Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3390/genes12030352
https://doi.org/10.3390/genes12030352
Temporal Dynamic Methods for Bulk RNA-Seq Time Series Data
Cited by: 10
Author(s): Vera-Khlara S. Oh, Robert W. Li
Published: over 3 years ago
Software Mentions 12
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: Harman
The removal of batch effects from datasets using a PCA and constrained optimisation based techniquePapers that mentioned: 10
bioconductor: maSigPro
Significant Gene Expression Profile Differences in Time Course Gene Expression DataPapers that mentioned: 119
bioconductor: splineTimeR
Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstructionPapers that mentioned: 3