10.1038/s41598-021-88577-x

Predicting range shifts of three endangered endemic plants of the Khorassan-Kopet Dagh floristic province under global change
Cited by: 20
Author(s): Mohammad Bagher Erfanian, Mostafa Sagharyan, Farshid Memariani, Hamid Ejtehadi
Software Mentions: 4
Published: over 5 years ago

10.7717/peerj.9380

Multi-predator assemblages, dive type, bathymetry and sex influence foraging success and efficiency in African penguins
Cited by: 17
Author(s): Grace J. Sutton, Lorien Pichegru, Julia Botha, Abbas Z. Kouzani, Scott Adams, Charles A. Bost, John P. Y. Arnould
Software Mentions: 4
Published: about 6 years ago

10.3389/fcell.2021.668833

Detection of Hematopoietic Stem Cell Transcriptome in Human Fetal Kidneys and Kidney Organoids Derived From Human Induced Pluripotent Stem Cells
Cited by: 3
Author(s): Jin Wook Hwang, Christophe Desterke, Julien Loisel‐Duwattez, Frank Griscelli, Annelise Bennaceur‐Griscelli, Ali G Turhan
Software Mentions: 4
Published: about 5 years ago

10.1016/j.jalz.2019.03.007

Inflammatory biomarkers in Alzheimer's disease plasma
Cited by: 118
Author(s): Angharad R. Morgan, Samuel Touchard, Claire Leckey, Caroline O’Hagan, Alejo J. Nevado‐Holgado, Frederik Barkhof, Lars Bertram, Olivier Blin, Isabelle Bos, Valerija Dobričić, Sebastiaan Engelborghs, Giovanni B. Frisoni, Lutz Frölich, Silvey Gabel, Peter Johannsen, Petronella Kettunen, Iwona Kłoszewska, Cristina Legido‐Quigley, Alberto Lleó, Pablo Martínez-Lage, Patrizia Mecocci, Karen Meersmans, José Luís Molinuevo, Gwendoline Peyratout, Julius Popp, Jill C. Richardson, Isabel Sala, Philip Scheltens, Johannes Streffer, Hikka Soininen, Mikel Tainta, Charlotte E. Teunissen, Magda Tsolaki, Rik Vandenberghe, Pieter Jelle Visser, Stephanie J.B. Vos, Lars‐Olof Wahlund, Anders Wallin, Sarah Westwood, Henrik Zetterberg, Simon Lovestone, B. Paul Morgan, Alzheimer’s Disease
Software Mentions: 4
Published: over 7 years ago

10.1186/s12870-020-02744-2

Application of genome-wide insertion/deletion markers on genetic structure analysis and identity signature of Malus accessions
Cited by: 6
Author(s): Xuan Wang, Fei Shen, Yuan Gao, Kun Wang, Ruiting Chen, Jun Luo, Lili Yang, Xi Zhang, Changwei Qiu, Wei Li, Ting Wu, Xuefeng Xu, Yi Wang, Cong Peng, Zhenhai Han, Xinzhong Zhang
Software Mentions: 4
Published: over 5 years ago

10.1093/iob/obz031

Cardiac Performance of Free-Swimming Wild Sockeye Salmon during the Reproductive Period
Cited by: 4
Author(s): Tanya S. Prystay, Robert de Bruijn, Kathryn S. Peiman, Scott G. Hinch, D. Patterson, Anthony P. Farrell, Erika J. Eliason, Steven J. Cooke
Software Mentions: 4
Published: over 6 years ago

10.1186/s12862-021-01870-1

Differential allocation in a gift-giving spider: males adjust their reproductive investment in response to female condition
Cited by: 4
Author(s): Diego Solano-Brenes, Luiz Ernesto Costa-Schmidt, María J. Albo, Glauco Machado
Software Mentions: 4
Published: about 5 years ago

10.1111/eva.12894

Mate choice, reproductive success and inbreeding in white rhinoceros: New insights for conservation management
Cited by: 13
Author(s): Petra Kretzschmar, Hailie Auld, Peter T. Boag, Udo Gansloßer, C. Scott, Peter J. Van Coeverden de Groot, Alexandre Courtiol
Software Mentions: 4
Published: over 6 years ago

10.1038/s42003-021-02289-6

Predicting the probability of death using proteomics
Cited by: 7
Author(s): Thjodbjorg Eiriksdottir, Steinthor Ardal, Benedikt Atli Jónsson, Sigrún H. Lund, Erna V. Ívarsdóttir, Kristjan Norland, Egil Ferkingstad, Hreinn Stefánsson, Ingileif Jónsdóttir, Hilma Hólm, Thorunn Rafnar, Jona Saemundsdottir, Gudmundur L. Norddahl, Guðmundur Þorgeirsson, Daníel F. Guðbjartsson, Patrick Sulem, Unnur Þorsteinsdóttir, Kári Stefansson, Magnus O. Ulfarsson
Software Mentions: 4
Published: about 5 years ago

10.1186/s12870-019-2193-0

Variation in plastid genomes in the gynodioecious species Silene vulgaris
Cited by: 7
Author(s): Manuela Krüger, Oushadee A. J. Abeyawardana, Miloslav Juříček, Claudia Krüger, Helena Štorchová
Software Mentions: 4
Published: over 6 years ago

10.1186/1746-6148-9-58

Impact of genetic variation and geographic distribution of porcine reproductive and respiratory syndrome virus on infectivity and pig growth
Cited by: 7
Author(s): Bouabid Badaoui, Roberto Grande, Stefano Calza, María C. Cecere, M. Luini, Alessandra Stella, Sara Botti
Software Mentions: 4
Published: over 13 years ago

10.1016/j.immuni.2021.03.002

Multi-cohort analysis of host immune response identifies conserved protective and detrimental modules associated with severity across viruses
Cited by: 40
Author(s): Hong Zheng, A. Koneti Rao, Denis Đermadi, Jiaying Toh, Lara Jones, Michèle Donato, Yiran E. Liu, Yapeng Su, Dai Cl, Sergey A. Kornilov, Minas Karagiannis, Theodoros Marantos, Yehudit Hasin-Brumshtein, Yudong He, Evangelos J. Giamarellos‐Bourboulis, James R. Heath, Purvesh Khatri
Software Mentions: 4
Published: over 5 years ago

10.12688/f1000research.2-71.v2

Using Akaike's information theoretic criterion in mixed-effects modeling of pharmacokinetic data: a simulation study
Cited by: 17
Author(s): Erik Olofsen, Albert Dahan
Software Mentions: 4
Published: about 12 years ago

10.1099/mgen.0.000335

Discordant bioinformatic predictions of antimicrobial resistance from whole-genome sequencing data of bacterial isolates: an inter-laboratory study
Cited by: 56
Author(s): Ronan Doyle, Denise M O’Sullivan, Sean Aller, Sebastian Bruchmann, Taane G. Clark, Andreu Coello Pelegrin, Martin Cormican, Ernest Diez Benavente, Matthew J. Ellington, Elaine McGrath, Yair Motro, Thi Phuong Thuy Nguyen, Jody Phelan, Liam Shaw, Richard Stabler, Alex van Belkum, Lucy van Dorp, Neil Woodford, Jacob Moran-Gilad, Jim F. Huggett, Kathryn Harris
Software Mentions: 4
Published: over 6 years ago

10.1007/s10164-017-0530-z

Influence of aging on brain and web characteristics of an orb web spider
Cited by: 8
Author(s): Alain Pasquet, Camille Toscani, Mylène Anotaux
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0201368

Biodiversity thresholds in invertebrate communities: The responses of dung beetle subgroups to forest loss
Cited by: 10
Author(s): Clarissa Machado Pinto-Leite, Eduardo Mariano‐Neto, Pedro Luís Bernardo da Rocha
Software Mentions: 4
Published: almost 8 years ago

10.1038/s41598-020-71476-y

Benefits of tunnel handling persist after repeated restraint, injection and anaesthesia
Cited by: 21
Author(s): Lindsay J. Henderson, Bridgette Dani, Esme M N Serrano, Tom V. Smulders, J. V. Roughan
Software Mentions: 4
Published: almost 6 years ago

10.3389/fpsyg.2020.00785

The Effect of Domestication and Experience on the Social Interaction of Dogs and Wolves With a Human Companion
Cited by: 24
Author(s): Martina Lazzaroni, Friederike Range, Jessica Backes, Katrin Portele, Katharina Scheck, Sarah Marshall-Pescini
Software Mentions: 4
Published: over 6 years ago

10.1098/rsbl.2020.0299

Indirect genetic control of migration in a salmonid fish
Cited by: 6
Author(s): Suzanne J. Kelson, Stephanie M. Carlson, Michael R. Miller
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0253264

Dietary vitamin E reaches the mitochondria in the flight muscle of zebra finches but only if they exercise
Cited by: 6
Author(s): Clara Cooper-Mullin, Wales A. Carter, Ronald S. Amato, David W. Podlesak, Scott R. McWilliams
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-017-02810-0

Cumulative impacts: thermally bleached corals have reduced capacity to clear deposited sediment
Cited by: 29
Author(s): Pia Bessell-Browne, Andrew P. Negri, Rebecca Fisher, Peta L. Clode, Ross Jones
Software Mentions: 4
Published: about 9 years ago

10.1371/journal.pone.0058114

Spatial Segregation within the Spawning Migration of North Eastern Atlantic Mackerel (Scomber scombrus) as Indicated by Juvenile Growth Patterns
Cited by: 18
Author(s): Teunis Jansen, Andrew C. Campbell, Thomas Brunel, Lotte Worsøe Clausen
Software Mentions: 4
Published: over 13 years ago

10.1038/s41424-018-0059-7

First Degree Relatives of Patients with Celiac Disease Harbour an Intestinal Transcriptomic Signature that Might Protect them from Enterocyte Damage
Cited by: 5
Author(s): Pragyan Acharya, Rintu Kutum, Rajesh Pandey, Abhishek Mishra, Ratan K. Saha, Akshay Munjal, Vineet Ahuja, Mitali Mukerji, Govind Makharia
Software Mentions: 4
Published: almost 8 years ago

10.1038/s41598-020-69564-0

Evidence for long-term seamount-induced chlorophyll enhancements
Cited by: 21
Author(s): Astrid B. Leitner, Anna B. Neuheimer, Jeffrey C. Drazen
Software Mentions: 4
Published: about 6 years ago

10.1186/s13058-017-0920-8

Establishing and characterizing patient-derived xenografts using pre-chemotherapy percutaneous biopsy and post-chemotherapy surgical samples from a prospective neoadjuvant breast cancer study
Cited by: 53
Author(s): Jia Yu, Bo Qin, Ann M. Moyer, Jason P. Sinnwell, Kevin J. Thompson, John A. Copland, Laura A. Marlow, James L. Miller, Ping Yin, Bowen Gao, Katherine Minter-Dykhouse, Xiaojia Tang, Sarah A. McLaughlin, Alvaro Moreno-Aspitia, Anthony Schweitzer, Yan Lü, J. C. Hubbard, Donald W. Northfelt, Richard Gray, Katie N. Hunt, Amy Lynn Conners, Vera J. Suman, Krishna R. Kalari, James N. Ingle, Zhenkun Lou, Daniel W. Visscher, Richard M. Weinshilboum, Judy C. Boughey, Matthew P. Goetz, Liewei Wang
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0212725

Forest fragmentation and impacts of intensive agriculture: Responses from different tree functional groups
Cited by: 5
Author(s): Juliana Cristina Tenius Ribeiro, André Felippe Nunes-Freitas, E. C. C. Fidalgo, Mariella Camardelli Uzêda
Software Mentions: 4
Published: almost 7 years ago

10.1111/mec.13186

Ecological host fitting of <i> <scp>T</scp> rypanosoma cruzi </i> <scp>T</scp> c <scp>I</scp> in <scp>B</scp> olivia: mosaic population structure, hybridization and a role for humans in <scp>A</scp> ndean parasite dispersal
Cited by: 37
Author(s): Louisa A. Messenger, Lineth García, Mathieu Vanhove, Carlos Huaranca, Marinely Bustamante, Mary-Cruz Torrico, Faustino Torrico, Michael A. Miles, Martin S. Llewellyn
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pone.0235263

Visualisation tools for dependent peptide searches to support the exploration of in vitro protein modifications
Cited by: 2
Author(s): George W. Preston, Liping Yang, David H. Phillips, Claudia S. Maier
Software Mentions: 4
Published: about 6 years ago

10.1038/s41598-020-66502-y

Quantifying the immediate computational effects of preceding outcomes on subsequent risky choices
Cited by: 6
Author(s): Hayley R. Brooks, Peter Sokol‐Hessner
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0237277

Causal graph analysis of COVID-19 observational data in German districts reveals effects of determining factors on reported case numbers
Cited by: 14
Author(s): Edgar Steiger, Tobias Mussgnug, Lars Eric Kroll
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.6831

Salinity, not genetic incompatibilities, limits the establishment of the invasive hybrid cattail <i>Typha</i> × <i>glauca</i> in coastal wetlands
Cited by: 8
Author(s): Kathryn Tisshaw, Joanna R. Freeland, Marcel E. Dorken
Software Mentions: 4
Published: almost 6 years ago

10.3390/insects11060371

Modified Atmosphere Does Not Reduce the Efficacy of Phytosanitary Irradiation Doses Recommended for Tephritid Fruit Flies
Cited by: 10
Author(s): Vanessa Dias, Guy J. Hallman, Olga Yaneth Martínez-Barrera, Nick V Hurtado, A. A. Cardoso, Andrew G. Parker, Luis A. Caravantes, Camilo Rivera, Alexandre S Araújo, Florence Maxwell, Carlos E Cáceres-Barrios, Marc J. B. Vreysen, Scott W. Myers
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.7523

A deep dive into fat: Investigating blubber lipidomic fingerprint of killer whales and humpback whales in northern Norway
Cited by: 9
Author(s): Pierre Bories, Audun H. Rikardsen, P.E.G. Leonards, Aaron T. Fisk, Sabrina Tartu, Emma F. Vogel, Jenny Bytingsvik, Pierre Blévin
Software Mentions: 4
Published: about 5 years ago

10.1098/rspb.2017.0391

Manipulation of feeding regime alters sexual dimorphism for lifespan and reduces sexual conflict in <i>Drosophila melanogaster</i>
Cited by: 15
Author(s): Elizabeth M. L. Duxbury, Wayne G. Rostant, Tracey Chapman
Software Mentions: 4
Published: about 9 years ago

10.1111/evo.12705

Parallel trait adaptation across opposing thermal environments in experimental<i>Drosophila melanogaster</i>populations
Cited by: 35
Author(s): Raymond Tobler, Joachim Hermisson, Christian Schlötterer
Software Mentions: 4
Published: about 11 years ago

10.1098/rsos.180205

Effects of dimming light-emitting diode street lights on light-opportunistic and light-averse bats in suburban habitats
Cited by: 20
Author(s): Elizabeth G. Rowse, Stephen Harris, Gareth Jones
Software Mentions: 4
Published: about 8 years ago

10.1002/jrsm.1347

Pitfalls of using the risk ratio in meta‐analysis
Cited by: 36
Author(s): Ilyas Bakbergenuly, David C. Hoaglin, Elena Kulinskaya
Software Mentions: 4
Published: over 7 years ago

10.1038/s41437-020-0348-2

The influence of a priori grouping on inference of genetic clusters: simulation study and literature review of the DAPC method
Cited by: 65
Author(s): Joshua M. Miller, Catherine I. Cullingham, Rhiannon Peery
Software Mentions: 4
Published: almost 6 years ago

10.1099/mgen.0.000543

The structure and diversity of strain-level variation in vaginal bacteria
Cited by: 8
Author(s): Brett A. Tortelli, Amanda L. Lewis, Justin C. Fay
Software Mentions: 4
Published: over 5 years ago

10.1186/s40462-021-00264-8

Caution is warranted when using animal space-use and movement to infer behavioral states
Cited by: 9
Author(s): Frances E. Buderman, Tess M. Gingery, Duane R. Diefenbach, Laura C. Gigliotti, Danielle R. Begley-Miller, Marc E. McDill, Bret D. Wallingford, Christopher S. Rosenberry, Patrick J. Drohan
Software Mentions: 4
Published: about 5 years ago

10.1128/MRA.00832-19

Draft Genome Sequences of Enterococcus faecalis Strains Isolated from Healthy Japanese Individuals
Cited by: 2
Author(s): Kazuki Tanaka, Tsubasa Watabe, Koichi Kato, Tomoya Tsukimi, Mitsuhiko Sato, Toshitaka Odamaki, Masaru Tomita, Shinji Fukuda
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0131697

Spatial and Temporal Characteristics of Pastoral Mobility in the Far North Region, Cameroon: Data Analysis and Modeling
Cited by: 20
Author(s): Ningchuan Xiao, Shanshan Cai, Mark Moritz, Rebecca Garabed, Laura W. Pomeroy
Software Mentions: 4
Published: about 11 years ago

10.1186/s13073-018-0575-9

Increased DNA methylation variability in rheumatoid arthritis-discordant monozygotic twins
Cited by: 60
Author(s): Amy P Webster, Darren Plant, Simone Ecker, Flore Zufferey, Jordana T. Bell, Andrew Feber, Dirk S. Paul, Stephan Beck, Anne Barton, Frances Williams, Jane Worthington
Software Mentions: 4
Published: almost 8 years ago

10.1038/s41598-020-58415-7

Larval exposure to a pyrethroid insecticide and competition for food modulate the melanisation and antibacterial responses of adult Anopheles gambiae
Cited by: 9
Author(s): Gaël Hauser, Jacob C. Koella
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0233597

Diversification rate vs. diversification density: Decoupled consequences of plant height for diversification of Alooideae in time and space
Cited by: 9
Author(s): Florian C. Boucher, Anne-Sophie Quatela, Allan G. Ellis, G. Anthony Verboom
Software Mentions: 4
Published: about 6 years ago

10.1038/s41419-021-04075-y

A Catalogus Immune Muris of the mouse immune responses to diverse pathogens
Cited by: 0
Author(s): Céline Barlier, Diego Barriales, Alexey Samosyuk, Sascha Jung, Srikanth Ravichandran, Yulia A. Medvedeva, Juan Anguíta, Antonio del Sol
Software Mentions: 4
Published: almost 5 years ago

10.1007/s00442-020-04754-1

Seasonal and daily shifts in behavior and resource selection: how a carnivore navigates costly landscapes
Cited by: 16
Author(s): E. Hance Ellington, Erich M. Muntz, Stanley D. Gehrt
Software Mentions: 4
Published: almost 6 years ago

10.1186/s40168-020-0788-1

Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss
Cited by: 37
Author(s): Sven-Bastiaan Haange, Nico Jehmlich, Ute Krügel, Constantin A. Hintschich, Dorothee Wehrmann, Mohammed K. Hankir, Florian Seyfried, Jean Froment, Thomas Hübschmann, Susann Müller, Dirk K. Wissenbach, Kang Kang, Christian Buettner, Gianni Panagiotou, Matthias Noll, Ulrike Rolle-Kampczyk, Wiebke Fenske, Martin von Bergen
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0070219

Can Yeast (S. cerevisiae) Metabolic Volatiles Provide Polymorphic Signaling?
Cited by: 28
Author(s): J. Roman Arguello, Carolina Sellanes, Yann‐Ru Lou, Robert A. Raguso
Software Mentions: 4
Published: almost 13 years ago

10.1007/s10661-019-8042-7

Surveying the arable plant diversity of conventionally managed farmland: a comparison of methods
Cited by: 3
Author(s): Alexander Wietzke, Christoph Leuschner
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-019-51800-x

Clinical Factors Associated with Time-Specific Distribution of 18F-Fluorodeoxyglucose in Large-Vessel Vasculitis
Cited by: 20
Author(s): Joel Rosenblum, Kaitlin A. Quinn, Casey A. Rimland, Nehal N. Mehta, Mark A. Ahlman, Peter C. Grayson
Software Mentions: 4
Published: almost 7 years ago

10.1186/s40168-019-0707-5

Comparison of the microbiomes of two drinking water distribution systems—with and without residual chloramine disinfection
Cited by: 55
Author(s): Michael B. Waak, Raymond M. Hozalski, Cynthia Hallé, Timothy M. LaPara
Software Mentions: 4
Published: about 7 years ago

10.3390/microorganisms9020438

Phylogenetic Characterization of Crimean-Congo Hemorrhagic Fever Virus Detected in African Blue Ticks Feeding on Cattle in a Ugandan Abattoir
Cited by: 10
Author(s): Eddie M. Wampande, Peter Waiswa, David J. Allen, Roger Hewson, Simon D. W. Frost, Sam Stubbs
Software Mentions: 4
Published: over 5 years ago

10.3390/insects11070441

Genetic Diversity in Invasive Populations of Argentine Stem Weevil Associated with Adaptation to Biocontrol
Cited by: 11
Author(s): Thomas W. R. Harrop, Marissa F. Le Lec, Ruy Jáuregui, Shannon E. Taylor, Sarah N Inwood, Tracey Van Stijn, Hannah M. Henry, John Skelly, Siva Ganesh, Rachael Ashby, Jeanne M. E. Jacobs, S. L. Goldson, Peter K. Dearden
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.1795

Interspecific interactions change the outcome of sexual conflict over prehatching parental investment in the burying beetle<i>Nicrophorus vespilloides</i>
Cited by: 13
Author(s): Ornela De Gasperin, Rebecca M. Kilner
Software Mentions: 4
Published: over 10 years ago

10.1099/mgen.0.000095

Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selection
Cited by: 16
Author(s): Andrew C. Barnes, J. Delamare-Deboutteville, Nicholas Gudkovs, Cara L. Brosnahan, R. I. Guy Morrison, J Carson
Software Mentions: 4
Published: over 9 years ago

10.1099/mgen.0.000205

Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial-resistance determinants and lineages
Cited by: 37
Author(s): Koji Yahara, Shuichi Nakayama, Ken Shimuta, Ken-ichi Lee, Masatomo Morita, Takuya Kawahata, Toshiro Kuroki, Yuko Watanabe, Hitomi Ohya, Mitsuru Yasuda, Takashi Deguchi, Xavier Didelot, Makoto Ohnishi
Software Mentions: 4
Published: almost 8 years ago

10.1098/rsos.200577

Group dominance increases territory size and reduces neighbour pressure in wild chimpanzees
Cited by: 19
Author(s): Sylvain Lemoine, Christophe Boesch, Anna Preis, Liran Samuni, Catherine Crockford, Roman M. Wittig
Software Mentions: 4
Published: about 6 years ago

10.1111/1755-0998.12567

<i>apex</i> : phylogenetics with multiple genes
Cited by: 22
Author(s): Thibaut Jombart, Frederick I. Archer, Klaus Schliep, Zhian N. Kamvar, Rebecca B. Harris, Emmanuel Paradis, Jérôme Goudet, Hilmar Lapp
Software Mentions: 4
Published: almost 10 years ago

10.1093/cid/ciz1186

Cotrimoxazole Prophylaxis Increases Resistance Gene Prevalence and α-Diversity but Decreases β-Diversity in the Gut Microbiome of Human Immunodeficiency Virus–Exposed, Uninfected Infants
Cited by: 33
Author(s): Alaric W. D’Souza, Eshia Moodley-Govender, Bertram M. Berla, Tejas Kelkar, Bin Wang, Xiaoqing Sun, Brodie Daniels, Anna Coutsoudis, Indi Trehan, Gautam Dantas
Software Mentions: 4
Published: over 6 years ago

10.1099/mgen.0.000582

Achromobacter spp. genetic adaptation in cystic fibrosis
Cited by: 4
Author(s): Miglė Gabrielaitė, Finn C. Nielsen, Helle Krogh Johansen, Rasmus Lykke Marvig
Software Mentions: 4
Published: about 5 years ago

10.1186/s40462-020-00229-3

Reptiles on the wrong track? Moving beyond traditional estimators with dynamic Brownian Bridge Movement Models
Cited by: 21
Author(s): Inês Silva, Matt Crane, Benjamin Michael Marshall, Colin Thomas Strine
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.ppat.1008998

Gallbladder carriage generates genetic variation and genome degradation in Salmonella Typhi
Cited by: 15
Author(s): Duy Pham Thanh, Nga Tran Vu Thieu, To Nguyen Thi Nguyen, Ho Ngoc Dan Thanh, Sabina Dongol, Abhilasha Karkey, Megan E Carey, Buddha Basnyat, Gordon Dougan, Maia A. Rabaa, Stephen Baker
Software Mentions: 4
Published: almost 6 years ago

10.1093/molbev/msaa323

Genome Reduction Is Associated with Bacterial Pathogenicity across Different Scales of Temporal and Ecological Divergence
Cited by: 40
Author(s): Gemma G. R. Murray, Jane Charlesworth, Eric L. Miller, Michael J. Casey, Catrin Lloyd, Marcelo Gottschalk, Alexander W. Tucker, John J. Welch, Lucy A. Weinert
Software Mentions: 4
Published: over 5 years ago

10.1111/mec.12462

Divergent evolutionary processes associated with colonization of offshore islands
Cited by: 88
Author(s): Natália Martínková, Ross Barnett, Thomas Cucchi, Rahel Struchen, M. Pascal, Michel Pascal, Martin C. Fischer, Thomas Higham, Selina Brace, Simon Y. W. Ho, Jean‐Pierre Quéré, Paul O’Higgins, Laurent Excoffier, Gerald Heckel, A. Rus Hoelzel, Keith Dobney, Jeremy B. Searle
Software Mentions: 4
Published: almost 13 years ago

10.1186/s12859-019-2804-7

pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS)
Cited by: 40
Author(s): Stefan Graw, Rosalyn Henn, Jeffrey Thompson, Devin C. Koestler
Software Mentions: 4
Published: over 7 years ago

10.1111/mec.14865

Species-complex diversification and host-plant associations in <i>Bemisia tabaci</i> : A plant-defence, detoxification perspective revealed by RNA-Seq analyses
Cited by: 37
Author(s): Osnat Malka, Diego Santos-García, Ester Feldmesser, Elad Sharon, Renate Krause‐Sakate, Hélène Delatte, Sharon van Brunschot, Mitulkumar V. Patel, Paul Visendi, Habibu Mugerwa, Susan Seal, John Colvin, Shai Morin
Software Mentions: 4
Published: almost 8 years ago

10.1038/s41598-020-71905-y

Whole transcriptome approach to evaluate the effect of aluminium hydroxide in ovine encephalon
Cited by: 9
Author(s): Endika Varela-Martínez, Martin Bilbao‐Arribas, Naiara Abendaño, Javier Asín, Marta Pérez, Damián F. de Andrés, Lluís Luján, Begoña M. Jugo
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0184677

Simple yet effective: Historical proximity variables improve the species distribution models for invasive giant hogweed (Heracleum mantegazzianum s.l.) in Poland
Cited by: 7
Author(s): Piotr Mędrzycki, Ingeborga Jarzyna, Artur Obidziński, B. Tokarska-Guzik, Zofia Sotek, Piotr Pabjanek, Adam Pytlarczyk, Izabela Sachajdakiewicz
Software Mentions: 4
Published: almost 9 years ago

10.1002/1878-0261.12849

Molecular genomic features associated with<i>in vitro</i>response of the NCI‐60 cancer cell line panel to natural products
Cited by: 10
Author(s): Julia Krushkal, Simarjeet Negi, Laura M. Yee, Jason R. Evans, Tanja Grkovic, Alida Palmisano, Jianwen Fang, Hari Sankaran, Lisa M. McShane, Yingdong Zhao, Barry R. O’Keefe
Software Mentions: 4
Published: over 5 years ago

10.1186/s40462-017-0117-x

Life-history strategy, resource dispersion and phylogenetic associations shape dispersal of a fig wasp community
Cited by: 9
Author(s): Vignesh Venkateswaran, Amitabh Shrivastava, Anusha L. K. Kumble, Renée M. Borges
Software Mentions: 4
Published: over 8 years ago

10.1098/rsos.160992

Mixing of porpoise ecotypes in southwestern UK waters revealed by genetic profiling
Cited by: 30
Author(s): Michaël C. Fontaine, Olivier Thatcher, Nicolas Ray, Sylvain Piry, Andrew Brownlow, Nicholas J. Davison, Paul D. Jepson, Rob Deaville, Simon J. Goodman
Software Mentions: 4
Published: over 9 years ago

10.1007/s00227-016-2922-y

Changes in behaviour drive inter-annual variability in the at-sea distribution of northern gannets
Cited by: 18
Author(s): Victoria Warwick-Evans, Philip W. Atkinson, John P. Y. Arnould, Roland D Gauvain, Louise Soanes, Leonie A. Robinson, Jonathan A. Green
Software Mentions: 4
Published: about 10 years ago

10.3390/vaccines8020228

Identifying Suspect Bat Reservoirs of Emerging Infections
Cited by: 17
Author(s): Daniel Crowley, Daniel J. Becker, Alex D. Washburne, Raina K. Plowright
Software Mentions: 4
Published: about 6 years ago

10.1038/s42003-020-0891-7

Chytrid fungi distribution and co-occurrence with diatoms correlate with sea ice melt in the Arctic Ocean
Cited by: 25
Author(s): Estelle Kilias, Leandro Junges, Luka Šupraha, Guy Leonard, Katja Metfies, Thomas A. Richards
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.4861

Living on the edge: Exploring the role of coastal refugia in the Alexander Archipelago of Alaska
Cited by: 15
Author(s): Yadéeh E. Sawyer, Stephen O. MacDonald, Enrique P. Lessa, Joseph A. Cook
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.3161

Cryptic lineage divergence in marine environments: genetic differentiation at multiple spatial and temporal scales in the widespread intertidal goby<i>Gobiosoma bosc</i>
Cited by: 23
Author(s): Borja Milá, James L. Van Tassell, Jatziri A. Calderón, Lukas Rüber, Rafael Zardoya
Software Mentions: 4
Published: about 9 years ago

10.3389/fmicb.2015.01057

Specific microbial gene abundances and soil parameters contribute to C, N, and greenhouse gas process rates after land use change in Southern Amazonian Soils
Cited by: 75
Author(s): Daniel R. Lammel, Brigitte Josefine Feigl, Carlos C. Cerri, Klaus Nüsslein
Software Mentions: 4
Published: almost 11 years ago

10.1128/mSphere.00245-21

Collateral Sensitivity to β-Lactam Drugs in Drug-Resistant Tuberculosis Is Driven by the Transcriptional Wiring of BlaI Operon Genes
Cited by: 2
Author(s): Anna S Trigos, Benjamin Goudey, Justin Bedő, Thomas Conway, Noel Faux, Kelly L. Wyres
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0226619

Lowbush blueberry fruit yield and growth response to inorganic and organic N-fertilization when competing with two common weed species
Cited by: 6
Author(s): Charles Marty, Josée-Anne Lévesque, Robert L. Bradley, Jean Lafond, Maxime C. Paré
Software Mentions: 4
Published: over 6 years ago

10.1111/jbi.13525

Ancestral range reconstruction of remote oceanic island species of <i>Plantago</i> (Plantaginaceae) reveals differing scales and modes of dispersal
Cited by: 20
Author(s): Natalie Iwanycki Ahlstrand, Brecht Verstraete, Gustavo Hassemer, Stephanie Dunbar-Co, Ronald K. Hoggard, Heidi M. Meudt, Nina Rønsted
Software Mentions: 4
Published: over 7 years ago

10.1111/jeb.12022

Loss of genetic variability in social spiders: genetic and phylogenetic consequences of population subdivision and inbreeding
Cited by: 33
Author(s): Ingi Agnarsson, Leticia Avilés, Wayne P. Maddison
Software Mentions: 4
Published: over 13 years ago

10.3390/v12111304

Genetic and Antigenic Evolution of European Swine Influenza A Viruses of HA-1C (Avian-Like) and HA-1B (Human-Like) Lineages in France from 2000 to 2018
Cited by: 7
Author(s): Amélie Chastagner, Séverine Hervé, Stéphane Quéguiner, Edouard Hirchaud, Pierrick Lucas, Stéphane Gorin, Véronique Béven, Nicolas Barbier, Céline Deblanc, Yannick Blanchard, Gaëlle Simon
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0231142

Sex-based differences in movement and space use of the blacktip reef shark, Carcharhinus melanopterus
Cited by: 4
Author(s): Audrey M. Schlaff, Michelle R. Heupel, Vinay Udyawer, Colin A. Simpfendorfer
Software Mentions: 4
Published: over 6 years ago

10.1002/evl3.200

Herbivory and pollination impact on the evolution of herbivore-induced plasticity in defense and floral traits
Cited by: 6
Author(s): Sergio E. Ramos, Florian P. Schiestl
Software Mentions: 4
Published: over 5 years ago

10.1093/sysbio/syu052

Bayesian Species Delimitation Can Be Robust to Guide-Tree Inference Errors
Cited by: 52
Author(s): Chi Zhang, Bruce Rannala, Ziheng Yang
Software Mentions: 4
Published: almost 12 years ago

10.1099/vir.0.000035

Rapid evolution of the env gene leader sequence in cats naturally infected with feline immunodeficiency virus
Cited by: 9
Author(s): Paweł M. Bęczkowski, Joseph Hughes, Roman Biek, Annette Litster, Brian J. Willett, Margaret J. Hosie
Software Mentions: 4
Published: over 11 years ago

10.1099/vir.0.000062

Genetic characterization of human coxsackievirus A6 variants associated with atypical hand, foot and mouth disease: a potential role of recombination in emergence and pathogenicity
Cited by: 51
Author(s): Eleanor Gaunt, Heli Harvala, Riikka Österback, Vattipally B. Sreenu, Emma C. Thomson, Matti Waris, Peter Simmonds
Software Mentions: 4
Published: about 11 years ago

10.1371/journal.pone.0222272

Mortality, perception, and scale: Understanding how predation shapes space use in a wild prey population
Cited by: 6
Author(s): Lindsey N. Messinger, Erica F. Stuber, Christopher J. Chizinski, Joseph J. Fontaine
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12859-019-2637-4

CERENKOV2: improved detection of functional noncoding SNPs using data-space geometric features
Cited by: 4
Author(s): Yao Yao, Zheng Liu, Qi Wei, Stephen A. Ramsey
Software Mentions: 4
Published: over 7 years ago

10.1186/s13637-016-0044-y

A pedagogical walkthrough of computational modeling and simulation of Wnt signaling pathway using static causal models in MATLAB
Cited by: 2
Author(s): Shriprakash Sinha
Software Mentions: 4
Published: almost 10 years ago

10.1038/s41597-020-00792-9

A gridded establishment dataset as a proxy for economic activity in China
Cited by: 14
Author(s): Lei Dong, Xiaohui Yuan, Meng Li, Carlo Ratti, Yu Liu
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0251820

Embryonic developmental arrest in the annual killifish Austrolebias charrua: A proteomic approach to diapause III
Cited by: 5
Author(s): Cora Chalar, Graciela Clivio, Jimena Montagne, Alicia Costábile, Analı́a Lima, Nicolás Papa, Nora Berois, María José Arezo
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0160227

Analysis and Visualization Tool for Targeted Amplicon Bisulfite Sequencing on Ion Torrent Sequencers
Cited by: 19
Author(s): Stephan Pabinger, Karina Ernst, Walter Pulverer, Rainer Kallmeyer, Ana M. Valdes, Sarah Metrustry, Denis Katic, Angelo Nuzzo, Albert Kriegner, Klemens Vierlinger, Andreas Weinhaeusel
Software Mentions: 4
Published: about 10 years ago

10.1111/ele.12284

Correlated evolution in parental care in females but not males in response to selection on paternity assurance behaviour
Cited by: 32
Author(s): Megan L. Head, Camilla A. Hinde, Allen J. Moore, Nick J. Royle
Software Mentions: 4
Published: over 12 years ago

10.1016/j.dib.2018.11.034

Differential gene expression analysis and SNP/InDel marker discovery in resistant wild Asparagus kiusianus and susceptible A. officinalis in response to Phomopsis asparagi infection
Cited by: 4
Author(s): Mostafa Abdelrahman, Mai Mitoma, Takao Ikeuchi, Motoyuki Mori, Kyoko Murakami, Yukio Ozaki, Masaru Matsumoto, Atsuko Uragami, Akira Kanno
Software Mentions: 4
Published: over 7 years ago

10.1093/conphys/coaa086

Under cover of the night: context-dependency of anthropogenic disturbance on stress levels of wild roe deer Capreolus capreolus
Cited by: 15
Author(s): Jeffrey Carbillet, Benjamin Rey, Rupert Palme, Nicolas Morellet, Nadège C. Bonnot, Yannick Chaval, Bruno Cargnelutti, A. J. Mark Hewison, Emmanuelle Gilot‐Fromont, Hélène Verheyden
Software Mentions: 4
Published: over 6 years ago

10.1186/s13071-020-04538-9

Leeches as the intermediate host for strigeid trematodes: genetic diversity and taxonomy of the genera Australapatemon Sudarikov, 1959 and Cotylurus Szidat, 1928
Cited by: 6
Author(s): Ewa Pyrka, Gerard Kanarek, Grzegorz Zaleśny, Joanna Hildebrand
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.3827

Characterizing habitat suitability for a central‐place forager in a dynamic marine environment
Cited by: 20
Author(s): Dana K. Briscoe, Sabrina Fossette, Kylie L. Scales, Elliott L. Hazen, Steven J. Bograd, Sara M. Maxwell, Elizabeth A. McHuron, Patrick W. Robinson, Carey E. Kuhn, Daniel P. Costa, Larry B. Crowder, Rebecca L. Lewison
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pgen.1007139

An efficient Bayesian meta-analysis approach for studying cross-phenotype genetic associations
Cited by: 40
Author(s): Årindam Majumdar, Tanushree Haldar, Sourabh Bhattacharya, John S. Witte
Software Mentions: 4
Published: over 8 years ago