Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.65381

https://doi.org/10.7554/eLife.65381

Evidence for additive and synergistic action of mammalian enhancers during cell fate determination

Cited by: 53
Author(s): Jinmi Choi, Kseniia Lysakovskaia, Grégoire Stik, Carina Demel, Johannes Söding, Tian V. Tian, Thomas Graf, Patrick Cramer
Published: over 3 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: TFBSTools
Software Package for Transcription Factor Binding Site (TFBS) Analysis
Papers that mentioned: 33
cran: DEoptim
Global Optimization by Differential Evolution
Papers that mentioned: 18
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203