D morphological investigation on forelimb bones of modern populations from Fennoscandia
Cited by: 22
Author(s): Maxime Pelletier, Antti Kotiaho, Sirpa Niinimäki, Anna‐Kaisa Salmi
Software Mentions: 4
Published: about 6 years ago

10.1186/s12864-020-07118-4

Transcriptome-IPMS analysis reveals a tissue-dependent miR156/SPL13 regulatory mechanism in alfalfa drought tolerance
Cited by: 6
Author(s): Biruk A. Feyissa, Justin B. Renaud, Vida Nasrollahi, Susanne E. Kohalmi, Abdelali Hannoufa
Software Mentions: 4
Published: almost 6 years ago

10.1016/j.isci.2021.102807

Identification of response signatures for tankyrase inhibitor treatment in tumor cell lines
Cited by: 6
Author(s): Line Mygland, Jo Waaler, Martin Frank Strand, Petter Olsen, Aleksandra Aizenshtadt, Kaja Lund, Nina Solberg, Max Lycke, Tor Espen Thorvaldsen, Sandra Espada, Dorna Misaghian, Christian M. Page, Oleg Agafonov, Ståle Nygård, Nai‐Wen Chi, Eva Lin, Jenille Tan, Yihong Yu, Mike Costa, Stefan Krauß, Jo Waaler
Software Mentions: 4
Published: about 5 years ago

10.1107/S2059798318002310

Ensembles generated from crystal structures of single distant homologues solve challenging molecular-replacement cases in<i>AMPLE</i>
Cited by: 14
Author(s): Daniel J. Rigden, Jens M. H. Thomas, Felix Šimkovic, Adam J Simpkin, Martyn Winn, Olga Mayans, Ronan Keegan
Software Mentions: 4
Published: over 8 years ago

10.1107/S2059798317017582

<i>ARCIMBOLDO</i>on coiled coils
Cited by: 39
Author(s): Iracema Caballero, Massimo Sammito, Claudia Millán, А. А. Лебедев, Nicolas Soler, Isabel Usón
Software Mentions: 4
Published: over 8 years ago

10.3390/ijms22179422

Application of Molecular Dynamics Simulations in the Analysis of Cyclodextrin Complexes
Cited by: 28
Author(s): Anna Mazurek, Łukasz Szeleszczuk, Tomasz Gubica
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41598-019-45236-6

In-silico Prediction of Synergistic Anti-Cancer Drug Combinations Using Multi-omics Data
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Author(s): Remzi Çelebi, Oliver Bear Don't Walk, Rajiv Movva, Semih Alpsoy, Michel Dumontier
Software Mentions: 4
Published: about 7 years ago

10.1038/s41598-020-64270-3

PATH - Prediction of Amyloidogenicity by Threading and Machine Learning
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Author(s): Jakub W Wojciechowski, Małgorzata Kotulska
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-64623-y

Comparative analysis of MACROD1, MACROD2 and TARG1 expression, localisation and interactome
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Author(s): Roko Žaja, Gülcan Aydin, Barbara E. Lippok, Regina Feederle, Bernhard Lüscher, Karla L. H. Feijs
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.7225

Differential geographic patterns in song components of male Albert’s lyrebirds
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Author(s): Fiona Backhouse, Anastasia H. Dalziell, Robert D. Magrath, Aaron N. Rice, Taylor L. Crisologo, Justin A. Welbergen
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pcbi.1005659

OpenMM 7: Rapid development of high performance algorithms for molecular dynamics
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Author(s): Peter Eastman, Jason Swails, John D. Chodera, Robert T. McGibbon, Yulan Zhao, Kyle A. Beauchamp, Lee‐Ping Wang, Andrew C. Simmonett, Matthew P. Harrigan, Chaya Stern, Rafal Wiewiora, Bernard R. Brooks, Vijay S. Pande
Software Mentions: 4
Published: about 9 years ago

10.1002/ece3.3682

Rule reversal: Ecogeographical patterns of body size variation in the common treeshrew (Mammalia, Scandentia)
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Author(s): Eric J. Sargis, Virginie Millien, Neal Woodman, Link E. Olson
Software Mentions: 4
Published: over 8 years ago

10.1128/mSystems.00284-18

Systems-Level Analysis of Oxygen Exposure in <i>Zymomonas mobilis</i> : Implications for Isoprenoid Production
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Author(s): Julia Martien, Alexander S. Hebert, David Stevenson, Matthew Regner, Daven B. Khana, Joshua J. Coon, Daniel Amador‐Noguez
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.7620

Prey availability and intraguild competition regulate the spatiotemporal dynamics of a modified large carnivore guild
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Author(s): Robert S. Davis, Richard W. Yarnell, Louise K. Gentle, Antonio Uzal, William O. Mgoola, Emma L. Stone
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.5964

Opening the door to greater phylogeographic inference in Southeast Asia: Comparative genomic study of five codistributed rainforest bird species using target capture and historical DNA
Cited by: 9
Author(s): Haw Chuan Lim, Subir B. Shakya, Michael Harvey, Robert G. Moyle, Robert C. Fleischer, Michael J. Braun, Frederick H. Sheldon
Software Mentions: 4
Published: over 6 years ago

10.1038/srep45017

Nutrient-cycling mechanisms other than the direct absorption from soil may control forest structure and dynamics in poor Amazonian soils
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Author(s): Oriol Grau, Josep Peñuelas, Bruno Ferry, Vincent Freycon, Lilian Blanc, M. Desprez, Christopher Baraloto, Jérôme Chave, Laurent Descroix, Aurélie Dourdain, Stéphane Guitet, Ivan A. Janssens, Jordi Sardans, Bruno Hérault
Software Mentions: 4
Published: over 9 years ago

10.1186/s12982-017-0062-6

Model checking in multiple imputation: an overview and case study
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Author(s): Cattram Nguyen, John B. Carlin, Katherine J. Lee
Software Mentions: 4
Published: almost 9 years ago

10.1002/ece3.929

Evidence for nonallopatric speciation among closely related sympatric<i><scp>H</scp>eliotropium</i>species in the<scp>A</scp>tacama<scp>D</scp>esert
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Author(s): Federico Luebert, Pit Jacobs, Hartmut H. Hilger, Ludo A. H. Muller
Software Mentions: 4
Published: over 12 years ago

10.1002/ece3.2924

Sustained functional composition of pollinators in restored pastures despite slow functional restoration of plants
Cited by: 18
Author(s): Marie Winsa, Erik Öckinger, Riccardo Bommarco, Regina Lindborg, Stuart P. M. Roberts, Johanna Wärnsberg, Ignasi Bartomeus
Software Mentions: 4
Published: over 9 years ago

10.1002/ece3.3925

Environmental determinism, and not interspecific competition, drives morphological variability in Australasian warblers (Acanthizidae)
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Author(s): Vicente García‐Navas, Marta Rodríguez-Rey, Petter Z. Marki, Leslie Christidis
Software Mentions: 4
Published: over 8 years ago

10.3390/sports9050068

An Analysis of Sport-Specific Pain Symptoms through Inter-Individual Training Differences in CrossFit
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Author(s): Maria Alexandra Bernstorff, Norman Schumann, Nader Maai, Thomas A. Schildhauer, Matthias Königshausen
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.4305

Lake regionalization and diatom metacommunity structuring in tropical South America
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Author(s): Xavier Benito, Sherilyn C. Fritz, Miriam Steinitz‐Kannan, María Isabel Álvarez Vélez, Michael M. McGlue
Software Mentions: 4
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10.1016/j.childyouth.2020.105071

Social work contact in a UK cohort study: Under-reporting, predictors of contact and the emotional and behavioural problems of children
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Author(s): Meng Le Zhang, Andrew W. Boyd, Sin Yi Cheung, Elaine Sharland, Jonathan Scourfield
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.5798

The effects of management on vegetation trajectories during the early‐stage restoration of previously arable land after hay transfer
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Author(s): Myriam Garrouj, Didier Alard, Emmanuel Corcket, Lilian Marchand, Marie‐Lise Benot
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.4448

Functional Redundancy in bird community decreases with riparian forest width reduction
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Author(s): Lucas Andrigo Maure, Rodolpho Credo Rodrigues, Ângelo V. Alcântara, Bruno F. C. B. Adorno, Douglas Luiz dos Santos, Eduardo Abreu, Rafael Mitsuo Tanaka, R. Manoel Gonçalves, Érica Hasui
Software Mentions: 4
Published: almost 8 years ago

10.1002/ece3.6404

“A cleaner break”: Genetic divergence between geographic groups and sympatric phenotypes revealed in ballan wrasse (<i>Labrus bergylta</i>)
Cited by: 9
Author(s): Gaute Wilhelmsen Seljestad, María Quintela, Ellika Faust, Kim Tallaksen Halvorsen, François Besnier, Eva Jansson, Geir Dahle, Halvor Knutsen, Carl André, Arild Folkvord, Kevin A. Glover
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.5031

Intraspecific and interspecific trait variability in tadpole meta‐communities from the Brazilian Atlantic rainforest
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Author(s): Mainara Xavier Jordani, Nicolas Mouquet, Lílian Casatti, Marcelo Menin, Denise de Cerqueira Rossa‐Feres, Cécile H. Albert
Software Mentions: 4
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10.1002/ece3.1994

Morphological and niche divergence of pinyon pines
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Author(s): Alejandra Ortíz-Medrano, Daniel P. Scantlebury, Alejandra Vázquez‐Lobo, Alicia Mastretta‐Yanes, Daniel Piñero
Software Mentions: 4
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10.1111/eva.12855

Assessing the potential for assisted gene flow using past introduction of Norway spruce in southern Sweden: Local adaptation and genetic basis of quantitative traits in trees
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Author(s): Pascal Milesi, Mats Berlin, Jun Chen, Marion Orsucci, Lili Li, Gunnar Jansson, Bo Karlsson, Martin Lascoux
Software Mentions: 4
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10.1038/s41598-019-44542-3

Plasmodium pseudo-Tyrosine Kinase-like binds PP1 and SERA5 and is exported to host erythrocytes
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Author(s): Bénédicte Gnangnon, Aline Fréville, Kátia Cailliau, Catherine Leroy, Caroline De Witte, David Tulasne, Alain Martoriarti, Vincent Jung, Ida Chiara Guerrera, Sabrina Marion, Jamal Khalife, Christine Pierrot
Software Mentions: 4
Published: about 7 years ago

10.1364/OE.401117

Microscope-AOtools: a generalised adaptive optics implementation
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Author(s): Nicholas Hall, Josh Titlow, Martin J. Booth, Ian M. Dobbie
Software Mentions: 4
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10.1007/s10858-018-0220-3

NMR-STAR: comprehensive ontology for representing, archiving and exchanging data from nuclear magnetic resonance spectroscopic experiments
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Author(s): Eldon L. Ulrich, Kumaran Baskaran, Hesam Dashti, Yannis Ioannidis, Miron Livny, Pedro Romero, Dimitri Maziuk, Jonathan R. Wedell, Hongyang Yao, Hamid R. Eghbalnia, Jeffrey C. Hoch, John L. Markley
Software Mentions: 4
Published: over 7 years ago

10.7554/eLife.63711

Standardized and reproducible measurement of decision-making in mice
Cited by: 72
Author(s): Valeria Aguillon-Rodriguez, Dora E. Angelaki, H Bayer, Niccolò Bonacchi, Matteo Carandini, Fanny Cazettes, Gaelle Chapuis, Anne K. Churchland, Yang Dan, Eric DeWitt, Mayo Faulkner, Hamish Forrest, Laura Haetzel, Michael Häusser, Sonja B. Hofer, Fei Hu, Anup Khanal, Christopher Krasniak, Inês Laranjeira, Zachary F. Mainen, Guido T. Meijer, Nathaniel J Miska, Thomas D. Mrsic-Flogel, Masayoshi Murakami, Jean‐Paul Noel, Alejandro Pan-Vazquez, Cyrille Rossant, Joshua I. Sanders, Karolina Socha, Rebecca Terry, Anne E Urai, Hernando Vergara, Miles J. Wells, Christian J. Wilson, Ilana B. Witten, Lauren E Wool, Anthony M. Zador
Software Mentions: 4
Published: about 5 years ago

10.3389/fnbeh.2020.618180

PsyCoP – A Platform for Systematic Semi-Automated Behavioral and Cognitive Profiling Reveals Gene and Environment Dependent Impairments of Tcf4 Transgenic Mice Subjected to Social Defeat
Cited by: 8
Author(s): Paul Volkmann, Marius Stephan, Sven Krackow, Niels Rosendal Jensen, Moritz J. Rossner
Software Mentions: 4
Published: over 5 years ago

10.3389/fpsyt.2020.532623

Identification of Veterans With PTSD Based on EEG Features Collected During Sleep
Cited by: 3
Author(s): Swamy Laxminarayan, Chao Wang, Tatsuya Oyama, J David Cashmere, Anne Germain, Jaques Reifman
Software Mentions: 4
Published: almost 6 years ago

10.3389/fcimb.2021.573923

Impact of the Gut Microbiome on the Progression of Hepatitis B Virus Related Acute-on-Chronic Liver Failure
Cited by: 6
Author(s): Xuebing Yao, Haiping Yu, Guoyin Fan, Haihong Xiang, Li‐Hong Long, Hui Xu, Zhiguo Wu, Mingfa Chen, Wen-Na Xi, Gao Z, Cuiyun Liu, Wenlan Gong, Aoyu Yang, Ke Sun, Rongyan Yu, Junrong Liang, Baogang Xie, Shihui Sun
Software Mentions: 4
Published: over 5 years ago

10.1093/jisesa/ieab027

Field Borders Provide Winter Refuge for Beneficial Predators and Parasitoids: A Case Study on Organic Farms
Cited by: 7
Author(s): C. Scott Clem, Alexandra N. Harmon‐Threatt
Software Mentions: 4
Published: over 5 years ago

10.1098/rsos.201797

Seasonal shifts in the competitive ability of macroalgae influence the outcomes of coral–algal competition
Cited by: 6
Author(s): Kristen T. Brown, Dorothea Bender-Champ, Ove Hoegh‐Guldberg, Sophie Dove
Software Mentions: 4
Published: over 5 years ago

10.1007/s10764-018-0069-z

Food-Offering Calls in Wild Golden Lion Tamarins (Leontopithecus rosalia): Evidence for Teaching Behavior?
Cited by: 9
Author(s): Camille A. Troisi, William Hoppitt, Carlos R. Ruiz‐Miranda, Kevin N. Laland
Software Mentions: 4
Published: over 7 years ago

10.1111/tbed.13661

Different environmental gradients associated to the spatiotemporal and genetic pattern of the H5N8 highly pathogenic avian influenza outbreaks in poultry in Italy
Cited by: 6
Author(s): Francesca Scolamacchia, Paolo Mulatti, Matteo Mazzucato, Marco Barbujani, William T. Harvey, Alice Fusaro, Isabella Monne, Stefano Marangon
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2019.00167

The Environment and Cyanophage Diversity: Insights From Environmental Sequencing of DNA Polymerase
Cited by: 14
Author(s): Jan F. Finke, Curtis A. Suttle
Software Mentions: 4
Published: over 7 years ago

10.1007/s00251-014-0819-9

Different binding motifs of the celiac disease-associated HLA molecules DQ2.5, DQ2.2, and DQ7.5 revealed by relative quantitative proteomics of endogenous peptide repertoires
Cited by: 79
Author(s): Elin Bergseng, Siri Dørum, Magnus Ø. Arntzen, Morten Nielsen, Ståle Nygård, Søren Buus, Gustavo Souza, Ludvig M. Sollid
Software Mentions: 4
Published: over 11 years ago

10.3389/fmicb.2016.00403

Spatial and Temporal Variation of Cultivable Communities of Co-occurring Endophytes and Pathogens in Wheat
Cited by: 58
Author(s): Morgane Comby, Sandrine Lacoste, Fabienne Baillieul, Camille Profizi, Joëlle Dupont
Software Mentions: 4
Published: over 10 years ago

10.3389/fmicb.2018.01290

Synchrony of Eukaryotic and Prokaryotic Planktonic Communities in Three Seasonally Sampled Austrian Lakes
Cited by: 23
Author(s): Christina Böck, Michaela M. Salcher, Manfred Jensen, Ram Vinay Pandey, Jens Boenigk
Software Mentions: 4
Published: about 8 years ago

10.1038/srep37712

Inter-annual maintenance of the fine-scale genetic structure in a biennial plant
Cited by: 9
Author(s): Javier Valverde, José M. Gómez, Cristina García, Timothy F. Sharbel, M.N. Jiménez, Francisco Perfectti
Software Mentions: 4
Published: over 9 years ago

10.2196/medinform.9170

Adverse Drug Event Discovery Using Biomedical Literature: A Big Data Neural Network Adventure
Cited by: 44
Author(s): Ahmad P. Tafti, Jonathan C. Badger, Eric LaRose, Ehsan Shirzadi, Andrea Mahnke, John Mayer, Zhan Ye, David Page, Peggy L. Peissig
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2015.01500

Dynamics of Bacterial Community Composition in the Malaria Mosquito's Epithelia
Cited by: 68
Author(s): Majoline T. Tchioffo, Anne Boissière, Luc Abate, Sandrine E. Nsango, Albert N. Bayibéki, Parfait Awono-Ambene, Richard Christen, Geoffrey Gimonneau, Isabelle Morlais
Software Mentions: 4
Published: over 10 years ago

10.1186/s12983-019-0345-6

Characteristics of tiger moth (Erebidae: Arctiinae) anti-bat sounds can be predicted from tymbal morphology
Cited by: 7
Author(s): Nicolas J. Dowdy, William E. Conner
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.2730

Designing better frog call recognition models
Cited by: 12
Author(s): Paul Crump, Jeff E. Houlahan
Software Mentions: 4
Published: over 9 years ago

10.1002/ece3.1824

Earlier breeding, lower success: does the spatial scale of climatic conditions matter in a migratory passerine bird?
Cited by: 10
Author(s): Annegret Grimm, B. Weiß, Lars Kulik, Jean‐Baptiste Mihoub, Roger Mundry, Ulrich Köppen, Tomas Brueckmann, Ruth Thomsen, Anja Widdig
Software Mentions: 4
Published: over 10 years ago

10.1002/ece3.4276

Local trampling disturbance effects on alpine plant populations and communities: Negative implications for climate change vulnerability
Cited by: 14
Author(s): Nathalie Isabelle Chardon, Sonja Wipf, Christian Rixen, Annabarbara Beilstein, Daniel F. Doak
Software Mentions: 4
Published: about 8 years ago

10.1038/s41598-019-41298-8

Regeneration associated transcriptional signature of retinal microglia and macrophages
Cited by: 54
Author(s): Diana Mitchell, Chi Sun, Samuel S. Hunter, Daniel D. New, Deborah L. Stenkamp
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-019-39274-3

Genome analysis of the rice coral Montipora capitata
Cited by: 49
Author(s): Alexander Shumaker, Hollie M. Putnam, Huan Qiu, Dana C. Price, Ehud Zelzion, Amnon Harel, Nicole Wagner, Ruth D. Gates, Hwan Su Yoon, Debashish Bhattacharya
Software Mentions: 4
Published: over 7 years ago

10.3389/fpls.2015.00967

The effector repertoire of Fusarium oxysporum determines the tomato xylem proteome composition following infection
Cited by: 55
Author(s): Fleur Gawehns, Lisong Ma, Oskar Bruning, Petra M. Houterman, Sjef Boeren, Ben J. C. Cornelissen, Martijn Rep, Frank L. W. Takken
Software Mentions: 4
Published: almost 11 years ago

10.1002/ece3.5842

Spatially explicit models of seasonal habitat for greater sage‐grouse at broad spatial scales: Informing areas for management in Nevada and northeastern California
Cited by: 13
Author(s): Peter S. Coates, Brianne E. Brussee, Mark A. Ricca, John P. Severson, Michael L. Casazza, K. Benjamin Gustafson, Shawn P. Espinosa, Scott Gardner, David J. Delehanty
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.5705

Current ecology, not ancestral dispersal patterns, influences menopause symptom severity
Cited by: 6
Author(s): Yuping Yang, Megan Arnot, Ruth Mace
Software Mentions: 4
Published: almost 7 years ago

10.1002/ece3.5709

Evolutionary history predicts high‐impact invasions by herbivorous insects
Cited by: 26
Author(s): Angela M. Mech, Kathryn A. Thomas, Travis D. Marsico, Daniel A. Herms, Craig R. Allen, Matthew P. Ayres, Kamal J. K. Gandhi, Jessica Gurevitch, Nathan P. Havill, Ruth A. Hufbauer, Andrew M. Liebhold, Kenneth F. Raffa, Ashley N. Schulz, Daniel R. Uden, Patrick C. Tobin
Software Mentions: 4
Published: almost 7 years ago