Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers13123089

https://doi.org/10.3390/cancers13123089

A Comprehensive Bioinformatics Analysis of Notch Pathways in Bladder Cancer

Cited by: 12
Author(s): Chuan Zhang, Mandy Berndt‐Paetz, Jochen Neuhaus
Published: over 3 years ago

Software Mentions 15

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: circlize
Circular Visualization
Papers that mentioned: 260
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: pROC
Display and Analyze ROC Curves
Papers that mentioned: 1,740
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
cran: survMisc
Miscellaneous Functions for Survival Data
Papers that mentioned: 34
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690