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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.3390/ijms221910302

https://doi.org/10.3390/ijms221910302

The Impact of m1A Methylation Modification Patterns on Tumor Immune Microenvironment and Prognosis in Oral Squamous Cell Carcinoma

Cited by: 17
Author(s): Li Gao, Ru Chen, Masahiro Sugimoto, Masanobu Mizuta, Yo Kishimoto, Koichi Omori
Published: almost 4 years ago

Software Mentions 11

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
Very Likely Science (75)
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: maftools
Summarize, Analyze and Visualize MAF Files
Papers that mentioned: 288
Very Likely Science (100)
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
Very Likely Science (100)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
Very Likely Science (75)
cran: RCircos
Circos 2D Track Plot
Papers that mentioned: 74
Very Likely Science (75)
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
Very Likely Science (75)
pypi: gene
gene
Papers that mentioned: 185
Very Likely Science (65)
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
Very Likely Science (100)