Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3390/jcm9041055
https://doi.org/10.3390/jcm9041055
Whole-Genome DNA Methylation Profiling of CD14+ Monocytes Reveals Disease Status and Activity Differences in Crohn’s Disease Patients
Cited by: 12
Author(s): Andrew Y. Li Yim, Nicolette W. Duijvis, Mohammed Ghiboub, Catriona Sharp, Enrico Ferrero, Marcel M.A.M. Mannens, Geert D’Haens, Wouter J. de Jonge, Anje A. te Velde, Peter Henneman
Published: over 4 years ago
Software Mentions 11
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: DMRcate
Methylation array and sequencing spatial analysis methodsPapers that mentioned: 132
bioconductor: EmpiricalBrownsMethod
Uses Brown's method to combine p-values from dependent testsPapers that mentioned: 1
bioconductor: MethylAid
Visual and interactive quality control of large Illumina DNA Methylation array data setsPapers that mentioned: 28
bioconductor: shinyMethyl
Interactive visualization for Illumina methylation arraysPapers that mentioned: 18
pypi: environment
This library provides parsing and validation of environment variables.Papers that mentioned: 569