Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.12688/f1000research.18676.1

https://doi.org/10.12688/f1000research.18676.1

pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive

Cited by: 23
Author(s): Saket Choudhary
Published: over 5 years ago

Software Mentions 4

bioconductor: SRAdb
A compilation of metadata from NCBI SRA and tools
Papers that mentioned: 20
pypi: download
A quick module to help downloading files using python.
Papers that mentioned: 4
pypi: pysradb
A Python package for interacting with SRAdb and downloading datasets from SRA/ENA/GEO
Papers that mentioned: 4
pypi: wget
pure python download utility
Papers that mentioned: 43