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Papers: 10.3390/genes11050532

https://doi.org/10.3390/genes11050532

Sparsity-Penalized Stacked Denoising Autoencoders for Imputing Single-Cell RNA-seq Data

Cited by: 9
Author(s): Weilai Chi, Minghua Deng
Published: over 6 years ago

Software Mentions 9

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: Linnorm
Linear model and normality based normalization and transformation method (Linnorm)
Papers that mentioned: 11
Very Likely Science (98)
bioconductor: scone
Single Cell Overview of Normalized Expression data
Papers that mentioned: 5
Very Likely Science (100)
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
Very Likely Science (100)
cran: DCA
Dynamic Correlation Analysis for High Dimensional Data
Papers that mentioned: 128
Very Likely Science (93)
cran: SAVER
Single-Cell RNA-Seq Gene Expression Recovery
Papers that mentioned: 40
Very Likely Science (100)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
pypi: DCA
Count autoencoder for scRNA-seq denoising
Papers that mentioned: 128
Very Likely Science (100)
pypi: scone
Simple CONfiguration Engine
Papers that mentioned: 5
Very Likely Science (65)