Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.9422

https://doi.org/10.7717/peerj.9422

An RNA-sequencing-based transcriptome for a significantly prognostic novel driver signature identification in bladder urothelial carcinoma

Cited by: 6
Author(s): Danqi Liu, Boting Zhou, Rangru Liu
Published: over 4 years ago

Software Mentions 5

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: rbsurv
Robust likelihood-based survival modeling with microarray data
Papers that mentioned: 22
cran: pROC
Display and Analyze ROC Curves
Papers that mentioned: 1,740
cran: randomForestSRC
Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC)
Papers that mentioned: 143
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893