Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/mps4020028

https://doi.org/10.3390/mps4020028

The Transcriptome of SH-SY5Y at Single-Cell Resolution: A CITE-Seq Data Analysis Workflow

Cited by: 2
Author(s): Daniele Mercatelli, Nicola Balboni, Francesca De Giorgio, Emanuela Aleo, Caterina Garone, Federico M. Giorgi
Published: over 3 years ago

Software Mentions 9

bioconductor: monocle
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Papers that mentioned: 60
bioconductor: slalom
Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data
Papers that mentioned: 1
cran: corto
Inference of Gene Regulatory Networks
Papers that mentioned: 3
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: spathial
Evolutionary Analysis
Papers that mentioned: 1
pypi: corto
Python binding for Corto
Papers that mentioned: 3
pypi: monocle
An async programming framework with a blocking look-alike syntax
Papers that mentioned: 60
pypi: slalom

Papers that mentioned: 1
pypi: vignette
Library to create FreeDesktop-compatible thumbnails
Papers that mentioned: 7