Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.40757

https://doi.org/10.7554/eLife.40757

Cited by: 24
Author(s): Yingying Zhang, Jocelyn Charlton, Rahul Karnik, Isabel Beerman, Zachary D. Smith, Hongcang Gu, Patrick Boyle, Xiaoli Mi, Kendell Clement, Ramona Pop, Andreas Gnirke, Derrick J. Rossi, Alexander Meissner
Published: over 5 years ago

Software Mentions 9

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: rpart
Recursive Partitioning and Regression Trees
Papers that mentioned: 431
cran: xgboost
Extreme Gradient Boosting
Papers that mentioned: 207
pypi: browser
A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125
pypi: glm
glm Python library
Papers that mentioned: 190
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: xgboost
XGBoost Python Package
Papers that mentioned: 207